View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7851_low_7 (Length: 527)
Name: NF7851_low_7
Description: NF7851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7851_low_7 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 504; Significance: 0; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 10375768 - 10376275
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375768 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
10375867 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375868 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
10375967 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375968 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10376067 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376068 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
10376167 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376168 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
10376267 |
T |
|
| Q |
501 |
aatcataa |
508 |
Q |
| |
|
|||||||| |
|
|
| T |
10376268 |
aatcataa |
10376275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 504
Target Start/End: Complemental strand, 9839007 - 9838504
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |
|
|
| T |
9839007 |
attattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcata |
9838908 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9838907 |
tcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgt |
9838808 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| | ||||||| | | |||||||||||||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
9838807 |
tatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaagg |
9838708 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| | | ||||| |||||||||||||| |||||| || ||| |
|
|
| T |
9838707 |
tgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaa |
9838608 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||| |||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838607 |
ttgatctctttgtaaaaactattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
9838508 |
T |
|
| Q |
501 |
aatc |
504 |
Q |
| |
|
|||| |
|
|
| T |
9838507 |
aatc |
9838504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 504
Target Start/End: Complemental strand, 9849885 - 9849382
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |
|
|
| T |
9849885 |
attattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccctcata |
9849786 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9849785 |
tcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgt |
9849686 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| | ||||||| | | |||||||||||||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
9849685 |
tatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaagg |
9849586 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| | | ||||| |||||||||||||| |||||| || ||| |
|
|
| T |
9849585 |
tgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaa |
9849486 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||| |||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849485 |
ttgatctctttgtaaaaactattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
9849386 |
T |
|
| Q |
501 |
aatc |
504 |
Q |
| |
|
|||| |
|
|
| T |
9849385 |
aatc |
9849382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 10433967 - 10434474
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10433967 |
attattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggccttcaaa |
10434066 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
10434067 |
tcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttat |
10434166 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| | ||||| | ||| ||||||||||||||||||||| || ||||| ||||||||||| || ||||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
10434167 |
tatgagttgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttccttccaaccatgaaagattcattgaccacagaacttgaagg |
10434266 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| | ||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
10434267 |
atttctatgagaaactctcccacttttggtttgcagaccaagtatatctttattctgtgcaaaaagttgcaagctttcacacatgatcttcatttgagaa |
10434366 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||| |||| |
|
|
| T |
10434367 |
ttgatctctctgtagaaactattaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcatgtgtattctccaccttggatcgaaggg |
10434466 |
T |
|
| Q |
501 |
aatcataa |
508 |
Q |
| |
|
|||||||| |
|
|
| T |
10434467 |
aatcataa |
10434474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 10088933 - 10088429
Alignment:
| Q |
4 |
attgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatca |
103 |
Q |
| |
|
|||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10088933 |
attgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatca |
10088834 |
T |
|
| Q |
104 |
aaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
203 |
Q |
| |
|
||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
10088833 |
aaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgt |
10088734 |
T |
|
| Q |
204 |
gcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgt |
303 |
Q |
| |
|
| ||| ||| ||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
10088733 |
cggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatccttcctacccaccatgacagattcatttaccaccgaacttgaaggagt |
10088634 |
T |
|
| Q |
304 |
tctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattg |
403 |
Q |
| |
|
|||| | ||||| || | |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
10088633 |
tctatgtgaaacccttgcgattttagtttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattg |
10088534 |
T |
|
| Q |
404 |
atctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaat |
503 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
10088533 |
atctctctgtagaagctattaaaaggagatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaat |
10088434 |
T |
|
