View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850_low_53 (Length: 302)

Name: NF7850_low_53
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850_low_53
NF7850_low_53
[»] chr6 (21 HSPs)
chr6 (115-292)||(18024844-18025022)
chr6 (120-292)||(8525960-8526134)
chr6 (118-292)||(31090440-31090617)
chr6 (120-292)||(5715594-5715767)
chr6 (121-292)||(29622573-29622746)
chr6 (121-292)||(6926557-6926730)
chr6 (121-292)||(13444432-13444604)
chr6 (178-292)||(29880681-29880797)
chr6 (118-290)||(34084953-34085127)
chr6 (178-289)||(11368089-11368202)
chr6 (153-244)||(3095245-3095336)
chr6 (122-283)||(32172898-32173060)
chr6 (124-256)||(7082237-7082371)
chr6 (118-249)||(34084698-34084830)
chr6 (124-234)||(6675095-6675206)
chr6 (118-242)||(13889304-13889428)
chr6 (153-242)||(6626033-6626123)
chr6 (153-242)||(18894444-18894534)
chr6 (124-198)||(33104953-33105027)
chr6 (214-278)||(17314983-17315048)
chr6 (205-256)||(8810068-8810119)
[»] chr8 (50 HSPs)
chr8 (120-292)||(38167679-38167853)
chr8 (116-292)||(38459203-38459381)
chr8 (121-292)||(35328940-35329113)
chr8 (126-292)||(31792912-31793080)
chr8 (153-292)||(39713340-39713481)
chr8 (121-292)||(4006522-4006695)
chr8 (121-291)||(6338-6510)
chr8 (121-292)||(42687051-42687224)
chr8 (115-292)||(28152141-28152318)
chr8 (178-292)||(44025459-44025574)
chr8 (120-284)||(33772051-33772217)
chr8 (121-292)||(38946553-38946726)
chr8 (178-292)||(44026347-44026463)
chr8 (120-292)||(5346745-5346919)
chr8 (125-292)||(44703907-44704076)
chr8 (119-292)||(41941231-41941406)
chr8 (120-292)||(4230144-4230318)
chr8 (141-292)||(44696317-44696469)
chr8 (121-292)||(36056822-36056994)
chr8 (183-292)||(11266883-11266995)
chr8 (116-238)||(2827518-2827641)
chr8 (216-286)||(12723189-12723260)
chr8 (216-292)||(38235191-38235268)
chr8 (122-244)||(3136495-3136618)
chr8 (182-240)||(43576085-43576144)
chr8 (153-242)||(15840494-15840584)
chr8 (153-242)||(34918137-34918227)
chr8 (153-242)||(37578924-37579014)
chr8 (154-267)||(40184690-40184804)
chr8 (120-244)||(12713388-12713513)
chr8 (153-242)||(11588801-11588891)
chr8 (153-221)||(43663634-43663703)
chr8 (153-244)||(26294442-26294534)
chr8 (153-244)||(26307699-26307791)
chr8 (182-256)||(35979329-35979404)
chr8 (153-242)||(17602348-17602438)
chr8 (120-221)||(28910677-28910779)
chr8 (153-242)||(39365983-39366073)
chr8 (201-265)||(1848320-1848385)
chr8 (121-221)||(28884678-28884779)
chr8 (201-265)||(32911120-32911184)
chr8 (161-242)||(5599184-5599266)
chr8 (161-242)||(5636009-5636091)
chr8 (153-242)||(26290062-26290152)
chr8 (153-242)||(26303319-26303409)
chr8 (153-242)||(26315313-26315403)
chr8 (153-214)||(16633828-16633889)
chr8 (178-242)||(23356610-23356675)
chr8 (121-221)||(24821985-24822086)
chr8 (183-242)||(42512884-42512944)
[»] chr7 (44 HSPs)
chr7 (121-292)||(47541105-47541279)
chr7 (121-292)||(20493505-20493679)
chr7 (118-292)||(7883076-7883252)
chr7 (121-292)||(242316-242489)
chr7 (121-292)||(47011126-47011299)
chr7 (121-292)||(12846641-12846814)
chr7 (181-292)||(40863189-40863302)
chr7 (121-290)||(42435615-42435786)
chr7 (121-292)||(39596931-39597105)
chr7 (121-292)||(19474988-19475161)
chr7 (117-292)||(29042698-29042874)
chr7 (142-284)||(40304802-40304944)
chr7 (120-292)||(30172814-30172991)
chr7 (124-292)||(46102507-46102673)
chr7 (178-292)||(48873693-48873809)
chr7 (121-292)||(36687916-36688090)
chr7 (121-292)||(10594816-10594989)
chr7 (178-292)||(25226249-25226364)
chr7 (178-292)||(25236081-25236196)
chr7 (178-292)||(43777099-43777215)
chr7 (201-292)||(45869554-45869646)
chr7 (121-292)||(24981659-24981832)
chr7 (117-292)||(48613640-48613817)
chr7 (118-244)||(47778764-47778891)
chr7 (216-292)||(43501497-43501574)
chr7 (124-267)||(37544927-37545070)
chr7 (183-266)||(41469463-41469547)
chr7 (142-244)||(19020477-19020580)
chr7 (153-244)||(25877503-25877595)
chr7 (153-221)||(21873790-21873859)
chr7 (118-292)||(44709175-44709352)
chr7 (153-244)||(38282960-38283052)
chr7 (153-242)||(8214958-8215048)
chr7 (183-292)||(25765616-25765726)
chr7 (153-242)||(39073685-39073775)
chr7 (153-244)||(21278297-21278389)
chr7 (153-242)||(7791579-7791669)
chr7 (154-242)||(42094796-42094885)
chr7 (120-242)||(27325565-27325687)
chr7 (153-242)||(35924830-35924920)
chr7 (153-242)||(40995888-40995977)
chr7 (118-242)||(10533341-10533466)
chr7 (153-221)||(32661614-32661683)
chr7 (122-221)||(48642587-48642688)
[»] chr1 (49 HSPs)
chr1 (121-292)||(24526913-24527088)
chr1 (122-292)||(32562172-32562344)
chr1 (121-292)||(7009709-7009882)
chr1 (121-292)||(51001186-51001359)
chr1 (121-292)||(8113027-8113200)
chr1 (127-292)||(24663499-24663665)
chr1 (121-292)||(29921041-29921214)
chr1 (178-292)||(13073859-13073975)
chr1 (178-292)||(17475132-17475248)
chr1 (201-292)||(32117308-32117400)
chr1 (183-292)||(9639962-9640073)
chr1 (183-292)||(26308323-26308434)
chr1 (178-292)||(6015825-6015941)
chr1 (142-292)||(46290899-46291049)
chr1 (201-292)||(48934035-48934127)
chr1 (120-292)||(45942185-45942359)
chr1 (121-292)||(3486432-3486605)
chr1 (121-292)||(17702746-17702918)
chr1 (178-292)||(19513428-19513544)
chr1 (178-292)||(23443508-23443624)
chr1 (186-292)||(40499289-40499397)
chr1 (178-292)||(12602657-12602772)
chr1 (216-292)||(32087233-32087310)
chr1 (216-292)||(41713587-41713664)
chr1 (201-292)||(5673618-5673710)
chr1 (140-283)||(1701325-1701467)
chr1 (121-292)||(35274583-35274757)
chr1 (216-292)||(1702555-1702632)
chr1 (178-292)||(19247111-19247227)
chr1 (121-244)||(40400723-40400847)
chr1 (121-242)||(18909874-18909996)
chr1 (118-242)||(15941543-15941668)
chr1 (153-242)||(11172648-11172738)
chr1 (153-242)||(13234624-13234714)
chr1 (153-242)||(40535951-40536041)
chr1 (216-265)||(14289553-14289602)
chr1 (153-242)||(2481955-2482045)
chr1 (201-255)||(9263562-9263616)
chr1 (121-242)||(39983070-39983191)
chr1 (121-242)||(42948890-42949012)
chr1 (153-213)||(20582324-20582385)
chr1 (118-242)||(44722605-44722730)
chr1 (121-221)||(49823920-49824021)
chr1 (118-218)||(52043664-52043764)
chr1 (120-242)||(34270033-34270156)
chr1 (120-242)||(34276268-34276391)
chr1 (153-242)||(2137664-2137754)
chr1 (153-242)||(33010011-33010101)
chr1 (153-221)||(14246544-14246613)
[»] chr4 (48 HSPs)
chr4 (120-292)||(11691643-11691817)
chr4 (119-292)||(32136165-32136340)
chr4 (121-290)||(8713911-8714082)
chr4 (116-292)||(24035279-24035457)
chr4 (121-292)||(3025480-3025653)
chr4 (124-292)||(3027261-3027431)
chr4 (121-292)||(13961549-13961721)
chr4 (121-292)||(32933439-32933612)
chr4 (119-292)||(10480489-10480664)
chr4 (120-292)||(24897602-24897776)
chr4 (121-292)||(34160144-34160317)
chr4 (121-292)||(43457469-43457642)
chr4 (178-292)||(1523612-1523728)
chr4 (124-292)||(30214974-30215144)
chr4 (120-284)||(37829692-37829857)
chr4 (151-292)||(37682501-37682645)
chr4 (178-292)||(43620877-43620993)
chr4 (121-292)||(50469814-50469986)
chr4 (123-292)||(48515-48686)
chr4 (183-292)||(35338867-35338978)
chr4 (204-292)||(36852484-36852573)
chr4 (201-292)||(51323304-51323396)
chr4 (178-287)||(47428960-47429071)
chr4 (120-290)||(47466621-47466794)
chr4 (137-267)||(15506518-15506649)
chr4 (121-290)||(20292489-20292660)
chr4 (216-292)||(7318947-7319024)
chr4 (178-292)||(22847764-22847880)
chr4 (121-292)||(40431058-40431231)
chr4 (216-292)||(41201618-41201695)
chr4 (178-262)||(51320630-51320715)
chr4 (121-244)||(1356318-1356442)
chr4 (119-292)||(48991196-48991363)
chr4 (120-242)||(42349400-42349523)
chr4 (153-244)||(10541412-10541505)
chr4 (153-242)||(37233470-37233560)
chr4 (154-242)||(56363403-56363492)
chr4 (120-239)||(56017713-56017833)
chr4 (201-267)||(1536901-1536967)
chr4 (153-242)||(20738447-20738536)
chr4 (153-242)||(23894493-23894583)
chr4 (119-242)||(43829519-43829642)
chr4 (120-242)||(55182792-55182915)
chr4 (153-242)||(5098729-5098819)
chr4 (116-221)||(55214864-55214970)
chr4 (153-221)||(25858362-25858431)
chr4 (201-242)||(53874391-53874432)
chr4 (153-221)||(55220588-55220657)
[»] chr3 (45 HSPs)
chr3 (121-292)||(48585439-48585612)
chr3 (118-292)||(41589494-41589670)
chr3 (122-292)||(19942393-19942565)
chr3 (178-292)||(38144399-38144515)
chr3 (121-292)||(36231752-36231925)
chr3 (120-292)||(52813743-52813916)
chr3 (121-290)||(2612423-2612594)
chr3 (121-292)||(7680323-7680496)
chr3 (121-292)||(28412061-28412234)
chr3 (121-292)||(52343588-52343760)
chr3 (178-292)||(49779022-49779138)
chr3 (178-292)||(24200263-24200379)
chr3 (121-292)||(4595649-4595821)
chr3 (121-292)||(30419496-30419669)
chr3 (201-292)||(35232916-35233008)
chr3 (120-292)||(44353487-44353662)
chr3 (121-244)||(20049007-20049131)
chr3 (119-292)||(36835394-36835565)
chr3 (141-244)||(8947085-8947189)
chr3 (178-292)||(14279665-14279781)
chr3 (153-265)||(33393234-33393346)
chr3 (121-244)||(54556945-54557069)
chr3 (153-244)||(40585421-40585512)
chr3 (191-256)||(23483274-23483340)
chr3 (185-292)||(35154943-35155051)
chr3 (153-240)||(26091048-26091136)
chr3 (120-221)||(7678652-7678754)
chr3 (121-242)||(36431016-36431138)
chr3 (117-221)||(20656515-20656620)
chr3 (118-242)||(22781071-22781196)
chr3 (149-221)||(24395920-24395993)
chr3 (118-221)||(32237021-32237125)
chr3 (120-242)||(7149231-7149354)
chr3 (121-242)||(10840659-10840781)
chr3 (121-242)||(38871825-38871947)
chr3 (121-242)||(41070584-41070706)
chr3 (121-221)||(85354-85455)
chr3 (121-242)||(39626094-39626217)
chr3 (153-242)||(25711628-25711718)
chr3 (205-267)||(31608325-31608387)
chr3 (153-221)||(672785-672854)
chr3 (178-242)||(4515328-4515392)
chr3 (120-214)||(11124513-11124608)
chr3 (204-267)||(50507717-50507780)
chr3 (153-242)||(37970970-37971060)
[»] chr2 (29 HSPs)
chr2 (118-292)||(31639702-31639879)
chr2 (116-292)||(4072559-4072737)
chr2 (120-292)||(45442830-45443004)
chr2 (121-267)||(44799417-44799564)
chr2 (120-292)||(4330703-4330877)
chr2 (121-288)||(16312795-16312964)
chr2 (140-283)||(10554159-10554304)
chr2 (121-292)||(44456016-44456189)
chr2 (178-292)||(13479697-13479813)
chr2 (120-292)||(8033935-8034108)
chr2 (178-290)||(38628296-38628410)
chr2 (120-292)||(10522360-10522533)
chr2 (178-292)||(7721769-7721881)
chr2 (121-242)||(32550875-32550997)
chr2 (116-242)||(35896455-35896582)
chr2 (121-214)||(31568889-31568983)
chr2 (121-242)||(37094763-37094885)
chr2 (153-221)||(1520939-1521008)
chr2 (153-244)||(10639434-10639526)
chr2 (153-242)||(25852682-25852772)
chr2 (246-292)||(40658597-40658644)
chr2 (121-242)||(1482566-1482688)
chr2 (239-292)||(26171850-26171904)
chr2 (118-242)||(43577632-43577757)
chr2 (118-242)||(927698-927822)
chr2 (153-221)||(39697108-39697177)
chr2 (181-252)||(932105-932177)
chr2 (115-242)||(15012492-15012619)
chr2 (227-278)||(35006383-35006435)
[»] chr5 (43 HSPs)
chr5 (121-292)||(6246041-6246214)
chr5 (121-292)||(41881003-41881176)
chr5 (115-292)||(27309710-27309889)
chr5 (121-292)||(10552976-10553149)
chr5 (118-292)||(18865357-18865533)
chr5 (178-292)||(40739950-40740066)
chr5 (115-265)||(36294684-36294835)
chr5 (121-292)||(4621974-4622146)
chr5 (153-292)||(7339601-7339742)
chr5 (120-292)||(38769080-38769257)
chr5 (118-284)||(13210167-13210335)
chr5 (201-292)||(24478210-24478302)
chr5 (178-292)||(37106806-37106922)
chr5 (121-292)||(10665285-10665459)
chr5 (121-292)||(18522792-18522965)
chr5 (121-292)||(37273922-37274095)
chr5 (178-292)||(15271885-15272001)
chr5 (124-287)||(12188499-12188664)
chr5 (216-292)||(37341623-37341700)
chr5 (121-284)||(31485445-31485611)
chr5 (121-292)||(42436455-42436628)
chr5 (219-292)||(43547814-43547888)
chr5 (216-292)||(8048053-8048130)
chr5 (121-292)||(18979255-18979428)
chr5 (217-292)||(8233360-8233436)
chr5 (153-244)||(43517587-43517679)
chr5 (118-242)||(6468963-6469088)
chr5 (125-267)||(3123507-3123651)
chr5 (124-245)||(29385515-29385637)
chr5 (121-234)||(15021205-15021319)
chr5 (120-221)||(19616874-19616976)
chr5 (153-221)||(24559805-24559874)
chr5 (120-242)||(19033977-19034100)
chr5 (178-244)||(31499651-31499718)
chr5 (160-221)||(29921163-29921225)
chr5 (211-256)||(6733442-6733487)
chr5 (153-221)||(24600838-24600906)
chr5 (154-242)||(38759690-38759779)
chr5 (251-292)||(31499615-31499657)
chr5 (153-242)||(31510739-31510828)
chr5 (178-242)||(4155464-4155529)
chr5 (121-197)||(43149271-43149347)
chr5 (119-242)||(43292944-43293068)
[»] scaffold0007 (1 HSPs)
scaffold0007 (121-280)||(200653-200813)
[»] scaffold0672 (1 HSPs)
scaffold0672 (121-292)||(6788-6961)
[»] scaffold0855 (1 HSPs)
scaffold0855 (178-292)||(53-169)
[»] scaffold0847 (1 HSPs)
scaffold0847 (178-292)||(218-334)
[»] scaffold0003 (1 HSPs)
scaffold0003 (118-284)||(365053-365219)
[»] scaffold0578 (1 HSPs)
scaffold0578 (178-292)||(9394-9510)
[»] scaffold0065 (1 HSPs)
scaffold0065 (121-221)||(37355-37456)
[»] scaffold0570 (1 HSPs)
scaffold0570 (191-265)||(3774-3849)
[»] scaffold0368 (1 HSPs)
scaffold0368 (121-242)||(14563-14685)
[»] scaffold0391 (1 HSPs)
scaffold0391 (119-242)||(4712-4837)
[»] scaffold0062 (1 HSPs)
scaffold0062 (120-242)||(41227-41350)
[»] scaffold0438 (1 HSPs)
scaffold0438 (153-242)||(1399-1489)


Alignment Details
Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 18025022 - 18024844
Alignment:
Q  115 taatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattt 213  Q
    |||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  |||| |||||| |||    
T  18025022 taatttgaatttttctattcacatcccatatattttttgttacccccaaattttcttaaaacgttttaataataccaaaattgcccttttatataagttt 18024923  T
Q  214 tcttaaaattttgatttcattcattgtcactataaaatttcactctctttcaccacaaacgatcaaacaatcctgatgt 292  Q
    | ||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  18024922 ttttaaaatcttgatttcattcactgtcactctaaaatttcactctctttcatcacaaacgatcaaacaatcctgatgt 18024844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 8526134 - 8525960
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| ||| ||||||||||| |||| | |     |||| |||||||||||||||| |||| |||||||||||||||    
T  8526134 tgagtttttctattcacaccctatatatttttggttacacccaatttttaaaatttttttttgataataccaaaattgtccttttatataaattttctta 8526035  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| || |||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  8526034 aaatattaatttcattcattgtcactctaaaatttcactctctttcacccatcaacgatcaaacaatcctgatgt 8525960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 292
Target Start/End: Original strand, 31090440 - 31090617
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttc 215  Q
    |||||||||||||||||| | || |||||| | | |||||| |||  ||||  ||||| |||||  |||||||||||||||| |||| ||||||||||||    
T  31090440 tttgagtttttctattcacaccctatatatttctggttacatccagttttttttaaaaagtttttgataataccaaaattgtccttttatataaattttc 31090539  T
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  31090540 ttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaactatcaaacaatcctgatgt 31090617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 5715767 - 5715594
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttctta 218  Q
    ||||||||||||||||   || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| | ||||||||||||||||||    
T  5715767 tgagtttttctattcacgccctatatatttctggttacacccagtttttttaaaaagttttttataataccaaaattgtctttttatataaattttctta 5715668  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  5715667 aaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaac-atcaaacaatcctgatgt 5715594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 29622573 - 29622746
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | |  ||||||| || ||||   ||||  |||| |||||| ||||||||| |||| ||||||||||||||||    
T  29622573 gagtttttctattcacaccctatatatttctgattacacctaatttttttaaaaagtttttgataatatcaaaattgtccttttatataaattttcttaa 29622672  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||| ||||||    
T  29622673 aatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgt 29622746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 6926730 - 6926557
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | |  |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| | ||||| ||| ||||    
T  6926730 gagtttttctattcacaccttatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttagataaaattttttaa 6926631  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||||||||    
T  6926630 aatcttgatttcattcattgtcactctaaaattccactctctttcacctaccaacgatcaaacaatcctgatgt 6926557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 13444432 - 13444604
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaattttcttaaa 220  Q
    |||||||| |||||| | || |||||| | | |||||| |||| ||||   ||||  |||| |||||||||||||||| ||||||||||||||  |||||    
T  13444432 gagtttttttattcacaccctatatatttctggttacatccaatttttttaaaaagtttttgataataccaaaattgtcctttatataaatttatttaaa 13444531  T
Q  221 attttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    || ||||||||  ||||||||| | |||||||||||||||||||| |||| || |||||||||||||||||||    
T  13444532 atcttgatttcggtcattgtcaatctaaaatttcactctctttcatccaccaaggatcaaacaatcctgatgt 13444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 29880681 - 29880797
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||| || ||||||||| |||  |||||    
T  29880681 ttttgataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattaattgtcactctaaaattccattctctttcacccatcaacga 29880780  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  29880781 tcaaacaatcctgatgt 29880797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 290
Target Start/End: Original strand, 34084953 - 34085127
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaa-attttcataaaacgttttaataataccaaaattgttcttt-atataaattttc 215  Q
    |||||||||||||||||| | || |||||| | | ||||||||||  ||||| | ||||  |||| |||||| ||||||||| |||| |||||| ||||     
T  34084953 tttgagtttttctattcacaccctatatatttctggttacacccagtattttta-aaaagtttttgataatatcaaaattgtccttttatataatttttt 34085051  T
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttcac-cacaaacgatcaaacaatcctgat 290  Q
    ||||||| ||||||||||||||| ||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  34085052 ttaaaatcttgatttcattcattctcactctaaaattccactctctttcacacaccaacgatcaaacaatcctgat 34085127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 11368089 - 11368202
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| |||  || ||    
T  11368089 ttttaataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccatcaatga 11368188  T
Q  276 tcaaacaatcctga 289  Q
    ||||||||||||||    
T  11368189 tcaaacaatcctga 11368202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 3095336 - 3095245
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| |||||||||||||||||||||||  | |||| |||||||||||||    
T  3095336 gttacacccaaattttcttaaaatttttttataataccaaaattgtcctttatataaattttcttaaaatcctaattttattcattgtcact 3095245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 32172898 - 32173060
Alignment:
Q  122 agtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaattttcttaaaa 221  Q
    |||||||||||||| | |  |||||| | | |||||| | |||||||| |||||  |||| | |||| |||||||    |||||||||||| |||||| |    
T  32172898 agtttttctattcacaccttatatatttctggttacatctaaattttcttaaaagtttttgaaaatatcaaaatttccttttatataaattatcttaata 32172997  T
Q  222 ttttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaa 283  Q
    | ||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||    
T  32172998 tcttgatttcattcattgtcactctaaaatttcactctctttcacccagaaacaatcaaacaa 32173060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 7082371 - 7082237
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacc-caaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaa 221  Q
    |||||||||||| | ||||||||| |||||||| ||| ||||||| | |||||  ||  |||||||| |||||||| | ||||||||||||||||||||     
T  7082371 tttttctattcacaccccatatattttttgttaaacctcaaatttacttaaaagtttacaataatacaaaaattgtctttttatataaattttcttaaag 7082272  T
Q  222 ttttgatttcattcattgtcactataaaatttcac 256  Q
      ||||||||||||| || |||| |||||||||||    
T  7082271 ccttgatttcattcaatgccactctaaaatttcac 7082237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 34084698 - 34084830
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||||| | || |||||| | | |||||||| |  ||||  |||||  |||| |||||| ||||||||| |||| ||||||||||| |    
