View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850_low_60 (Length: 288)
Name: NF7850_low_60
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 46329121 - 46328855
Alignment:
| Q |
1 |
taacttacaagcattattaatacgctattttttccccgaccctgttcaattcaaaagaccatagttcataatacaacgacactgtgtatgttgtctatta |
100 |
Q |
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| T |
46329121 |
taacttataagcattattaatacactatttc--ccccgaccctgttcaattcaaaagaccatagttcataatacaacgacactgtgtatgttgtctatta |
46329024 |
T |
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| Q |
101 |
agtattattactttcttaaagctataatatcttttagtgaccatggcgagggctattttgaaccagaaatatagatgcagttggataggttacaagtgaa |
200 |
Q |
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| T |
46329023 |
a---ttagtactttcttaaagctacaatatcttttagtgaccatggcgagggctattttgaaccagaaatatagatccagttggatagattataagt--- |
46328930 |
T |
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| Q |
201 |
cgaacaattgttgtaaatatacaaattatgaaactactaagaatcaagaaatggatttagctacataactatttcat |
277 |
Q |
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| T |
46328929 |
-gaacaattgttgtaaat-tacaaattatgaaactactaagaatcaggaaatggatttagctgcataactatttcat |
46328855 |
T |
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