| Q |
504 |
cataa |
508 |
Q |
| |
|
||||| |
|
|
| T |
10088433 |
cataa |
10088429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 10195816 - 10195312
Alignment:
| Q |
4 |
attgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatca |
103 |
Q |
| |
|
|||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10195816 |
attgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatca |
10195717 |
T |
|
| Q |
104 |
aaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
203 |
Q |
| |
|
||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
10195716 |
aaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattattgt |
10195617 |
T |
|
| Q |
204 |
gcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgt |
303 |
Q |
| |
|
| ||| ||| ||| ||| ||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10195616 |
cggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatcctttctacccaccatgacagattcatttaccactgaacttgaaggagt |
10195517 |
T |
|
| Q |
304 |
tctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattg |
403 |
Q |
| |
|
|||| | ||||| || | |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
10195516 |
tctatgtgaaacccttgcgtttttagtttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattg |
10195417 |
T |
|
| Q |
404 |
atctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaat |
503 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
10195416 |
atctctctgtagaagctattaaaaggagatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaat |
10195317 |
T |
|
| Q |
504 |
cataa |
508 |
Q |
| |
|
||||| |
|
|
| T |
10195316 |
cataa |
10195312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 1 - 508
Target Start/End: Complemental strand, 11769380 - 11768873
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11769380 |
attattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgccttcaaa |
11769281 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||| ||||||||||| || ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769280 |
tcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
11769181 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||||| || ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11769180 |
tatggattgtgtctctctgtgatagcaacatgttcattattgtctctttgtcattcttcctacccactatgacagattcatttaccactgaacttgaagg |
11769081 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||| | ||||||||||| |||||||| | ||||||||| |||||||||| |||||| || ||| |
|
|
| T |
11769080 |
tgttctacgagaaactctagcacttttagtttgcaaacctaatatatctttattttgtgcaaaaagttgcaggctttcacacatgatcttcatatgggaa |
11768981 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
|||||||||| |||| | | |||||||| || ||||| |||||| |||||||||||||||||||| ||||| | ||||||| ||||||||| |||| |
|
|
| T |
11768980 |
ttgatctctccatagatgtttttaaaaggggatgaaagtaagttccacacctgattagttttgtttctagcttgtttcttctccatcttgcatcggaggg |
11768881 |
T |
|
| Q |
501 |
aatcataa |
508 |
Q |
| |
|
| |||||| |
|
|
| T |
11768880 |
agtcataa |
11768873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 4 - 504
Target Start/End: Complemental strand, 10077412 - 10076909
Alignment:
| Q |
4 |
attgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatca |
103 |
Q |
| |
|
|||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10077412 |
attgttatcccaagttctagaagtgatcgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcctgcaaatca |
10077313 |
T |
|
| Q |
104 |
aaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
203 |
Q |
| |
|
||||| | | ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10077312 |
aaatggtatcgaactttataatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatcttattat |
10077213 |
T |
|
| Q |
204 |
gcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgt |
303 |
Q |
| |
|
| | | | | || |||||||||||||||||||||| || ||||| ||| || | |||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10077212 |
gggttccgcccatccctgatagcaacatgttcattattgtctctttgtcacgctccataccaaccatctcagattcatttaccactgaacttgaaggtgt |
10077113 |
T |
|
| Q |
304 |
tctacgagaaa---ctctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||||||| |||||||| ||||||||| ||||||| || |||||||||| |||| |||||||| |
|
|
| T |
10077112 |
tctacgagaaattactctagcaattttagtttgcagaccaagtacatctttattctgtgcaaacaattgcaacctttcacacatgatcttcgtttgagaa |
10077013 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
10077012 |
ttgatctctttgtagaagctattaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcttgtgcattctccaccttgcatcgcagtg |
10076913 |
T |
|
| Q |
501 |
aatc |
504 |
Q |
| |
|
|||| |
|
|
| T |
10076912 |
aatc |
10076909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 504
Target Start/End: Complemental strand, 10580747 - 10580244
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||| ||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
10580747 |
attattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgccttcatg |
10580648 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580647 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
10580548 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| ||||| | ||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| || | ||| ||||||||||| |
|
|
| T |
10580547 |
tatggattgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcgttaaacacagaacttgaagg |
10580448 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
|||| | ||||||||||| |||| |||||||||| |||||| | |||||||| | |||||| ||||||||| | |||||||||| |||||| || ||| |
|
|
| T |
10580447 |
agttccatgagaaactctagcactcttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaa |
10580348 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
10580347 |
ttgatctctctatagaagctattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttgtgtattctccaccttgcatcgcaggg |
10580248 |
T |
|
| Q |
501 |
aatc |
504 |
Q |
| |
|
|||| |
|
|
| T |
10580247 |
aatc |
10580244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 10363721 - 10364228