T  34084698 tttgagtttttctattcacaccctatatatttctggttacaccaagttttttttaaaagtttttgataatatcaaaattgtccttttatataaatttttt 34084797  T
Q  217 taaaattttgatttcattcattgtcactataaa 249  Q
    |||||| ||||||||||||||| ||||| ||||    
T  34084798 taaaatcttgatttcattcattctcactctaaa 34084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 6675095 - 6675206
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaaaat 222  Q
    |||||||||||||| ||||| ||| | | |||||||| |||||| | |||||  || ||||||||| |||||||  | |||||||||||| |||||||||    
T  6675095 tttttctattcataccccatgtatttctggttacaccaaaatttacttaaaagtttataataatactaaaattgcctttttatataaattatcttaaaat 6675194  T
Q  223 tttgatttcatt 234  Q
     |||||||||||    
T  6675195 cttgatttcatt 6675206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 13889304 - 13889428
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| ||||   ||||| ||||||||||||||  |||| |||||||||||||    
T  13889304 tttgagtttttctatttacaccccatgtttttctagttacacccaaattttcttaaattttttta-taataccaaaattgcccttttatataaattttct 13889402  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    ||||||  | |||| |||||||||||    
T  13889403 taaaatcctaattttattcattgtca 13889428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 6626123 - 6626033
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   |||| |||||| ||||||||  |||| ||||||||||||||||||  || |||| |||||||||||    
T  6626123 gttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaattttcttaaaaccttaattttattcattgtca 6626033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 18894534 - 18894444
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||   ||| |||||| ||||||||  |||| |||||||||||||||||||  | |||| |||||||||||    
T  18894534 gttacacccaaattttcttaaaaaaattttataatatcaaaattgcccttttatataaattttcttaaaatcctaattttattcattgtca 18894444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 33104953 - 33105027
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt 198  Q
    |||||||||||| | ||||||||| ||| ||||||||||||||||| ||||   |||| ||||||| ||||||||    
T  33104953 tttttctattcacaccccatatatttttggttacacccaaattttcttaaacgttttttataatacaaaaattgt 33105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 17315048 - 17314983
Alignment:
Q  214 tcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatca 278  Q
    ||||||||| || |||||||| ||||| ||| |||||||||||||||||||| |||||||| ||||    
T  17315048 tcttaaaatcttaatttcatttattgttactctaaaatttcactctctttcagccacaaacaatca 17314983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 8810068 - 8810119
Alignment:
Q  205 tataaattttcttaaaattttgatttcattcattgtcactataaaatttcac 256  Q
    ||||||||||||||||   ||||||||||||| ||||||| |||||||||||    
T  8810068 tataaattttcttaaagccttgatttcattcaatgtcactctaaaatttcac 8810119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 7e-49; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 38167679 - 38167853
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttctta 218  Q
    |||||||||||||||| |||| |||||| |||| |||||||||  |||| | ||||  |||| |||||||||||||||| ||||| ||||||||||||||    
T  38167679 tgagtttttctattcacatcctatatattttttattacacccagttttttaaaaaagtttttgataataccaaaattgtcctttaatataaattttctta 38167778  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  38167779 aaaatttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 38167853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 38459203 - 38459381
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaatttt 214  Q
    |||||||||||||||||||| | || |||||| ||| ||||||||||  ||||  |||||  |||| ||||||| |||||||| |||| |||||||||||    
T  38459203 aatttgagtttttctattcacaccctatatatttttggttacacccagttttttttaaaagtttttgataatactaaaattgtccttttatataaatttt 38459302  T
Q  215 cttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  38459303 cttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 38459381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 35328940 - 35329113
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| || | |||||| |||  ||||||| || |||| | ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  35328940 gagtttttctattcacattctatatatttttgattacacctaattttttaaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 35329039  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  35329040 aattttgatttcattcattgtcactctaaaatttcactttctttcacccaccaacgatcaaacaatcctgatgt 35329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 292
Target Start/End: Original strand, 31792912 - 31793080
Alignment:
Q  126 tttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattt 224  Q
    |||||||||| |||| |||||| | | ||||||||||| ||||   ||||  |||| ||||| |||||||||| |||| ||||||||||||||||||| |    
T  31792912 tttctattcacatcctatatatttctggttacacccaatttttttaaaaagtttttgataatgccaaaattgtccttttatataaattttcttaaaatct 31793011  T
Q  225 tgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  31793012 tgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 31793080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 39713481 - 39713340
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaattttgatttcattcattgtcactataaaat 251  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||  | |||||||||||||||||||||| || |||||||| ||||||||| ||||||    
T  39713481 gttacacccaaattttcttaaaagtttttaataataccaaaattgcctttttatataaattttcttaaaatctttatttcattaattgtcactctaaaat 39713382  T
Q  252 ttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  39713381 ttcaatctctttcacccacaaacgatcaaacaatcatgatgt 39713340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 4006695 - 4006522
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||| ||    
T  4006695 gagtttttctattcacaccctatatatttctagttacacccaatttttttaaaaagtttttgataataccaaaattgtccttttatataaattttctgaa 4006596  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  4006595 aatcttgatttcattaattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcatgatgt 4006522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 6510 - 6338
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| |||||||||   ||||   ||||  |||| ||||||||||||||||  ||| ||||||||||||||||    
T  6510 gagtttttctattcacaaccaatatatttttggttacaccctgtttttttaaaaagtttttgataataccaaaattgtcattttatataaattttcttaa 6411  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatg 291  Q
    ||| | ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||    
T  6410 aatctggatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatg 6338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 42687051 - 42687224
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||| ||||  |||||  |||| |||||||||||||||| |||| | ||||||||| ||||    
T  42687051 gagtttttctattcacaccctatatatttatggttacacccaattttttttaaaagtttttgataataccaaaattgtccttttacataaattttattaa 42687150  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||  |||||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  42687151 aatcttgatttcattcattgtcacactaaaatttaactctctttcatccaccaacaatcaaacaatcctgatgt 42687224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 28152318 - 28152141
Alignment:
Q  115 taatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattt 213  Q
    ||||| ||||||||||||||| | || |||||| | | ||||||||||| ||||  | ||   |||| |||||||||||||||| |||| ||||||||||    
T  28152318 taattcgagtttttctattcacaccctatatatttctggttacacccaattttt--ttaattttttttataataccaaaattgtccttttatataaattt 28152221  T
Q  214 tcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||| ||| ||||||||||||| ||||    
T  28152220 tcttaaaattttgatttcattcattgttactctaaaattccactctctttcacccaccaacaatcaaacaatcctaatgt 28152141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 44025574 - 44025459
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  44025574 ttttgataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacga 44025475  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||| ||||||||||    
T  44025474 tcaaac-atcctgatgt 44025459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 284
Target Start/End: Complemental strand, 33772217 - 33772051
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| |||||||||||||||    
T  33772217 tgagtttttctattcacaccctatatatttctggttacacccaggttttttaaaaagtttttgataataccaaaattgtccttttatataaattttctta 33772118  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaat 284  Q
    |||| |||| |||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  33772117 aaatcttgacttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaat 33772051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 38946726 - 38946553
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| |||| | |||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  38946726 gagtttttctattcacaccctatatatttttggttatatccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 38946627  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||| ||||||    
T  38946626 aatcttgatttcattcattgtcactctaaaattccactttctttcacccactaacgatcaaacaatcttgatgt 38946553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 44026463 - 44026347
Alignment:
Q  178 ttttaataataccaaaattgt-tctttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| |||||    
T  44026463 ttttgataataccaaaattttctttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacga 44026364  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  44026363 tcaaacaatcttgatgt 44026347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 5346745 - 5346919
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| | | ||||||||| ||| |||| ||| |||||||| |||||  |||||| |||| ||||||||  |||| ||||||||| |||||    
T  5346745 tgagtttttctatttacaccccatatatttttggttatacctaaattttcttaaaagtttttaaaaatatcaaaattgcccttttatataaattatctta 5346844  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    | || ||||||||||||| ||||||||||||||| |||||||||||| ||  |||||||||| ||| ||||||||    
T  5346845 atatcttgatttcattcactgtcactataaaattccactctctttcaccctgaaacgatcaatcaaacctgatgt 5346919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 292
Target Start/End: Original strand, 44703907 - 44704076
Alignment:
Q  125 ttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaatt 223  Q
    ||||||||| | | || |||||| ||||||||||||||  ||||   |||   |||| ||||||  |||||||| |||| |||||||||||||||||||     
T  44703907 ttttctatttacaccctatatattttttgttacacccagtttttttaaaatttttttgataatattaaaattgtccttttatataaattttcttaaaatc 44704006  T
Q  224 ttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  44704007 ttgatttcattcattatcactctaaaatttcactctctttcacccaccaacgaccaaacaatcctgatgt 44704076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 41941231 - 41941406
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||||| | || |||||| | | ||||||||||| ||||  | ||   |||| |||||||||||||||| |||| ||||||||||| |     
T  41941231 ttgagtttttctattcacaccctatatatttctggttacacccaatttttttttaatttttttgataataccaaaattgtccttttatataaattttttg 41941330  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||| |||||||| ||| |||||||| ||||||| |||||||||||| |||  ||||||||||||||| ||||||    
T  41941331 aaaatcttgatttctttcgttgtcactctaaaattccactctctttcacccatcaacgatcaaacaatcatgatgt 41941406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 4230318 - 4230144
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| | | ||||||||| | ||||   ||||  |||| |||||||||||||||| |||| |||||||     |||    
T  4230318 tgagtttttctattcacaccctatatatttctggttacacccgatttttttaaaaagtttttgataataccaaaattgtccttttatataaaaaaaatta 4230219  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||| |||||||    
T  4230218 aaatattgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaattctgatgt 4230144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 292
Target Start/End: Complemental strand, 44696469 - 44696317
Alignment:
Q  141 catatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattg 239  Q
    ||||||| |||||||| |||||||||||| |||||  || | |||||||| |||||   |||| |||||||||||||||||| || ||||||||||||||    
T  44696469 catatattttttgttaaacccaaattttcttaaaagtttattataatacccaaattacccttttatataaattttcttaaaactt-gatttcattcattg 44696371  T
Q  240 tcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| | |||||||||||  | ||||| ||||||||||||||||||| |||||||    
T  44696370 tcattctaaaatttcaccatttttcacccacaaacgatcaaacaattctgatgt 44696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 36056822 - 36056994
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||  ||||| |||||  |||||||||||||||| |||| |||||||     |||    
T  36056822 gagtttttctattcacaccctatatatttctggttacacccagtttttt-taaaaggtttttgataataccaaaattgtccttttatataaaaaaa-tta 36056919  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  36056920 aaatcttgatttcattcattgtcacattaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 36056994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 292
Target Start/End: Complemental strand, 11266995 - 11266883
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttctt-aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaa 279  Q
    ||||||| |||||||| |||| |||||| |||| || ||||| || |||||||||||||||||| ||||||| ||||||| |||| |||| |||||||||    
T  11266995 ataatactaaaattgtccttttatataatttttttttaaaatcttaatttcattcattgtcactctaaaattccactctcattcacccaccaacgatcaa 11266896  T
Q  280 acaatcctgatgt 292  Q
    |||||||||||||    
T  11266895 acaatcctgatgt 11266883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 2827518 - 2827641
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaatttt 214  Q
    ||||||| |||||||||| | | ||||||||| ||| ||||||| ||||| ||  |||||  |||| || ||||||||||||| |||| ||||||||| |    
T  2827518 aatttgaatttttctatttacaccccatatatttttggttacactcaaatatttttaaaagttttttatgataccaaaattgtccttttatataaattct 2827617  T
Q  215 cttaaaattttgatttcattcatt 238  Q
    |||||||| |||||||||||||||    
T  2827618 cttaaaatcttgatttcattcatt 2827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 12723260 - 12723189
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacgatcaaacaatcc 286  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||    
T  12723260 ttaaaatcttgatttcattcattgtcactctaaaattccactctctttcaccgaccaacgatcaaacaatcc 12723189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 38235268 - 38235191
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| |||||||||||||||||| || ||||||| |||||||||||| |||| ||||||||||||||| ||||||    
T  38235268 ttaaaatcttgatttcattcattgtcgctctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgt 38235191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 3136495 - 3136618
Alignment:
Q  122 agtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaa 220  Q
    |||||||||||| | ||||||||| | ||  ||||||||||||||||| |||||  |||| |||||| ||||||||  | ||||||||||||||||||||    
T  3136495 agtttttctatttacatcccatattttttaggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaaa 3136594  T
Q  221 attttgatttcattcattgtcact 244  Q
    |   | |||| |||||||||||||    
T  3136595 accctaattttattcattgtcact 3136618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 43576085 - 43576144
Alignment:
Q  182 aataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgt 240  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  43576085 aataataccaaaattgttcttttatataaattttcttaaaaccttgatttcattcattgt 43576144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 15840584 - 15840494
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| ||||||||||||||| || |||||||||||||||||||||   | |||| |||||||||||    
T  15840584 gttacacccaaattttcttaaaagttttttataataccaaaattgcttttttatataaattttcttaaaaccctaattttattcattgtca 15840494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 34918227 - 34918137
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||   | |||| |||||||||||    
T  34918227 gttacacccaaattttcttaaaatttttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtca 34918137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 37579014 - 37578924
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||||||| | | |||| |||||||||||    
T  37579014 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaactctaattttattcattgtca 37578924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 40184804 - 40184690
Alignment:
Q  154 ttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaaaattttgatttcattcattgtcactataaaatt 252  Q
    |||||||||||||||| |||||  || |||||||||| ||||||    |||||||||||| ||||||||  || ||||||||||||| |||| |||||||    
T  40184804 ttacacccaaattttcttaaaagtttataataataccgaaattgccattttatataaattatcttaaaacctttatttcattcattgacactttaaaatt 40184705  T
Q  253 tcactctctttcacc 267  Q
     ||| ||||||||||    
T  40184704 ccaccctctttcacc 40184690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 12713388 - 12713513
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||| ||||||||| | ||||||||||||||||||    
T  12713388 tgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgtccttttatataaattttctta 12713487  T
Q  219 aaattttgatttcattcattgtcact 244  Q
    |||   | |||| |||||||||||||    
T  12713488 aaaccctaattttattcattgtcact 12713513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 11588891 - 11588801
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  11588891 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 11588801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 43663634 - 43663703
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    ||||||||||||||||| |||||  |||| |||||| |||||||| || |||||||||||||||||||||    
T  43663634 gttacacccaaattttcttaaaatttttttataatatcaaaattgctcttttatataaattttcttaaaa 43663703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 26294442 - 26294534
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||||    
T  26294442 gttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcact 26294534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 26307699 - 26307791
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||||    
T  26307699 gttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcact 26307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 35979329 - 35979404
Alignment:
Q  182 aataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcac 256  Q
    |||||||| |||||| |||||| ||||||||||| ||||||  |||||||||||||||||  || |||||||||||    
T  35979329 aataatactaaaattattcttttatataaatttttttaaaaccttgatttcattcattgttgctctaaaatttcac 35979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 17602438 - 17602348
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| ||||||| |||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  17602438 gttacacccaaattttcttaaaagttttttataatactaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 17602348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 28910779 - 28910677
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||||| | ||||| | | | | |||||||| |||||||| |||||  |||| |||||| ||||||||  | ||||||||||||||||||    
T  28910779 tgagtttttctattcacaccccatgtttttctggttacacctaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttctta 28910680  T
Q  219 aaa 221  Q
    |||    
T  28910679 aaa 28910677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 39366073 - 39365983
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| ||||||| |||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  39366073 gttacacccaaattttcttaaaatttttttataatactaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 39365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 1848320 - 1848385
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattca-ttgtcactataaaatttcactctctttca 265  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||| ||||| ||||| ||||||||    
T  1848320 tttatataaattttcttaaaactttaatttcattcatttatcactttaaaacttcaccctctttca 1848385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 28884678 - 28884779
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||||| | ||||| | | | | |||||||| |||||||| |||||  |||| |||||| ||||||||  | |||||||||||||||||||    
T  28884678 gagtttttctattcacaccccatgtttttctggttacacctaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaa 28884777  T
Q  220 aa 221  Q
    ||    
T  28884778 aa 28884779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 32911184 - 32911120
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca 265  Q
