View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7851_low_32 (Length: 228)
Name: NF7851_low_32
Description: NF7851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7851_low_32 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 35205911 - 35206138
Alignment:
| Q |
1 |
tctaaactaaatccttttctgagaactgtaacaataggttttaaacctctactctccatgataacttcgcggccattagtatgcttcgaaagcttcaaaa |
100 |
Q |
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| T |
35205911 |
tctaaactaaatccttttctgagaactgtaacaataggttttaaacctctactctccatgataacttcgcggccattagtatgcttcgaaagcttcaaaa |
35206010 |
T |
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| Q |
101 |
gagcagcaattgcgttctcttgcgttgttgaagttagaacaagatcaatcaacggtggcacagttccaatttcaaccaaacatgccgtgttgaaaacatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35206011 |
gagcagcaattgcgttctcttgcgttgttgaagttagaacaagatcaatcaacggtggcacagttccaatttcaaccaaacatgccgtgttgaaaacatt |
35206110 |
T |
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| Q |
201 |
tgatttcgcgagtaaatgaatctcataa |
228 |
Q |
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|||||||||||||||| ||||||||||| |
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| T |
35206111 |
tgatttcgcgagtaaacgaatctcataa |
35206138 |
T |
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