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||| ||| | ||| | |||||| | ||||||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
10363721 |
attattgctttccgaagttatggaagtggcagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaa |
10363820 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10363821 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatattat |
10363920 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
| | | ||| ||| ||| ||| ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363921 |
tgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10364020 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||| ||||| || ||||||||||||| || |||||||||||| || | |||| ||||||||| |||||||||| |||||| || ||| |
|
|
| T |
10364021 |
tgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatcttttctcttttcaaaatgttgcaggctttcacacatgatcttcatctgggaa |
10364120 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
||||||||||| |||||| | || |||||||| ||||||||||| ||||||||||| || ||||| ||||| | | |||||| |||||||||||| |
|
|
| T |
10364121 |
ttgatctctctatagaagctattgaaaggagataaaaggaagttccacacctgattacttctgtttccagcttgtttactctccattgtgcatcgcaggg |
10364220 |
T |
|
| Q |
501 |
aatcataa |
508 |
Q |
| |
|
|||||||| |
|
|
| T |
10364221 |
aatcataa |
10364228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 10127074 - 10126750
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||| ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10127074 |
attattgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaa |
10126975 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126974 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacctatattat |
10126875 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126874 |
tatgggatgtgtctctctgagatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10126775 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccactt |
325 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
10126774 |
cagtctatgagaaactctaccactt |
10126750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 508
Target Start/End: Complemental strand, 8861432 - 8860925
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||| | ||||| | |||||||||||| |||||||| |||| || ||||| | |||||||||||||||| || |||||||||||||| || | | |
|
|
| T |
8861432 |
attattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaagcccatgctttgaga |
8861333 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||| || | |||||||||||||||||||||||||||||| ||||| || ||||| || | ||||||||| || ||||||||||||||||| ||||| | |
|
|
| T |
8861332 |
tcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatattgt |
8861233 |
T |
|
| Q |
201 |
tatgcgatgtgtctg-tctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaag |
299 |
Q |
| |
|
||| | ||| ||| |||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
8861232 |
tattcctagtg-ctgctctctgatagcaacatgttcattactgtctctttatcatcatttctaccaaccatgacagattcattaactactgaacttgaag |
8861134 |
T |
|
| Q |
300 |
gtgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgaga |
399 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| |||||| |||||||||| ||||| || | ||||| |||||||||||||| ||||||||| || |
|
|
| T |
8861133 |
gggttctacgagaaactttaccaattttagtttgcaaaccaaggatatctttatgttgtgcgaaaatttgcaagctatcacacatgatcttcatttggga |
8861034 |
T |
|
| Q |
400 |
attgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagg |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || || ||||||||||||||| | |
|
|
| T |
8861033 |
attgatctctctgtagaaggtgttaaaaggagaagaaaggaagttccacacctgattagttttgtttgcagcttgtgtatcctccaccttgcatcgtaat |
8860934 |
T |
|
| Q |
500 |
gaatcataa |
508 |
Q |
| |
|
||||||||| |
|
|
| T |
8860933 |
gaatcataa |
8860925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 5 - 325
Target Start/End: Complemental strand, 10032145 - 10031825
Alignment:
| Q |
5 |
ttgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaa |
104 |
Q |
| |
|
||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10032145 |
ttgctatccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggccttcaaatcaa |
10032046 |
T |
|
| Q |
105 |
aatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
204 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032045 |
aatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
10031946 |
T |
|
| Q |
205 |
cgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgtt |
304 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
10031945 |
ggatgcgtctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgagagattcatttaccactgaacttgaaggcagt |
10031846 |
T |
|
| Q |
305 |
ctacgagaaactctaccactt |
325 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
10031845 |
ctatgagaaactctaccactt |
10031825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 5 - 325
Target Start/End: Complemental strand, 10663668 - 10663348
Alignment:
| Q |
5 |
ttgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaa |
104 |
Q |
| |
|
||||||||||| ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10663668 |
ttgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaa |
10663569 |
T |
|
| Q |
105 |
aatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
204 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663568 |
aatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatg |
10663469 |
T |
|
| Q |
205 |
cgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgtt |
304 |
Q |
| |
|
| ||||||| ||| ||||||||||||||||||||| || ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
10663468 |
ggttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccatgagagattcatttaccactgaacttgaaggcagt |
10663369 |
T |
|
| Q |
305 |
ctacgagaaactctaccactt |
325 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
10663368 |
ctatgagaaactctaccactt |
10663348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 497
Target Start/End: Complemental strand, 10889452 - 10888956
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||| | ||||| | ||||||||| || |||||||| |||| || ||||| | |||||||||||||||||||| |||||||||||||| || | | |