    ||||||||||||||||||||  |||||||| ||||||||| |   |||||||||| |||||||||    
T  32911184 tttatataaattttcttaaacatttgattttattcattgttatgctaaaatttcattctctttca 32911120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 5599184 - 5599266
Alignment:
Q  161 caaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||| |||||  |||| |||||||||||||| | |||| ||||||||||||||||||   | |||| |||||||||||    
T  5599184 caaattttcttaaaagttttttataataccaaaattatccttttatataaattttcttaaaaccctaattttattcattgtca 5599266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 5636091 - 5636009
Alignment:
Q  161 caaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||| |||||  |||| |||||||||||||| | |||| ||||||||||||||||||   | |||| |||||||||||    
T  5636091 caaattttcttaaaagttttttataataccaaaattatccttttatataaattttcttaaaaccctaattttattcattgtca 5636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 26290062 - 26290152
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  26290062 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 26290152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 26303319 - 26303409
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  26303319 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 26303409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 26315313 - 26315403
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  26315313 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 26315403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 16633828 - 16633889
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaatttt 214  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  |||||||||| ||||    
T  16633828 gttacacccaaattttcttaaattttttttataataccaaaattgccctttatataattttt 16633889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 23356610 - 23356675
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||| |||||||||||||||  |||| ||||||||||||||||||  || |||| |||||||||||    
T  23356610 tttttataataccaaaattgcccttttatataaattttcttaaaaccttaattttattcattgtca 23356675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 24821985 - 24822086
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | | | ||||||||||||||||| |||||    || |||||| ||||||||  | |||||||||||||||||||    
T  24821985 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaaaaaatttataatatcaaaattgcccttttatataaattttcttaa 24822084  T
Q  220 aa 221  Q
    ||    
T  24822085 aa 24822086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 42512944 - 42512884
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||||| ||||||||| |||| |||||||||||||||||| | | |||| |||||||||||    
T  42512944 ataatatcaaaattgtccttttatataaattttcttaaaactctaattttattcattgtca 42512884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 47541279 - 47541105
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| | || |||||| ||||||||||||||  ||||  ||||| |||||  |||||||||||||||| |||| |||||||||||||||    
T  47541279 gagtttttctattcacaccctatatattttttgttacacccagttttttctaaaaagtttttgataataccaaaattgtccttttatataaattttctta 47541180  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  47541179 aaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 47541105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 20493679 - 20493505
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| | || |||||| ||||||||||||||  ||||  ||||| |||||  |||||||||||||||| |||| |||||||||||||||    
T  20493679 gagtttttctattcacaccctatatattttttgttacacccagttttttttaaaaagtttttgataataccaaaattgtccttttatataaattttctta 20493580  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| || |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  20493579 aaatcttaatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 20493505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 118 - 292
Target Start/End: Original strand, 7883076 - 7883252
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||||| |||  |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| |||||||||||||    
T  7883076 tttgagtttttctattcacatcttatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttct 7883175  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  7883176 taagatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 7883252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 242489 - 242316
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    |||||||||||| || | || |||||| | | |||||||| |  |||| | ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  242489 gagtttttctatccacaccctatatatttatggttacacctagttttttaaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 242390  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  242389 aatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 242316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 47011299 - 47011126
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaa 219  Q
    ||||||| ||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| |||||||||||||||| | |||||||||||||||||||    
T  47011299 gagttttcctattcacaccctatatatttctggttacacccaatttttttaaaaagtttttgataataccaaaattgtctttttatataaattttcttaa 47011200  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  47011199 aatcttgatttcattcattgtcactctaaaatttcactctttttcacccaccaacgatcaaacaattctgatgt 47011126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 12846641 - 12846814
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| | | || |||||| | | ||||||||||| ||||   ||||  |||| |||||| ||||||||| |||| ||||||||||| ||||    
T  12846641 gagtttttctatttacaccctatatatttctggttacacccaatttttttaaaaagtttttgataatatcaaaattgtccttttatataaatttttttaa 12846740  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||    
T  12846741 aatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacattcctgatgt 12846814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 181 - 292
Target Start/End: Complemental strand, 40863302 - 40863189
Alignment:
Q  181 taataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatca 278  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||    
T  40863302 taatgataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcacactctttcacccaccaacgatca 40863203  T
Q  279 aacaatcctgatgt 292  Q
    ||||||||||||||    
T  40863202 aacaatcctgatgt 40863189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 42435615 - 42435786
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| |||| |||||| | | |||||| |||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||| ||||    
T  42435615 gagtttttctattcacatcctatatatttctggttacatccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaatttttttaa 42435714  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgat 290  Q
    ||| || |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||    
T  42435715 aatcttaatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcatgat 42435786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 39596931 - 39597105
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| | || |||||| | |  |||||||||| ||||  ||||  |||||  |||||||||||||||| |||| |||||||||||||||    
T  39596931 gagtttttctattcacaccctatatatttctgattacacccaattttttttaaatagtttttgataataccaaaattgtcctttcatataaattttctta 39597030  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  39597031 aaatcttgattttattcattatcactctaaaatttcactctctttcagccaccaacgatcaaacaatcttgatgt 39597105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 19475161 - 19474988
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttctt-tatataaattttcttaa 219  Q
    ||||||||||||||| | ||||||||| | | ||||||||||||||||| |||||  |||| |||||||||||||||  ||| ||||||  |||| ||||    
T  19475161 gagtttttctattcacaccccatatatttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttctatatatttttttttaa 19475062  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||||||||||||| ||||||| || ||||||||| ||||||||||| ||| |||| ||||||    
T  19475061 aatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgataaaagaatcttgatgt 19474988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 292
Target Start/End: Complemental strand, 29042874 - 29042698
Alignment:
Q  117 atttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttc 215  Q
    ||||||||||||||||||| |  | |||||| |||| ||||||| |  ||||  ||||   |||| |||||||||||||||| |||| ||||||||| ||    
T  29042874 atttgagtttttctattcacacactatatattttttattacacctagttttttttaaatt-ttttgataataccaaaattgtccttttatataaattatc 29042776  T
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  29042775 ttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacaatcaaacaatcctgatgt 29042698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 284
Target Start/End: Original strand, 40304802 - 40304944
Alignment:
Q  142 atatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgt 240  Q
    |||||| ||||||||||||||| ||||  | ||   |||| |||||||| ||||||| |||| ||||||||||||||||||| |||||||||||||| ||    
T  40304802 atatattttttgttacacccaattttt--ttaattttttttataataccgaaattgtccttttatataaattttcttaaaatcttgatttcattcatggt 40304899  T
Q  241 cactataaaatttcactctctttca-ccacaaacgatcaaacaat 284  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||    
T  40304900 cactctaaaatttcactctctttcacccaccaacgatcaaacaat 40304944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 30172814 - 30172991
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaat-tttcataaaacgttttaataat---accaaaattgttc-tttatataaatttt 214  Q
    |||||||||||||||| | || |||||| | | ||||||||||| | ||||| ||||  |||| |||||   ||||||||||| | ||||||||||||||    
T  30172814 tgagtttttctattcacaccctatatatttctggttacacccaattgtttca-aaaagtttttgataataccaccaaaattgtccttttatataaatttt 30172912  T
Q  215 cttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||| ||||||||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||| ||||||    
T  30172913 cttaaaatcttgatttcattcattgtcactctaaaattccactctcttgcacccaccaacgatcaaacaatcatgatgt 30172991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 46102673 - 46102507
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaat 222  Q
    |||||||||||| |||| |||||| ||| ||||||||||  ||||   ||||  |||| |||||||||||||||||| ||||||||||||||| ||||||    
T  46102673 tttttctattcacatcctatatatttttggttacacccagtttttttaaaaagttttttataataccaaaattgttcttttatataaattttcataaaat 46102574  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
         ||||||||||||||||| ||||||| |||||| ||||| |||| ||||||||||||||| ||||||    
T  46102573 ----ctttcattcattgtcactctaaaattccactctttttcacccaccaacgatcaaacaatcttgatgt 46102507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 48873693 - 48873809
Alignment:
Q  178 ttttaataataccaaaattgttcttta-tataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||| ||||||| || ||||||||| |||  |||||    
T  48873693 ttttgataataccaaaattgttctttaatataaatttttttaaaatgttgatttcattcgttgtcactttaaaattccattctctttcacccatcaacga 48873792  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  48873793 tcaaacaatcttgatgt 48873809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 36687916 - 36688090
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| ||||||||||| ||||  | ||   |||| |||||||||| ||||| ||||  | |||||||||||||    
T  36687916 gagtttttctattcacaccctatatatttttggttacacccaatttttttttaatttttttgataataccaatattgtccttttctgtaaattttcttaa 36688015  T
Q  220 aat-tttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||||| |||| |||||||||||||||| |||||    
T  36688016 aatctttgatttcattcattctcactctaaaattctactctctttcatccaccaacgatcaaacaatcccgatgt 36688090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 10594989 - 10594816
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| ||||||||||| |||| |||| |||||||     ||||    
T  10594989 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaagttgtccttttatataaaaaaaattaa 10594890  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  10594889 aatcttgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 10594816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 25226364 - 25226249
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| ||||| || ||||||| || ||||||||| |||| |||||    
T  25226364 ttttgataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattccttgtcgctctaaaattcca-tctctttcacccaccaacga 25226266  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  25226265 tcaaacaatcctgatgt 25226249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 25236196 - 25236081
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| ||||| || ||||||| || ||||||||| |||| |||||    
T  25236196 ttttgataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattccttgtcgctctaaaattcca-tctctttcacccaccaacga 25236098  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  25236097 tcaaacaatcctgatgt 25236081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 43777215 - 43777099
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttc-accacaaacga 275  Q
    |||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||| ||||| ||||||| |||||||||||  |||  |||||    
T  43777215 ttttgataatacaaaaattgtccttttatataaatttttttaaaatcttgatttcattcattttcactctaaaattccactctctttctcccatcaacga 43777116  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  43777115 tcaaacaatcctgatgt 43777099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 45869554 - 45869646
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||| ||||| |||| ||||||||||||||| ||||||    
T  45869554 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccattctttttcacccaccaacgatcaaacaatcgtgatgt 45869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 24981832 - 24981659
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| ||||  ||||| | |  |||||||||| ||||   ||||  |||| |||||| |||||||||||||| |||||||     ||||    
T  24981832 gagtttttctattcacatcctgtatatttctgattacacccaatttttttaaaaagtttttgataatatcaaaattgttcttttatataaaaaaatttaa 24981733  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||| |||| ||||||||||||||| ||||||    
T  24981732 aattttgatttcattcattgtcactctaaaattcccttctctttcacccaccaacgatcaaacaatcttgatgt 24981659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 292
Target Start/End: Complemental strand, 48613817 - 48613640
Alignment:
Q  117 atttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttc 215  Q
    ||||||||||||||||||| | || |||||| | | ||||||||||  ||||   ||    |||| |||||||||||||  | |||| ||||||||||||    
T  48613817 atttgagtttttctattcacaccctatatatttctggttacacccagtttttttaaattttttttgataataccaaaatcatccttttatataaattttc 48613718  T
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
     |||||| ||||||| ||||||||||||| |||||||||||||| ||||| |||| |||||| |||||||| ||||||    
T  48613717 ataaaatcttgatttgattcattgtcactctaaaatttcactctttttcacccaccaacgattaaacaatcatgatgt 48613640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 47778764 - 47778891
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||||| | | | ||||||||||||||||| |||||  |||| |||||||||||||||| | ||||||||||||||||    
T  47778764 tttgagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgtacttttatataaattttct 47778863  T
Q  217 taaaattttgatttcattcattgtcact 244  Q
    |||||   | |||| |||||||||||||    
T  47778864 taaaaccctaattttattcattgtcact 47778891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 43501497 - 43501574
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||  | |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  43501497 ttaaaatcttgatttcattcattgtcggtctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 43501574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 267
Target Start/End: Complemental strand, 37545070 - 37544927
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaat 222  Q
    |||||||||||| | || || ||| ||||||||||||||| ||| | |||||  |   ||||||| ||||||||| |||| |||||||||||||| |||     
T  37545070 tttttctattcacaccctatgtattttttgttacacccaattttacttaaaatttaacaataatatcaaaattgtccttttatataaattttcttcaaac 37544971  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
    || ||||||||||||||| ||| ||||||||||| ||||||||||    
T  37544970 tt-gatttcattcattgttactctaaaatttcaccctctttcacc 37544927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 41469463 - 41469547
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcac 266  Q
    |||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||| ||| |||||||| || |||||||||    
T  41469463 ataatatcaaaattgtccttttatataaattttcttaaaactttgatttcattcattgttactctaaaattttaccctctttcac 41469547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 19020477 - 19020580
Alignment:
Q  142 atatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc--tttatataaattttcttaaaattttgatttcattcattg 239  Q
    |||||| ||||||| || |||||||||| |||||  |||| |||||||||||||| |||  |||||||||||||||||||||  ||||||| ||||||||    
T  19020477 atatatattttgttgcatccaaattttcttaaaagtttttgataataccaaaatt-ttcgttttatataaattttcttaaaacattgattttattcattg 19020575  T
Q  240 tcact 244  Q
    |||||    
T  19020576 tcact 19020580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 25877595 - 25877503
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||   | |||| |||||||||||||    
T  25877595 gttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtcact 25877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 21873790 - 21873859
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||  | |||||||||||||||||||||    
T  21873790 gttacacccaaattttcttaaaacttttttataataccaaaattgcccttttatataaattttcttaaaa 21873859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 292
Target Start/End: Original strand, 44709175 - 44709352
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattt-tc 215  Q
    |||||||||||||||||| |||| |||||| |||||||||| |||  ||||   ||    |||| |||||| ||||||||| |||| |||||||    |     
T  44709175 tttgagtttttctattcacatcctatatattttttgttacatccagtttttttaaattttttttgataatatcaaaattgtccttttatataaaaaaatt 44709274  T
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| |||||| |||||||||||| | |||||||||| ||||||||| |||| |||||||||| |||| ||||||    
T  44709275 ttaaaatcttgattacattcattgtcattctaaaatttcaatctctttcatccaccaacgatcaaaaaatcttgatgt 44709352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 38282960 - 38283052
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||||    
T  38282960 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcact 38283052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 8214958 - 8215048
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||  || |||| || ||||||||    
T  8214958 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccttaattttatacattgtca 8215048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 292
Target Start/End: Complemental strand, 25765726 - 25765616
Alignment:
Q  183 ataataccaaaattgttctttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaac 281  Q
    |||||| ||||||||  |||| |||||  ||||||||||  |||||| ||||| |||||| | ||||||||||| |||||||| ||| ||||||| ||||    
T  25765726 ataatatcaaaattgccctttttataatatttcttaaaaggttgattccattcgttgtcattttaaaatttcacactctttcacccataaacgataaaac 25765627  T
Q  282 aatcctgatgt 292  Q
    |||||| ||||    
T  25765626 aatcctaatgt 25765616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 39073685 - 39073775
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  39073685 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 39073775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 21278297 - 21278389
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    |||||||| |||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||||    
T  21278297 gttacacctaaattttcttaaaatttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtcact 21278389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 7791669 - 7791579
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||| ||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  7791669 gttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 7791579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 42094796 - 42094885
Alignment:
Q  154 ttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||||||||||||||  |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  42094796 ttacacccaaatttttttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 42094885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 27325687 - 27325565
