View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7856_high_1 (Length: 320)

Name: NF7856_high_1
Description: NF7856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7856_high_1
NF7856_high_1
[»] chr6 (58 HSPs)
chr6 (12-320)||(22831524-22831834)
chr6 (17-320)||(16920422-16920725)
chr6 (2-320)||(20360749-20361070)
chr6 (1-319)||(20638073-20638394)
chr6 (10-320)||(11185524-11185834)
chr6 (1-320)||(29060550-29060873)
chr6 (1-320)||(25629143-25629466)
chr6 (1-319)||(22780017-22780338)
chr6 (1-320)||(18409615-18409938)
chr6 (5-320)||(17287585-17287903)
chr6 (1-163)||(35245596-35245758)
chr6 (1-320)||(20593783-20594106)
chr6 (1-320)||(19303329-19303651)
chr6 (1-142)||(16496254-16496397)
chr6 (212-320)||(18821608-18821716)
chr6 (1-149)||(20076710-20076857)
chr6 (5-140)||(1540926-1541062)
chr6 (40-163)||(27415887-27416011)
chr6 (5-89)||(25656640-25656725)
chr6 (5-89)||(25688513-25688598)
chr6 (5-89)||(22782238-22782323)
chr6 (5-140)||(12742328-12742464)
chr6 (5-140)||(18334607-18334743)
chr6 (5-140)||(19005057-19005193)
chr6 (5-140)||(19858934-19859070)
chr6 (5-140)||(24422558-24422694)
chr6 (5-140)||(25754820-25754956)
chr6 (5-140)||(30676725-30676861)
chr6 (5-140)||(33861805-33861941)
chr6 (5-140)||(33864289-33864425)
chr6 (5-104)||(1595560-1595660)
chr6 (5-140)||(2291195-2291331)
chr6 (5-140)||(8055040-8055176)
chr6 (5-140)||(26924655-26924791)
chr6 (5-140)||(34963384-34963520)
chr6 (5-61)||(27333268-27333325)
chr6 (5-61)||(27394008-27394065)
chr6 (6-61)||(25644335-25644391)
chr6 (5-89)||(16448593-16448678)
chr6 (5-52)||(25714431-25714478)
chr6 (10-140)||(18456735-18456866)
chr6 (10-140)||(18461895-18462026)
chr6 (6-61)||(9098564-9098620)
chr6 (5-52)||(3852121-3852168)
chr6 (3-61)||(19652207-19652266)
chr6 (5-52)||(20556996-20557043)
chr6 (10-52)||(18821904-18821946)
chr6 (8-61)||(28496521-28496575)
chr6 (8-61)||(29808932-29808986)
chr6 (12-61)||(33443068-33443117)
chr6 (5-110)||(19847995-19848102)
chr6 (6-61)||(20109153-20109209)
chr6 (3-61)||(4185871-4185930)
chr6 (234-276)||(18456961-18457003)
chr6 (6-55)||(19668386-19668436)
chr6 (18-59)||(21766718-21766759)
chr6 (5-99)||(23992441-23992537)
chr6 (18-115)||(15041545-15041644)
[»] chr2 (57 HSPs)
chr2 (1-320)||(20309118-20309437)
chr2 (1-320)||(37905-38225)
chr2 (1-320)||(23285875-23286193)
chr2 (1-307)||(23654188-23654497)
chr2 (5-320)||(298603-298922)
chr2 (5-320)||(22737969-22738286)
chr2 (1-319)||(22731023-22731345)
chr2 (1-320)||(23076452-23076774)
chr2 (1-320)||(22337125-22337448)
chr2 (1-320)||(23660033-23660355)
chr2 (1-292)||(23060523-23060815)
chr2 (182-320)||(32451718-32451856)
chr2 (143-320)||(27753730-27753907)
chr2 (1-108)||(23103399-23103506)
chr2 (5-140)||(22105423-22105560)
chr2 (77-204)||(40622114-40622244)
chr2 (5-140)||(21155075-21155211)
chr2 (1-67)||(8946667-8946733)
chr2 (5-140)||(18808954-18809090)
chr2 (5-140)||(23130873-23131009)
chr2 (5-140)||(23133340-23133476)
chr2 (5-140)||(23135601-23135737)
chr2 (5-140)||(23709547-23709683)
chr2 (5-140)||(23712028-23712164)
chr2 (5-140)||(24367785-24367921)
chr2 (5-140)||(26505390-26505526)
chr2 (5-140)||(26507868-26508004)
chr2 (5-140)||(32214936-32215072)
chr2 (5-140)||(34402537-34402673)
chr2 (5-140)||(39682324-39682460)
chr2 (1-54)||(23040247-23040300)
chr2 (5-89)||(571408-571493)
chr2 (5-89)||(6726006-6726091)
chr2 (6-320)||(23708406-23708725)
chr2 (5-52)||(24643054-24643101)
chr2 (5-140)||(24898210-24898347)
chr2 (5-140)||(24900693-24900830)
chr2 (5-140)||(24903170-24903307)
chr2 (5-140)||(24905647-24905784)
chr2 (5-140)||(24908122-24908259)
chr2 (3-61)||(28405988-28406047)
chr2 (5-52)||(43137310-43137357)
chr2 (3-61)||(22134257-22134315)
chr2 (5-51)||(28577110-28577156)
chr2 (5-140)||(32039513-32039649)
chr2 (5-61)||(7679599-7679656)
chr2 (5-110)||(25616199-25616306)
chr2 (5-146)||(45029863-45030005)
chr2 (5-89)||(24529595-24529680)
chr2 (3-61)||(25175862-25175921)
chr2 (1-61)||(23071999-23072060)
chr2 (12-61)||(23287384-23287433)
chr2 (5-46)||(38967385-38967426)
chr2 (6-61)||(18786953-18787009)
chr2 (12-60)||(26392403-26392451)
chr2 (9-61)||(19671848-19671901)
chr2 (10-61)||(23207296-23207348)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-320)||(32077-32396)
[»] scaffold0106 (3 HSPs)
scaffold0106 (1-320)||(1299-1618)
scaffold0106 (1-320)||(7276-7595)
scaffold0106 (5-59)||(15291-15345)
[»] chr7 (61 HSPs)
chr7 (1-320)||(40443401-40443721)
chr7 (1-320)||(27847622-27847941)
chr7 (1-320)||(9509199-9509521)
chr7 (7-320)||(10589055-10589370)
chr7 (1-320)||(12698841-12699164)
chr7 (1-320)||(26212006-26212328)
chr7 (1-318)||(16386038-16386359)
chr7 (1-320)||(38227491-38227813)
chr7 (1-317)||(3564155-3564475)
chr7 (5-203)||(18456319-18456519)
chr7 (91-204)||(12187115-12187227)
chr7 (91-204)||(17137969-17138081)
chr7 (6-320)||(15143825-15144143)
chr7 (5-108)||(48273403-48273508)
chr7 (10-140)||(13647344-13647476)
chr7 (5-140)||(16213695-16213831)
chr7 (5-140)||(24275182-24275318)
chr7 (5-140)||(456332-456468)
chr7 (5-140)||(11393302-11393438)
chr7 (5-140)||(11972507-11972643)
chr7 (5-140)||(14949137-14949273)
chr7 (5-140)||(15376728-15376864)
chr7 (5-140)||(16232531-16232667)
chr7 (5-140)||(18640283-18640419)
chr7 (5-140)||(20385138-20385274)
chr7 (5-140)||(21189610-21189746)
chr7 (5-140)||(32125502-32125638)
chr7 (5-140)||(41522928-41523064)
chr7 (5-140)||(41525390-41525526)
chr7 (40-109)||(2530139-2530208)
chr7 (5-89)||(16410070-16410155)
chr7 (5-140)||(18430723-18430859)
chr7 (5-140)||(24702249-24702385)
chr7 (5-140)||(27216871-27217007)
chr7 (5-61)||(67759-67816)
chr7 (1-61)||(28505348-28505409)
chr7 (1-61)||(34200796-34200857)
chr7 (3-61)||(811181-811240)
chr7 (5-52)||(3386344-3386391)
chr7 (5-89)||(13869357-13869442)
chr7 (3-61)||(18005658-18005717)
chr7 (5-52)||(24704699-24704746)
chr7 (3-61)||(44014190-44014249)
chr7 (5-89)||(44116520-44116605)
chr7 (225-320)||(17061748-17061844)
chr7 (6-108)||(2280121-2280225)
chr7 (5-48)||(20110567-20110610)
chr7 (6-110)||(16219717-16219823)
chr7 (5-89)||(17061981-17062066)
chr7 (9-59)||(18154894-18154944)
chr7 (1-61)||(16495412-16495473)
chr7 (5-61)||(47831821-47831878)
chr7 (225-276)||(12756549-12756600)
chr7 (5-52)||(13831384-13831431)
chr7 (6-108)||(16056343-16056446)
chr7 (10-61)||(18203831-18203882)
chr7 (5-89)||(38898443-38898528)
chr7 (6-61)||(1868045-1868101)
chr7 (6-61)||(14044761-14044817)
chr7 (6-61)||(14354791-14354847)
chr7 (10-61)||(20220238-20220290)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-320)||(16292-16611)
[»] chr8 (57 HSPs)
chr8 (1-314)||(45130793-45131107)
chr8 (1-317)||(16199438-16199755)
chr8 (1-320)||(31971267-31971587)
chr8 (1-320)||(21918789-21919111)
chr8 (1-320)||(20536218-20536540)
chr8 (1-320)||(18879026-18879342)
chr8 (1-320)||(18818198-18818520)
chr8 (1-209)||(21389353-21389561)
chr8 (1-196)||(21395896-21396091)
chr8 (1-196)||(21790389-21790584)
chr8 (1-191)||(21778697-21778887)
chr8 (1-320)||(21923717-21924039)
chr8 (1-320)||(22626746-22627068)
chr8 (1-320)||(28648832-28649155)
chr8 (1-306)||(7372788-7373088)
chr8 (5-320)||(23648567-23648886)
chr8 (1-320)||(23406389-23406713)
chr8 (1-320)||(6759268-6759589)
chr8 (1-320)||(16092129-16092453)
chr8 (1-320)||(22875075-22875398)
chr8 (127-320)||(25362929-25363123)
chr8 (5-140)||(14409459-14409595)
chr8 (5-140)||(16413331-16413467)
chr8 (5-108)||(26219728-26219831)
chr8 (5-140)||(1484413-1484549)
chr8 (5-140)||(5853307-5853443)
chr8 (5-140)||(20403238-20403374)
chr8 (5-140)||(22001764-22001900)
chr8 (5-140)||(4542388-4542524)
chr8 (5-108)||(26225295-26225398)
chr8 (5-89)||(15203297-15203382)
chr8 (5-140)||(41598199-41598335)
chr8 (5-61)||(6520382-6520439)
chr8 (1-61)||(17140926-17140987)
chr8 (1-61)||(21491005-21491066)
chr8 (5-61)||(38855301-38855358)
chr8 (6-61)||(983456-983512)
chr8 (5-110)||(18678102-18678209)
chr8 (6-61)||(23760894-23760950)
chr8 (5-110)||(32121746-32121853)
chr8 (5-52)||(19896276-19896323)
chr8 (5-52)||(20046299-20046346)
chr8 (5-89)||(45290761-45290846)
chr8 (5-140)||(4483292-4483427)
chr8 (225-320)||(41598421-41598517)
chr8 (1-61)||(5866324-5866385)
chr8 (7-89)||(15070571-15070654)
chr8 (3-61)||(26355748-26355807)
chr8 (5-108)||(26223930-26224034)
chr8 (10-153)||(19801383-19801527)
chr8 (5-61)||(21285611-21285668)
chr8 (5-48)||(19937114-19937157)
chr8 (1-41)||(21249394-21249434)
chr8 (1-41)||(21255232-21255272)
chr8 (3-58)||(21673716-21673772)
chr8 (10-61)||(24353039-24353091)
chr8 (10-61)||(37116366-37116418)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-320)||(841-1160)
[»] chr4 (62 HSPs)
chr4 (1-320)||(14053091-14053412)
chr4 (1-320)||(12902767-12903089)
chr4 (1-320)||(7088887-7089209)
chr4 (1-316)||(44052839-44053157)
chr4 (1-320)||(22636445-22636766)
chr4 (1-320)||(23374148-23374470)
chr4 (1-228)||(17046497-17046724)
chr4 (1-320)||(16377310-16377632)
chr4 (1-314)||(16239764-16240080)
chr4 (117-320)||(3096772-3096975)
chr4 (1-320)||(7893713-7894033)
chr4 (1-320)||(14038658-14038981)
chr4 (1-172)||(7798784-7798958)
chr4 (1-198)||(16270147-16270346)
chr4 (127-320)||(17047861-17048055)
chr4 (1-110)||(52873367-52873478)
chr4 (77-165)||(15121747-15121834)
chr4 (1-160)||(6899901-6900062)
chr4 (1-67)||(3096303-3096369)
chr4 (5-140)||(18215289-18215425)
chr4 (5-140)||(44928894-44929031)
chr4 (5-108)||(54798756-54798861)
chr4 (212-308)||(6190686-6190782)
chr4 (5-140)||(12322-12458)
chr4 (5-108)||(14280327-14280431)
chr4 (5-140)||(15118367-15118503)
chr4 (5-140)||(23803280-23803416)
chr4 (5-140)||(44615299-44615435)
chr4 (5-140)||(52312521-52312657)
chr4 (40-109)||(43256161-43256230)
chr4 (185-320)||(15091093-15091229)
chr4 (3-61)||(12774019-12774078)
chr4 (5-89)||(15355391-15355476)
chr4 (5-89)||(19618238-19618323)
chr4 (5-89)||(44773153-44773238)
chr4 (5-89)||(51463934-51464019)
chr4 (5-140)||(1837524-1837660)
chr4 (5-140)||(3515018-3515154)
chr4 (6-107)||(12288211-12288316)
chr4 (5-140)||(18239434-18239570)
chr4 (5-140)||(19242710-19242846)
chr4 (5-140)||(50222354-50222490)
chr4 (259-320)||(7798968-7799029)
chr4 (1-61)||(15551827-15551888)
chr4 (234-320)||(44928711-44928798)
chr4 (5-140)||(12610961-12611090)
chr4 (6-61)||(52243246-52243302)
chr4 (5-52)||(7641286-7641333)
chr4 (3-61)||(8846368-8846427)
chr4 (8-108)||(8574871-8574971)
chr4 (10-140)||(22353852-22353984)
chr4 (5-61)||(39706338-39706395)
chr4 (5-89)||(14970773-14970858)
chr4 (5-89)||(44102225-44102310)
chr4 (6-55)||(43198611-43198661)
chr4 (10-108)||(13853-13953)
chr4 (9-89)||(15367708-15367789)
chr4 (9-89)||(15370036-15370117)
chr4 (9-89)||(15371220-15371301)
chr4 (9-89)||(15373501-15373582)
chr4 (9-89)||(15402721-15402802)
chr4 (9-87)||(16223550-16223629)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-320)||(13507-13827)
[»] scaffold0032 (1 HSPs)
scaffold0032 (10-320)||(51601-51911)
[»] chr5 (62 HSPs)
chr5 (1-320)||(21292759-21293080)
chr5 (1-320)||(8286631-8286954)
chr5 (1-320)||(23390285-23390607)
chr5 (1-320)||(22075029-22075351)
chr5 (1-320)||(25421542-25421865)
chr5 (1-320)||(13095505-13095827)
chr5 (1-320)||(24493579-24493901)
chr5 (1-319)||(13025321-13025642)
chr5 (1-320)||(9077962-9078285)
chr5 (1-320)||(24529230-24529553)
chr5 (11-320)||(25431414-25431727)
chr5 (1-320)||(1096477-1096800)
chr5 (1-142)||(21729032-21729175)
chr5 (1-142)||(21808357-21808500)
chr5 (127-320)||(21985935-21986130)
chr5 (126-320)||(22107162-22107357)
chr5 (5-204)||(22032333-22032529)
chr5 (91-204)||(18769910-18770022)
chr5 (1-89)||(21997555-21997645)
chr5 (91-165)||(23572180-23572254)
chr5 (40-163)||(18356364-18356488)
chr5 (5-110)||(18418594-18418699)
chr5 (40-109)||(20910800-20910869)
chr5 (5-108)||(22412198-22412302)
chr5 (1-108)||(37723913-37724020)
chr5 (5-140)||(264783-264919)
chr5 (5-140)||(10732955-10733091)
chr5 (6-89)||(20902075-20902159)
chr5 (5-140)||(29345991-29346127)
chr5 (5-140)||(39363395-39363531)
chr5 (3-61)||(22959582-22959641)
chr5 (5-89)||(39245147-39245232)
chr5 (10-107)||(20026942-20027043)
chr5 (5-140)||(20909023-20909159)
chr5 (5-140)||(29329945-29330081)
chr5 (5-140)||(29348464-29348600)
chr5 (5-140)||(29350937-29351073)
chr5 (5-140)||(32027404-32027540)
chr5 (5-140)||(42245380-42245516)
chr5 (1-61)||(19660885-19660946)
chr5 (5-61)||(21329547-21329604)
chr5 (5-89)||(2154680-2154765)
chr5 (5-52)||(11581303-11581350)
chr5 (5-89)||(18319100-18319185)
chr5 (5-52)||(20918052-20918099)
chr5 (3-61)||(21565554-21565613)
chr5 (225-320)||(36154616-36154712)
chr5 (5-140)||(36154798-36154931)
chr5 (5-89)||(10775742-10775827)
chr5 (5-89)||(31061079-31061164)
chr5 (5-89)||(38619445-38619530)
chr5 (5-61)||(21502206-21502263)
chr5 (5-46)||(23064522-23064563)
chr5 (7-60)||(26732884-26732937)
chr5 (1-61)||(36314587-36314648)
chr5 (5-110)||(17517201-17517308)
chr5 (10-108)||(22144068-22144168)
chr5 (6-61)||(26012085-26012141)
chr5 (9-59)||(26704089-26704139)
chr5 (10-60)||(26740697-26740747)
chr5 (9-59)||(26973822-26973872)
chr5 (155-203)||(22412340-22412388)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-320)||(10215-10534)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-320)||(15254-15574)
scaffold0114 (91-165)||(7391-7465)
[»] chr3 (80 HSPs)
chr3 (1-320)||(20698225-20698546)
chr3 (1-320)||(13442284-13442606)
chr3 (1-320)||(17487866-17488189)
chr3 (1-320)||(17499348-17499671)