|
|
| T |
10889452 |
attattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttgaga |
10889353 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||| || | |||||||||||||||||||||||||||||| ||||| || ||||| || | ||||||||| || ||||||||||||||||| ||||| | |
|
|
| T |
10889352 |
tcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatattgt |
10889253 |
T |
|
| Q |
201 |
tatgcgatgtgtctg-tctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaag |
299 |
Q |
| |
|
||| | ||| ||| ||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
10889252 |
tattcctagtg-ctgctctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagattcattaactactgaacttgaag |
10889154 |
T |
|
| Q |
300 |
gtgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgaga |
399 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| |||||| |||||||||| |||||||| | ||||| ||||| |||||||| ||||||||| || |
|
|
| T |
10889153 |
gggttctacgagaaactttaccaattttagtttgcaaaccaaggatatctttatgttgtgcaaaaagttgcaagctattacacatgatcttcatttggga |
10889054 |
T |
|
| Q |
400 |
attgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgca |
497 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| | || || |||||||||||||||||||| |
|
|
| T |
10889053 |
attgatctctctgtagaaggtgttaaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgca |
10888956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 10184388 - 10184064
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||| | |
|
|
| T |
10184388 |
attattgctatcccaagttgtggaagtgacagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccctcata |
10184289 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10184288 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatagcat |
10184189 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| | ||||||| ||| ||| ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184188 |
tatgggttgtgtctctctgtgacagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10184089 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccactt |
325 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
10184088 |
cagtctatgagaaactctaccactt |
10184064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 10260844 - 10260520
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10260844 |
attattgatatcccaatttctagaagtgactgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgccttcatg |
10260745 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260744 |
tcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
10260645 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
| | | ||| ||| ||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260644 |
tgttggttgtttctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10260545 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccactt |
325 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
10260544 |
cagtctatgagaaactctaccactt |
10260520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 508
Target Start/End: Original strand, 11159940 - 11160447
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||| | ||||| | |||||||||||| |||||||| |||| || ||||| |||||||||||||||||||| |||||||||||||| || ||| |
|
|
| T |
11159940 |
attattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaagcccatgctttgaaa |
11160039 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||||| ||||| || ||||| || | ||||||||| || |||||||||||||| |||||||| | |
|
|
| T |
11160040 |
tcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacgcctatattgt |
11160139 |
T |
|
| Q |
201 |
tat-gcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaag |
299 |
Q |
| |
|
||| || | ||| ||||||||||||||||||||||||| || ||||||||||| || ||||| |||||||||||| |||| || ||||||||||||| |
|
|
| T |
11160140 |
tattgcca-gtgctactctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagatgcattaactactgaacttgaag |
11160238 |
T |
|
| Q |
300 |
gtgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgaga |
399 |
Q |
| |
|
| ||||||||||||||| ||||| ||||| |||||| |||||| |||||||||| ||||| || | ||||| |||||||||||||| ||||||||| || |
|
|
| T |
11160239 |
gggttctacgagaaactttaccaattttactttgcaaaccaaggatatctttatgttgtgcgaaaagttgcaagctatcacacatgatcttcatttggga |
11160338 |
T |
|
| Q |
400 |
attgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagg |
499 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| || |||||||| ||||||||||| | || || ||||||||||||||||||||| |
|
|
| T |
11160339 |
attgatctctctatagaaggtgttaaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagt |
11160438 |
T |
|
| Q |
500 |
gaatcataa |
508 |
Q |
| |
|
|| |||||| |
|
|
| T |
11160439 |
gattcataa |
11160447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 508
Target Start/End: Original strand, 11148796 - 11149284
Alignment:
| Q |
20 |
cttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactt |
119 |
Q |
| |
|
||||||||||| ||||||||||||| || |||||||| ||||||||||||||||| || |||||||||||||| || | |||||| |||| |||||||| |
|
|
| T |
11148796 |
cttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactt |
11148895 |
T |
|
| Q |
120 |
tttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat-gcgatgtgtctg-tc |
217 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||| |||||||| | ||||||||| || ||||||||||||||||| ||||| |||| || | ||| ||| || |
|
|
| T |
11148896 |
tttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgatattgttattgcta-gtg-ctgctc |
11148993 |
T |
|
| Q |
218 |
tctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactc |
317 |
Q |
| |
|
| |||||||||||||||| |||| | ||||| |||||||| ||||| ||||||| |||||||| ||||| ||||| |||||||||||| | ||| || |
|
|
| T |
11148994 |
tttgatagcaacatgttcgttattatctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaactagaaggtgttctatggaaaattc |
11149093 |
T |
|
| Q |
318 |
taccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaa |
417 |
Q |
| |
|