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | ||||||||||||||||| | ||   |||| |||||||||||||||| | ||||||||||||||||||    
T  27325687 tgagtttttctatttacaccccatgtttttctggttacacccaaattttc-ttaattttttttataataccaaaattgtccttttatataaattttctta 27325589  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  27325588 aaaccataattttattcattgtca 27325565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 35924920 - 35924830
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   |||| |||||| ||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  35924920 gttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 35924830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 40995977 - 40995888
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||    ||| ||||||||||||||| |||| ||||||||||||||||||   | |||| |||||||||||    
T  40995977 gttacacccaaattttcttaaaaaaaatta-taataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtca 40995888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 10533466 - 10533341
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||| | ||||||| | | | |  ||||| |||||||||| |||    |||| |||||||||||||||  |||| |||||||||||||    
T  10533466 tttgagtttttctatttacatcccatgtttttctgattacatccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttct 10533367  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  10533366 taaaaccctaattttattcattgtca 10533341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 32661614 - 32661683
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttctt-tatataaattttcttaaaa 221  Q
    ||||||||||||||||| |||||    || |||||||||||||||  ||| |||||||||||||||||||    
T  32661614 gttacacccaaattttcttaaaaaaaatttataataccaaaattgcccttctatataaattttcttaaaa 32661683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 48642688 - 48642587
Alignment:
Q  122 agtttttctattcatatcccatatatctttt-gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    |||||||||||||| | || |||| | |||| ||||||||||||||||| |||||  |||| |||||| ||||||||  | ||||||||| |||| ||||    
T  48642688 agtttttctattcacacccgatattttttttagttacacccaaattttcttaaaagtttttgataatatcaaaattgcccttttatataattttttttaa 48642589  T
Q  220 aa 221  Q
    ||    
T  48642588 aa 48642587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 24526913 - 24527088
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||  ||||||||||||||||||||  | |||||||||||||||||||    
T  24526913 gagtttttctattcacatcccatatatttttggttacatccaaattttcttaaaagtttttaataataccaaaattgcccttttatataaattttcttaa 24527012  T
Q  220 aattttgatttcattcattgtcactataaaatttcac--tctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||||||||||||| |||||||||||  | ||||||||| |||||| ||||||||||||||||||    
T  24527013 aatctttatttcattcattgtcactctaaaatttcactatatctttcaccaacaaacaatcaaacaatcctgatgt 24527088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 292
Target Start/End: Complemental strand, 32562344 - 32562172
Alignment:
Q  122 agtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaa 220  Q
    |||||||||||||| | || |||||| ||||||||||||||  ||||   ||||  |||||||||||| |||||||| |||| |||||||||||||||||    
T  32562344 agtttttctattcacaccctatatattttttgttacacccagtttttttaaaaagtttttaataatactaaaattgtccttttatataaattttcttaaa 32562245  T
Q  221 attttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    || ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  32562244 atcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 32562172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 7009882 - 7009709
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | ||||||||| | |  || ||||||||||||| |||||  |||| ||||||||||||||| ||||| ||||||||||||||||    
T  7009882 gagtttttctattcacaccccatatatttctgattgcacccaaattttcttaaaagttttttataataccaaaattgctcttttatataaattttcttaa 7009783  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||| ||||||    
T  7009782 aatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatcaaacaatcatgatgt 7009709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 51001186 - 51001359
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| ||||| ||||||||||||||| ||||||||||||||||    
T  51001186 gagtttttctattcacaccctatatatttctggttacacccaatttttttaaaaagtttttgataatcccaaaattgttcttttatataaattttcttaa 51001285  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  51001286 aatcttgatttcattcattgtcactctaaaatttcattctctttcatccaccaacgatcaaacaatcctgatgt 51001359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 8113027 - 8113200
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  8113027 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 8113126  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||||||||||||||  |||||| |||||||||||| |||| ||||||||||||||| ||||||    
T  8113127 aatcttgatttcattcattgtcactcaaaaattccactctctttcacccaccaacgatcaaacaatcttgatgt 8113200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 127 - 292
Target Start/End: Original strand, 24663499 - 24663665
Alignment:
Q  127 ttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaatttt 225  Q
    ||||||||| | ||||||| | | | ||||||||||||||||| | |||  ||||  |||||| |||||||  |||| ||||||||||||||||||| ||    
T  24663499 ttctattcacaccccatatgtttctcgttacacccaaattttctttaaaattttttgtaatactaaaattgcccttttatataaattttcttaaaatctt 24663598  T
Q  226 gatttcattcattgtcactataaaatttcactctctttcaccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||| ||||||| |||||| |||  ||||||| |||||||||||||||||||    
T  24663599 gatttcattcattgtcactttaaaattacactctttttgcccacaaatgatcaaacaatcctgatgt 24663665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 29921041 - 29921214
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | |||||||||   ||||   ||||  |||| |||||||||||||||| ||||| |||||||||||||||    
T  29921041 gagtttttctattcacaccctatatatttctggttacacccggtttttttaaaaagtttttgataataccaaaattgtcctttaatataaattttcttaa 29921140  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||  ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  29921141 aatcttaatttcatctattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 29921214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 13073975 - 13073859
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  13073975 tttttataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcatttattgtcactctaaaatttcactctctttcacccaccaacga 13073876  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||| ||||    
T  13073875 tcaaacaatcctcatgt 13073859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 17475248 - 17475132
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| |||  |||||    
T  17475248 ttttgataataccgaaattgttcttttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccattaacga 17475149  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  17475148 tcaaacaatcctgatgt 17475132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 32117308 - 32117400
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  ||||||||||||||||||||||    
T  32117308 tttatataaattttcttaaaattttgatttcattcattgtcactctaaaattccactctctttcacctatcaacgatcaaacaatcctgatgt 32117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 9639962 - 9640073
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaa 280  Q
    |||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  9639962 ataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaa 9640061  T
Q  281 caatcctgatgt 292  Q
    |||| |||||||    
T  9640062 caattctgatgt 9640073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 292
Target Start/End: Complemental strand, 26308434 - 26308323
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaa 280  Q
    |||| ||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||    
T  26308434 ataacaccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactttaaaattccactttctttcacccaccaacgatcaaa 26308335  T
Q  281 caatcctgatgt 292  Q
    ||||||||||||    
T  26308334 caatcctgatgt 26308323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 6015825 - 6015941
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| |||| |||||    
T  6015825 ttttgataataccaaaattgtccttttatataaattttcttaaaatcttgatttcattcattttcactctaaaattccactctctttcacccaccaacga 6015924  T
Q  276 tcaaacaatcctgatgt 292  Q
    | |||||||| ||||||    
T  6015925 ttaaacaatcatgatgt 6015941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 46290899 - 46291049
Alignment:
Q  142 atatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgt 240  Q
    |||||| ||| ||||||||||| ||||  |||||  |||| |||||| ||||||||| |||| ||||||||||| ||||||||||||||||||| |||||    
T  46290899 atatatttttggttacacccaatttttt-taaaagtttttgataatatcaaaattgtccttttatataaatttt-ttaaaattttgatttcatttattgt 46290996  T
Q  241 cactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  46290997 cactctaaaattacaatctctttcacccaccaacgatcaaacaatcctgatgt 46291049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 48934127 - 48934035
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  48934127 tttatataaatttacttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 48934035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 45942359 - 45942185
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| | | |||||| |||  ||||   ||||  |||| |||||| ||||||||| |||| |||| ||||||||||    
T  45942359 tgagtttttctattcacaccctatatatttctagttacatccagtttttttaaaaagtttttgataatagcaaaattgtccttttatattaattttctta 45942260  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| ||||||| |||| ||||||| |||  ||||||||||||||||||||||    
T  45942259 aaatcttgatttcattcattgtcactctaaaattccactatctttcacccatcaacgatcaaacaatcctgatgt 45942185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 3486605 - 3486432
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | ||||||||| ||| |||| |||||||||||| || ||  |||| | |||| ||||||||  |||| ||||||||| ||||||    
T  3486605 gagtttttctattcacaccccatatatttttggttatacccaaattttcttataagttttttaaaatatcaaaattgcccttttatataaattatcttaa 3486506  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
     || ||||||||||||||||||||| ||||||| ||| |||||||| ||| ||| |||||||||| | ||||||    
T  3486505 tatcttgatttcattcattgtcactctaaaattccacactctttcacccagaaatgatcaaacaaacttgatgt 3486432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 17702918 - 17702746
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||   ||| | ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  17702918 gagtttttctattcacaccctatatatttctggttacacccagtatttta-aaaagtttttgataataccaaaattgtccttttatataaattttcttaa 17702820  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||| ||||||||| ||||||| |||||||||||| |||| |||||| ||||||| |||||||    
T  17702819 aatcttaatttcattaattgtcactctaaaattccactctctttcacccaccaacgattaaacaattctgatgt 17702746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 19513428 - 19513544
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| ||||||||| |||||| |||| ||||||||||| | ||||| |||||||||| |||||||||| ||||||| |||||||||||| |||| |||||    
T  19513428 ttttgataataccagaattgtccttttatataaattttatgaaaatcttgatttcatgcattgtcactttaaaattccactctctttcacccaccaacga 19513527  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  19513528 tcaaacaatcctgatgt 19513544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 23443508 - 23443624
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttc-accacaaacga 275  Q
    |||| ||||||||||||||||  ||| ||||||||||||||||||| || |||||||||||| ||||| ||||||| || |||||||| ||||| |||||    
T  23443508 ttttgataataccaaaattgtcattttatataaattttcttaaaatcttaatttcattcattatcactctaaaattacaatctctttcaaccaccaacga 23443607  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  23443608 tcaaacaatcctgatgt 23443624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 40499397 - 40499289
Alignment:
Q  186 ataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaa 283  Q
    ||||||||||||| |||| |||||||||||||| |||| ||| |||||||||| |||||| ||||||| |||||||||||| |||| |||||||||||||    
T  40499397 ataccaaaattgtccttttatataaattttctttaaatcttgctttcattcatcgtcactctaaaattccactctctttcacccactaacgatcaaacaa 40499298  T
Q  284 tcctgatgt 292  Q
    |||||||||    
T  40499297 tcctgatgt 40499289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 12602772 - 12602657
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||| | |||| ||||||||||| | ||||||||||||||||| |||||||||||||||||||||| | | ||| |||| |||||    
T  12602772 tttttataataccaaaattatccttttatataaattttttgaaaattttgatttcatttattgtcactataaaatttcact-tttctcacccaccaacga 12602674  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  12602673 tcaaacaatcctgatgt 12602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 32087310 - 32087233
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  32087310 ttaaaatattgatttcattcattgtcacactaaaatttcactctctttcatccaccaacgatcaaacaatcctgatgt 32087233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 41713664 - 41713587
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  41713664 ttaaaatattgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 41713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 5673710 - 5673618
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| |||| |||||||||||| ||||||| ||||||||||||  |||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  5673710 tttacataatttttcttaaaatcttgattttattcattgtcacactaaaatttcactctctttcacccaccaacaatcaaacaatcctgatgt 5673618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 1701325 - 1701467
Alignment:
Q  140 ccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcatt 238  Q
    |||||||| | | |||||||| |||||||| ||| |  |||||||||||||||||||||  ||| ||||||||||||||||||  ||||||| |||||||    
T  1701325 ccatatatttctagttacacctaaattttcttaatagtttttaataataccaaaattgtcatttaatataaattttcttaaaaccttgattttattcatt 1701424  T
Q  239 gtcactataaaatttcactctctttca-ccacaaacgatcaaacaa 283  Q
     |||||   || |||||| |||||||| ||||||||||||||||||    
T  1701425 atcact---aagtttcaccctctttcacccacaaacgatcaaacaa 1701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 35274757 - 35274583
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttc-tta 218  Q
    ||||||||||||||| |  | |||||| ||| ||||||| ||| ||||   ||||  |||| |||||||||||||||| |||| |||||||      |||    
T  35274757 gagtttttctattcacactctatatatttttagttacactcaatttttttaaaaagtttttgataataccaaaattgtccttttatataaaaaaaaatta 35274658  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  35274657 aaattttgattttattcattgtcacgctaaaatttcactcactttcacccaccaacgatcaaacaatcctgatgt 35274583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 1702632 - 1702555
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||| ||||||||||| ||||||    
T  1702632 ttaaaattttgatttcatttattgtcactctaaaatttcactctctttcacccaccaacaatcaaacaatcttgatgt 1702555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 19247111 - 19247227
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||  |||| |||||||   | ||||||| |||||||||||| |||||||| ||||||| |||||||||||| |||| |||||    
T  19247111 ttttgataataccaaaattgcccttttatataaaaaattttaaaatcttgatttcattcgttgtcactctaaaattccactctctttcacccaccaacga 19247210  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  19247211 tcaaacaatcatgatgt 19247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 40400847 - 40400723
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||    
T  40400847 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 40400748  T
Q  220 aattttgatttcattcattgtcact 244  Q
    ||   | |||| |||||||||||||    
T  40400747 aaccctaattttattcattgtcact 40400723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 18909996 - 18909874
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    |||||||| |||| | | ||||||| | ||| |||||||| |||||||  |||||  |||| ||||||| |||||||| |||| ||||||||||||||||    
T  18909996 gagtttttttatttacaccccatatttttttggttacacctaaatttttttaaaatttttttataatactaaaattgtccttttatataaattttcttaa 18909897  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||| || |||| |||||||||||    
T  18909896 aatcttaattttattcattgtca 18909874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 15941668 - 15941543
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||    
T  15941668 tttgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaatttttttataataccaaaattgcccttttatataaattttct 15941569  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  15941568 taaaaccctaattttattcattgtca 15941543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 11172648 - 11172738
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  11172648 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 11172738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 13234624 - 13234714
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  13234624 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 13234714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 40535951 - 40536041
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  40535951 gttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 40536041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 14289553 - 14289602
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca 265  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  14289553 ttaaaattttgatttcatttattgtcactctaaaattccactctctttca 14289602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 2481955 - 2482045
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  2481955 gttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 2482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 9263616 - 9263562
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttca 255  Q
    ||||||||||||||||||||| |||||||||| || ||| |||| ||||||||||    
T  9263616 tttatataaattttcttaaaactttgatttcactccttgccactctaaaatttca 9263562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 39983191 - 39983070
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | | | ||||||||||||||||  |||||  ||||| ||||||||||||||  |||| ||||||||||||||||    
T  39983191 gagtttttctatttacaccccatatttttctggttacacccaaatttttttaaaaattttta-taataccaaaattgcccttttatataaattttcttaa 39983093  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  39983092 aaccctaattttattcattgtca 39983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 42949012 - 42948890
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| |||    |||| |||||||||||||||  |||| |||||||||||||| |    
T  42949012 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttta 42948913  T
Q  220 aattttgatttcattcattgtca 242  Q
    |||  | |||| |||||||||||    
T  42948912 aatcctaattttattcattgtca 42948890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 20582385 - 20582324
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattt 213  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| | |||||||||||||    
T  20582385 gttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattt 20582324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 44722730 - 44722605
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | ||||||| | | | | ||||||||||||||||| ||||   |||| |||||| ||||||||  | |||||||||||||| |    
T  44722730 tttgagtttttctatttacatcccatgtttttctggttacacccaaattttcttaaattttttttataatatcaaaattgcccttttatataaatttttt 44722631  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  44722630 taaaaccctaattttattcattgtca 44722605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 49824021 - 49823920
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | | | |||| |||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||    
T  49824021 gagtttttctatttacaccccatatttttctggttatacccaaattttcttaaattttttttataataccaaaattgcctttttatataaattttcttaa 49823922  T
Q  220 aa 221  Q
    ||    
T  49823921 aa 49823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 52043664 - 52043764
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||||| | | | ||||||||||||||||| | |||  |||| |||||||||||||||  | ||||||||||||||||    
T  52043664 tttgagtttttctatttacaccccatatttttctggttacacccaaattttc-ttaaatttttttataataccaaaattgcccttttatataaattttct 52043762  T
Q  217 ta 218  Q
    ||    
T  52043763 ta 52043764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 34270033 - 34270156