chr3 (4-320)||(14576621-14576940)
chr3 (1-320)||(18438544-18438867)
chr3 (1-320)||(26686897-26687219)
chr3 (1-319)||(12399219-12399537)
chr3 (1-320)||(23083150-23083472)
chr3 (1-320)||(14972864-14973187)
chr3 (4-320)||(14572602-14572921)
chr3 (1-319)||(43840942-43841263)
chr3 (1-320)||(25476173-25476496)
chr3 (5-320)||(40213509-40213827)
chr3 (1-320)||(11424551-11424870)
chr3 (5-203)||(24153115-24153315)
chr3 (127-316)||(16796685-16796875)
chr3 (9-276)||(42386428-42386699)
chr3 (6-320)||(30029855-30030171)
chr3 (5-140)||(9707622-9707758)
chr3 (5-140)||(29172598-29172734)
chr3 (5-204)||(856150-856348)
chr3 (5-108)||(36166609-36166712)
chr3 (5-89)||(17672637-17672722)
chr3 (5-140)||(7781362-7781498)
chr3 (5-140)||(10247738-10247874)
chr3 (127-204)||(14179570-14179648)
chr3 (5-140)||(17463189-17463325)
chr3 (5-140)||(28848626-28848762)
chr3 (5-140)||(34159337-34159473)
chr3 (5-140)||(38961906-38962042)
chr3 (5-140)||(45606922-45607058)
chr3 (5-140)||(55476502-55476638)
chr3 (5-108)||(21618460-21618563)
chr3 (5-106)||(55500953-55501055)
chr3 (5-89)||(6469200-6469285)
chr3 (3-61)||(12174309-12174368)
chr3 (3-61)||(32307689-32307748)
chr3 (5-89)||(44494820-44494905)
chr3 (5-140)||(8899105-8899241)
chr3 (5-140)||(12567571-12567707)
chr3 (5-140)||(13544036-13544172)
chr3 (5-140)||(16454296-16454432)
chr3 (5-140)||(17446670-17446805)
chr3 (5-140)||(50242833-50242969)
chr3 (6-61)||(15470939-15470995)
chr3 (5-86)||(16282880-16282962)
chr3 (5-89)||(12119791-12119876)
chr3 (5-140)||(13151805-13151942)
chr3 (5-140)||(13154270-13154407)
chr3 (5-89)||(15412440-15412525)
chr3 (5-52)||(15977526-15977573)
chr3 (3-61)||(16103792-16103851)
chr3 (5-52)||(17737247-17737294)
chr3 (3-61)||(49668126-49668185)
chr3 (1-61)||(13210377-13210438)
chr3 (10-140)||(53070668-53070799)
chr3 (5-61)||(53301601-53301658)
chr3 (3-58)||(16097340-16097396)
chr3 (5-110)||(46822279-46822386)
chr3 (5-48)||(8499529-8499572)
chr3 (3-61)||(9512932-9512991)
chr3 (3-61)||(9520907-9520966)
chr3 (5-48)||(10556996-10557039)
chr3 (5-109)||(12511071-12511177)
chr3 (5-55)||(28194704-28194755)
chr3 (10-89)||(43550544-43550625)
chr3 (5-47)||(45577947-45577989)
chr3 (5-61)||(14234501-14234558)
chr3 (234-320)||(17248074-17248161)
chr3 (5-61)||(27165261-27165318)
chr3 (5-46)||(41123901-41123942)
chr3 (10-61)||(52523779-52523831)
chr3 (225-276)||(53070531-53070582)
chr3 (3-61)||(1644724-1644782)
chr3 (5-59)||(23077530-23077584)
chr3 (12-61)||(13919350-13919399)
chr3 (10-61)||(12377940-12377992)
chr3 (10-61)||(22110402-22110454)
chr3 (10-61)||(43925977-43926029)
[»] chr1 (50 HSPs)
chr1 (17-320)||(38801180-38801483)
chr1 (1-320)||(27250518-27250840)
chr1 (1-320)||(50210001-50210324)
chr1 (7-320)||(21026696-21027012)
chr1 (66-320)||(22354361-22354616)
chr1 (1-320)||(22532279-22532602)
chr1 (1-320)||(34509790-34510113)
chr1 (5-317)||(20135201-20135517)
chr1 (100-313)||(22355969-22356185)
chr1 (100-313)||(22357655-22357871)
chr1 (182-320)||(20847008-20847146)
chr1 (5-198)||(22468608-22468803)
chr1 (1-89)||(20847175-20847265)
chr1 (40-163)||(33797570-33797694)
chr1 (5-140)||(13988877-13989013)
chr1 (5-59)||(20454606-20454660)
chr1 (5-140)||(21923306-21923442)
chr1 (5-140)||(23593750-23593886)
chr1 (5-140)||(31612324-31612460)
chr1 (10-85)||(45574912-45574989)
chr1 (127-204)||(48603652-48603730)
chr1 (5-91)||(16275428-16275515)
chr1 (5-89)||(21840778-21840863)
chr1 (5-140)||(21475102-21475238)
chr1 (3-61)||(21754057-21754116)
chr1 (5-52)||(29298148-29298195)
chr1 (5-52)||(29776699-29776746)
chr1 (5-140)||(433023-433157)
chr1 (6-61)||(16758664-16758720)
chr1 (10-108)||(21896258-21896358)
chr1 (6-61)||(33681022-33681078)
chr1 (5-48)||(13212970-13213013)
chr1 (5-52)||(16361928-16361975)
chr1 (7-61)||(20918620-20918675)
chr1 (5-52)||(21707178-21707225)
chr1 (5-52)||(21711720-21711767)
chr1 (3-61)||(22921919-22921978)
chr1 (225-320)||(433244-433340)
chr1 (5-59)||(21714556-21714610)
chr1 (5-46)||(21342107-21342148)
chr1 (5-46)||(21346972-21347013)
chr1 (5-86)||(15860078-15860160)
chr1 (10-108)||(21861572-21861672)
chr1 (6-61)||(52928020-52928076)
chr1 (11-61)||(14295601-14295652)
chr1 (3-61)||(20248291-20248350)
chr1 (6-58)||(22237642-22237695)
chr1 (10-89)||(35261099-35261180)
chr1 (10-61)||(50614167-50614219)
chr1 (10-61)||(50621995-50622047)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-320)||(838-1159)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-320)||(167768-168089)
scaffold0011 (1-320)||(51923-52244)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-320)||(4722-5044)
scaffold0358 (65-320)||(12-268)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-320)||(4920-5239)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-320)||(13221-13543)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-320)||(47005-47318)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-320)||(1962-2284)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-320)||(3480-3802)
scaffold0292 (9-320)||(361-675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-320)||(1861-2183)
[»] scaffold0042 (1 HSPs)
scaffold0042 (9-320)||(24090-24406)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-320)||(38771-39093)
scaffold0145 (1-198)||(32952-33151)
scaffold0145 (5-89)||(9760-9845)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-320)||(5910-6235)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-320)||(4859-5180)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-320)||(25853-26176)
scaffold0122 (5-108)||(44709-44814)
scaffold0122 (141-319)||(33284-33463)
[»] scaffold0088 (1 HSPs)
scaffold0088 (9-320)||(20928-21243)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-320)||(39487-39809)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-320)||(75003-75325)
[»] scaffold0231 (1 HSPs)
scaffold0231 (5-320)||(22897-23215)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-320)||(17003-17328)
scaffold0056 (10-52)||(79388-79430)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-320)||(8489-8807)
[»] scaffold0309 (1 HSPs)
scaffold0309 (50-320)||(6669-6942)
[»] scaffold0021 (3 HSPs)
scaffold0021 (79-320)||(124675-124917)
scaffold0021 (1-108)||(174776-174883)
scaffold0021 (1-60)||(121776-121835)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-320)||(339739-340058)
scaffold0003 (40-163)||(71350-71474)
scaffold0003 (5-140)||(158465-158601)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-320)||(8321-8640)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-305)||(25906-26213)
scaffold0026 (1-320)||(39868-40189)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-320)||(39923-40245)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-273)||(2987-3261)
scaffold0540 (284-320)||(801-837)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-320)||(16388-16711)
[»] scaffold0175 (3 HSPs)
scaffold0175 (43-320)||(13144-13424)
scaffold0175 (1-66)||(34133-34199)
scaffold0175 (1-47)||(283-329)
[»] scaffold0228 (3 HSPs)
scaffold0228 (2-320)||(4519-4840)
scaffold0228 (2-320)||(12101-12422)
scaffold0228 (2-320)||(22053-22374)
[»] scaffold0120 (5 HSPs)
scaffold0120 (1-320)||(32747-33067)
scaffold0120 (1-320)||(45938-46258)
scaffold0120 (1-198)||(16123-16322)
scaffold0120 (1-52)||(17389-17440)
scaffold0120 (234-320)||(16333-16420)
[»] scaffold0235 (2 HSPs)
scaffold0235 (181-320)||(11302-11441)
scaffold0235 (1-106)||(11447-11554)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-192)||(3103-3297)
[»] scaffold0484 (1 HSPs)
scaffold0484 (127-320)||(1052-1246)
[»] scaffold0305 (1 HSPs)
scaffold0305 (182-320)||(20597-20735)
[»] scaffold0165 (2 HSPs)
scaffold0165 (155-320)||(3648-3813)
scaffold0165 (155-320)||(7712-7877)
[»] scaffold0130 (1 HSPs)
scaffold0130 (72-319)||(27913-28162)
[»] scaffold0046 (4 HSPs)
scaffold0046 (1-127)||(28424-28552)
scaffold0046 (1-61)||(11302-11363)
scaffold0046 (1-61)||(2007-2068)
scaffold0046 (1-44)||(4562-4605)
[»] scaffold0215 (1 HSPs)
scaffold0215 (5-204)||(26838-27036)
[»] scaffold0034 (2 HSPs)
scaffold0034 (125-320)||(51673-51868)
scaffold0034 (6-61)||(32551-32607)
[»] scaffold0029 (2 HSPs)
scaffold0029 (91-204)||(12859-12971)
scaffold0029 (5-140)||(11299-11435)
[»] scaffold0084 (1 HSPs)
scaffold0084 (155-312)||(10330-10488)
[»] scaffold1124 (1 HSPs)
scaffold1124 (91-204)||(1977-2089)
[»] scaffold0210 (2 HSPs)
scaffold0210 (91-204)||(21712-21824)
scaffold0210 (91-204)||(29604-29716)
[»] scaffold0352 (1 HSPs)
scaffold0352 (168-306)||(17790-17928)
[»] scaffold0107 (1 HSPs)
scaffold0107 (40-163)||(15362-15486)
[»] scaffold0070 (1 HSPs)
scaffold0070 (12-319)||(4545-4855)
[»] scaffold0023 (7 HSPs)
scaffold0023 (5-140)||(44465-44602)
scaffold0023 (5-140)||(17455-17591)
scaffold0023 (5-140)||(94422-94558)
scaffold0023 (3-61)||(100386-100445)
scaffold0023 (1-61)||(119885-119946)
scaffold0023 (3-61)||(40224-40283)
scaffold0023 (3-61)||(101511-101570)
[»] scaffold0716 (1 HSPs)
scaffold0716 (5-140)||(4705-4841)
[»] scaffold0444 (1 HSPs)
scaffold0444 (5-140)||(13403-13539)
[»] scaffold0254 (1 HSPs)
scaffold0254 (5-140)||(20758-20894)
[»] scaffold0134 (1 HSPs)
scaffold0134 (5-140)||(37832-37968)
[»] scaffold0028 (6 HSPs)
scaffold0028 (5-140)||(136691-136827)
scaffold0028 (5-140)||(139160-139296)
scaffold0028 (5-140)||(144098-144234)
scaffold0028 (5-140)||(134222-134358)
scaffold0028 (5-140)||(141629-141765)
scaffold0028 (17-61)||(62224-62269)
[»] scaffold0621 (2 HSPs)
scaffold0621 (6-136)||(8481-8613)
scaffold0621 (3-61)||(6547-6606)
[»] scaffold0454 (1 HSPs)
scaffold0454 (5-89)||(10784-10869)
[»] scaffold0102 (1 HSPs)
scaffold0102 (3-61)||(19276-19335)
[»] scaffold0001 (3 HSPs)
scaffold0001 (3-61)||(160696-160755)
scaffold0001 (5-140)||(501095-501231)
scaffold0001 (5-89)||(85646-85731)
[»] scaffold0761 (1 HSPs)
scaffold0761 (5-104)||(4308-4408)
[»] scaffold0230 (1 HSPs)
scaffold0230 (5-140)||(13958-14094)
[»] scaffold0037 (2 HSPs)
scaffold0037 (5-140)||(82083-82219)
scaffold0037 (6-61)||(22720-22776)
[»] scaffold2014 (1 HSPs)
scaffold2014 (10-108)||(1051-1151)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-57)||(4888-4944)
scaffold0395 (126-312)||(759-947)
[»] scaffold0261 (1 HSPs)
scaffold0261 (5-68)||(15675-15739)
[»] scaffold0149 (1 HSPs)
scaffold0149 (8-89)||(29946-30028)
[»] scaffold0022 (2 HSPs)
scaffold0022 (5-108)||(116441-116544)
scaffold0022 (10-61)||(129021-129072)
[»] scaffold0008 (1 HSPs)
scaffold0008 (3-62)||(14746-14806)
[»] scaffold0627 (1 HSPs)
scaffold0627 (254-320)||(170-237)
[»] scaffold0363 (1 HSPs)
scaffold0363 (5-52)||(9253-9300)
[»] scaffold0278 (1 HSPs)
scaffold0278 (3-61)||(5655-5714)
[»] scaffold0207 (1 HSPs)
scaffold0207 (3-61)||(2695-2754)
[»] scaffold0142 (1 HSPs)
scaffold0142 (5-52)||(16795-16842)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-89)||(40411-40496)
[»] scaffold0031 (2 HSPs)
scaffold0031 (10-140)||(20394-20524)
scaffold0031 (5-136)||(128765-128897)
[»] scaffold0010 (1 HSPs)
scaffold0010 (3-61)||(129917-129976)
[»] scaffold0327 (1 HSPs)
scaffold0327 (65-209)||(3429-3575)
[»] scaffold1765 (1 HSPs)
scaffold1765 (5-61)||(1096-1153)
[»] scaffold0333 (2 HSPs)
scaffold0333 (5-61)||(6625-6682)
scaffold0333 (5-61)||(14005-14062)
[»] scaffold0243 (1 HSPs)
scaffold0243 (5-61)||(6173-6230)
[»] scaffold0211 (1 HSPs)
scaffold0211 (3-61)||(28819-28879)
[»] scaffold0020 (2 HSPs)
scaffold0020 (5-61)||(15827-15884)
scaffold0020 (9-58)||(178912-178961)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-61)||(206575-206624)
[»] scaffold0839 (1 HSPs)
scaffold0839 (239-320)||(1865-1947)
[»] scaffold0555 (1 HSPs)
scaffold0555 (6-61)||(10591-10647)
[»] scaffold0100 (1 HSPs)
scaffold0100 (6-61)||(23933-23989)
[»] scaffold1439 (1 HSPs)
scaffold1439 (5-52)||(117-164)
[»] scaffold0819 (1 HSPs)
scaffold0819 (5-89)||(4225-4310)
[»] scaffold0628 (1 HSPs)
scaffold0628 (3-61)||(2856-2915)
[»] scaffold0556 (1 HSPs)
scaffold0556 (3-61)||(6824-6883)
[»] scaffold0494 (1 HSPs)
scaffold0494 (5-52)||(12353-12400)
[»] scaffold0218 (1 HSPs)
scaffold0218 (6-68)||(8117-8180)
[»] scaffold0125 (1 HSPs)
scaffold0125 (3-61)||(45842-45901)
[»] scaffold0503 (1 HSPs)
scaffold0503 (10-52)||(11982-12024)
[»] scaffold0198 (1 HSPs)
scaffold0198 (5-59)||(23853-23907)
[»] scaffold0530 (1 HSPs)
scaffold0530 (5-61)||(1084-1141)
[»] scaffold0461 (1 HSPs)
scaffold0461 (9-61)||(11482-11535)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-61)||(1119-1180)
[»] scaffold0124 (1 HSPs)
scaffold0124 (9-61)||(38306-38359)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-89)||(161156-161239)
[»] scaffold0476 (1 HSPs)
scaffold0476 (3-58)||(12778-12834)
[»] scaffold0413 (1 HSPs)
scaffold0413 (10-108)||(12587-12687)
[»] scaffold0123 (1 HSPs)
scaffold0123 (6-61)||(25121-25177)
[»] scaffold1984 (1 HSPs)
scaffold1984 (3-61)||(141-200)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-48)||(2237-2280)
[»] scaffold0138 (1 HSPs)
scaffold0138 (6-107)||(12954-13057)
[»] scaffold0101 (1 HSPs)
scaffold0101 (5-89)||(1347-1432)
[»] scaffold0297 (1 HSPs)
scaffold0297 (5-59)||(10575-10629)
[»] scaffold0131 (1 HSPs)
scaffold0131 (5-58)||(36464-36517)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-61)||(38752-38809)
[»] scaffold0357 (1 HSPs)
scaffold0357 (10-108)||(13147-13247)
[»] scaffold0078 (1 HSPs)
scaffold0078 (6-61)||(10542-10598)


Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 320
Target Start/End: Original strand, 22831524 - 22831834
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatctta 110  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||| |   |||  |  |||||||||| ||||||| ||||||||||||||||||||    
T  22831524 tagaccgactcatgcagcttagttaaataacaaacagcaacataggcactgttcaacgac-atgacataatcatatcaaattcaattcatcaacatctta 22831622  T
Q  111 --tgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctca 208  Q
      |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831623 gatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctca 22831722  T
Q  209 ttctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831723 ttctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 22831822  T
Q  309 ggcgagagcctc 320  Q
    ||||||||||||    
T  22831823 ggcgagagcctc 22831834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 320
Target Start/End: Complemental strand, 16920725 - 16920422
Alignment:
Q  17 cgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtat 115  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||| |||| ||  |||||||||  ||||||| ||| |||||||||||||||||||||    
T  16920725 cgactcatgcagcttagttaaataacaaacagcagcataggcagtatacaa-catcatgacataagtatatcaaattccattcatcaacatcttatgtat 16920627  T
Q  116 acaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaa 215  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||    
T  16920626 acaaatattcttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattcttaa 16920527  T
Q  216 gtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgaga 315  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  16920526 gtcttaattctacccaagggttcaactctcgagaaatcgtgcaacaaaggtcgcaaaatccaacaagtcactttgtttctgggtcactcgcaaggcgaga 16920427  T
Q  316 gcctc 320  Q
    |||||    
T  16920426 gcctc 16920422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 320
Target Start/End: Complemental strand, 20361070 - 20360749
Alignment:
Q  2 ttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||  ||| |||||||||||||||||||| |||||||    
T  20361070 ttcatcaacttagatcgactcatgcagcttagttaaataacaacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattca 20360971  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    |||||||||||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||||    
T  20360970 tcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattata 20360871  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||||||||  | |||||||||| |||||||| |||||||  ||| || | |||||| ||||||||||||||| | ||||||||||||||||||| ||    
T  20360870 attaacctcatcattaagtcttaatactacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctgtttctggg 20360771  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  20360770 tcactcgcgaggcgagagcctc 20360749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 20638394 - 20638073
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||| |||||  ||  |||||||||||||||||||| |||||     
T  20638394 cttcatcaacttagaccaactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattt 20638295  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    |||||||||||   ||| |||| ||||||||||||||||||||| | ||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  20638294 atcaacatctttaatattcaaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 20638195  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | ||||||||||  || || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |    
T  20638194 aattaacatcatcattaagtcttaatgttatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgg 20638095  T
Q  298 gtcactcgcgaggcgagagcct 319  Q
    ||||||||||||| ||||||||    
T  20638094 gtcactcgcgaggtgagagcct 20638073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 10 - 320
Target Start/End: Original strand, 11185524 - 11185834
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatct 108  Q
    |||||| |||||||| ||||||||||||||||||| || ||||||  |||||  |||| ||  |||||||||| ||||||| |||||||||||| |||||    
T  11185524 cttagaccgactcatgcagcttagttaaataacaaacaacaacatgtgcagtgtacaa-caacatgacataattatatcaaattcaattcatcagcatct 11185622  T
Q  109 tatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctca 208  Q
    | |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||    
T  11185623 tttgtatacaaacattcttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattacggttaacctca 11185722  T
Q  209 ttctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 308  Q
     | | |||||||||| |||||||||||| | |  |||||| |  | ||| ||||||||||||||||| ||||||||||| ||||||| |||||||| |||    
T  11185723 ctattaagtcttaatcctacccaagggtccgatcctcgacaacccatgcaacaaaggtcgcaaaatctaacaagtcactatgtttctgggtcactcacga 11185822  T
Q  309 ggcgagagcctc 320  Q
    |||||| |||||    
T  11185823 ggcgagggcctc 11185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 29060550 - 29060873
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||  |||||||||||||||||| | ||| ||    
T  29060550 cttcatcagcttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtc 29060649  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| | |||||||   ||  ||||||||||||| | ||||||||| | | |||||||||||| ||||| ||||||  ||||||||||||||||    
T  29060650 aacaacatctcaagtatacattcataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattat 29060749  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||  ||||  | |||||| ||| |||||| | |||||| ||||   | | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  29060750 aattaatatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 29060849  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  29060850 ggtcactcgcgaggcgagagcctc 29060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 25629466 - 25629143
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||| |||| | |||||| ||  |||||| ||||||||| |||||||| | ||| ||    
T  25629466 cttcatcaacttagaccgactcatgcagcttagttaaattacaacaggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtc 25629367  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  25629366 aacaacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 25629267  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | |||||  |||  | |||||| ||| |||||| | |||||||||||  || | |||||| ||||| |||||||||||| |||||| ||||||||||||     
T  25629266 aattaacaacatcattaagtctcaatactaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctg 25629167  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  25629166 ggtcactcgcgaggcgagagcctc 25629143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 22780338 - 22780017
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||  |||||||||| || |||||  |||  ||||||||||||||||||| ||| ||    
T  22780338 cttcatcaacttagactgactcatgcagcttagttaaataacaacaaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtc 22780239  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| ||||||||||||||   ||||||||| |||  ||||||||||| ||||| ||||||  ||||||||||||||||    
T  22780238 aacatcatcttaaatattcaattatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattat 22780139  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
      ||||| ||||  | ||||||| || |||||| | ||||||||||||| | | | |||| ||||||||| ||||| | |||| | |||||||||||| |    
T  22780138 gattaacatcatcattaagtctttatactaccccaaggttcaactctcggcaacttgtgcaacaaaggtcacaaaacctaacaggacactctgtttctag 22780039  T
Q  298 gtcactcgcgaggcgagagcct 319  Q
    || |||||||||||||||||||    
T  22780038 gttactcgcgaggcgagagcct 22780017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 18409938 - 18409615
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||| ||  |||||  |||||||||||||||||| | ||| ||    
T  18409938 cttcatcaacttagaccgactcatgcagctcagttaaataacaacagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtc 18409839  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |   || ||   ||  ||||| |||| |||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| |||||    
T  18409838 aacaacatctcaatcatccattcataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattat 18409739  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||||||| |  | |||||| |||||||||| ||||||| |||||| ||||||||||||     
T  18409738 aattaacatcatcattaagtctcaatactaccctaaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctg 18409639  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||| | ||||||||||||||    
T  18409638 ggtcactagagaggcgagagcctc 18409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 320
Target Start/End: Complemental strand, 17287903 - 17287585
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||  |||| |||||||||||||||||||| ||| ||| ||    
T  17287903 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaaca 17287804  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
     |||||||  ||| ||| ||| |||||||||||||| | ||||||||  ||   ||||||||||  ||||| ||||||  ||||||||||| ||||| ||    
T  17287803 tcatcttaaatattcaattatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataatt 17287704  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtca 301  Q
    ||| || |  | |||||| ||| |||||| | |||||||||||| || | |||||| |||||| | |||||  | |||||| |||||||||||| |||||    
T  17287703 aacatcctcattaagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaaccctaacaagacactctgtttctgggtca 17287604  T
Q  302 ctcgcgaggcgagagcctc 320  Q
    ||| |||| | ||||||||    
T  17287603 ctcacgagacaagagcctc 17287585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35245596 - 35245758
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| |||||||||||| |||||| || |||||||||||||| |||| ||  ||||||||||||||||||||||||||||    
T  35245596 cttcaacatcttagaccgactcatgcagcttagttaattaacaaacaccaacataggcagtatacaa-caacatgacataataatatcaatttcaattca 35245694  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatca 163  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  35245695 tcaacatcttatgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 20593783 - 20594106
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| ||| |||| ||||| |||||||||| |||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||    
T  20593783 cttcatcaacttagaccgaatcatgcagctcagttaaataaaaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtc 20593882  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  |||||||  ||   ||||||||||| || |||| |||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  20593883 aacaacatctcaattatacaatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 20593982  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||| | | ||  | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || ||||||||||| |||||| ||||||||||||     
T  20593983 aattatcattatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttcta 20594082  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  20594083 ggtcactcgcgaggcgagagcctc 20594106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 19303651 - 19303329
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||| |||| || |||||  |||||||||||||||||| | ||| |||    
T  19303651 cttcatcatcttagaccgactcatgcagcttagttaaataacaacaacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtca 19303552  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  ||||||||||| | | ||||||||| ||| |||||||||||| ||||| |||||   |||||||||||||||||    
T  19303551 acaacatctcaattatacattcatatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattata 19303452  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | || ||| | | |||||| | |||||||||||   | | | |||||||| || ||||||||||| |||||| |||||||||||| |    
T  19303451 attaacatcatcattaattctcagtgctaccccaaggttcaactcttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgg 19303352  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||||||||||||||    
T  19303351 gtcactctcgaggcgagagcctc 19303329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16496254 - 16496397
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  16496254 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattc 16496353  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa 142  Q
    | ||||||||||  ||| |||||| |  ||||||||||||||||    
T  16496354 aacaacatcttaaatattcaaataattctcaagtaatgcataaa 16496397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 18821716 - 18821608
Alignment:
Q  212 tcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggc 311  Q
    |||||||||||| |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  18821716 tcaagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggc 18821617  T
Q  312 gagagcctc 320  Q
    |||||||||    
T  18821616 gagagcctc 18821608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 20076710 - 20076857
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||   |    
T  20076710 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---a 20076806  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattata 149  Q
    |||||||||||   || ||| ||| ||||||||||||| || |||||||||    
T  20076807 tcaacatcttaaaaattcaattatacttcaagtaatgcgtataacattata 20076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 1541062 - 1540926
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||| ||  ||||||||||||||||||||||||| | ||| ||| ||    
T  1541062 atcaacttagatcgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagtatgacataataatatcaaatgcaagtcaaca 1540964  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  1540963 acgtctcaattattcacatataattcaagtaatgcata 1540926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 27416011 - 27415887
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgca 138  Q
    |||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||    
T  27416011 aacaacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgca 27415913  T
Q  139 t-aaacattataacacttcataatca 163  Q
    | |||||||||| ||| | |||||||    
T  27415912 taaaacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 25656640 - 25656725
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||  |||||| ||||||||||||||||||    
T  25656640 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacata-gcagtatacaaaaacagcatgacataataatatcaa 25656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 25688513 - 25688598
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||  |||||| ||||||||||||||||||    
T  25688513 atcaacttagatcgactcatgcagcttagttaaataacaacagcaacata-acagtatacaaaaacagcatgacataataatatcaa 25688598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 22782238 - 22782323
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| ||||||||||||||||||    
T  22782238 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 22782323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12742328 - 12742464
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  12742328 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 12742426  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  12742427 acgtctcaattattcacatataattcaagtaatgcata 12742464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 18334743 - 18334607
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  18334743 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 18334645  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  18334644 acgtctcaattattcacatataattcaagtaatgcata 18334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 19005057 - 19005193
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  19005057 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 19005155  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  19005156 acgtctcaattattcacatataattcaagtaatgcata 19005193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 19859070 - 19858934
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  19859070 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 19858972  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  19858971 acgtctcaattattcacatataattcaagtaatgcata 19858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 24422558 - 24422694
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  24422558 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 24422656  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  24422657 acgtctcaattattcacatataattcaagtaatgcata 24422694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 25754820 - 25754956
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | | |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  25754820 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 25754918  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  25754919 acgtctcaattattcacatataattcaagtaatgcata 25754956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 30676861 - 30676725
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||| ||||||||||||| | ||| ||| ||    
T  30676861 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaaca 30676763  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  30676762 acgtctcaattattcacatataattcaagtaatgcata 30676725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 33861805 - 33861941
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  33861805 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 33861903  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  33861904 acgtctcaattattcacatataattcaagtaatgcata 33861941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 33864289 - 33864425
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  33864289 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 33864387  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  33864388 acgtctcaattattcacatataattcaagtaatgcata 33864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 1595560 - 1595660
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||||  ||||| ||  |||||  |||||||||||||||||| | ||||||| ||    
T  1595560 atcaacttagactgactcatgcagcttagttaaataacaacagcaacata-acagtatacaaaaacaacatgacataataatatcaaatgcaattcaaca 1595658  T
Q  103 ac 104  Q
    ||    
T  1595659 ac 1595660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 2291331 - 2291195
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  2291331 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 2291233  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  2291232 acgtctcaattattcacatataattcaagtaatgcata 2291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 8055040 - 8055176
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  8055040 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-aaagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 8055138  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  8055139 acgtctcaattattcacatataattcaagtaatgcata 8055176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 26924791 - 26924655
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  26924791 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-atagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 26924693  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  26924692 acgtctcaattattcacatataattcaagtaatgcata 26924655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 34963384 - 34963520
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  34963384 atcaacttagaccgactcatgcaacttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 34963482  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  34963483 acgtctcaattattcacatataattcaagtaatgcata 34963520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 27333325 - 27333268
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  27333325 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 27333268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 27394065 - 27394008
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  27394065 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 27394008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 25644335 - 25644391
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagta 61  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  25644335 tcaacttagaccgactcatgcagcttagttaaataacagacagcaacataggcagta 25644391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 16448678 - 16448593
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| ||| | |||||| ||  |||||| ||||||||||||||||||    
T  16448678 atcaacttaaaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 16448593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 25714431 - 25714478
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  25714431 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 25714478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 18456735 - 18456866
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||  |||||| |||||||||||||||||| | ||| ||| |||| ||    
T  18456735 cttagaccgactcatgcagcttagttaaataacaacagcaacaca-atagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtc 18456833  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata 140  Q
    | |  ||| || ||||  |||||||||||||||    
T  18456834 tcaattattcacatataattcaagtaatgcata 18456866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 18461895 - 18462026
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||  |||||| |||||||||||||||||| | ||| ||| |||| ||    
T  18461895 cttagaccgactcatgcagcttagttaaataacaacagcaacaca-atagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtc 18461993  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata 140  Q
    | |  ||| || ||||  |||||||||||||||    
T  18461994 tcaattattcacatataattcaagtaatgcata 18462026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9098620 - 9098564
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||    
T  9098620 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacaaaggcagta 9098564  T