|| ||||||||||||||| |||||| |||||||| | |||||||| | ||||||| | ||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
11149094 |
tagcacttttagtttgcaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttcatttgggaattgatctctctgtagat |
11149193 |
T |
|
| Q |
418 |
ggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcataa |
508 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| ||||||||||| | || || ||||||||||||||||||||| || |||||| |
|
|
| T |
11149194 |
ggtgttaaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagtgattcataa |
11149284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 508
Target Start/End: Original strand, 11130968 - 11131456
Alignment:
| Q |
20 |
cttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactt |
119 |
Q |
| |
|
||||||||||| ||||||||||||| || |||||||| ||||||||||||||||| || |||||||||||||| || | |||||| |||| |||||||| |
|
|
| T |
11130968 |
cttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactt |
11131067 |
T |
|
| Q |
120 |
tttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat-gcgatgtgtctg-tc |
217 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||| |||||||| | ||||||||| || ||||||||||||||||| ||||| |||| || | ||| ||| || |
|
|
| T |
11131068 |
tttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgatattgttattgcta-gtg-ctgctc |
11131165 |
T |
|
| Q |
218 |
tctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactc |
317 |
Q |
| |
|
| |||||||||||||||| |||| || ||||| |||||||| ||||| ||||||| |||||||| ||||| ||||| |||||||||||| | ||| || |
|
|
| T |
11131166 |
tttgatagcaacatgttcgttattgtctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaactagaaggtgttctatggaaaattc |
11131265 |
T |
|
| Q |
318 |
taccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaa |
417 |
Q |
| |
|
|| ||||||||||||| | |||||| |||||||| | |||||||| | ||||||| | ||||||||| ||| ||||| ||||||||||||| |||| |
|
|
| T |
11131266 |
tagcacttttagtttgtaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttaatttgggaattgatctctccatagat |
11131365 |
T |
|
| Q |
418 |
ggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcataa |
508 |
Q |
| |
|
| | |||||||||||||||||||||||| | |||||||||||||||||| ||||| || ||||||||||||||||||||| || |||||| |
|
|
| T |
11131366 |
gtttttaaaaggagaagaaaggaagttccagacctgattagttttgtttgcagcttgtgtattctccaccttgcatcgcagtgactcataa |
11131456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 32 - 325
Target Start/End: Complemental strand, 10500671 - 10500375
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || ||| |||||||| | |||||| ||||||||||| ||||||||||| || || ||| || || |||| |
|
|
| T |
10500671 |
gattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgt |
10500572 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat----gcgatgtgtctgtctctgatagca |
227 |
Q |
| |
|
|||||||||| ||||| || ||||| || | |||||||| |||||||||||||||||||||| |||||||| || ||| | | ||||||| || |
|
|
| T |
10500571 |
aaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattatttctgcc-tgttccaatatctgatacca |
10500473 |
T |
|
| Q |
228 |
acatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
325 |
Q |
| |
|
|||| || | | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10500472 |
acatattgacgagtctatctttatcatcattcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
10500375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 32 - 325
Target Start/End: Complemental strand, 10527452 - 10527157
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||| |||||||| || ||| || |||| ||||| | ||||||||| |||| ||| ||||||||||||| |
|
|
| T |
10527452 |
gattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcattgt |
10527353 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatta-tgcga--tgtgtctgtctctgatagcaa |
228 |
Q |
| |
|
|||||||||| |||||||| ||||| || | ||||||||| ||||| |||||||||||||||| ||||||| | | | ||| | ||||||| ||| |
|
|
| T |
10527352 |
aaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattatttctactggtgccacagtctgataccaa |
10527253 |
T |
|
| Q |
229 |
catgttcattatagt-gtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
325 |
Q |
| |
|
||| || || ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |
|
|
| T |
10527252 |
catattgat--gagtcatctttatcatcattcctacccacaatgacagattcatttaccactgaacttgaaggggttctacgagaaaatctatcactt |
10527157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 50 - 501
Target Start/End: Complemental strand, 13289762 - 13289311
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13289663 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| ||||||||||| || ||||| ||| || ||| | ||| | | || |||| |||||| | || | | ||||| |
|
|
| T |
13289662 |
tggttttgccaacaccgcccatacccaaaattgcgaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13289563 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
||||||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||| |||||||||| || || |||||||| ||||| |||||| |
|
|
| T |
13289562 |
atcatccttcctaccaaccataacagatttatttaccattgaacttgaaggcgttctaagagaaactctccctctcacagtttgcaagccaaggatatct |
13289463 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | ||||| || | |||||| | ||||||||| ||||||||||||| |||| || ||||||||||| |||| || |||| | | |
|
|
| T |
13289462 |
ctctgttgtgcaaaaagctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagagttttaaaaggagatgaaaagaggttccaaa |
13289363 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| ||||| | ||||||||||| ||||||||||| |
|
|
| T |
13289362 |
cctgattagtcatgttttcagcttgtttcttctccaccttacatcgcaggga |
13289311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 50 - 501
Target Start/End: Complemental strand, 13333001 - 13332550
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| | | || ||| | ||| | | || |||| |||||| | || | | ||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaacactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13332802 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||| |||||||||| | || |||||||| ||||| |||||| |
|
|
| T |