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | |||||| |||||||||| ||||   |||| |||||||||||||||  |||| |||||||||||||||    
T  34270033 tgagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttctta 34270132  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  34270133 aaaccctaattttattcattgtca 34270156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 34276268 - 34276391
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | |||||| |||||||||| ||||   |||| |||||||||||||||  |||| |||||||||||||||    
T  34276268 tgagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttctta 34276367  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  34276368 aaaccctaattttattcattgtca 34276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 2137664 - 2137754
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||     | |||||||||||||||| |||| ||||||||||||||||||   | |||| |||||||||||    
T  2137664 gttacacccaaattttcttaaaaaaaaattataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtca 2137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 33010011 - 33010101
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  | |||| ||||||||||||||||   | |||| |||||||||||    
T  33010011 gttacacccaaattttcttaaattttttttataataccaaaattgcccttttacataaattttcttaaaaccctaattttattcattgtca 33010101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 14246544 - 14246613
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    |||||| |||||||||  |||||  |||| |||||||||||||||  | |||||||||||||||||||||    
T  14246544 gttacatccaaatttttttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaa 14246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 11691817 - 11691643
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttctta 218  Q
    |||||||||||||||| |||| |||||| | | ||||||||||| ||||  |||||  |||| |||||||||||||||| | ||||||||||||||||||    
T  11691817 tgagtttttctattcacatcctatatatttctggttacacccaattttttttaaaattttttgataataccaaaattgtctttttatataaattttctta 11691718  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||| |||  ||||||||||||||||||||||    
T  11691717 aaattttgatttcattcattttcactctaaaattccactctctttcacccatcaacgatcaaacaatcctgatgt 11691643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 32136340 - 32136165
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||||| | ||||||||| | | |||||| | |||||||| |||||  |||| |||||||||||||||  |||| ||||||||||||||    
T  32136340 ttgagtttttctattcacaccccatatatttctagttacatctaaattttcttaaaagtttttgataataccaaaattgcccttttatataaattttctt 32136241  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||| || |||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||||    
T  32136240 aaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgt 32136165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 121 - 290
Target Start/End: Complemental strand, 8714082 - 8713911
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | ||||||||| | | ||||||||||||||| | |||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  8714082 gagtttttctattcacaccccatatatttctggttacacccaaatttccttaaaagttttttataataccaaaattgtccttttatataaattttcttaa 8713983  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgat 290  Q
    ||| || |||||||||||||||||| ||||||| || | ||||||| |||||||||||||||||||| ||||    
T  8713982 aatctttatttcattcattgtcactctaaaattccattatctttcacccacaaacgatcaaacaatcatgat 8713911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 24035457 - 24035279
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaatttt 214  Q
    |||||||||||||||||||| | || |||||| ||| |||| |||||| |||| | ||||  |||| |||||||||||||||| |||| |||||||||||    
T  24035457 aatttgagtttttctattcacaccctatatatttttggttatacccaattttttaaaaaagtttttgataataccaaaattgtccttttatataaatttt 24035358  T
Q  215 cttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||| |||||||||||||| ||| || ||||||| |||||||||||| |||| |||||||||||||| |||||||    
T  24035357 cttaaaatcttgatttcattcatcgtcgctctaaaattccactctctttcacccaccaacgatcaaacaattctgatgt 24035279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 3025480 - 3025653
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| |||| |||||| | | |||| |||||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  3025480 gagtttttctattcagatcctatatatttctggttatacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 3025579  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  3025580 aatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctaatgt 3025653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 124 - 292
Target Start/End: Complemental strand, 3027431 - 3027261
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaat 222  Q
    |||||||||||| | || |||||| | | ||||||||||  ||||  |||||  |||| |||||||||||||||| | |||||||||||||| |||||||    
T  3027431 tttttctattcacaccctatatatttctagttacacccagttttttttaaaagtttttgataataccaaaattgtctttttatataaatttttttaaaat 3027332  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
     ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  3027331 cttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 3027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 13961549 - 13961721
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || | |||| | | ||||||||||| ||||  ||||| ||||| |||||||||||||||| |||| |||||||||||||||     
T  13961549 gagtttttctattcacaccctaaatatttctggttacacccaatttttt-taaaaagttttgataataccaaaattgtccttttatataaattttcttac 13961647  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||| ||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  13961648 aatcttgatttcatttattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 13961721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 32933612 - 32933439
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||  | || |||||| ||| ||||||||||| ||||   ||||  |||| ||||||| |||||||| |||| ||||||||||||||||    
T  32933612 gagtttttctattcgcaccctatatatttttggttacacccaatttttttaaaaagtttttgataatacaaaaattgtccttttatataaattttcttaa 32933513  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||| ||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  32933512 aatcttgatttcattcattgtaactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 32933439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 10480489 - 10480664
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||||| | || |||||| | | ||||||||||| |||| | ||||  |||| ||||||| |||||||| |||| ||||||||||||||    
T  10480489 ttgagtttttctattcacaccctatatatttctggttacacccaattttttaaaaaagtttttgataatactaaaattgtccttttatataaattttctt 10480588  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||| |||||||||||| |||||||| ||||||| ||||||||| || |||| |||||||||| |||||||||||    
T  10480589 aaaatcttgatttcattccttgtcactctaaaattccactctcttgcacccaccaacgatcaaaaaatcctgatgt 10480664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 24897776 - 24897602
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| ||| ||||||||| | | ||||||||||||||||| |||||  |||| | |||||||||||||  |||| ||||||||| |||||    
T  24897776 tgagtttttctatttataccccatatatttctggttacacccaaattttcttaaaagttttttaaaataccaaaattgcccttttatataaattatctta 24897677  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    | || ||||||||||||||||||||||||||||| |||| ||||||| ||  |||||||||| ||| ||||||||    
T  24897676 atatcttgatttcattcattgtcactataaaattccactatctttcaccctaaaacgatcaatcaaacctgatgt 24897602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 34160317 - 34160144
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| ||||| |||||||||||||||    
T  34160317 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtcctttaatataaattttcttaa 34160218  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| |||  ||||||||||||||| ||||||    
T  34160217 aatgttgatttcattcattgtcactctaaaattccactctctttcacccatcaacgatcaaacaatcttgatgt 34160144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 43457469 - 43457642
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  43457469 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 43457568  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||  ||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  43457569 aatcttattttcattcattgtcactctaaaatttcactctctttcacccatcaacgatcaaacaatcctgatgt 43457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 1523728 - 1523612
Alignment:
Q  178 ttttaataataccaaaattgttct-ttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  1523728 tttttataataccaaaattatcctcttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacga 1523629  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  1523628 tcaaacaatcatgatgt 1523612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 30214974 - 30215144
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaat 222  Q
    |||||||||||||| |  |||||| | | |||| |||||  ||||  |||||  |||| |||||| ||||||| | |||| |||||||||||||||||||    
T  30214974 tttttctattcataccttatatatttctagttatacccagttttttttaaaagtttttgataatatcaaaattatccttttatataaattttcttaaaat 30215073  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
     ||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  30215074 cttgatttcattcattgtcactttaaaatttcactatctttcacccaccaacgatcaaacaatcctgatgt 30215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 284
Target Start/End: Complemental strand, 37829857 - 37829692
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| | | ||||||| ||  ||||  |||||  |||| |||||||||||||||| |||| |||||||||||||||    
T  37829857 tgagtttttctattcacaccctatatatttctggttacactcagtttttt-taaaagtttttgataataccaaaattgtccttttatataaattttctta 37829759  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaat 284  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||| ||||||||||    
T  37829758 aaattttgatttcattcattatcactctaaaatttcactctctttcacccaccaacaatcaaacaat 37829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 37682501 - 37682645
Alignment:
Q  151 ttgttacacccaaattttcataaa-acgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcactataa 248  Q
    ||||||||||||||||||| ||||    |||| |||||| ||||||||| | ||||||||||||||||||||||||| |||||||| ||||| ||| |||    
T  37682501 ttgttacacccaaattttcttaaattttttttgataatatcaaaattgtccttttatataaattttcttaaaatttttatttcatttattgttactctaa 37682600  T
Q  249 aatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  37682601 aatttcaatctctttcacccacaaacgatcaaacaattctgatgt 37682645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 43620877 - 43620993
Alignment:
Q  178 ttttaataataccaaaattgt-tctttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| |||| |||||    
T  43620877 ttttgataatatcaaaattgtctttttatataaattttcttaaaatcttgatttcattcattatcactctaaaattccactctctttcacccaccaacga 43620976  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  43620977 tcaaacaatcctgatgt 43620993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 50469986 - 50469814
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| ||| |||||||||||| |||| | ||||||||||||||    
T  50469986 gagtttttctattcacaccctatatatttatggttacacccaatttttttaaaaagtttttgatagtaccaaaattgtccttttacataaattttcttaa 50469887  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttcaccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||  |||||||| |||||||||||||   ||| ||||||||||||||||||    
T  50469886 aatcttgatttcattcattgtcacactaaaatttaactctctttcacccacaacaatcaaacaatcctgatgt 50469814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 292
Target Start/End: Original strand, 48515 - 48686
Alignment:
Q  123 gtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaa 221  Q
    ||||||||||||||| || |||||| | | |||| ||| |  |||| | ||||  |||| |||||| ||||||||| | |||||||||||||| ||||||    
T  48515 gtttttctattcataccctatatatttctggttataccaagtttttaaaaaaagtttttgataatatcaaaattgtctttttatataaatttttttaaaa 48614  T
Q  222 ttttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    | ||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||||||||||||||    
T  48615 tcttgatttcattcattgtcattataaaattttactctcttgcacccaccaacgatcaaacaatcctgatgt 48686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 35338867 - 35338978
Alignment:
Q  183 ataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaa 280  Q
    ||||||||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  35338867 ataataccaaatttgtccttttatataaattttcttaaaatcttaatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaa 35338966  T
Q  281 caatcctgatgt 292  Q
    ||||||||||||    
T  35338967 caatcctgatgt 35338978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 36852573 - 36852484
Alignment:
Q  204 atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  36852573 atataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 36852484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 51323396 - 51323304
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  51323396 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccattctctttcatccaccaacgatcaaacaatcctgatgt 51323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 47428960 - 47429071
Alignment:
Q  178 ttttaataataccaaaattgttctt-tatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| ||||||  |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  47428960 tttttataatataaaaattgtccttctatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacga 47429059  T
Q  276 tcaaacaatcct 287  Q
    | ||||||||||    
T  47429060 ttaaacaatcct 47429071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 290
Target Start/End: Original strand, 47466621 - 47466794
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataatacc-aaaattgttcttt-atataaattttctt 217  Q
    |||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| |||||| | |||||||| |||| ||||||||||||||    
T  47466621 tgagtttttctattcacaccctatatatttctggttacacccaatttttttaaaaagtttttgataatatcgaaaattgtccttttatataaattttctt 47466720  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgat 290  Q
    ||||| ||||||||||| ||||||||| |||||||  ||| ||||||| |||| ||||||||||||||||||||    
T  47466721 aaaatcttgatttcatttattgtcactctaaaattctactatctttcacccaccaacgatcaaacaatcctgat 47466794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 15506649 - 15506518
Alignment:
Q  137 atcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattc 235  Q
    ||||||||||| | | ||||||||||||||| | |||||  || ||||||||| |||||||  |||| ||||||||||||||||||  ||||||||||||    
T  15506649 atcccatatatttatggttacacccaaatttacttaaaattttataataatacaaaaattgcccttttatataaattttcttaaaacattgatttcattc 15506550  T
Q  236 attgtcactataaaatttcactctctttcacc 267  Q
    ||||||||| |||||||||||||  |||||||    
T  15506549 attgtcactctaaaatttcactccttttcacc 15506518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 20292489 - 20292660
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | |||||| || | ||||   ||||  |||| |||||||||||||| | |||| ||||||||||||||||    
T  20292489 gagtttttctattcacaccctatatatttctggttacatccgatttttttaaaaagtttttgataataccaaaattatccttttatataaattttcttaa 20292588  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgat 290  Q
    ||| ||||||||||||||| ||||||||||||| ||  |||||||| |||| || |||||||||||||||||    
T  20292589 aatcttgatttcattcattatcactataaaattccatcctctttcacccaccaaggatcaaacaatcctgat 20292660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 7319024 - 7318947
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  7319024 ttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 7318947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 22847880 - 22847764
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacga 275  Q
    |||| |||||||||||||||| |||| |||||||     ||||||| ||||||||||||||||||||  |||||||||||||||||||||| || |||||    
T  22847880 tttttataataccaaaattgtccttttatataaaaaaaattaaaatattgatttcattcattgtcacactaaaatttcactctctttcaccaaccaacga 22847781  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  22847780 tcaaacaatcctgatgt 22847764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 40431231 - 40431058
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacg-ttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| | || |||||| | | |||||| |||| ||||  ||||| | |||| |||||||||||||||| |||| |||||||  || |||    
T  40431231 gagtttttctattcacaccctatatatttctggttacatccaatttttt-taaaatgcttttgataataccaaaattgtccttttatataaaaattttta 40431133  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctcttt-caccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||| ||||| ||||||| |||||||||| | |||  ||||||||||||||||||||||    
T  40431132 aaatcttgatttcattcattttcactctaaaattccactctctttcccccatcaacgatcaaacaatcctgatgt 40431058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 41201618 - 41201695
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||| |||||||    
T  41201618 ttaaaatattgatttcattcattgtcacactaaaatttcactctctttcacccaccaacgatcaaacaattctgatgt 41201695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 51320630 - 51320715
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctt 262  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| | ||||||||| ||||||| | ||||||| |||||||||    
T  51320630 ttttgataataccaaaattgtccttttatataaattttcttaaaatctagatttcattaattgtcattctaaaattccactctctt 51320715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 1356318 - 1356442
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||    
T  1356318 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaa 1356417  T
Q  220 aattttgatttcattcattgtcact 244  Q
    ||   | |||| |||||||||||||    
T  1356418 aaccctaattttattcattgtcact 1356442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 48991363 - 48991196
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||||| | || |||||| | | | ||||||||  ||||   ||||  |||| |||||| ||||||||| |||| ||||||||||||||    
T  48991363 ttgagtttttctattcacaccctatatatttctggatacacccagtttttttaaaaagtttttgataatatcaaaattgtccttttatataaattttctt 48991264  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
            ||||||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||| ||||||    
T  48991263 --------gatttcattcattgtcactctaaaattccactttctttcacccaccaacgatcaaacaatcttgatgt 48991196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 42349523 - 42349400
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||||| | | | ||||||||||||||||| |||||    || |||||||||||||||| | ||||||||||||||||||    
T  42349523 tgagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaaaaaatttataataccaaaattgtccttttatataaattttctta 42349424  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  42349423 aaaccctaattttattcattgtca 42349400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 10541412 - 10541505
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattg--ttctttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||   | |||||||||||||||||||||   | |||| |||||||||||||    
T  10541412 gttacacccaaattttcttaaaagttttttataataccaaaattgccctttttatataaattttcttaaaaccctaattttattcattgtcact 10541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 37233470 - 37233560
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||||||| |||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||   | |||| |||||||||||    
T  37233470 gttacacctaaattttcttaaaatttttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtca 37233560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 56363492 - 56363403
Alignment:
Q  154 ttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  56363492 ttacacccaaattttcttaaaaactttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 56363403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 56017713 - 56017833
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | |||||| |||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||||    
T  56017713 tgagtttttctatttacaccccatgtttttctggttacatccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 56017812  T
Q  219 aaattttgatttcattcattg 239  Q
    |||  || |||| ||||||||    
T  56017813 aaaccttaattttattcattg 56017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 1536967 - 1536901
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
    |||||||||||||||||||||  || ||||||||||||||| || ||||| ||||| || |||||||    
T  1536967 tttatataaattttcttaaaaccttaatttcattcattgtcgctctaaaacttcaccctatttcacc 1536901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 20738536 - 20738447