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Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 3852168 - 3852121
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  3852168 atcaacttagaccgactcatgcagcttagtttaataacaacagcaaca 3852121  T

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Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 19652207 - 19652266
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  19652207 tcatcaacttagaccgactcatgcagcttagttaaacaacaaacaacaacataggcagta 19652266  T

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Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20557043 - 20556996
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||    
T  20557043 atcaacttagaccaactcatgcagcttagttaaataacaacagcaaca 20556996  T

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Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 18821946 - 18821904
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  18821946 cttagaccgactcatgcagcttagttaaataacaacagcaaca 18821904  T

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Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 28496575 - 28496521
Alignment:
Q  8 aacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  28496575 aacttagaccgactcatgcagcttagttaaataacaattagcaacataggcagta 28496521  T

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Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 29808986 - 29808932
Alignment:
Q  8 aacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  29808986 aacttagaccgactcatgcagcttagttaaataacaattagcaacataggcagta 29808932  T

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Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 33443068 - 33443117
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    |||| |||||||| ||||||||||||  ||||||||||||||||||||||    
T  33443068 tagaccgactcatgcagcttagttaataaacaacagcaacataggcagta 33443117  T

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Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 19848102 - 19847995
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| |||| |||||||||  || |  ||||| |  |||||| |||||||||| ||||||| ||    
T  19848102 atcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaacacataaaaatatcaattgcaattcaaca 19848003  T
Q  103 acatctta 110  Q
    | ||||||    
T  19848002 atatctta 19847995  T

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Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 20109153 - 20109209
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  20109153 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 20109209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 4185930 - 4185871
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagta 61  Q
    |||||||||| || |||||||| |||| |||||||| |||| ||||||||||||||||||    
T  4185930 tcatcaacttggaccgactcatgcagcatagttaaacaacagacagcaacataggcagta 4185871  T

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Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 18456961 - 18457003
Alignment:
Q  234 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 276  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
T  18456961 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 18457003  T

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Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 19668386 - 19668436
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacatag 55  Q
    |||||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  19668386 tcaacttagaccgactcatgcagcttagttaattaacaaacagcaacatag 19668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 21766718 - 21766759
Alignment:
Q  18 gactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  21766718 gactcatgcaacttagttaaataacaatagcaacataggcag 21766759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 23992441 - 23992537
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattca 99  Q
    |||||||||||  ||||||| || ||||| |||||||||| |||| |||||||||  || |  ||||| | ||||||| |||||||||| |||||||    
T  23992441 atcaacttagactgactcatgcaacttagctaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattca 23992537  T

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Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 15041644 - 15041545
Alignment:
Q  18 gactcatacagcttagttaaataacaacagcaacataggcagtaaaca--aacagtatgacataataatatcaatttcaattcatcaacatcttatgtat 115  Q
    ||||||| || |||||||||||||||| || | |||||||||   |||  ||||| ||||||| |||||||||| | |||||||  ||||||||| ||||    
T  15041644 gactcatgcaacttagttaaataacaatagtagcataggcagatcacaacaacagcatgacattataatatcaaatgcaattcaataacatcttaagtat 15041545  T

