View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850_low_47 (Length: 320)
Name: NF7850_low_47
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 307
Target Start/End: Original strand, 35448477 - 35448766
Alignment:
| Q |
18 |
atcagtactggttatgattaatccaaaataagctttgaacattttatttaaacgcgcacattgacccacagaaacacaagagagaggacataccagaaaa |
117 |
Q |
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| T |
35448477 |
atcagtactggttatgattaatccaaactaagctttgaacattttatttaaacatgcacattgacccacagaaacacaagagagaggacataccagaaaa |
35448576 |
T |
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| Q |
118 |
cagagaaacaagatccggaaagctagaacaaatgtttagaaaatccataactgcttcattgtcagaatctgagttggactcgacaccagagattggcata |
217 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
35448577 |
cagagaaacaagatccggaaagctagaacaagtgtttagaaaatccataactgcttcattgtcagaatctgagttggactcgataccagagattggcata |
35448676 |
T |
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| Q |
218 |
gctgaagcatcgcggacatttgagccggtctccacggcatttctatcagcaccagacatgtgaggaaaacttgaatattcaggttgtact |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35448677 |
gctgaagcatcgcggacatttgagccggtctccacggcatttctatcagcaccagacatgtgaggaaaacttgaatattcaggttgtact |
35448766 |
T |
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