13332801 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttctaagagaaactctcgcgctcacagtttgcaagccaagaatatct |
13332702 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | |||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||||||||| |||| || |||| | | |
|
|
| T |
13332701 |
ctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagacgaaaagaggttccaaa |
13332602 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| ||||| | ||||||||||| ||||||||||| |
|
|
| T |
13332601 |
cctgattagtcatgttttcagcttgtttcttctccaccttacatcgcaggga |
13332550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 53 - 501
Target Start/End: Complemental strand, 13344183 - 13343735
Alignment:
| Q |
53 |
actctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtag |
152 |
Q |
| |
|
||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| || | |
|
|
| T |
13344183 |
actctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtgg |
13344084 |
T |
|
| Q |
153 |
tttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatc |
252 |
Q |
| |
|
|||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | || |||| |||||| | || | | |||||||| |
|
|
| T |
13344083 |
ttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatc |
13343984 |
T |
|
| Q |
253 |
atccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatcttta |
352 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||| || || |||||||| ||||| |||||| | |
|
|
| T |
13343983 |
atccttcctaccaaccataacagattcatttaccattgaacttgaaggtgttcttagagaaactctcccgctcacagtttgcaagccaaggatatctctc |
13343884 |
T |
|
| Q |
353 |
tactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacct |
452 |
Q |
| |
|
| |||||||| | ||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||| ||||| |||| || |||| | |||| |
|
|
| T |
13343883 |
tgttgtgcaaaaatctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaacggagacgaaaagaggttccaaacct |
13343784 |
T |
|
| Q |
453 |
gattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
||||||| |||||| ||||| | ||||||||| | ||||||||||| |
|
|
| T |
13343783 |
gattagtcatgttttcagcttgtttcttctccaccgtacatcgcaggga |
13343735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 32 - 325
Target Start/End: Complemental strand, 10517579 - 10517283
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
|||||||||| |||||||||| |||| | || ||||||||||||||| |||||| |||| || || |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10517579 |
gattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
10517480 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatta----tgcgatgtgtctgtctctgatagca |
227 |
Q |
| |
|
|||||| || |||||||| ||||| || | |||||||| |||| ||||||| ||||||||| ||||||| ||| |||| | ||||||| || |
|
|
| T |
10517479 |
aaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattatttctgc-ttgtgccaacatctgatacca |
10517381 |
T |
|
| Q |
228 |
acatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
325 |
Q |
| |
|
|||| || || | | ||||||||||| ||||||||||||| | |||||||||||| ||| ||||||||| | |||||| |||||||| ||||||| |
|
|
| T |
10517380 |
acatattgatgagtctatctttatcatcattcctacccaccacgtcagattcatttagcaccgaacttgaaagggttctagaagaaactccaccactt |
10517283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 50 - 501
Target Start/End: Complemental strand, 13161077 - 13160626
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | || |||| |||||| | | | | || || |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaacgagtctctcctt |
13160878 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |||||||||| | || |||||||| ||||| |||||| |
|
|
| T |
13160877 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcgcgctcacagtttgcaagccaaggatatct |
13160778 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | |||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||||||||| |||| || |||| | | |
|
|
| T |
13160777 |
ctttgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagatgaaaagaggttccaaa |
13160678 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| ||||| | ||||||||| | ||||||||||| |
|
|
| T |
13160677 |
cctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcaggga |
13160626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 50 - 501
Target Start/End: Complemental strand, 13171128 - 13170677
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | || |||| |||||| | || | | ||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13170929 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||| |||||||||||| ||||| |||||||||| || || |||||||| ||||| |||||| |
|
|
| T |
13170928 |
atcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatct |
13170829 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | |||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||||||| | |||| || |||| | | |
|
|
| T |
13170828 |
ctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggacatgaaaagaggttccaaa |
13170729 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| || || | ||||||||||| ||||| ||||| |
|
|
| T |
13170728 |
cctgattagtcatgttttcagattgtatcttctccaccttacatcggaggga |
13170677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 325
Target Start/End: Original strand, 11781957 - 11782253
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
|||||||||||||||||||||| ||| | || ||| |||||||| || |||||| |||| | || |||||||||||||||| |||||| ||||||||| |
|
|
| T |
11781957 |
gattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgt |
11782056 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatta--tgcgatgtgtctg-tctctgatagcaa |
228 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| ||||||||||| |||||||||| ||||||| | | || ||| ||||||| || |
|
|
| T |
11782057 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattatttctgctggtgctgcggtctgatatcag |
11782156 |
T |
|
| Q |
229 |
catgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
325 |
Q |
| |
|
||| || || | | ||||||||||| ||||||||||||| | |||||| ||||| ||||||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
11782157 |