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Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 20309118 - 20309437
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaac-agcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| |||||||||||||||||||  |||||||||||||||| |||| ||| |||||||||| ||||||| |||||||||    
T  20309118 cttcaacatcttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattca 20309216  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20309217 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatag 20309316  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||| ||||||| |||    
T  20309317 ttaacctcattcttaagtcttaatcctacccaagggttcaactctcgacaaatcgtgcaacaagggtcgcaaaatctaacaagtcactttgtttctgggt 20309416  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  20309417 cactcgcgaggcgagagcctc 20309437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 38225 - 37905
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||    
T  38225 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattca 38126  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||||     
T  38125 tcatcatcttatgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataa 38026  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| || ||||||||||| ||||||| |||    
T  38025 ttaacctcattgttaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaagtctaacaagtcactatgtttctgggt 37926  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    | |||||||||||||||||||    
T  37925 cgctcgcgaggcgagagcctc 37905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 23285875 - 23286193
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcat 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |    |||||||||||||||||| ||||||||    
T  23285875 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaca--gacataataatatcaattgcaattcat 23285972  T
Q  101 caacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||  ||| ||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||||     
T  23285973 caacatcttaaatattcaaatgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataa 23286072  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||| || |  | |||||||||| |||||||| |||||||||||| || | || ||| ||||||||||||||||| ||||||||||||||||||| |||    
T  23286073 ttaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctaggt 23286172  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  23286173 cactcgcgaggcgagagcctc 23286193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 23654497 - 23654188
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||| || ||||||||| | |||||  ||  |||||||||||||||||||| ||||||    
T  23654497 cttcaacaacttagaccgactcatgcagcttagttaaataacaacaacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattc 23654398  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| ||| ||||  |||||||||||||||| ||||||| ||| ||||||| |||||||||| ||||||  ||||||||||||||||    
T  23654397 atcaacatcttaaatattcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattat 23654298  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |    
T  23654297 aattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgg 23654198  T
Q  298 gtcactcgcg 307  Q
    ||||||||||    
T  23654197 gtcactcgcg 23654188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 5 - 320
Target Start/End: Complemental strand, 298922 - 298603
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||||  ||| |||||||||  ||||||||| ||||||| |    
T  298922 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaac 298823  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagt 200  Q
    |||||||||  ||| |||||| |  |||||||||||||||| ||||||| ||| ||||||| || ||||||| ||||||| |||||||||| ||||||||    
T  298822 aacatcttaaatattcaaataattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagt 298723  T
Q  201 taacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtc 300  Q
    ||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  298722 taacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtc 298623  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  298622 actcgcgaggcgagagcctc 298603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 5 - 320
Target Start/End: Complemental strand, 22738286 - 22737969
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||||||||||||||  || |||||||||  |||||  ||| |||||||||||||||||||| ||||||||||    
T  22738286 atcaacttagaccgactcatgcagcttagttaaataacaacattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatca 22738188  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    ||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||| ||    
T  22738187 acatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataatt 22738088  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtca 301  Q
    ||| || |  | |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |||||    
T  22738087 aacatcctcattaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctaggtca 22737988  T
Q  302 ctcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||    
T  22737987 ctcgcgaggcgagagcctc 22737969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 22731345 - 22731023
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||  |||||  ||| |||||||||||||||||||| ||||||    
T  22731345 cttcatcaagttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattc 22731246  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    |||||||| |||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  22731245 atcaacatattaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 22731146  T
Q  198 agttaacctcattctcaagtcttaattcta-cccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctc 296  Q
    | ||||| || |  | |||||||||| ||| ||| | ||||||| | || ||   |||||| |||||| |||||||| | |||||| ||||||||||||     
T  22731145 aattaacatcctcattaagtcttaatactacccccaaggttcaattatcaacagctcgtgcaacaaagatcgcaaaacctaacaaggcactctgtttctg 22731046  T
Q  297 ggtcactcgcgaggcgagagcct 319  Q
    ||| ||||| |||||||||||||    
T  22731045 ggtgactcgtgaggcgagagcct 22731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 23076452 - 23076774
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  23076452 cttcatccacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 23076551  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||| ||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| | ||||  ||||||||||||||||    
T  23076552 aacaatatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattat 23076651  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | || ||  ||| |||||| |  ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |    
T  23076652 aattaacatcatcataaaatcccaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctgg 23076751  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    || ||||||||||||||||||||    
T  23076752 gtaactcgcgaggcgagagcctc 23076774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22337125 - 22337448
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||| | |||  ||| |||||||||||||||||| | |||  |    
T  22337125 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagac 22337224  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||  || ||||||| |||||    
T  22337225 aacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattat 22337324  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||||||| |||| | | |||||||||||| || | |||||| ||||||||| ||||| || |||||| | ||||||||||     
T  22337325 aattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctg 22337424  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  22337425 ggtcactcgcgaggcgagagcctc 22337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 23660033 - 23660355
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| ||||||||  | |||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||| | ||| |||    
T  23660033 cttcatcaacttagaccgactcatgtatcttagttaaacaacaacagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatca 23660132  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| |||  ||   ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||| ||||||    
T  23660133 acaacatcttaaatattcaatcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattata 23660232  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||    |||||| ||| |||||| | |||||||||||| |  | |||||| | ||||||| ||||| || |||||| |||||||||||| |    
T  23660233 attaacatcatcaataagtctcaatactaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgg 23660332  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||||||||||||||    
T  23660333 gtcactcacgaggcgagagcctc 23660355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 23060523 - 23060815
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||  |||||||||||||||||||| ||| ||    
T  23060523 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtc 23060622  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  |||  || ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| |||||    
T  23060623 aacaacatcttaaatattaaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attat 23060721  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtt 292  Q
    | ||||| ||||  | |||||  ||| |||||| |  |||||| |||| || | |||||  ||||||||||||||| | |||||| |||||||||    
T  23060722 aattaacatcatcattaagtcccaatactaccccaaagttcaattctcaacaactcgtg-aacaaaggtcgcaaaacctaacaaggcactctgtt 23060815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 32451856 - 32451718
Alignment:
Q  182 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 281  Q
    |||||||||| ||| || ||||  ||||  |||||||||||| |||||| | |||||| |||||||| | |||||| ||||||||||||||||| |||||    
T  32451856 cagcttcacaaattgtaattaatatcatattcaagtcttaatgctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaa 32451757  T
Q  282 gtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32451756 gtcactctgtttctgggtcactcgcgaggcgagagcctc 32451718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 143 - 320
Target Start/End: Original strand, 27753730 - 27753907
Alignment:
Q  143 cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact 242  Q
    ||||||| ||| |||||||||||| ||||| ||||||  ||| |||||| |||||| ||||| ||||  | |||||||||| ||| || | | |||||||    
T  27753730 cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaact 27753829  T
Q  243 ctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| | |||||| || |||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||    
T  27753830 ctcgacaactcgtgcaacgaaggtcgcaaaatctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctc 27753907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23103506 - 23103399
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcat 100  Q
    ||||| || |||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||||| || ||||||| ||||||||||    
T  23103506 cttcaacatcttagaccgactcatgcagcttagttaaataaaaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcat 23103407  T
Q  101 caacatct 108  Q
    ||||||||    
T  23103406 caacatct 23103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 22105423 - 22105560
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagta--aacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||||||| | ||| ||| ||    
T  22105423 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaaca 22105522  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  22105523 acttctcaattattcacatataattcaagtaatgcata 22105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 40622244 - 40622114
Alignment:
Q  77 ataataatatcaatttcaattcatcaacatcttatgtataca-----aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaac 171  Q
    ||||| ||||||||| ||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||| || ||||||||||||  |||    
T  40622244 ataattatatcaatt-caattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  172 atatcttattcagcttcacagattatagttaac 204  Q
    || || ||  ||||||||||||||  |||||||    
T  40622145 atctcata-acagcttcacagattgcagttaac 40622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 21155211 - 21155075
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||||| ||| ||| ||    
T  21155211 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaattgcaagtcaaca 21155113  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  21155112 acgtctcaattattcacatataattcaagtaatgcata 21155075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8946667 - 8946733
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa 67  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||| |||||    
T  8946667 cttcatcaacttagaccgactcatgcagcttagttagataacaatagcaacataggcagtatacaaa 8946733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 18808954 - 18809090
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  18808954 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 18809052  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  18809053 acgtctcaattattcacatataattcaagtaatgcata 18809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 23130873 - 23131009
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23130873 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23130971  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23130972 acgtctcaattattcacatataattcaagtaatgcata 23131009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 23133340 - 23133476
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23133340 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23133438  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23133439 acgtctcaattattcacatataattcaagtaatgcata 23133476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 23135601 - 23135737
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23135601 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23135699  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23135700 acgtctcaattattcacatataattcaagtaatgcata 23135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23709683 - 23709547
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23709683 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23709585  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23709584 acgtctcaattattcacatataattcaagtaatgcata 23709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23712164 - 23712028
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23712164 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23712066  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23712065 acgtctcaattattcacatataattcaagtaatgcata 23712028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 24367785 - 24367921
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  24367785 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 24367883  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  24367884 acgtctcaattattcacatataattcaagtaatgcata 24367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 26505390 - 26505526
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  ||| || |||||||||||||||||| | ||| ||| ||    
T  26505390 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaaca 26505488  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  26505489 acgtctcaattattcacatataattcaagtaatgcata 26505526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 26507868 - 26508004
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  ||| || |||||||||||||||||| | ||| ||| ||    
T  26507868 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaaca 26507966  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  26507967 acgtctcaattattcacatataattcaagtaatgcata 26508004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 32215072 - 32214936
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  32215072 atcaacttagaccgactcatgcagcttagttaaataacaacaacaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 32214974  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  32214973 acgtctcaattattcacatataattcaagtaatgcata 32214936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 34402673 - 34402537
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  34402673 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 34402575  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  34402574 acgtctcaattattcacatataattcaagtaatgcata 34402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 39682324 - 39682460
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  39682324 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 39682422  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  39682423 acgtctcaattattcacatataattcaagtaatgcata 39682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23040300 - 23040247
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacata 54  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23040300 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 23040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 571408 - 571493
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  571408 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 571493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 6726006 - 6726091
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  6726006 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6726091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 320
Target Start/End: Complemental strand, 23708725 - 23708406
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| |||||||  |||||||||||||||||| | ||||||||||||||||  | |||||  |||| |||| |||||||||| ||| ||||| |    
T  23708725 tcaacttagaccgactcaagcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcga 23708626  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcataaac-attataacacttcataatcaacaacaacatatcttat-tcagcttcacagattatagtt 201  Q
    ||||| |   || |||||||  ||||||||||||||| || |||||| ||| | |||| ||||| |||   |||||||  ||||||||||||| ||  ||    
T  23708625 catctcaaacattcaaatataattcaagtaatgcatatacaattatatcacattataaacaacatcaattcatcttataacagcttcacagatcatcatt 23708526  T
Q  202 aacctcattctcaagtcttaatt-ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcgg 298  Q
    ||  ||||   ||| |||| ||| | |||| | ||||||||| || || | ||||||||||||| |||||||||||  |||||| || |||||  || ||    
T  23708525 aatatcataaacaa-tcttcattacgaccccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactggg 23708428  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    | |||||| |||||||||||||    
T  23708427 taactcgcaaggcgagagcctc 23708406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 24643101 - 24643054
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  24643101 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 24643054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 24898347 - 24898210
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  24898347 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 24898249  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  24898248 aacgtctcaattattcacatataattcaagtaatgcata 24898210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 24900830 - 24900693
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  24900830 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 24900732  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  24900731 aacgtctcaattattcacatataattcaagtaatgcata 24900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 24903307 - 24903170
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  24903307 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 24903209  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  24903208 aacgtctcaattattcacatataattcaagtaatgcata 24903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 24905784 - 24905647
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  24905784 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 24905686  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  24905685 aacgtctcaattattcacatataattcaagtaatgcata 24905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 24908259 - 24908122
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  24908259 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 24908161  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  24908160 aacgtctcaattattcacatataattcaagtaatgcata 24908122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 28405988 - 28406047
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||    
T  28405988 tcatcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagta 28406047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 43137310 - 43137357
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  43137310 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 43137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 22134315 - 22134257
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    |||||| | |||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  22134315 tcatcatcatagaccgactcatgcagcttagttaaatatcaacagcaacataggcagta 22134257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 28577110 - 28577156
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaac 51  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  28577110 atcaacttagaccgactcatgcagcttagttaaataacaacagcaac 28577156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 32039649 - 32039513
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| || ||||| |||||||||||||||||||||| |||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  32039649 atcaacttagaccggctcatgcagcttagttaaataacaacagtaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 32039551  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  32039550 acgtctcaattattcacatataattcaagtaatgcata 32039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 7679599 - 7679656
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||    
T  7679599 atcaacttagactgactcatgcagcttagttaaataacaaacagcaacataggcagta 7679656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 25616199 - 25616306
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || ||||||||||| |||| |||| |||||||||  || |  ||||| | ||||||| |||||||||| ||||||| ||    
T  25616199 atcaacttagactgactcatgcaacttagttaaattacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaaca 25616298  T
Q  103 acatctta 110  Q
    ||||||||    
T  25616299 acatctta 25616306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 45030005 - 45029863
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||| |  || || ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  45030005 atcaacttagaccgactcatgcagcttagttaaataacaacaacaacaca-acaatatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 45029907  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcataaacatt 146  Q
    || ||| |  ||| || ||||  ||||||||||||||| |||||    
T  45029906 acgtctcaattattcacatataattcaagtaatgcatatacatt 45029863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 24529680 - 24529595
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| |||| |||||||||||||||| ||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  24529680 atcaacttagaccgactcatgcagcatagttaaataacaacaacaacaca-tcagtatacaaaaacagcatgacataataatatcaa 24529595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 25175862 - 25175921
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||||||  || |||| ||||||||||||||||| |||||||||||||||||||    
T  25175862 tcatcaacttagacagattcatgcagcttagttaaataacaaacagcaacataggcagta 25175921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23072060 - 23071999
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||  |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  23072060 cttcaacaacttagtccgactcatgcagcttagttaaataacgaacaacaacataggcagta 23071999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 23287384 - 23287433
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    |||| |||||||| ||||||||||||  ||||||||||||||||||||||    
T  23287384 tagaccgactcatgcagcttagttaataaacaacagcaacataggcagta 23287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 38967385 - 38967426
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaaca 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  38967385 atcaacttagaccgactcatgcagcttagttaaataacaaca 38967426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 18787009 - 18786953
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  18787009 tcaacttagaccgactcatgcagcttagttaaataacaatcagtaacataggtagta 18786953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 26392403 - 26392451
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagt 60  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||||||    
T  26392403 tagaccgactcatgcagcttagttaataaacaacagcaacataggcagt 26392451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 19671848 - 19671901
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||  ||||||| |||||||||||| |||||| |||||||||||||||||    
T  19671848 acttagactgactcatgcagcttagttaattaacaatcagcaacataggcagta 19671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 23207296 - 23207348
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  23207296 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 23207348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 32077 - 32396
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcat 100  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  32077 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcat 32176  T
Q  101 caacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagt 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||| |    
T  32177 caacatcttaggtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataat 32276  T
Q  201 taacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtc 300  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||| | | | || ||||||||||||||||| || |||| ||||||||||| ||||    
T  32277 taacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactagagcaacaaaggtcgcaaaatcaaaaaagtaactctgtttctgggtc 32376  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  32377 actcgcgaggcgagagcctc 32396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 225; Significance: 1e-124; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 1299 - 1618
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| ||||||||||||||||  |||| ||  |||||||||| ||||||| |||||||||    
T  1299 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtgtacaa-catcatgacataattatatcaaattcaattca 1397  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1398 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatag 1497  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| |||    
T  1498 ttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggt 1597  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  1598 cactcgcgaggcgagagcctc 1618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 7276 - 7595
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || |||||||||||||| |||| ||  |||| ||||| ||||||| |||||||||    
T  7276 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaa-caacatgaaataattatatcaaattcaattca 7374  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7375 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatag 7474  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| |||    
T  7475 ttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggt 7574  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  7575 cactcgcgaggcgagagcctc 7595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 15345 - 15291
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    |||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  15345 atcaacgtagaccgactcatgcagcttagttaaataacaatagcaacataggcag 15291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 40443401 - 40443721
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||| | ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  40443401 cttcaacatcttagaccgactcgtgcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattca 40443500  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||||     
T  40443501 tcaacatcttaggtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataa 40443600  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| ||||||||||||||| |||||||| | |||||| |||||||||||||||||||| |||||||||||||||| |||    
T  40443601 ttaacctcattgttaagtcttaatcctacccaagggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttctgggt 40443700  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  40443701 cactcgcgaggcgagagcctc 40443721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 27847941 - 27847622
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| ||| |||| |||||||||||||||| || ||||||||||||||||  |||| |||||||||||||| ||||||| |||||||||    
T  27847941 cttcaacatcttagaccgattcatgcagcttagttaaataataaacagcaacataggcagtgtacaa-cagtatgacataattatatcaaattcaattca 27847843  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27847842 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagattatag 27847743  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    |||| |||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||| | |||    
T  27847742 ttaatctcattattaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttttgggt 27847643  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  27847642 cactcgcgaggcgagagcctc 27847622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 9509199 - 9509521
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||  |||| |||||||||||||||||||| ||||||    
T  9509199 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattc 9509298  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | |||| |||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  9509299 atcaacatcttaaatattcaaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 9509398  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| ||| || | ||||||||||||||| | || ||| ||||||||||||||||| |||||| |||||||||||| |    
T  9509399 aattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgg 9509498  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  9509499 gtcactcgcgaggcgagagcctc 9509521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 7 - 320
Target Start/End: Original strand, 10589055 - 10589370
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaac 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||  ||  |||||||||| ||||||||| ||||||| ||||    
T  10589055 caacttagatcgactcatgcagcttagttaaataacaacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaac 10589154  T
Q  105 atcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaac 204  Q
    |||||   | | ||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||| ||||||   |||||||||||||||| |||||    
T  10589155 atcttcaatgttcaaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaac 10589254  T
Q  205 ctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactc 304  Q
    |||||  | |||||||||| |||||||| ||| ||||||| ||| | |||||| | ||||||||||||||| ||||||||||||||||||| ||||||||    
T  10589255 ctcatcattaagtcttaatcctacccaaaggtccaactctagacaactcgtgcaaaaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactc 10589354  T
Q  305 gcgaggcgagagcctc 320  Q
    ||||||||||||||||    
T  10589355 gcgaggcgagagcctc 10589370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 12698841 - 12699164
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa---acagtatgacataataatatcaatttcaatt 97  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||   |||| |||||||||||||||||||| |||||    
T  12698841 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaatt 12698940  T
Q  98 catcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 196  Q
    |||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12698941 catcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12699040  T
Q  197 tagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctc 296  Q
    || ||||| || |  | || ||||||| |||||| | ||||||||| ||||| | |||||| ||||||||||||||| | ||||||||||| |||||||     
T  12699041 taattaacatcctcattaactcttaatactaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactttgtttctg 12699140  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    |||||||| ||||| |||||||||    
T  12699141 ggtcactcacgaggtgagagcctc 12699164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 26212006 - 26212328
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  26212006 cttcaacaacttagaccgactcatacaacttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattc 26212105  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||||| |  |||||||||||||||| ||||||| ||| | |||||||||||||||| ||||||  ||||||||||||||||    
T  26212106 aacaacatcttaaatattcaaataattctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattat 26212205  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctg-tttctc 296  Q
    | |||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||| | ||||| |||||||| |||||     
T  26212206 aattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaaatcactctgttttctg 26212304  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  26212305 ggtcactcgcgaggcgagagcctc 26212328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 16386359 - 16386038
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaatt 97  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||| || | |||||||||||| |||||  ||| |||||||||  |||||||||  | ||    
T  16386359 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtattt 16386260  T
Q  98 catcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 196  Q
    |||||||||||||  ||| |||| | |  |||||||||||||||| |||||||  || |||||||||||||||||| ||||||  |||||||||||||||    
T  16386259 catcaacatcttaaatattcaaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagatta 16386160  T
Q  197 tagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctc 296  Q
    ||||||||||| |  | ||||||||||  ||||||| ||||||||||| ||| | || ||| ||||||||||||||||| |||||||||||||||||||     
T  16386159 tagttaacctcttcattaagtcttaatgttacccaaaggttcaactctggacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctg 16386060  T
Q  297 ggtcactcgcgaggcgagagcc 318  Q
    ||||||||||||||||||||||    
T  16386059 ggtcactcgcgaggcgagagcc 16386038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 38227491 - 38227813
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||| || |||||| |||||||||||||||||| | ||| |||    
T  38227491 cttcatctacttagaccgactcatgcagcttagttaaataacaatagcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtca 38227590  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||| ||||| | | | ||||||| ||| || ||||||||| ||||||||||||   | ||||||| ||||||    
T  38227591 acaacatcttaaatattcaattatacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattata 38227690  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||||||| |||||| | |||||||||||  || | |||||| ||||||||||||||| || |||||| |||||||||| | |    
T  38227691 attaacatcatcattaagtcttaatactaccccaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgg 38227790  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  38227791 gtcactcgcgaggcgagagcctc 38227813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 3564475 - 3564155
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||  |||||||||||||||||| |  || ||    
T  3564475 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtc 3564376  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||  |||||||||||| || ||||||| | ||| |||||||||||| ||||| ||||||  || ||||| || ||||    
T  3564375 aacaacatctcaattatacattcataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttat 3564276  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||| ||||||  || | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  3564275 aattaacatcatcattaagtctcaatactaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 3564176  T
Q  297 ggtcactcgcgaggcgagagc 317  Q
    |||||||||||||||||||||    
T  3564175 ggtcactcgcgaggcgagagc 3564155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 18456519 - 18456319
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||| || |||||  |||||||||||||||||| | ||| ||| |||    
T  18456519 atcaacttagaccgactcatgcagcttagttaaataacgatagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaa 18456420  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtta 202  Q
    |||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||| |||    
T  18456419 catcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataatta 18456320  T
Q  203 a 203  Q
    |    
T  18456319 a 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 12187115 - 12187227
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||||| ||||||||||    
T  12187115 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttcac 12187213  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  12187214 agattgcagttaac 12187227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 17138081 - 17137969
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||||    
T  17138081 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttcac 17137983  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  17137982 agattgcagttaac 17137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 320
Target Start/End: Complemental strand, 15144143 - 15143825
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||   |||||  |||  |||| | || || |||||||||| | |||  || |||    
T  15144143 tcaacttagaccgactcatgcagcttagttaaataacaacagcaacatct-cagtatgcaataacagcaagatatcataatatcaaatgcaagccaacaa 15144045  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttatt-cagcttcacagattatagtt 201  Q
    ||||| | |||||||   ||  || ||||||||| || ||||| ||| ||| ||||||||||   ||| | ||||||   |||||| |||||||||| |     
T  15144044 catctcaagtatacattcataatttaagtaatgcgtataacatcatatcacatcataatcaatgtcaaaacatcttaaaacagcttgacagattatatta 15143945  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | |||||||| | ||||||   |||||||||||   | | |||||| |||||||||||||||||| |||||| |||||||||||| ||||    
T  15143944 aacatcatcattaagtcttagtactaccccgaggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctaggtc 15143845  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  15143844 actcgcgaggcgagagcctc 15143825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 48273403 - 48273508
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  48273403 atcaacttagaccgacttatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 48273502  T
Q  103 acatct 108  Q
    ||||||    
T  48273503 acatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 13647344 - 13647476
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagta--aacaaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||||||| | ||| ||| |||| ||    
T  13647344 cttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtc 13647443  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata 140  Q
    | |  ||| || ||||  |||||||||||||||    
T  13647444 tcaattattcacatataattcaagtaatgcata 13647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 16213695 - 16213831
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  16213695 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatccaagtcaaca 16213793  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || |||||  ||| || ||||  |||||||||||||||    
T  16213794 acgtcttaattattcacatataattcaagtaatgcata 16213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 24275182 - 24275318
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  24275182 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 24275280  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  24275281 acgtctcaattattcacatataattcaagtaatgcata 24275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 456332 - 456468
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  456332 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 456430  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  456431 acgtctcaattattcacatataattcaagtaatgcata 456468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 11393438 - 11393302
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  11393438 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 11393340  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  11393339 acgtctcaattattcacatataattcaagtaatgcata 11393302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 11972507 - 11972643
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  11972507 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 11972605  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  11972606 acgtctcaattattcacatataattcaagtaatgcata 11972643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 14949273 - 14949137
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  14949273 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 14949175  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  14949174 acgtctcaattattcacatataattcaagtaatgcata 14949137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 15376864 - 15376728
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  15376864 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 15376766  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  15376765 acgtctcaattattcacatataattcaagtaatgcata 15376728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 16232531 - 16232667
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  16232531 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 16232629  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  16232630 acgtctcaattattcacatataattcaagtaatgcata 16232667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 18640283 - 18640419
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  18640283 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 18640381  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  18640382 acgtctcaattattcacatataattcaagtaatgcata 18640419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 20385274 - 20385138
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  20385274 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 20385176  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  20385175 acgtctcaattattcacatataattcaagtaatgcata 20385138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 21189746 - 21189610
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  21189746 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 21189648  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  21189647 acgtctcaattattcacatataattcaagtaatgcata 21189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 32125502 - 32125638
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  32125502 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 32125600  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  32125601 acgtctcaattattcacatataattcaagtaatgcata 32125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 41522928 - 41523064
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  41522928 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 41523026  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  41523027 acgtctcaattattcacatataattcaagtaatgcata 41523064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 41525390 - 41525526
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  41525390 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 41525488  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  41525489 acgtctcaattattcacatataattcaagtaatgcata 41525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 2530208 - 2530139
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatctt 109  Q
    |||||||||||||||||||  | |||||||  |||||||||||||||||||||||||||| |||||||||    
T  2530208 aacaacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16410070 - 16410155
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  16410070 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 16410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 18430723 - 18430859
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  |||  || | |||||  |||||||||||||||||| | ||| ||| ||    
T  18430723 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatataaaaacatcatgacataataatatcaaatgcaagtcaaca 18430821  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    |||||| |  ||| || ||||  |||||||||||||||    
T  18430822 acatctcaattattcacatataattcaagtaatgcata 18430859  T