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||  ||||| ||||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  20738536 gttacacccaaatttttttaaaa-gtttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 20738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 23894493 - 23894583
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||| ||||||| |||||  |||| |||||| ||||||||| |||| ||||||||||| ||||||  || |||| |||||||||||    
T  23894493 gttacacccgaattttcttaaaatttttttataatatcaaaattgtccttttatataaattttattaaaaccttaattttattcattgtca 23894583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 242
Target Start/End: Original strand, 43829519 - 43829642
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||| | | ||||| | | | | ||||||||||||||||| ||||   ||||| ||||||||||||||  |||| ||||||||||||||    
T  43829519 ttgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttta-taataccaaaattgcccttttatataaattttctt 43829617  T
Q  218 aaaattttgatttcattcattgtca 242  Q
    ||||   | |||| |||||||||||    
T  43829618 aaaaccctaattttattcattgtca 43829642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 55182792 - 55182915
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| | | ||||| | | ||| |||||| |||||||||| ||||   |||| ||||||  |||||||  |||| |||||||||||||||    
T  55182792 tgagtttttctatttacaccccatgtttttttggttacatccaaattttcttaaattttttttataatattaaaattgcccttttatataaattttctta 55182891  T
Q  219 aaattttgatttcattcattgtca 242  Q
    ||||  | |||| |||||||||||    
T  55182892 aaatcctaattttattcattgtca 55182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 5098819 - 5098729
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||   ||| | |||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  5098819 gttacacccaaattttcttaaaaaaattttaaaataccaaaattgcacttttatataaattttcttaaaaccctaattttattcattgtca 5098729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 55214864 - 55214970
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaatttt 214  Q
    |||| ||||||||||||| | | ||||| | | | | ||||||||||||||||| |||    |||| |||||||||||||||  |||| |||||||||||    
T  55214864 aattagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaatttt 55214963  T
Q  215 cttaaaa 221  Q
    |||||||    
T  55214964 cttaaaa 55214970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 25858431 - 25858362
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaa 221  Q
    ||||||||||||||||| ||||   |||| ||||||| |||||||  |||| ||||||||||||||||||    
T  25858431 gttacacccaaattttcttaaattttttttataatactaaaattgcccttttatataaattttcttaaaa 25858362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 53874391 - 53874432
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||||||| ||| |||| |||||||||||    
T  53874391 tttatataaattttcttaaaactttaattttattcattgtca 53874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 55220657 - 55220588
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaa 221  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||    
T  55220657 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaa 55220588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 48585612 - 48585439
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  48585612 gagtttttctattcacaccctatatatttttggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 48585513  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  48585512 aattttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 48585439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 118 - 292
Target Start/End: Complemental strand, 41589670 - 41589494
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||||| ||||||||||| | | |||||| |||||||||| |||||  |||| |||||||||||||||  | |||||||||||||| |    
T  41589670 tttgagtttttctattcacatcccatatatttatggttacatccaaattttcttaaaagtttttgataataccaaaattgcccttttatataaatttttt 41589571  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    | |||| || |||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||||    
T  41589570 ttaaatctttatttcattcattgtcactctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgt 41589494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 122 - 292
Target Start/End: Complemental strand, 19942565 - 19942393
Alignment:
Q  122 agtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaa 220  Q
    |||||||||| ||| | || |||||| ||| ||||||||||| ||||  |||||  |||| ||||||| |||||||| |||| |||||||||||  ||||    
T  19942565 agtttttctagtcacaccctatatatttttggttacacccaattttttttaaaagtttttgataatactaaaattgtccttttatataaatttttgtaaa 19942466  T
Q  221 attttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    || ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  19942465 atcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 19942393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 38144399 - 38144515
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcac-cacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||| |||||    
T  38144399 ttttgataataccaaaattgtccttttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacacaccaacga 38144498  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  38144499 tcaaacaatcctgatgt 38144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 36231752 - 36231925
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| |||||||||   ||||   ||||  |||| |||||| ||||||||| ||||| |||||||||||||||    
T  36231752 gagtttttctattcacaccctatatatttttggttacacccggtttttttaaaaagtttttgataatatcaaaattgtcctttaatataaattttcttaa 36231851  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||| |||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||    
T  36231852 aatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcccgatgt 36231925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 52813916 - 52813743
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| ||| ||||||||||| ||||   ||||  |||| |||||||||||| ||| |||| |||||||||||||||    
T  52813916 tgagtttttctattcacaccctatatatttttggttacacccaatttttttaaaaagtttttgataataccaaaactgtccttttatataaattttctta 52813817  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttcaccacaaacgatcaaacaatcctgatgt 292  Q
    |||| |||||||||||||| |||||| ||||||| |||| | |||  |||| ||||||||||||||||||||||    
T  52813816 aaatcttgatttcattcatcgtcactctaaaattccactttttttacccaccaacgatcaaacaatcctgatgt 52813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 2612423 - 2612594
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| |||| |||||| | | ||||||||||| ||||   ||||  |||| |||||| ||||||||| |||| | ||||||||||||||    
T  2612423 gagtttttctattcacatcctatatatttctggttacacccaatttttttaaaaagtttttgataatatcaaaattgtccttttaaataaattttcttaa 2612522  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgat 290  Q
    ||| ||||||||||||||| ||||| ||||||| |||||||||||| |||| |||||||||||||| |||||    
T  2612523 aatcttgatttcattcattctcactctaaaattccactctctttcacccaccaacgatcaaacaattctgat 2612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 7680323 - 7680496
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| ||||||||||| |||| | ||||  |||| |||||||||||||||| | ||||||||||   | ||||    
T  7680323 gagtttttctattcacaccctatatatttttggttacacccaattttttaaaaaagtttttgataataccaaaattgtccttttatataaaaaattttaa 7680422  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||||||| ||| || ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  7680423 aatcttgatttcattcatcgtcgctctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 7680496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 28412234 - 28412061
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| |||||| |||||| ||    
T  28412234 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataacttttctgaa 28412135  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||| ||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  28412134 aatcttgatttaattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 28412061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 52343760 - 52343588
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | |||||||||||  ||| | ||||  |||| || ||||||||||||| |||| ||||||||||||||||    
T  52343760 gagtttttctattcacaccctatatatttctagttacacccaatatttta-aaaagtttttgattataccaaaattgtccttttatataaattttcttaa 52343662  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| || | ||||||||| ||||||||||||    
T  52343661 aatcttgatttcattcattgtcactctaaaattccactctctttcacccgccaacgatcaagcaatcctgatgt 52343588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 49779022 - 49779138
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||| | ||||||| ||||||| |||||||||||| |||| |||||    
T  49779022 tttttataataccaaaattgtccttttatataaattttcttaaaatcttgatttcatttaatgtcactctaaaattccactctctttcacccaccaacga 49779121  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  49779122 tcaaacaatcctgatgt 49779138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 24200379 - 24200263
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| || |||||||||||| ||||| ||||||| |||||||||||| |||| |||||    
T  24200379 tttttataataccaaaattgtccttttatataaattttcttaaaatcttaatttcattcattatcactttaaaattccactctctttcacccaccaacga 24200280  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  24200279 tcaaacaatcttgatgt 24200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 4595649 - 4595821
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||| |||||| | || |||||| ||| ||||||||||  ||||  ||||| |||||  |||||||||||||| | |||| |||||||||||||||    
T  4595649 gagtttttgtattcacaccctatatatttttggttacacccagtttttt-taaaaggtttttgataataccaaaattttccttttatataaattttctta 4595747  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||| |||| |||||| ||| |||||||||||    
T  4595748 aaatcttgatttcattcattgtcactctaaaatttcactc-ctttcatccaccaacgataaaaaaatcctgatgt 4595821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 30419669 - 30419496
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||||| || |||||| | | |||||| |||  |||| | ||||  |||| |||||||||||||||| |||| ||| |||     ||||    
T  30419669 gagtttttctattcataccctatatatttctggttacatccagttttttaaaaaagtttttgataataccaaaattgtccttttatacaaaaaaatttaa 30419570  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||  |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  30419569 aatcttgatttcattcattgtcacactaaaatttcactctctttcacccacctacgatcaaacaatcctgatgt 30419496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 35232916 - 35233008
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||||||| |||| ||| ||||||||||| ||||||    
T  35232916 tttatatcaattttcttaaaatcttgatttcattcattgtcgctctaaaatttcactctctttcacccaccaacaatcaaacaatcatgatgt 35233008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 44353487 - 44353662
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttc-tt 217  Q
    |||||||||||||||| | || |||||| ||| ||||||||||| ||||   ||||  |||| |||||| ||||||||| |||| |||||||      ||    
T  44353487 tgagtttttctattcacaccctatatatttttggttacacccaatttttttaaaaagttttttataatatcaaaattgtccttttatataaaaaaaaatt 44353586  T
Q  218 aaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  44353587 aaaatcttgatttcattcattgtcacactaaaatttcactctctttcacccacctacgatcaaacaatcctgatgt 44353662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 20049131 - 20049007
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | | | ||||||||||||||||| |||||  |||| |||||||||||||||||| |||||||||||||||||||    
T  20049131 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgttcttttatataaattttcttaa 20049032  T
Q  220 aattttgatttcattcattgtcact 244  Q
    ||   | |||| |||||||||||||    
T  20049031 aaccctaattttattcattgtcact 20049007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 36835394 - 36835565
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttt-aataataccaaaattgttcttt-atataaattttct 216  Q
    ||||||||||||||||| | || |||||| | | |||| |||||  ||||  ||||| ||||| |||||||  |||||||| |||| ||||| |||||||    
T  36835394 ttgagtttttctattcacaccctatatatttctggttatacccagttttttttaaaaagtttttaataataataaaattgtccttttatatacattttct 36835493  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||| |||||||     ||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  36835494 taaaatcttgattt-----attgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 36835565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 8947085 - 8947189
Alignment:
Q  141 catatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaaaattttgatttcattcattg 239  Q
    ||||||| ||| |||||| ||||||||||||||||  |||||||||||||| |||||  | |||||||||||||| ||||||  ||||||| ||||||||    
T  8947085 catatatttttggttacatccaaattttcataaaagtttttaataataccacaattgcctttttatataaatttttttaaaaccttgattttattcattg 8947184  T
Q  240 tcact 244  Q
    |||||    
T  8947185 tcact 8947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 14279781 - 14279665
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||| | ||||| |||||||| ||| |||||||| ||||||| |||| ||||||| |||| |||||    
T  14279781 ttttgataatatcaaaattgtccttttatataaattttttgaaaatcttgatttctttcgttgtcactctaaaattccactatctttcacccaccaacga 14279682  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  14279681 tcaaacaatcatgatgt 14279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 33393346 - 33393234
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaattttcttaaaattttgatttcattcattgtcactataaaatt 252  Q
    ||||||| ||||||||| |||||  |||||| ||||| |||||||   |||||||||||| | |||| || ||||||||||||||||||||| |||||||    
T  33393346 gttacactcaaattttcttaaaattttttaaaaatactaaaattggcatttatataaattattttaatatcttgatttcattcattgtcactctaaaatt 33393247  T
Q  253 tcactctctttca 265  Q
    ||||  |||||||    
T  33393246 tcaccatctttca 33393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 54557069 - 54556945
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| |||  ||||||| |||||||  |||||  |||| |||||| ||||||||| |||| ||||||||||||||||    
T  54557069 gagtttttctattcacaccctatatatttttgattacacctaaatttttttaaaagttttttataatatcaaaattgtccttttatataaattttcttaa 54556970  T
Q  220 aattttgatttcattcattgtcact 244  Q
    ||| ||||||| ||| |||||||||    
T  54556969 aatcttgattttatttattgtcact 54556945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 40585421 - 40585512
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttctttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| ||||||||||||||||  |||||||||||||||||||||   | |||| |||||||||||||    
T  40585421 gttacacccaaattttcttaaaagttttttataataccaaaattgtcttttatataaattttcttaaaaccctaattttattcattgtcact 40585512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 23483340 - 23483274
Alignment:
Q  191 aaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcac 256  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  23483340 aaaattgttcttttatataaattttcttaaaaccttgatttcattcattgtcactctaaaatttcac 23483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 35154943 - 35155051
Alignment:
Q  185 aataccaaaattgttcttta-tataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaaca 282  Q
    |||||||||||| | ||||| |||||||||| ||||| | |||||||||||||||||| || ||||||| |||||||||||| |||| |||||||||| |    
T  35154943 aataccaaaattatcctttaatataaatttttttaaa-tcttgatttcattcattgtcgctctaaaattccactctctttcacccaccaacgatcaaata 35155041  T
Q  283 atcctgatgt 292  Q
    ||| ||||||    
T  35155042 atcatgatgt 35155051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26091136 - 26091048
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgt 240  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||  || |||| |||||||||    
T  26091136 gttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaaaaccttaattttattcattgt 26091048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 7678652 - 7678754
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||||| | ||||| | | ||| ||||||||||||||||| |||||  |||| |||||| ||||||||  | ||||||||||||||||||    
T  7678652 tgagtttttctattcacaccccatgtttttttggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttctta 7678751  T
Q  219 aaa 221  Q
    |||    
T  7678752 aaa 7678754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 36431138 - 36431016
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| ||||   |||| |||||||||||||||| | |||||||||||||||||||    
T  36431138 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgtccttttatataaattttcttaa 36431039  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  36431038 aaccctaattttattcattgtca 36431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 20656515 - 20656620
Alignment:
Q  117 atttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttc 215  Q
    ||||||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||| ||||||||| | |||||||||||||||    
T  20656515 atttgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgtccttttatataaattttc 20656614  T
Q  216 ttaaaa 221  Q
    ||||||    
T  20656615 ttaaaa 20656620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 22781071 - 22781196
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| ||||   |||| ||||||||||||||| || ||||||||||||||||    
T  22781071 tttgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaattttttttataataccaaaattgctcttttatataaattttct 22781170  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  22781171 taaaaccctaattttattcattgtca 22781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 24395993 - 24395920
Alignment:
Q  149 ttttgttacacccaaattttcataaaacgttttaataataccaaaattgttctt-tatataaattttcttaaaa 221  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||  ||| |||||||||||||||||||    
T  24395993 ttttgttacacccaaattttcttaaaagttttttataataccaaaattgcccttatatataaattttcttaaaa 24395920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 221
Target Start/End: Complemental strand, 32237125 - 32237021
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||    
T  32237125 tttgagtttttctatttacaccccatgtttgtctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttct 32237026  T
Q  217 taaaa 221  Q
    |||||    
T  32237025 taaaa 32237021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 7149231 - 7149354
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||||    
T  7149231 tgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 7149330  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  7149331 aaaccctaattttattcattgtca 7149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 10840659 - 10840781
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||    
T  10840659 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 10840758  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  10840759 aaccctaattttattcattgtca 10840781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 38871947 - 38871825
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | ||| |||||| |||||||||| |||||  |||| |||||| ||||||||  | |||||||||||||||||||    
T  38871947 gagtttttctatttacaccccatatttttttggttacatccaaattttcttaaaaaatttttataatatcaaaattgcccttttatataaattttcttaa 38871848  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  38871847 aaccctaattttattcattgtca 38871825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 41070706 - 41070584
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||    
T  41070706 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaa 41070607  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  41070606 aaccctaattttattcattgtca 41070584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 85455 - 85354
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||||| | ||||| | | | | ||||||||||||||||| |||||  |||| |||||| ||||||||  | |||||||||||||||||||    
T  85455 gagtttttctattcacaccccatgtttttctggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaa 85356  T
Q  220 aa 221  Q
    ||    
T  85355 aa 85354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 39626094 - 39626217
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaatt--gttctttatataaattttctta 218  Q
    ||||||||||||||||| ||||||| | | | |||| ||| || ||||| |||||  |||||||||||||||||||   || |||||||||| ||| |||    
T  39626094 gagtttttctattcataccccatatttttctcgttatacctaatttttcttaaaagtttttaataataccaaaattaccttttttatataaaatttttta 39626193  T
Q  219 aaattttgatttcattcattgtca 242  Q
    ||| ||| || | |||||||||||    
