View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7851_low_9 (Length: 420)
Name: NF7851_low_9
Description: NF7851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7851_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 23 - 403
Target Start/End: Complemental strand, 34671448 - 34671068
Alignment:
| Q |
23 |
ggcgggttatgatctttggtagcaaattggttaggatttgaaatagtgtgtcgcagttttctttacaagcatctcgcgcattttggtgctttagagggtt |
122 |
Q |
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| T |
34671448 |
ggcgggttatgatctttggtagcaaattggttaggatttgaaatagtgtgtcacagttttctttacaagcatctcgcgcattttggtgctctagagggtt |
34671349 |
T |
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| Q |
123 |
atttgaaaagagattagatgtctttgaataaaattccctattaagtatctttatgataatccatttgaattagtttgatggtgttggtttaagatcttgg |
222 |
Q |
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| T |
34671348 |
atttgaaaagagattagatatctttgaataaaattccctattaagtttctttatgataatccatttgaattagtttggtggtgttggtttaagatcttgg |
34671249 |
T |
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| Q |
223 |
agtaagttcctctttgagtgggttcctcttaattaaagtctctgatttggttgtctccgatattaatttcggtgggctaatttaattatnnnnnnnngaa |
322 |
Q |
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| T |
34671248 |
agtaagttcctctttaagtggattcctcttaattaaagtctctgatttgattgtctccgatattaattttgatgggctaatttaattttaaaaaaaaaaa |
34671149 |
T |
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| Q |
323 |
gacattgctatatggtattatgtaatnnnnnnntataatttgctttattcaaaccaactacgatggtagagttagaataaa |
403 |
Q |
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||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34671148 |
gacattgctatatggtattctgtaataaaaaaatataatttgctttattcaaaccaactacgatggtagagttagaataaa |
34671068 |
T |
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