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Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 24702249 - 24702385
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  24702249 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 24702347  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  24702348 acgtctcaattattcacatataattcaagtaatgcata 24702385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 27216871 - 27217007
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  27216871 atcaacttagaccaactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 27216969  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  27216970 acgtctcaattattcacatataattcaagtaatgcata 27217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 67759 - 67816
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  67759 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 67816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28505409 - 28505348
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  28505409 cttcatcatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 28505348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34200796 - 34200857
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  34200796 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 34200857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 811240 - 811181
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||    
T  811240 tcatcaacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagta 811181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 3386344 - 3386391
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  3386344 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 3386391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 13869357 - 13869442
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| | | |||| ||  |||||| ||||||||||||||||||    
T  13869357 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 13869442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 18005658 - 18005717
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  18005658 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataagcagta 18005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 24704699 - 24704746
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  24704699 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 24704746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 44014190 - 44014249
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  44014190 tcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 44014249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 44116520 - 44116605
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||| | |||||| ||  |||||  ||||||||||||||||||    
T  44116520 atcaacttagaccgactcatgcagcttggttaaataacaacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaa 44116605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 17061844 - 17061748
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | ||||||||||||||||||||||||    
T  17061844 ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctc 17061748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 2280225 - 2280121
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| |||||||| ||||||||||||  ||| |||| ||||||||||||||  | |||||| |||| ||||||||||||| | ||| ||| |||    
T  2280225 tcaacttagaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaa 2280126  T
Q  104 catct 108  Q
    |||||    
T  2280125 catct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 20110567 - 20110610
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  20110567 atcaacttagaccgactcatgcagcttagttaaataacaacagc 20110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 16219823 - 16219717
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| ||||||||  |||||||||||||||| |||| ||||||||||||||  |||| ||  |||| |||| |||||| | | ||| |||||||    
T  16219823 tcaacttagaccgactcatgtagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaa 16219724  T
Q  104 catctta 110  Q
    |||||||    
T  16219723 catctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17062066 - 17061981
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaac-aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| |  |||||| || ||| || ||||||||||||||||||    
T  17062066 atcaacttagaccgactcatgcagcttagttaaataacaatcagcaac-tcagcagtatacaaaatagcatgacataataatatcaa 17061981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 18154944 - 18154894
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  18154944 acttagaccgactcatgcagcttggttaaataacaatagcaacataggcag 18154894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16495412 - 16495473
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| || |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  16495412 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 16495473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 47831821 - 47831878
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||||    
T  47831821 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacatagacagta 47831878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 12756600 - 12756549
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 276  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||    
T  12756600 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 12756549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 13831384 - 13831431
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  13831384 atcaatttagaccgactcatgcagcttagttaaataacaacaacaaca 13831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 16056343 - 16056446
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaac 104  Q
    |||||||||| ||||| || || |||||||||||||| ||||||||||||| || ||  ||||||  |||| |||| |||||||| | ||| ||| ||||    
T  16056343 tcaacttagaccgactgatgcaccttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaac 16056442  T
Q  105 atct 108  Q
    ||||    
T  16056443 atct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 18203831 - 18203882
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    ||||||||||||||| ||||||||||||  ||||||| |||||||| |||||    
T  18203831 cttagatcgactcatgcagcttagttaataaacaacaacaacatagacagta 18203882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 38898528 - 38898443
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaa 89  Q
    ||||||||| | |||||||| ||||||||||||||||||||| | ||| | ||||  || | |||||| ||||||||||||||||||    
T  38898528 atcaacttaaaccgactcatgcagcttagttaaataacaacaacgacaca-gcagtatataaaaacagcatgacataataatatcaa 38898443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 1868101 - 1868045
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| |||| ||||||||||||||    
T  1868101 tcaacttagaccgactcatgcagcttagttaataaactaacaacaacataggcagta 1868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 14044761 - 14044817
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| || ||||||||||||||||    
T  14044761 tcaacttagaccgactcatgcagcttagttaataaacaaaaagcaacataggcagta 14044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 14354791 - 14354847
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| || ||||||||||||||||    
T  14354791 tcaacttagaccgactcatgcagcttagttaataaacaaaaagcaacataggcagta 14354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 20220290 - 20220238
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||||||||||||||||  ||| |||| ||||||||||||||    
T  20220290 cttagaccgactcatacagcttagttaataaacaaacaacaacataggcagta 20220238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 16292 - 16611
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| |||||||||||||||| || ||||||||||||||||| |||| ||| |||||||||| ||||||| |||||||||    
T  16292 cttcaacatcttagaccgactcatgcagcttagttaaataagaaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattca 16390  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16391 tcaacatattatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatag 16490  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| ||||||||| |||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||| |||    
T  16491 ttaacctcattattaagtcttaatcctacccaagcgttcaactctcgagaaatcgtgcaacaaaggtcacaaaatccaacaagtcactctgtttctaggt 16590  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  16591 cactcgcgaggcgagagcctc 16611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 45131107 - 45130793
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaa-ttca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  45131107 cttcaacatcttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattca 45131008  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||| |||||||||||||||||     
T  45131007 tcaacatcttaggtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataa 45130908  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||| || |||||||||||||||| |||    
T  45130907 ttaacctcattattaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaaatctaataagtcactctgtttctgggt 45130808  T
Q  300 cactcgcgaggcgag 314  Q
    |||||||||||||||    
T  45130807 cactcgcgaggcgag 45130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 16199755 - 16199438
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| ||||||||||| |||||  ||||||  ||||||||||||||||||||||||||||    
T  16199755 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattca 16199656  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||     
T  16199655 tctacatcttaggtatacaaatattcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagattataa 16199556  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||| | |||    
T  16199555 ttaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttttgggt 16199456  T
Q  300 cactcgcgaggcgagagc 317  Q
    ||||||||||||||||||    
T  16199455 cactcgcgaggcgagagc 16199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 31971267 - 31971587
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||| |||||||    
T  31971267 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattca 31971366  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||     
T  31971367 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataa 31971466  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| |||||||| |||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||| ||||| |||    
T  31971467 ttaacctcattgttaagtcttaatcctacccaaaggttcagctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttctgggt 31971566  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    | ||||||||| || ||||||    
T  31971567 cgctcgcgaggtgacagcctc 31971587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 21919111 - 21918789
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  21919111 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 21919012  T
Q  99 atcaacatcttatgtatacaaata-ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||||| ||||||||||||||||||||||||||| ||| ||||||||| || ||||| ||||||  |||||||||||||  |    
T  21919011 aacaacatcttaaatattcaaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgt 21918912  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||||||||  | ||||||||||  ||||||||||||||||||||||| | || ||| ||||||||||||||||| ||||||||||||||||||| |    
T  21918911 aattaacctcatcgttaagtcttaatcttacccaagggttcaactctcgacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctag 21918812  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  21918811 gtcactcgcgaggcgagagcctc 21918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 20536218 - 20536540
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  20536218 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 20536317  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||| ||| ||||| ||||||  || |||||||||||||    
T  20536318 atcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattat 20536417  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| |||||| | |||||||| |||||| | |||||| ||||||||||||||| | || |||||||||||||||| |    
T  20536418 aattaacatcctcattaagtcttaatactaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaaacctaataagtcactctgtttctgg 20536517  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  20536518 gtcactcgcgaggcgagagcctc 20536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 18879342 - 18879026
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcat 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |  |   |||||||||||||||| ||||||||    
T  18879342 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaa---cataataatatcaattgcaattcat 18879246  T
Q  101 caacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||  ||| |||||||||||||||||||||  | ||||||||| ||| |||||||||||| || || ||||||| ||||||||||||||||||    
T  18879245 caacatcttaaatattcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttat-cagcttcacagattatag 18879147  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||| ||||  | ||||||| || ||| || | ||||||||||||||| | |||||| ||||||| ||||||||| |||||| |||||||||||| |||    
T  18879146 ttaacatcatcattaagtcttgatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaaatctaacaaggcactctgtttctgggt 18879047  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  18879046 cactcgcgaggcgagagcctc 18879026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 18818520 - 18818198
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||  || ||    
T  18818520 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtc 18818421  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  ||||||||||||||||    
T  18818420 aacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattat 18818321  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| |||||| |   |||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |    
T  18818320 aattaacatcctcattaagtcttaatactaccctaaatttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgg 18818221  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  18818220 gtcactcgcgaggcgagagcctc 18818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21389561 - 21389353
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || ||||||||| |||| |||| ||| |||||||||| ||||||| |||||||||    
T  21389561 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagtatacaa-cagcatgacataattatatcaaattcaattca 21389463  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |     
T  21389462 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaa 21389363  T
Q  200 ttaacctcat 209  Q
    ||||| ||||    
T  21389362 ttaacttcat 21389353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21396091 - 21395896
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || |||||||||||||| |||| ||| |||| ||||| ||||||| |||||||||    
T  21396091 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaa-cagcatgagataattatatcaaattcaattca 21395993  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21395992 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagatta 21395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21790584 - 21790389
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || |||||||||||||| |||| ||| |||| ||||| ||||||| |||||||||    
T  21790584 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatacaa-cagcatgagataattatatcaaattcaattca 21790486  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21790485 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagatta 21790389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21778887 - 21778697
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || ||||||||| |||| |||| ||| |||||||||| ||||||| |||||||||    
T  21778887 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagtatacaa-cagcatgacataattatatcaaattcaattca 21778789  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 191  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21778788 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 21924039 - 21923717
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  |||||  ||  ||||||| |||||||||||| ||| ||    
T  21924039 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtc 21923940  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| ||| ||| |||||||||||||| | ||| ||||    | |||||||||||||||||| ||||||  ||||||||||||||||    
T  21923939 aacaacatcttaaatattcaattatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattat 21923840  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | |||||||||| |||||  | |||||||||||| || | ||| || ||||||||||||||| | |||||| |||||||||||| |    
T  21923839 aattaacatcatcattaagtcttaatactacctcaaggttcaactctcaactactcgggcaacaaaggtcgcaaaacctaacaaggcactctgtttctgg 21923740  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  21923739 gtcactcgcgaggcgagagcctc 21923717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22626746 - 22627068
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||| | ||| |||    
T  22626746 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatca 22626845  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| ||||||||||||  || ||||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||||||    
T  22626846 acaacatcttaaatattcaattatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattata 22626945  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| || |  | |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |    
T  22626946 attaacatcctcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctag 22627045  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
     ||||||||||||||||||||||    
T  22627046 atcactcgcgaggcgagagcctc 22627068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 28649155 - 28648832
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||||||||||| | ||| ||    
T  28649155 cttcatcaacttagaccgactcatgcagcttagttaaataacaaaagcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtc 28649056  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||||||   ||  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| |||||    
T  28649055 aacaacatcttaattatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattat 28648956  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  28648955 aattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 28648856  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    |||||  ||| |||||||||||||    
T  28648855 ggtcatgcgcaaggcgagagcctc 28648832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 7372788 - 7373088
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  7372788 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 7372887  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    | || |||||||  ||| ||| ||| |||||||||||||       ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||||    
T  7372888 aacatcatcttaaatattcaattatacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattata 7372980  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||| || |  | |||||| | | | |||| |  ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||    
T  7372981 attaacatcctcattaagtctcactaccaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctggg 7373080  T
Q  299 tcactcgc 306  Q
    ||||||||    
T  7373081 tcactcgc 7373088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 320
Target Start/End: Original strand, 23648567 - 23648886
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || ||||||||| |||||| ||||||||||||||   ||||  |||  ||||||||||||||||| || |||| || ||    
T  23648567 atcaacttagactgactcatgcaacttagttaattaacaatagcaacataggcagattacaacaacaacatgacataataatatcatttgcaatacaaca 23648666  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    ||||||||  ||| |||  |  |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||| |||||||||| ||    
T  23648667 acatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataatt 23648766  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | | |||||||| |||||| | |||||||||||| || | |||||| |||||||||||| ||| | ||||||||||||||||||| |||     
T  23648767 aacatcatcattaggtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaacaagtcactctgtttctgggtt 23648866  T
Q  301 actcgcgaggcgagagcctc 320  Q
    |||| |||||||||||||||    
T  23648867 actcacgaggcgagagcctc 23648886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 23406389 - 23406713
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||  |||||||||||||||||||| ||| ||    
T  23406389 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtc 23406488  T
Q  99 atc--aacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 195  Q
    | |  | |||||||  ||| ||| ||| |||||||||||||| | ||||||||| |||  |||| |||||| ||||| ||||||  || ||||||| |||    
T  23406489 aacatatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatatt 23406588  T
Q  196 atagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttct 295  Q
    ||| ||||| || |  | |||||  |||  || || |  ||||||||||| |  | |||||| ||||||||| ||||| | |||||| ||||||||||||    
T  23406589 ataattaacatcctcattaagtcccaatattatcccaaagttcaactctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttct 23406688  T
Q  296 cggtcactcgcgaggcgagagcctc 320  Q
     ||||||||||||||||||||||||    
T  23406689 gggtcactcgcgaggcgagagcctc 23406713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 6759268 - 6759589
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||  ||  |||||||||||||||||| | ||| ||    
T  6759268 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaagtc 6759367  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttatt-cagcttcacagatta 196  Q
    |   |||||| |  ||||||   ||  ||||| |||||| || ||||||||| ||| |||||||||||| ||||| ||||||   |||||||||||||||    
T  6759368 a---acatctcaattatacactcataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 6759464  T
Q  197 tagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttct 295  Q
    || ||||| ||||  | |||||| ||| |||||| | |||||||||||   | | | |||||||| || | ||||||||| |||||| ||||||||||||    
T  6759465 taattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagattgcaaaatcctaacaagacactctgtttct 6759564  T
Q  296 cggtcactcgcgaggcgagagcctc 320  Q
     ||||||||||||||||||||||||    
T  6759565 gggtcactcgcgaggcgagagcctc 6759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 16092453 - 16092129
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||| | ||| ||    
T  16092453 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtc 16092354  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 196  Q
    | |||||||| |  ||||||   ||  || ||||||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  || |||| || ||||    
T  16092353 aacaacatctcaaatatacattcataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatatta 16092254  T
Q  197 tagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttct 295  Q
    || ||||| |||| || |||||| |||  ||||| | |||||||||||  || | | ||| |||| || ||||||||||| |||| | ||||||||||||    
T  16092253 taattaacatcatccttaagtctcaatattaccccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttct 16092154  T
Q  296 cggtcactcgcgaggcgagagcctc 320  Q
     ||||||||| ||||||||||||||    
T  16092153 gggtcactcgggaggcgagagcctc 16092129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22875075 - 22875398
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||| ||||| |||||||| ||||||||||||||| || |||||||| |||||||| || |||||  |||||||||||||||||| | ||| |||    
T  22875075 cttcatcaatttagaccgactcatgcagcttagttaaatagcagcagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtca 22875174  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagattat 197  Q
     |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  ||||||||||||||||    
T  22875175 acaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattat 22875274  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| |||   | |  ||| ||| |||||| | |||||||||||  || | | |||||||| || |||||||  || |||||||||||||||||||     
T  22875275 aattaacatcaccattacatctcaatactaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaaagccctaacaagtcactctgtttctg 22875374  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  22875375 ggtcactcgcgaggcgagagcctc 22875398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 25363123 - 25362929
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 225  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac 25363024  T
Q  226 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||||||||||| || | |||||| | |||||||||||| ||  ||||| |||||||||||  |||||||| |||||||||||||||    
T  25363023 tacccaaaggttcaactctcaacaactcgtgcaagaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactctcgaggcgagagcctc 25362929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 14409595 - 14409459
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  14409595 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 14409497  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  14409496 acgtctcaattattcacatataattcaagtaatgcata 14409459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 16413467 - 16413331
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  16413467 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 16413369  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  16413368 acgtctcaattattcacatataattcaagtaatgcata 16413331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 26219728 - 26219831
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| | |||||| || ||| ||||||||||||||||||||| | ||| ||| |||    
T  26219728 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaatagtatgacataataatatcaaatgcaagtcaacaa 26219826  T
Q  104 catct 108  Q
    |||||    
T  26219827 catct 26219831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 1484413 - 1484549
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  1484413 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 1484511  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  1484512 acgtctcaattattcacatataattcaagtaatgcata 1484549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 5853443 - 5853307
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  5853443 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 5853345  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  5853344 acgtctcaattattcacatataattcaagtaatgcata 5853307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20403238 - 20403374
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  20403238 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 20403336  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  20403337 acgtctcaattattcacatataattcaagtaatgcata 20403374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 22001764 - 22001900
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  22001764 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 22001862  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  22001863 acgtctcaattattcacatataattcaagtaatgcata 22001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 4542524 - 4542388
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag-taaacaaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |   || || | |||||| |||||||||||||||||| | ||| ||| |||    
T  4542524 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaacaagatacaaaaacagcatgacataataatatcaaatgcaagtcaacaa 4542425  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcata 140  Q
    | ||| |  ||| || ||||  |||||||||||||||    
T  4542424 cgtctcaattattcacatatagttcaagtaatgcata 4542388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 26225398 - 26225295
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |  || || || ||||||||||||||||||||||||| | ||| ||| |||    
T  26225398 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acaatatacaaaacagtatgacataataatatcaaatacaagtcaacaa 26225300  T
Q  104 catct 108  Q
    |||||    
T  26225299 catct 26225295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 15203382 - 15203297
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15203382 atcaacttagagcgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 15203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 41598199 - 41598335
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||| | | |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  41598199 atcaacttagaccgactcatgcagcttagttgaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 41598297  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  41598298 acgtctcaattattcacatataattcaagtaatgcata 41598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6520382 - 6520439