catattgatgagtctatctttatcatcattcctacccaccacgtcagattgatttagcactgaacttgaaggggttctagaagaaactccaccactt |
11782253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Complemental strand, 26907043 - 26906536
Alignment:
| Q |
1 |
attattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaa |
100 |
Q |
| |
|
||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26907043 |
attattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaa |
26906944 |
T |
|
| Q |
101 |
tcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
200 |
Q |
| |
|
|||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26906943 |
tcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattat |
26906844 |
T |
|
| Q |
201 |
tatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
300 |
Q |
| |
|
|||| | ||||||| |||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26906843 |
tatgggttgtgtctctctctgatagcaacatattcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
26906744 |
T |
|
| Q |
301 |
tgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaa |
400 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| ||||||||||| |||||||| | ||||||||||||| |
|
|
| T |
26906743 |
tgttctacgagaaactctagcacttttagtttgcaaaccaaggatatctttatgttgtgcaaacaattgcaggctttcacacattatcttcatttgagaa |
26906644 |
T |
|
| Q |
401 |
ttgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggg |
500 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||| |
|
|
| T |
26906643 |
ttgatctctctgtagaagctattaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcttgtgtattctcgactttgcatcgcaggg |
26906544 |
T |
|
| Q |
501 |
aatcataa |
508 |
Q |
| |
|
|||||||| |
|
|
| T |
26906543 |
aatcataa |
26906536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 123; Significance: 6e-63; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 245 - 507
Target Start/End: Original strand, 44957876 - 44958138
Alignment:
| Q |
245 |
tctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagta |
344 |
Q |
| |
|
|||||||||| ||||| |||||||| | ||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||| || ||||| || |
|
|
| T |
44957876 |
tctttatcatgtttcctgcccaccataatagattcattaacccctgaacttgaaggtgttctatgagaaactctagcacttttagtttccaaaccaatta |
44957975 |
T |
|
| Q |
345 |
tatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagtt |
444 |
Q |
| |
|
||||||||| ||||||||| | ||||||| |||||||| | ||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||| |
|
|
| T |
44957976 |
tatctttatgctgtgcaaaaagttgcagggattcacacataatcttcatttgagaattgatctctccatagaagtttttaaaaggagatgaaaggaagtt |
44958075 |
T |
|
| Q |
445 |
caacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcata |
507 |
Q |
| |
|
| | ||||||||||||||||| | ||| || ||||||||| ||||| |||||||||||||| |
|
|
| T |
44958076 |
ccagacctgattagttttgttggcaacttgtgtattctccactttgcaacgcagggaatcata |
44958138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 11485132 - 11484961
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
||||||||||| |||||||||| |||| | ||| |||||||| || |||||| ||||||| || | ||||||||| |||| |||||||||||| |||| |
|
|
| T |
11485132 |
gattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgt |
11485033 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
203 |
Q |
| |
|
|||||||||| |||||||| ||||| || | |||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
11485032 |
aaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattat |
11484961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 11484916 - 11484840
Alignment:
| Q |
245 |
tctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctacc |
321 |
Q |
| |
|
|||||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11484916 |
tctttatcttcattccttcccaccataacagattcattcaccactgaacttgatggtgttctacgagaaactctacc |
11484840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 44957664 - 44957834
Alignment:
| Q |
33 |
attcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgta |
132 |
Q |
| |
|
||||||| |||||||| |||| ||| | || || |||||||| || ||||| |||||| || | ||| |||||||||| ||||||| ||||||||| |
|
|
| T |
44957664 |
attcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgta |
44957763 |
T |
|
| Q |
133 |
aacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattat |
203 |
Q |
| |
|
||||||||| || || || ||||| || | ||||||||| || || | ||||||||||||| |||||||| |
|
|
| T |
44957764 |
aacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattat |
44957834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 251 - 508
Target Start/End: Original strand, 49981 - 50235
Alignment:
| Q |
251 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatctt |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| || ||||||||||| |
|
|
| T |
49981 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatctt |
50080 |
T |
|
| Q |
351 |
tatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaacac |
450 |
Q |
| |
|
| | | |||| | ||||||||| |||||||||| |||||| || ||||||||||||| | || | ||||||| ||| |||| |||||||| ||| |
|
|
| T |
50081 |
ttcttttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctccat---agtttttaaaagaagatgaaaagaagttcatcac |
50177 |
T |
|
| Q |
451 |
ctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcataa |
508 |
Q |
| |
|
||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50178 |
ctgataaattttgctttgagcttttgcattctccaccttgcatcgcagggaatcataa |
50235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 32 - 325
Target Start/End: Original strand, 17852898 - 17853194
Alignment:
| Q |
32 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||| || || |||||| |||| || || | ||||||||| |||| ||| ||||||||||||| |
|
|
| T |
17852898 |
gattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgt |
17852997 |
T |
|
| Q |
132 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatta--tgcgat-gtgtctgtctctgatagcaa |
228 |
Q |
| |
|
||||||| || |||||||| ||||| || | ||||||||| ||||| |||||||||||||||| ||| ||| | | | ||| || | ||||||| || |
|
|
| T |
17852998 |
aaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttatttatgctggtgcctatgtctgataccag |
17853097 |
T |
|
| Q |
229 |
catgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
325 |
Q |
| |
|
||| | | | | | ||||||||| ||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17853098 |
catactgacaagtctatttttatcatcattccttcctaccatgacagattcatttaccacggaacttgaaggggttctacgagaaactctaccactt |
17853194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 7128961 - 7129044
Alignment:
| Q |
64 |
atcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaag |
147 |
Q |
| |
|
||||||||| ||||| |||||| ||||| ||||| |||||||||||||| |||| || |||||||| |||||||| ||||| |
|
|
| T |
7128961 |
atcaaaatcatcagaaacacaaacccattttttcaactcaaaatgttgttgcacttctttgtcattgtatacaagttgagcaag |
7129044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 50 - 501
Target Start/End: Original strand, 145911 - 146362
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | || |||| |||||| | || | | ||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
146110 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |||||||||| || || |||||||| ||||| |||||| |
|
|
| T |
146111 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatct |
146210 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | |||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||||||||| |||| || |||| | | |
|
|
| T |
146211 |
ctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagatgaaaagaggttccaaa |
146310 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| ||||| | ||||||||| | ||||||||||| |
|
|
| T |
146311 |
cctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcaggga |
146362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 50 - 501
Target Start/End: Original strand, 135860 - 136311
Alignment:
| Q |
50 |
gttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaaggg |
149 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| |||| | |||| ||||||||| | |||||||| || |||||| |||| |||||||||||| | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
150 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtcttt |
249 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| ||| || ||| | ||| | | || |||| |||||| | || | | ||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
136059 |
T |
|
| Q |
250 |
atcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatct |
349 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||| |||||||||||| ||||| |||||||||| || || |||||||| ||||| |||||| |
|
|
| T |
136060 |
atcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaaggatatct |
136159 |
T |
|
| Q |
350 |
ttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttcaaca |
449 |
Q |
| |
|
| | |||||||| | |||||| || | |||||| | ||||||||| ||||||||||||| |||| | ||||||||| | |||| || |||| | | |
|
|
| T |
136160 |
ctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggacatgaaaagaggttccaaa |
136259 |
T |
|
| Q |
450 |
cctgattagttttgttttgagcttttgcattctccaccttgcatcgcaggga |
501 |
Q |
| |
|
|||||||||| |||||| || || | ||||||||||| ||||| ||||| |
|
|
| T |
136260 |
cctgattagtcatgttttcagattgtatcttctccaccttacatcggaggga |
136311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 285
Target Start/End: Complemental strand, 29836788 - 29836511
Alignment:
| Q |
2 |
ttattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaat |
101 |
Q |
| |
|
|||||| ||| |||| |||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||| | | | || |
|
|
| T |
29836788 |
ttattggtattccattctcttgaagtgacaacttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacat |
29836689 |
T |
|
| Q |
102 |
caaaatgttgttgaactttttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattatt |
201 |
Q |
| |
|
||||||| | || ||||| ||| | ||||| | |||| | || ||||| ||||| || | |||||||||||| |||||| || |||||||||||||| |
|
|
| T |
29836688 |
caaaatgatttttaacttcttcctggttgtatataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctatattatt |
29836589 |
T |
|
| Q |
202 |
atgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttac |
285 |
Q |
| |
|
|| ||||||| ||||||| |||||| || | || |||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
29836588 |
at------tgtctgtatctgatatcaacatattaactagttcctctttatcatccttcctaccaaccgtgacatattcatttac |
29836511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 48 - 454
Target Start/End: Original strand, 31679703 - 31680109
Alignment:
| Q |
48 |
tggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcaag |
147 |
Q |
| |
|
||||||| ||||||| |||||| || || |||| |||| |||| || || | ||||||| ||| |||||| | || ||||||||||| |||||| || || |
|
|
| T |
31679703 |
tggttaccctcaaaacatcaaactcttcggacagacaaacccaagcttttacatcaaaacgttcttgaacatctttatcattgtaaagaagttgagctag |
31679802 |
T |
|
| Q |
148 |
ggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattattatgcgatgtgtctgtc-tctgatagcaacatgttcattatagtgtc |
246 |
Q |
| |
|
|| ||||| || | |||||||||||| ||||||| ||||||| ||||||| || ||| || | |||||||||||||| || ||| | || |
|
|
| T |
31679803 |
ggctgttttaccgacacctcccatgccgaaaattgaaacaacattaatattatcattgacagtg-ctaacatctgatagcaacatattagttagtttctc |
31679901 |
T |
|
| Q |
247 |
tttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtata |
346 |
Q |
| |
|
||||||| ||||||||| ||||||| ||||| || ||| | ||||||||||||||||||| || |||| ||||||||| |||||||| ||||| ||| |
|
|
| T |
31679902 |
tttatcactcttcctaccaaccatgaaagattgatctactagtgaacttgaaggtgttctaagaaaaaccctaccacttacagtttgcaacccaaggata |
31680001 |
T |
|
| Q |
347 |
tctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaaggagaagaaaggaagttca |
446 |
Q |
| |
|
||||| | |||||||| | ||| || || ||| ||| ||||||||| ||||||||||||| || ||| | | ||||||||| |||||||| ||| |
|
|
| T |
31680002 |
tctttttgttgtgcaaaaagttggagcctttcaatcatactcttcatttgggaattgatctctccatacaagttttgaaaaggagatgaaaggaaattcc |
31680101 |
T |
|
| Q |
447 |
acacctga |
454 |
Q |
| |
|
| |||||| |
|
|
| T |
31680102 |
aaacctga |
31680109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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