T  39626194 aaactttaatcttattcattgtca 39626217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 25711718 - 25711628
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaatt-gttctttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||||  |||| ||||||||||||||   | |||||||||||||||||||||   | |||| |||||||||||    
T  25711718 gttacacccaaattttcttaaaatttttttataataccaaaattacctttttatataaattttcttaaaaccctaattttattcattgtca 25711628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 31608387 - 31608325
Alignment:
Q  205 tataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
    ||||||| |||||||||  ||||||||||||||| || || |||||||||||| |||||||||    
T  31608387 tataaatattcttaaaaccttgatttcattcattatcgctctaaaatttcactatctttcacc 31608325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 672854 - 672785
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    |||||||| |||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||    
T  672854 gttacacctaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaa 672785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 4515328 - 4515392
Alignment:
Q  178 ttttaataataccaaaattgttctttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||| |||||||||||||||  ||||||||||||||||||||||   | |||| |||||||||||    
T  4515328 tttttataataccaaaattgccctttatataaattttcttaaaaccctaattttattcattgtca 4515392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 11124608 - 11124513
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaatttt 214  Q
    |||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| |||||||||||||||| | ||||||||||||||    
T  11124608 tgagtttttctattcacaccctatatatttctggttacacccaattttttcaaaaagtttttgataataccaaaattgtccttttatataaatttt 11124513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 50507717 - 50507780
Alignment:
Q  204 atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
    |||||| |||| |||||| |||||||||||| ||| ||||| ||||||||||  ||||||||||    
T  50507717 atataattttttttaaaactttgatttcattaattatcactctaaaatttcatcctctttcacc 50507780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 37970970 - 37971060
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  37970970 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 37971060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 118 - 292
Target Start/End: Original strand, 31639702 - 31639879
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||| ||||||||| | ||||||||| | | |||||| |||||| ||| |||||  ||||||||||||||||||||  |||| |||||||||||||    
T  31639702 tttgagttcttctattcacaccccatatatttctggttacatccaaatgttcttaaaagtttttaataataccaaaattgcccttttatataaattttct 31639801  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccac-aaacgatcaaacaatcctgatgt 292  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  31639802 taaaatcttgatttcattcattgtcactctaaaatttcactctctttcatccacaaaatgatcaaacaatcctgatgt 31639879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 4072559 - 4072737
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaatttt 214  Q
    |||| ||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| |||||||||||||||| |||| |||||||||||    
T  4072559 aattagagtttttctattcacaccctatatatttctggttacacccaatttttttaaaaagtttttgataataccaaaattgtccttttatataaatttt 4072658  T
Q  215 cttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  4072659 cttaaaatcttgatttcactcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 4072737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 45442830 - 45443004
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| ||||||||||| | | ||||||||||| ||||| |||||  |||||| |||||||||||||  |||| ||||||||| |||||    
T  45442830 tgagtttttctattcacatcccatatatttctggttacacccaagttttcttaaaagtttttaaaaataccaaaattgcccttttatataaattatctta 45442929  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    | || ||||||||||||||||||||| ||||| | |||||||||||| ||| |||||||||||||| ||||||||    
T  45442930 atatcttgatttcattcattgtcactctaaaactccactctctttcacccagaaacgatcaaacaaacctgatgt 45443004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 121 - 267
Target Start/End: Complemental strand, 44799564 - 44799417
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| | | ||||||||| | | ||||||||||||||||| |||||  |||||| |||||||||||||  |||| ||||||||| ||||||    
T  44799564 gagtttttctatttacaccccatatatttctggttacacccaaattttcttaaaagtttttaaaaataccaaaattgcccttttatataaattatcttaa 44799465  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
     || ||||||||||||||||||||||||||||| ||||||||||||||    
T  44799464 tatcttgatttcattcattgtcactataaaattccactctctttcacc 44799417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 4330703 - 4330877
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || |||||| | | |||||||||   ||||   ||||  |||| |||||||||||||||| |||| |||||||||||||||    
T  4330703 tgagtttttctattcacaccctatatatttctggttacacccggtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttctta 4330802  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||    
T  4330803 aaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaatgatcaaacaatcctgatgt 4330877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 288
Target Start/End: Original strand, 16312795 - 16312964
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | |  |||||| |||||||| | |||  ||||   ||||  |||| ||||||| ||||||||||||| ||||||||||||||||    
T  16312795 gagtttttctattcacaccttatatattttttgttatatccagtttttttaaaaagtttttgataatactaaaattgttcttttatataaattttcttaa 16312894  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctg 288  Q
    ||| ||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||    
T  16312895 aatcttgatttcattcattgtcactctaaaatttcattctctttcacccaccaacgatcaaacaatcctg 16312964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 10554159 - 10554304
Alignment:
Q  140 ccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcatt 238  Q
    |||||||| | | ||||||||||||||||| |||||  |||||| |||||||||||||  |||| ||||||||| |||||| || |||||||||||||||    
T  10554159 ccatatatttctggttacacccaaattttcttaaaagtttttaaaaataccaaaattgcccttttatataaattatcttaatatcttgatttcattcatt 10554258  T
Q  239 gtcactataaaatttcactctctttcacc-acaaacgatcaaacaa 283  Q
    |||||| ||||||||||| |||||||||| | ||||||||||||||    
T  10554259 gtcactctaaaatttcaccctctttcacctagaaacgatcaaacaa 10554304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 44456016 - 44456189
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||  |  ||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  44456016 gagtttttctattcacaccctatatatttctggttacacccagttttttttttaagtttttgataataccaaaattgtccttttatataaattttcttaa 44456115  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||| |||||||| ||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  44456116 aatcttgattgcattcattatcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 44456189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 13479697 - 13479813
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcac-cacaaacga 275  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||    
T  13479697 tttttataataccaaaattatccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattccactctctttcactcaccaacga 13479796  T
Q  276 tcaaacaatcctgatgt 292  Q
    | |||||||||||||||    
T  13479797 ttaaacaatcctgatgt 13479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 8033935 - 8034108
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||| ||||| | || |||||| | | ||||||||||  |||| | ||||  |||| ||||||||||||||||  ||| ||| |||||||||||    
T  8033935 tgagtttttccattcacaccctatatatttatagttacacccagtttttta-aaaagttttttataataccaaaattgtcattttatagaaattttctta 8034033  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||| ||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  8034034 aaatcttgatttcattcactgtcactctaaaattccactctctttcatccaccaacgatcaaacaatcctgatgt 8034108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 178 - 290
Target Start/End: Original strand, 38628296 - 38628410
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||  || ||    
T  38628296 ttttgataataccaaaattgtccttttatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccatcaatga 38628395  T
Q  276 tcaaacaatcctgat 290  Q
    |||||||||||||||    
T  38628396 tcaaacaatcctgat 38628410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 10522533 - 10522360
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||||| | || ||| || | | |||||||| || ||||   ||||  |||| |||||||||||||| | |||| | |||||||||||||    
T  10522533 tgagtttttctattcacaccctatacatttctggttacacctaatttttttaaaaagtttttgataataccaaaattatccttttaaataaattttctta 10522434  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||| || | ||||||| ||||||||||||||    
T  10522433 aaatcttgatttcattcattgtcactctaaaattccactctctttcacccgccaacgatc-aacaatcctgatgt 10522360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 7721769 - 7721881
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| ||||||||||||||||  ||| ||||||||||||||||||| |||||    |||||||||||| ||||||| |||||||||||| |||| |||||    
T  7721769 ttttgataataccaaaattgtcattttatataaattttcttaaaatcttgat----ttcattgtcactctaaaattccactctctttcacccaccaacga 7721864  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  7721865 tcaaacaatcttgatgt 7721881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 32550875 - 32550997
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattg-ttctttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||    
T  32550875 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcctttttatataaattttcttaa 32550974  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  32550975 aaccctaattttattcattgtca 32550997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 35896582 - 35896455
Alignment:
Q  116 aatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaatttt 214  Q
    |||| ||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||    
T  35896582 aattagagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaatttt 35896483  T
Q  215 cttaaaattttgatttcattcattgtca 242  Q
    |||||||   | |||| |||||||||||    
T  35896482 cttaaaaccctaattttattcattgtca 35896455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 31568889 - 31568983
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaatttt 214  Q
    ||||||||||||||| |||| |||||| ||||||||||||||  |||||  ||||  |||| |||||||||||||| | | ||||||||||||||    
T  31568889 gagtttttctattcacatcctatatattttttgttacacccagtttttctaaaaagtttttgataataccaaaattatccttttatataaatttt 31568983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 37094885 - 37094763
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| ||| ||||| | | | | ||||||||||||||||| ||||    ||| |||||||||||||||  |||| ||||||||||||||||    
T  37094885 gagtttttctatttataccccatgtttttctggttacacccaaattttcttaaatttgttttataataccaaaattgcccttttatataaattttcttaa 37094786  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||  || |||| |||||||||||    
T  37094785 aaccttaattttattcattgtca 37094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 1521008 - 1520939
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||| | |||||||||||||||||||||    
T  1521008 gttacacccaaattttcttaaattttttttataataccaaaattgtccttttatataaattttcttaaaa 1520939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 10639526 - 10639434
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcact 244  Q
    |||||| | |||||||| |||||  |||| |||||||||||||||| |||| ||||||||||||||||||   | |||| |||||||||||||    
T  10639526 gttacatctaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtcact 10639434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 25852682 - 25852772
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  25852682 gttacacccaaattttcttaaattttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 25852772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 40658597 - 40658644
Alignment:
Q  246 taaaatttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||||    
T  40658597 taaaattccaatctctttcacccacaaacgatcaaacaatcctgatgt 40658644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 1482688 - 1482566
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||| | | ||||||| | ||| ||||||||||||||||| |||    |||| |||||| |||||||   | |||||||||||||||||||    
T  1482688 gagtttttctatttacaccccatatttttttagttacacccaaattttcttaatttttttttataatatcaaaattacccttttatataaattttcttaa 1482589  T
Q  220 aattttgatttcattcattgtca 242  Q
    ||   | |||| |||||||||||    
T  1482588 aaccctaattttattcattgtca 1482566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 26171904 - 26171850
Alignment:
Q  239 gtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||| |||||||||||||| ||||| |||| ||||||||||||||||| ||||    
T  26171904 gtcactctaaaatttcactctttttcacccaccaacgatcaaacaatcctaatgt 26171850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 43577757 - 43577632
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttg-ttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttc 215  Q
    |||||||||||||||| | | ||||||| | | ||| |||||||||||||||| | ||   |||| |||||||||||||||  | |||||||||||||||    
T  43577757 tttgagtttttctatttacaccccatatttttcttggttacacccaaattttc-ttaattttttttataataccaaaattgcccttttatataaattttc 43577659  T
Q  216 ttaaaattttgatttcattcattgtca 242  Q
    ||||||   | |||| |||||||||||    
T  43577658 ttaaaaccctaattttattcattgtca 43577632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 927822 - 927698
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| | ||   |||| |||||||||||||||  | ||||||||||||||||    
T  927822 tttgagtttttctatttacaccccatgtttttctggttacacccaaattttc-ttaattttttttataataccaaaattgcccttttatataaattttct 927724  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  927723 taaaaccctaattttattcattgtca 927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 39697108 - 39697177
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaa 221  Q
    |||||| |||||||||| ||||   |||| ||||||||||||||||   |||||||||||||||||||||    
T  39697108 gttacatccaaattttcttaaattttttttataataccaaaattgtcattttatataaattttcttaaaa 39697177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 932105 - 932177
Alignment:
Q  181 taataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatt 252  Q
    |||||||||||||||||| |||| ||||||||||| || |||  ||||||||| |||||  |||| |||||||    
T  932105 taataataccaaaattgtccttttatataaatttttttgaaaccttgatttcactcattcccactctaaaatt 932177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 15012619 - 15012492
Alignment:
Q  115 taatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattt 213  Q
    ||||||||||||||||||| | | ||||| | | | | ||||||||||||||||| | ||   |||| ||||||| |||||||  | |||||||||||||    
T  15012619 taatttgagtttttctatttacaccccatgtttttctggttacacccaaattttc-ttaattttttttataatacgaaaattgcccttttatataaattt 15012521  T
Q  214 tcttaaaattttgatttcattcattgtca 242  Q
    ||||||||   | |||| |||||||||||    
T  15012520 tcttaaaaccctaattttattcattgtca 15012492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 35006435 - 35006383
Alignment:
Q  227 atttcattcattgtcactataaaatttcactctctttca-ccacaaacgatca 278  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||||| ||||    
T  35006435 atttcattcattgtcactctaaaatttcaccatctttcatccacaaacaatca 35006383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 6246214 - 6246041
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | |  |||||| ||| ||||||||| | ||||   |||||  ||| ||||||||||||||||||||| ||||||||||||||||    
T  6246214 gagtttttctattcacaccttatatatttttggttacaccctatttttttaaaaacaatttgataataccaaaattgttcttttatataaattttcttaa 6246115  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||| |||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  6246114 aatcttgatttcatccattgtcactctaaaatttcattctctttcacccaccaacgatcaaacaatcctgatgt 6246041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 41881003 - 41881176
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  41881003 gagtttttctattcacaccctatatatttctggttacacccagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 41881102  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  41881103 aatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgt 41881176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 27309889 - 27309710
Alignment:
Q  115 taatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattt 213  Q
    ||||| ||||||||||||||||| ||||||||| | | |||||| | |||||||| |||||  |||||| |||||||||||||  |||| |||||||||     
T  27309889 taattagagtttttctattcataccccatatatttctggttacatctaaattttcttaaaagtttttaaaaataccaaaattgcccttttatataaatta 27309790  T
Q  214 tcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||| || ||||||||||||||||||||| ||||||| |||||||||||| ||| |||| ||||||||| ||||||||    
T  27309789 tcttaatatcttgatttcattcattgtcactctaaaattccactctctttcacccagaaacaatcaaacaaacctgatgt 27309710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 10553149 - 10552976
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    |||||||| |||||| |||| |||||| ||| |||||| |||| |||| | ||||  |||| |||||| ||||||||| |||| ||||||||||| ||||    
T  10553149 gagtttttttattcacatcctatatatttttggttacatccaattttttaaaaaagtttttgataatatcaaaattgtccttttatataaatttttttaa 10553050  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||| ||||||    
T  10553049 aatcttgatttcattcattgtcactctaaaatttcactctcattcacccaccaacgatcaaacaatcgtgatgt 10552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 118 - 292
Target Start/End: Complemental strand, 18865533 - 18865357
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttta-tataaattttct 216  Q
    |||||||||||||||||| | || |||||| ||| ||||||||    ||||   ||||  |||| |||||| ||||||||| ||||| ||||||||||||    
T  18865533 tttgagtttttctattcacaccctatatatttttggttacacctggtttttttaaaaagtttttgataatatcaaaattgtcctttaatataaattttct 18865434  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  18865433 taaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 18865357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 40740066 - 40739950
Alignment:
Q  178 ttttaataataccaaaattgttcttta-tataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||| |||||    
T  40740066 ttttgataataccaaaattgtcctttaatataaattttcttaaaatcttgatttcatccattgtcactctaaaatttcactctctttcacccaccaacga 40739967  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  40739966 tcaaacaatcctgatgt 40739950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 36294835 - 36294684
Alignment:
Q  115 taatttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattt 213  Q
    ||||| ||||||||||||||| | | ||||||| |   |||||| |||||||||| |||||  |||| |||||||||||||||| |||| ||||||||||    
T  36294835 taattagagtttttctattcacacctcatatatttcaggttacatccaaattttcttaaaagtttttgataataccaaaattgtccttttatataaattt 36294736  T
Q  214 tcttaaaattttgatttcattcattgtcactataaaatttcactctctttca 265  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  36294735 tcttaaaatcttgatttcattcattttcactctaaaatttcactctctttca 36294684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 4622146 - 4621974
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||  |||||  |||| |||||||||||||||| |||| ||||||||||| ||||    
T  4622146 gagtttttctattcacaccctatatatttctggttacacccagtttttt-taaaagtttttgataataccaaaattgtccttttatataaatttttttaa 4622048  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| |||||||||| |||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  4622047 aatcttgatttcatccattgtcactctaaaatttcattctctttcacccaccaacgatcaaacaatcctgatgt 4621974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 7339742 - 7339601
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaat 251  Q
    ||||||||||  |||| | ||||  |||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7339742 gttacacccagttttttaaaaaagtttttgataatacaaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaat 7339643  T
Q  252 ttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||| |||| ||||||||||||||| ||||||    
T  7339642 ttcactctctttcacccaccaacgatcaaacaatcatgatgt 7339601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 38769257 - 38769080
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||||| | || |||||| ||| ||||||||||| |||| | ||||  |||| |||||||||||||||| | ||||||||||||||||||    