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  6520382 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 6520439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17140926 - 17140987
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  17140926 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 17140987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21491005 - 21491066
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  21491005 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 21491066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 38855358 - 38855301
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  38855358 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 38855301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 983512 - 983456
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  983512 tcaacttagaccgactcatgcagcttagttaaataacaatcagcaacataggcagta 983456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 18678209 - 18678102
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| |||| |||||||||  || |  ||||| | ||||||| |||||||||| ||||||| ||    
T  18678209 atcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaaca 18678110  T
Q  103 acatctta 110  Q
    ||||||||    
T  18678109 acatctta 18678102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 23760950 - 23760894
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  23760950 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 23760894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 32121746 - 32121853
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| |||| |||||||||  || |  ||||| | ||||||| |||||||||| ||||||| ||    
T  32121746 atcaacttagaatgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaaca 32121845  T
Q  103 acatctta 110  Q
    ||||||||    
T  32121846 acatctta 32121853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 19896276 - 19896323
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19896276 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 19896323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20046346 - 20046299
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20046346 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 20046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 45290846 - 45290761
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  45290846 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 45290761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 4483292 - 4483427
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  4483292 atcaacttagaccgactcatgcagcttagtt-aataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 4483389  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  4483390 acgtctcaattattcacatataattcaagtaatgcata 4483427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 41598421 - 41598517
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| | |||||||||||| |||| ||||||| ||||| |||||||||||  |||||| || |||||  || ||||||||||||||||||||||||    
T  41598421 ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcctc 41598517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5866385 - 5866324
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| || |||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  5866385 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 5866324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 15070571 - 15070654
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||| | | |||| ||  |||||| ||||||||||||||||||    
T  15070571 caacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 15070654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 26355807 - 26355748
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  26355807 tcatcaacttagaccgactcatgcagcttagttaaacaacaaacaacaacataggcagta 26355748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 26223930 - 26224034
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||| | | ||| || ||  ||| || |||||||||||||||||| | ||| ||| ||    
T  26223930 atcaacttagatcgacccatgcagcttaattaaataacaacagcaata-aagcaatatacaaaaatagcatgacataataatatcaaatgcaagtcaaca 26224028  T
Q  103 acatct 108  Q
    ||||||    
T  26224029 acatct 26224034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 19801527 - 19801383
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatct 108  Q
    |||||| || ||||| ||||||||||||||||||| ||||||| |  ||||| || |||||| ||||||||||||||||||   ||| ||| |||| |||    
T  19801527 cttagaccggctcatgcagcttagttaaataacaatagcaacaca-acagtatacaaaacagcatgacataataatatcaaacgcaagtcaacaacgtct 19801429  T
Q  109 tatgtatacaaatattcttcaagtaatgcataaac-attataacac 153  Q
     |  ||| || ||||  ||||||||||||||| || ||||||||||    
T  19801428 caattattcacatataattcaagtaatgcatatacaattataacac 19801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21285611 - 21285668
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| |||||| |||||||||| |||| ||||||||||||||    
T  21285611 atcaacttagaccgactcatgcagctttgttaaataacaaacaacaacataggcagta 21285668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 19937157 - 19937114
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    |||||||| || |||||||| |||||||||||||||||||||||    
T  19937157 atcaacttggaccgactcatgcagcttagttaaataacaacagc 19937114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21249394 - 21249434
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataa 41  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  21249394 cttcaacaacttagaccgactcatgcagcttagttaaataa 21249434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21255232 - 21255272
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataa 41  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  21255232 cttcaacaacttagaccgactcatgcagcttagttaaataa 21255272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 21673716 - 21673772
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggca 58  Q
    ||||||||||||| |||||||| || | |||||||||||| |||| |||||||||||    
T  21673716 tcatcaacttagaccgactcatgcatcatagttaaataacaaacaacaacataggca 21673772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 24353039 - 24353091
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  24353039 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 24353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 37116366 - 37116418
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  37116366 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 37116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 1160 - 841
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| |||||||||||| ||| || || |||||||||||||| |||| ||  |||||||||| |||||||||||||||||    
T  1160 cttcaacatcttagaccgactcatgcagcttagttaattaataaacatcaacataggcagtatacaa-catcatgacataattatatcaatttcaattca 1062  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  1061 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagattatag 962  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||| |||    
T  961 ttaacctcattcttaagacttaatcctacccaagggttcaactctcgacaaatcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgggt 862  T
Q  300 cactcgcgaggcgagagcctc 320  Q
     ||||||||||||||||||||    
T  861 tactcgcgaggcgagagcctc 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 14053412 - 14053091
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || ||||||||||||||| || |||||||||||||||| || || ||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  14053412 cttcaacatcttagatcgactcatgcaacttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattca 14053313  T
Q  100 tcaacat-cttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||    
T  14053312 tcaacattcttatgcatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagattata 14053213  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  14053212 attaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctggg 14053113  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    |||||||| |||||||||||||    
T  14053112 tcactcgcaaggcgagagcctc 14053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 12902767 - 12903089
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||  |||||    
T  12902767 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattc 12902866  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||    
T  12902867 atcaacatcttaaatattcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattat 12902966  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | |||||||| |  | |||||||||| |||||||| |||||||||||| ||   |||||| ||||||||||||||||| |||||| |||||||||||| |    
T  12902967 aattaacctcttcattaagtcttaatcctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgg 12903066  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||| |||||||    
T  12903067 gtcactcgcgaggcgggagcctc 12903089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 7088887 - 7089209
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  7088887 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 7088986  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||| ||||||| ||| ||||||| | |||||||| ||||||  || |||||||||||||    
T  7088987 atcaacatcttacatattcaaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattat 7089086  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | |||||||| |  | |||||||||| |||| ||| ||||||||||||||| | || ||| ||||||||||||||||| |||||| |||||||||||  |    
T  7089087 aattaacctcttcattaagtcttaatgctactcaaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatctaacaagacactctgtttccgg 7089186  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  7089187 gtcactcgcgaggcgagagcctc 7089209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 44052839 - 44053157
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| |||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  44052839 cttcatcaacttaggccgactcatgcagctcagttaaataacaacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 44052938  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||  | ||||||||| ||| |||||||||||| || || ||||||  ||||||||||||||||    
T  44052939 atcaacatcttaaatattcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattat 44053038  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |    
T  44053039 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgg 44053138  T
Q  298 gtcactcgcgaggcgagag 316  Q
    |||||||||||||||||||    
T  44053139 gtcactcgcgaggcgagag 44053157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22636445 - 22636766
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||  |||||  ||| |||||||||||||||||||| ||||||    
T  22636445 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattc 22636544  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||| ||||||  ||||||||||||||||    
T  22636545 atcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatcttaa-cagcttcacagattat 22636643  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |    
T  22636644 aattaacatcctcgttaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgg 22636743  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||| ||||||||||||||    
T  22636744 gtcactcgtgaggcgagagcctc 22636766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 23374470 - 23374148
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||  ||||||||| ||||||    
T  23374470 cttcaacaacttagaacgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattc 23374371  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||||| |  |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||   ||||||| |||||||    
T  23374370 aacaacatcttaaatattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattat 23374271  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    |||||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| |||||||| |||||||| ||||||||||||||||||| |    
T  23374270 agttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgg 23374171  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||| |||||||||||||||||    
T  23374170 gtcacccgcgaggcgagagcctc 23374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 17046497 - 17046724
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| |||||||||||| |||| | || ||  |||||||||| ||||||| |||||||||    
T  17046497 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagtatagaa-caacatgacataattatatcaaattcaattca 17046595  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||     
T  17046596 tcaacatcttatgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataa 17046695  T
Q  200 ttaacctcattctcaagtcttaattctac 228  Q
    ||||||| ||| | |||||||||| ||||    
T  17046696 ttaaccttattattaagtcttaatcctac 17046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 16377632 - 16377310
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcat 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||| |||     
T  16377632 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaa 16377533  T
Q  101 caacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||  ||||||  ||||| |||||||||||     
T  16377532 caacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataa 16377433  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctc-gacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
    ||||| ||||  | |||||| ||| |||||| | ||||||||||||  |  | |||||| |||||||| ||||||||| |||||| |||| ||||||| |    
T  16377432 ttaacatcatcattaagtctcaatactaccccaaggttcaactctcataaaactcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgg 16377333  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||| ||||||||||||||    
T  16377332 gtcactcgtgaggcgagagcctc 16377310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 16240080 - 16239764
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| | |||||| || |||| ||||||||||| ||||| |||||||||| ||||| ||| |||||||||||||||||| | ||| |||    
T  16240080 cttcatcaacttagaccaactcatgcaacttaattaaataacaatagcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtca 16239981  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| ||| |||||||||| | ||||||||| ||  |||||||||||| ||||| ||||||  ||||||| |||||||||    
T  16239980 acaacatcttaaatattcaattatactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattata 16239881  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||||||| |||||| |  ||||||||||| || | |||||| ||||||||||||||| || ||||||||||||||||||| |    
T  16239880 attaacatcatcattaagtcttaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctgg 16239781  T
Q  298 gtcactcgcgaggcgag 314  Q
    |||||||||||||||||    
T  16239780 gtcactcgcgaggcgag 16239764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 117 - 320
Target Start/End: Original strand, 3096772 - 3096975
Alignment:
Q  117 caaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaag 216  Q
    |||||||||||||||||||||||||||||| || | | ||||||||| |||||||| ||||||  |||||||||| |||||| ||||||||||  | |||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaag 3096871  T
Q  217 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 316  Q
    | || || |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  3096872 tatttatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagag 3096971  T
Q  317 cctc 320  Q
    ||||    
T  3096972 cctc 3096975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 7893713 - 7894033
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  7893713 cttcatcaacttagaccgattcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 7893812  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| |||||||||||||| | | ||||||  ||| |||||||   || ||||| ||||||  ||||||||||||||||    
T  7893813 aacatcatcttaaatattcaattatacttcaagtaatgcacataccattatttcacatcataat---cagcaacacatcttaaacagcttcacagattat 7893909  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | ||||||||||  ||||| | ||||||||||||| | | || ||| ||||||||||||||| || |||||| | ||||||||||     
T  7893910 aattaacatcatcgttaagtcttaatattaccccaaggttcaactctcggcaactcatgcaacaaaggtcgcaaaaacctaacaagactctctgtttctg 7894009  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||| ||||||||||||||    
T  7894010 ggtcactcgtgaggcgagagcctc 7894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 14038658 - 14038981
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  ||| |||||||||||||| | ||| ||    
T  14038658 cttcatcaacttagactgactcatgcagcttagttaaataacaacagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtc 14038757  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| || |||  ||||||||||||||||    
T  14038758 aacaacatctcaattatacattcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattat 14038857  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||  ||||  | |||||| ||| |||||| | |||||||||||   | | | |||||||| || ||||||||||| |||||| ||||||||||||     
T  14038858 aattaatatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctg 14038957  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  14038958 ggtcactcgcgaggcgagagcctc 14038981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7798784 - 7798958
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  7798784 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 7798883  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaaca 172  Q
    ||||||||||||  ||| ||| ||| |||||||||||||| | |||||| || |||  ||||||||||| |||||    
T  7798884 atcaacatcttaaatattcaattatacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 16270346 - 16270147
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||| ||||| |||||||| ||||||| ||||||||||| |||||||||||||||| || |||||| |||||||||||||||||| | ||| | |    
T  16270346 cttcatcaagttagaccgactcatgcagcttaattaaataacaatagcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtta 16270247  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  16270246 acaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 16270147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 17048055 - 17047861
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 225  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||| || || |||  ||| |  | |||||||||| |    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac 17047956  T
Q  226 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||||||||||| || | |||||| |||||||||||||| ||  ||||| |||||||||||  ||||||||||||||||||||||||    
T  17047955 tacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagagcctc 17047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52873478 - 52873367
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  52873478 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 52873379  T
Q  99 atcaacatctta 110  Q
    | || |||||||    
T  52873378 aacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 15121834 - 15121747
Alignment:
Q  77 ataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaac 165  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||    
T  15121834 ataattatatcaatt-caattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 15121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6899901 - 6900062
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||| || |||||  ||  |||||||||||||| | ||| |||    
T  6899901 cttcatcaacttagaccgactcatgcatcttagttaaataacaatagcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtca 6900000  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataa 160  Q
     ||||||||||  ||| ||| ||| |||||||||||| | | ||||||||| ||| ||||||    
T  6900001 acaacatcttaaatattcaattatacttcaagtaatgtacataacattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3096303 - 3096369
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa 67  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  3096303 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaa 3096369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 18215425 - 18215289
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  18215425 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 18215327  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  18215326 acgtctcaattattcacatataattcaagtaatgcata 18215289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 44929031 - 44928894
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| ||||||||||||| |||| | ||| |||  |    
T  44929031 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaata 44928932  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    |||||| |  ||| || ||||  |||||||||||||||    
T  44928931 acatctcaattattcacatataattcaagtaatgcata 44928894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 54798861 - 54798756
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  54798861 atcaacttagaccgactcatgcagcttagttgaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 54798762  T
Q  103 acatct 108  Q
    ||||||    
T  54798761 acatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 6190686 - 6190782
Alignment:
Q  212 tcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 308  Q
    |||||||||||| |||| | | |||||||||||||||   |||||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||    
T  6190686 tcaagtcttaatgctacgccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgcga 6190782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 12458 - 12322
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  12458 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 12360  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  12359 acgtctcaattattcacatataattcaagtaatgcata 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 14280327 - 14280431
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  14280327 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca-cggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 14280425  T
Q  103 acatct 108  Q
    ||||||    
T  14280426 acatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 15118503 - 15118367
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  15118503 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 15118405  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  15118404 acgtctcaattattcacatataattcaagtaatgcata 15118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23803416 - 23803280
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | | |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23803416 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 23803318  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23803317 acgtctaaattattcacatataattcaagtaatgcata 23803280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 44615299 - 44615435
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  44615299 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 44615397  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  44615398 acgtctcaattattcacatataattcaagtaatgcata 44615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 52312521 - 52312657
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  52312521 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 52312619  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  52312620 acgtctcaattattcacatataattcaagtaatgcata 52312657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 43256230 - 43256161
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatctt 109  Q
    |||||||||||||||||||| | || ||||  |||||||||||||||||||||||||||| |||||||||    
T  43256230 aacaacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 15091093 - 15091229
Alignment:
Q  185 cttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagt 283  Q
    |||||||||||||| ||||| || |  | |||||| ||| |||||| | |||||||||||     | | |||||||| || ||||||||||| ||||||     
T  15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaagg 15091192  T
Q  284 cactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15091193 cactctgtttctgggtcactcgcgaggcgagagcctc 15091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 12774019 - 12774078
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  12774019 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 12774078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 15355476 - 15355391
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| | |||||| ||  |||||| ||||||||||||||||||    
T  15355476 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 15355391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 19618323 - 19618238
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  ||||||||||||||||||    
T  19618323 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 19618238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 44773238 - 44773153
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  44773238 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 44773153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 51464019 - 51463934
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | | |||| ||  |||||| ||||||||||||||||||    
T  51464019 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 51463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 1837660 - 1837524
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||| ||| | ||| ||| ||    
T  1837660 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataataccaaatgcaagtcaaca 1837562  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  1837561 acgtctcaattattcacatataattcaagtaatgcata 1837524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 3515018 - 3515154
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||| | |||||| ||  |||||| | |||||||||||||||| | ||| ||| ||    
T  3515018 atcaacttagaccgactcatgcagcttagttaaaaaacaacagcaacaca-gcagtatacaaaaacagcaagacataataatatcaaatgcaagtcaaca 3515116  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  3515117 acgtctcaattattcacatataattcaagtaatgcata 3515154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 12288316 - 12288211
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaa-cagt--atgacataataatatcaatttcaattcatc 101  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||  |||| ||||  |||| |||| |||||||| | ||||||| |    
T  12288316 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatgcaattcaac 12288217  T
Q  102 aacatc 107  Q
    ||||||    
T  12288216 aacatc 12288211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 18239570 - 18239434
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| || |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  18239570 atcaacttagaccgactcatgcagcttagttaaataacaacagcagcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 18239472  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  18239471 acgtctcaattattcacatataattcaagtaatgcata 18239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 19242710 - 19242846
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  19242710 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 19242808  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  19242809 acgtctcaattattcacatataattcaagtaatgcata 19242846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 50222490 - 50222354
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  || || ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  50222490 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acattatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 50222392  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  50222391 acgtctcaattattcacatataattcaagtaatgcata 50222354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 7798968 - 7799029
Alignment:
Q  259 acaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||| | |||||| |||| ||||||| ||||||||||||||||||||||||    
T  7798968 acaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgcgaggcgagagcctc 7799029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15551827 - 15551888
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  15551827 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 15551888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 44928798 - 44928711
Alignment:
Q  234 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || ||||||||||||||||||||||||    
T  44928798 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctc 44928711  T