T  38769257 tgagtttttctattcacaccctatatatttttggttacacccaattttttaaaaaagttttttataataccaaaattgtccttttatataaattttctta 38769158  T
Q  219 aaattttgatttcattcat----tgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| || |||||||||||    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||    
T  38769157 aaatctt-atttcattcattgtctgtcactttaaaatttcactctcttttacccaccaacgatcaaacaatcctgatgt 38769080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 284
Target Start/End: Original strand, 13210167 - 13210335
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||||| | || |||||| | | ||||||||||  |||| | ||||  |||| ||||||| ||||||||  ||| |||||||||||||    
T  13210167 tttgagtttttctattcacaccctatatatttctggttacacccagttttttaaaaaagtttttgataatactaaaattgtcattttatataaattttct 13210266  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaat 284  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  13210267 taaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacgatcaaacaat 13210335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 24478302 - 24478210
Alignment:
Q  201 tttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  24478302 tttatataaattttcttaaaatcttgatttcattcattgtcactctaaaatttcactctctttcaccaaccaacgatcaaacaatcctgatgt 24478210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 37106922 - 37106806
Alignment:
Q  178 ttttaataataccaaaattgt-tctttatataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  37106922 ttttgataataccaaaattgtctttttatataaattttcttaaaatcttgatttcatttattgtcactctaaaatttcactctctttcacccaccaacga 37106823  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||| ||||||    
T  37106822 tcaaacaatcttgatgt 37106806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 10665285 - 10665459
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacaccca-aattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    ||||||||||||||| | || |||||| | | ||||||||||   ||||  |||||  |||| |||||||||||||||||| ||||||||||||||||||    
T  10665285 gagtttttctattcacaccctatatatttctggttacacccagtttttttttaaaagtttttgataataccaaaattgttcttttatataaattttctta 10665384  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||  ||||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||    
T  10665385 aaatcttattttcattcattgtcactctaaaattttactctctttcacccatcaacgatcaaacaatcctgatgt 10665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 18522965 - 18522792
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgtttta-ataataccaaaattgttcttt-atataaattttctta 218  Q
    ||||||||||||||| || | |||||| | | ||||||||||  ||||  ||||| |||||  |||||||||||||||| |||| ||||| |||||||||    
T  18522965 gagtttttctattcacattctatatatttctggttacacccagtttttt-taaaatgtttttgataataccaaaattgtccttttatatatattttctta 18522867  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||||||||||    
T  18522866 aaatcttgatttcattcattgtcactctaaaattccactatctttcacccaccaacgatcaaacaatcctgatgt 18522792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 37273922 - 37274095
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||| ||||   ||||  |||| ||||||| ||||||||  ||| |||||||||||||||     
T  37273922 gagtttttctattcacaccctatatatttctggttacacccaatttttttaaaaagtttttgataatactaaaattgtcattttatataaattttcttat 37274021  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| |||||||||||| |||| || |||||||||||||||||||    
T  37274022 aatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaatgatcaaacaatcctgatgt 37274095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 15271885 - 15272001
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||||||||||||| |||| ||||||| ||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| |||||    
T  15271885 ttttgataataccaaaattgtccttttatataaaattttttaaaatcttgatttcattcattgtcactctaaaattccactctctttcacccaccaacga 15271984  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  15271985 tcaaacaatcctgatgt 15272001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 12188499 - 12188664
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaattttcttaaaat 222  Q
    |||||||||||| ||||||||||| |||| ||||| |||||||||| |||||  |||| |||||||||||||||| | ||||||||||     |||||||    
T  12188499 tttttctattcacatcccatatattttttattacatccaaattttcttaaaagttttttataataccaaaattgtctttttatataaaaaaaattaaaat 12188598  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcct 287  Q
     ||||||||||||||||||||| ||||||| |||| | ||||| ||||||| ||| ||||||||||    
T  12188599 attgatttcattcattgtcactctaaaattccactttatttcacccacaaatgattaaacaatcct 12188664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 37341700 - 37341623
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  37341700 ttaaaatcttgatttcattcattgtcacattaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgt 37341623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 284
Target Start/End: Complemental strand, 31485611 - 31485445
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgt-tctttatataaat-tttctta 218  Q
    ||||||||||||||| | || |||||| | | |||||| |||  ||||   ||||  |||| |||||||||||||||| | |||||||| || ||| |||    
T  31485611 gagtttttctattcacaccctatatatttctggttacatccagtttttttaaaaagtttttgataataccaaaattgtctttttatatatatatttttta 31485512  T
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttc-accacaaacgatcaaacaat 284  Q
    |||| ||||||||||||||||||||| ||||||| || |||||||| ||||| ||||||||||||||    
T  31485511 aaatcttgatttcattcattgtcactctaaaattccattctctttcaaccaccaacgatcaaacaat 31485445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 42436455 - 42436628
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||| ||| ||||   ||||  |||| |||||||||||||||| |||| |||||||     ||||    
T  42436455 gagtttttctattcacaccctatatatttctggttacacacaatttttttaaaaagttttttataataccaaaattgtacttttatataaaaaaaattaa 42436554  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| || |||||||||||||||||  |||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  42436555 aatcttaatttcattcattgtcacactaaaatttcactctctttcacccatcaacgatcaaacaatcatgatgt 42436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 43547814 - 43547888
Alignment:
Q  219 aaattttgatttcattcattgtcactataaaatttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||| ||||||    
T  43547814 aaatattgatttcattcattgtcacactaaaatttcactctctttcaccaaccaacgatcaaacaatcatgatgt 43547888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 8048053 - 8048130
Alignment:
Q  216 ttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||| ||||||||||||||||||||| ||||| | |||||||||||| |||| |||||||||||||| |||||||    
T  8048053 ttaaaatcttgatttcattcattgtcactctaaaaatccactctctttcatccaccaacgatcaaacaattctgatgt 8048130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 18979428 - 18979255
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | | ||||||||||  ||||   ||||  |||| |||||||||||||| | |||| |||||||     ||||    
T  18979428 gagtttttctattcacaccctatatatttctagttacacccagtttttttaaaaagtttttgataataccaaaattatccttttatataaaaaaaattaa 18979329  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||| ||||||||||||  ||||| |||||||||||||| |||| |||||||||||||| |||||||    
T  18979328 aatcttgattttattcattgtcacactaaaacttcactctctttcacccaccaacgatcaaacaattctgatgt 18979255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 8233436 - 8233360
Alignment:
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaatcctgatgt 292  Q
    ||||||||| |||||||||||||||||| |||||||||||||| || || |||| ||||||||||||||| ||||||    
T  8233436 taaaattttaatttcattcattgtcactctaaaatttcactcttttacacccaccaacgatcaaacaatcatgatgt 8233360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 43517587 - 43517679
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtcact 244  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||   | |||| |||||||||||||    
T  43517587 gttacacccaaattttcttaaaagttttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtcact 43517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 6468963 - 6469088
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    |||||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||    
T  6468963 tttgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttct 6469062  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  6469063 taaaaccctaattttattcattgtca 6469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 267
Target Start/End: Complemental strand, 3123651 - 3123507
Alignment:
Q  125 ttttctattcatatcccatatatcttttgttacacccaaa-ttttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaat 222  Q
    |||| |||||| | ||||||||| | |  ||||||||||| ||||| |||||  |||| |||||| |||| || | |||| |||||| || ||||||||     
T  3123651 ttttttattcacaccccatatatttctgattacacccaaaattttcttaaaagtttttgataatatcaaagttatccttttatataatttctcttaaaac 3123552  T
Q  223 tttgatttcattcattgtcactataaaatttcactctctttcacc 267  Q
     |||||||||||||| |||| | ||||||||||||||||||||||    
T  3123551 cttgatttcattcatcgtcattctaaaatttcactctctttcacc 3123507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 29385515 - 29385637
Alignment:
Q  124 tttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatat-aaattttcttaaaa 221  Q
    |||||||||||| | ||||||||| |||| |||||||||||||||| |||    |||| |||||| ||||||||| | ||||||| ||||||||||||||    
T  29385515 tttttctattcacaccccatatattttttattacacccaaattttcttaatttttttttataataacaaaattgtccttttatataaaattttcttaaaa 29385614  T
Q  222 ttttgatttcattcattgtcacta 245  Q
       |||||| ||||||||||||||    
T  29385615 -cctgattttattcattgtcacta 29385637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 15021319 - 15021205
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| | |  |||||||||| ||||   ||||  |||| |||||| ||||||||| |||| ||||||||||||||||    
T  15021319 gagtttttctattcacaccctatatatttctgattacacccaatttttttaaaaagtttttgataatatcaaaattgtccttttatataaattttcttaa 15021220  T
Q  220 aattttgatttcatt 234  Q
    ||| |||||||||||    
T  15021219 aatcttgatttcatt 15021205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 19616874 - 19616976
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||  |||| |||||||||||||||  | ||||||||||||||||||    
T  19616874 tgagtttttctatttacaccccatgtttttctggttacacccaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttctta 19616973  T
Q  219 aaa 221  Q
    |||    
T  19616974 aaa 19616976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 24559874 - 24559805
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttct-ttatataaattttcttaaaa 221  Q
    ||||||||||||||||| ||||   |||| |||||||||||||||| || ||||||||||||||||||||    
T  24559874 gttacacccaaattttcttaaattttttttataataccaaaattgtcctattatataaattttcttaaaa 24559805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 19033977 - 19034100
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttctta 218  Q
    |||||||||||||| | ||||||| | | ||| |||||||| |||||||  ||||   |||| ||||||||||||||| || |||||||||||||| |||    
T  19033977 tgagtttttctatttacatcccatgtttttttagttacacctaaatttttttaaattttttttataataccaaaattgctcttttatataaattttttta 19034076  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  19034077 aaaccctaattttattcattgtca 19034100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 31499718 - 31499651
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcact 244  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||  ||||||||||| ||| |||||    
T  31499718 ttttgataataccaaaattgtccttttatataaattttcttaaaaacttgatttcatttattttcact 31499651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 29921225 - 29921163
Alignment:
Q  160 ccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaa 221  Q
    |||||||||| |||||  |||| |||||||||||||||| | |||||||||||||||||||||    
T  29921225 ccaaattttcttaaaagtttttgataataccaaaattgtccttttatataaattttcttaaaa 29921163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 6733487 - 6733442
Alignment:
Q  211 ttttcttaaaattttgatttcattcattgtcactataaaatttcac 256  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||    
T  6733487 ttttcttaaaaccttgatttcattcattgtcactctaaaatttcac 6733442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 24600906 - 24600838
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttct-ttatataaattttcttaaaa 221  Q
    ||||||||||||||||| ||||   ||||| ||||||||||||||| || ||||||||||||||||||||    
T  24600906 gttacacccaaattttcttaaattttttta-taataccaaaattgtcctattatataaattttcttaaaa 24600838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 38759690 - 38759779
Alignment:
Q  154 ttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||| |||||||| |||||  |||| |||||||||||||||  | |||||||||||||||||||||   | |||| |||||||||||    
T  38759690 ttacacctaaattttcttaaaagttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 38759779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 31499657 - 31499615
Alignment:
Q  251 tttcactctctttcacc-acaaacgatcaaacaatcctgatgt 292  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  31499657 tttcactctctttcacccaccaacgatcaaacaatcctgatgt 31499615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 31510739 - 31510828
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| ||||   ||||| ||||| ||||||||  |||| |||||||||||||||||| | | |||| |||||||||||    
T  31510739 gttacacccaaattttcttaaattttttta-taatatcaaaattgcccttttatataaattttcttaaaactctaattttattcattgtca 31510828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 4155464 - 4155529
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||   | |||| |||||||||||    
T  4155464 tttttataataccaaaattgtccttttatataaattttcttaaaaccctaattttattcattgtca 4155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 43149271 - 43149347
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattg 197  Q
    ||||||||||||| | | ||||||| | | | ||||||||||||||||| ||||   |||| |||||||||||||||    
T  43149271 gagtttttctatttacaccccatatttttctggttacacccaaattttcttaaattttttttataataccaaaattg 43149347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 242
Target Start/End: Original strand, 43292944 - 43293068
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctt 217  Q
    ||||||||||||||| | | ||||| | | | | ||||||||||||||||| |||||    || |||||| ||||||||  |||| ||||||||||||||    
T  43292944 ttgagtttttctatttacaccccatgtttttctagttacacccaaattttcttaaaaaaaatttataatatcaaaattgcccttttatataaattttctt 43293043  T
Q  218 aaaattttgatttcattcattgtca 242  Q
    ||||   | |||| |||||||||||    
T  43293044 aaaaccctaattttattcattgtca 43293068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 280
Target Start/End: Complemental strand, 200813 - 200653
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| | || |||||| ||| ||||||||||| ||||  |||||  |||||||||||| ||||||||  ||| ||||||||||||||||    
T  200813 gagtttttctattcacaccctatatatttttggttacacccaatttttt-taaaagtttttaataatactaaaattgtcattttatataaattttcttaa 200715  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctctttcac-cacaaacgatcaaa 280  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  200714 aattttgattttattcattgtcactctaaaatttcactctctttcactcaccaacgatcaaa 200653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 6788 - 6961
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||||| |||| |||||| | | ||||||| ||  ||||   ||||  |||| |||||||||||||||| |||| ||||||||||||||||    
T  6788 gagtttttctattcacatcctatatatttctggttacacacagtttttttaaaaagtttttgataataccaaaattgtccttttatataaattttcttaa 6887  T
Q  220 aattttgatttcattcattgtcactataaaatttcactctcttt-caccacaaacgatcaaacaatcctgatgt 292  Q
    ||| ||||||||||||||||||||| ||||||| ||| ||||||  ||||| ||||||||||||||||||||||    
T  6888 aatcttgatttcattcattgtcactctaaaattacacactctttaaaccaccaacgatcaaacaatcctgatgt 6961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 169 - 53
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| |||||    
T  169 ttttgataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattacactctctttcacccaccaacga 70  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  69 tcaaacaatcctgatgt 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 334 - 218
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||| |||||    
T  334 ttttgataatatcaaaattgtccttttatataaattttcttaaaatcttgatttcattcattgtcactctaaaattacactctctttcacccaccaacga 235  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  234 tcaaacaatcctgatgt 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 284
Target Start/End: Original strand, 365053 - 365219
Alignment:
Q  118 tttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttct 216  Q
    |||||||||||||||||| |||  |||||| ||| ||||||||||| |||| | ||||  |||| |||||| ||||||| |||||| ||||||||||| |    
T  365053 tttgagtttttctattcacatcaaatatatttttggttacacccaattttttaaaaaagtttttgataatatcaaaattattcttttatataaatttttt 365152  T
Q  217 taaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacgatcaaacaat 284  Q
     |||||||||||||||||||| |||||| ||||||||||  |||||||| |||| ||||||||||||||    
T  365153 aaaaattttgatttcattcatcgtcactctaaaatttca--ctctttcacccaccaacgatcaaacaat 365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 9510 - 9394
Alignment:
Q  178 ttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca-ccacaaacga 275  Q
    |||| ||||||||| |||||| |||| ||||||||||| | ||||| |||||||||| |||||||||| ||||||| |||||||||||| |||| |||||    
T  9510 ttttgataataccagaattgtccttttatataaattttatgaaaatcttgatttcatgcattgtcactttaaaattccactctctttcacccaccaacga 9411  T
Q  276 tcaaacaatcctgatgt 292  Q
    |||||||||||||||||    
T  9410 tcaaacaatcctgatgt 9394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 37355 - 37456
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttc-tttatataaattttcttaa 219  Q
    ||||||||||||||| | ||||| | | ||| ||||||||||||||||| |||||  |||| |||||| ||||||||  | |||||||||||||||||||    
T  37355 gagtttttctattcacaccccatgtttttttggttacacccaaattttcttaaaagttttttataatatcaaaattgcccttttatataaattttcttaa 37454  T
Q  220 aa 221  Q
    ||    
T  37455 aa 37456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 3774 - 3849
Alignment:
Q  191 aaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtcactataaaatttcactctctttca 265  Q
    ||||||||||||| ||||||| ||| ||||||  ||||||||||||||||||||| ||||||||||| | ||||||    
T  3774 aaaattgttcttttatataaaattttttaaaaccttgatttcattcattgtcactctaaaatttcacccgctttca 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 14685 - 14563
Alignment:
Q  121 gagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaa 219  Q
    ||||||||||||| | | ||||| | | ||| ||||||||||||||||| |||    |||| |||||||||||||||  |||| |||||||||||||| |    
T  14685 gagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttta 14586  T
Q  220 aattttgatttcattcattgtca 242  Q
    |||  | |||| |||||||||||    
T  14585 aatcctaattttattcattgtca 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 242
Target Start/End: Complemental strand, 4837 - 4712
Alignment:
Q  119 ttgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaa-acgttttaataataccaaaattgttc-tttatataaattttct 216  Q
    ||||||||||||||| | | ||||||| | | | ||||||||||||||||| ||||    |||| |||||| ||||||||| | ||||||||||||||||    
T  4837 ttgagtttttctatttacaccccatatttttctggttacacccaaattttcttaaatttttttttataatatcaaaattgtccttttatataaattttct 4738  T
Q  217 taaaattttgatttcattcattgtca 242  Q
    |||||   | |||| |||||||||||    
T  4737 taaaaccctaattttattcattgtca 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 41350 - 41227
Alignment:
Q  120 tgagtttttctattcatatcccatatatcttttgttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttctta 218  Q
    |||||||||||||| | | ||||| | | ||| ||||||||||||||||| |||    |||| |||||| ||||||||  |||| |||||||||||||||    
T  41350 tgagtttttctatttacaccccatgtttttttggttacacccaaattttcttaatttttttttataatatcaaaattgcccttttatataaattttctta 41251  T
Q  219 aaattttgatttcattcattgtca 242  Q
    |||   | |||| |||||||||||    
T  41250 aaaccctaattttattcattgtca 41227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 1399 - 1489
Alignment:
Q  153 gttacacccaaattttcataaaacgttttaataataccaaaattgttcttt-atataaattttcttaaaattttgatttcattcattgtca 242  Q
    ||||||||||||||||| |||    |||| |||||||||||||||  |||| ||||||||||||||||||   | |||| |||||||||||    
T  1399 gttacacccaaattttcttaatttttttttataataccaaaattgcccttttatataaattttcttaaaaccctaattttattcattgtca 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University