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Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12610961 - 12611090
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaac 104  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |      | | |||||| |||||||||||||||||| | ||| ||| ||||    
T  12610961 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca------acaaaaacagcatgacataataatatcaaatgcaaatcaacaac 12611054  T
Q  105 atcttatgtatacaaatattcttcaagtaatgcata 140  Q
     ||| |  ||| || ||||  |||||||||||||||    
T  12611055 gtctcaattattcacatataattcaagtaatgcata 12611090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 52243302 - 52243246
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  52243302 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 52243246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 7641333 - 7641286
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  7641333 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 7641286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 8846368 - 8846427
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||    
T  8846368 tcatcaacttagaccgacttattcagcttagttaaataacaaacagcaacataggcagta 8846427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 8574971 - 8574871
Alignment:
Q  8 aacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacat 106  Q
    |||||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| || |||||  |||||||||||||||||| |  |||||| ||||||    
T  8574971 aacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaacaacatgacataataatatcaaatgtaattcaacaacat 8574873  T
Q  107 ct 108  Q
    ||    
T  8574872 ct 8574871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 22353852 - 22353984
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| |||||||| ||||||||||||||| |||||||||  |  |  ||||  ||||||||| |||||||||| ||||||| |||| ||    
T  22353852 cttagaccgactcatgcagcttaggtaaataacaacagcagcataggcagattgtagcaacaacatgacataacaatatcaattacaattcaacaacgtc 22353951  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata 140  Q
    | |  ||| || ||||  |||||||||||||||    
T  22353952 tcaattattcacatataattcaagtaatgcata 22353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 39706395 - 39706338
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  39706395 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 39706338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 14970858 - 14970773
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||| | | ||| || ||  |||||| ||||||||||||||||||    
T  14970858 atcaacttagaccaactcatgcagcttagttaaataacaacagcaaaaca-gcaatatacaaaaacagcatgacataataatatcaa 14970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 44102225 - 44102310
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| |||||||||||||||||||||  |||| | | |||| ||  |||||| ||||||||||||||||||    
T  44102225 atcaacttagaccgactcatgcagcttagttaaataacaacaataacaca-gtagtatacaaaaacagcatgacataataatatcaa 44102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 43198661 - 43198611
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacatag 55  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  43198661 tcaacttagaccgactcatgcagcttagttaaataacaaacagcaacatag 43198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 13953 - 13853
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||  | |||||  |||| |||| |||||||| | ||| |||||||||||    
T  13953 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatc 13854  T
Q  108 t 108  Q
    |    
T  13853 t 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15367708 - 15367789
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15367708 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 15367789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15370036 - 15370117
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15370036 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 15370117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15371220 - 15371301
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15371220 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 15371301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15373501 - 15373582
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15373501 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 15373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15402721 - 15402802
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  15402721 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 15402802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 16223550 - 16223629
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatc 87  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||    
T  16223550 acttagactgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatc 16223629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 13507 - 13827
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||  ||||||| |||||||||||||| |||||    
T  13507 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattca 13606  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||||     
T  13607 tcaacatcttatgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataa 13706  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||||||| | |||||||||| ||||| || ||||||||||||||| | |||||| ||||| ||||||||||| ||||||||||||||||||| |||    
T  13707 ttaacctcattgttaagtcttaatcctaccgaaaggttcaactctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggt 13806  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    | |||||||||||||||||||    
T  13807 cgctcgcgaggcgagagcctc 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 320
Target Start/End: Original strand, 51601 - 51911
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatct 108  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||  |||||||||| ||| ||| ||||||||||||||||||    
T  51601 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-catcatgacataattataacaaattcaattcatcaacatct 51699  T
Q  109 tatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctca 208  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51700 tatgtatacaaatatccttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagattatagttaacctca 51799  T
Q  209 ttctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 308  Q
     ||| |||||||||| |||||||||||| ||| ||||||| | |||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  51800 ctcttaagtcttaatcctacccaagggtccaattctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggtcactcgcga 51899  T
Q  309 ggcgagagcctc 320  Q
    ||||||||||||    
T  51900 ggcgagagcctc 51911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 21293080 - 21292759
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaat-ttcaa-ttc 98  Q
    ||||| || |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  21293080 cttcaacatcttagaccgattcatgcagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattc 21292981  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||||    
T  21292980 atcaacatcttaggtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagattata 21292881  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||||||||| | |||||||||| |||||||||||| |||||| |||| | |||||| ||||||||||||||||| || |||||||||| ||||| ||    
T  21292880 attaacctcattattaagtcttaatcctacccaagggtccaactcccgacaactcgtgcaacaaaggtcgcaaaatctaaaaagtcactctatttctggg 21292781  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  21292780 tcactcgcgaggcgagagcctc 21292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 8286954 - 8286631
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa---cagtatgacataataatatcaatttcaatt 97  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||   ||| |||||||||||||||||||| |||||    
T  8286954 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaatt 8286855  T
Q  98 catcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 196  Q
    |||||||||||||  ||  |||| ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| | ||    
T  8286854 catcaacatcttaaataatcaaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataata 8286755  T
Q  197 tagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctc 296  Q
    || ||||| || |  | |||||||||| |||||||| |||||||||||| || | ||  || ||||||||||||||||| |||||||||||||||||||     
T  8286754 taattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcaagcaacaaaggtcgcaaaatctaacaagtcactctgtttctg 8286655  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  8286654 ggtcactcgcgaggcgagagcctc 8286631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 23390607 - 23390285
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||  ||  |||||||||||||||||||| ||||||    
T  23390607 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattc 23390508  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   |||||||||||||||    
T  23390507 atcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattat 23390408  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| |||||| ||||||||||   |    
T  23390407 aattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagg 23390308  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||| ||||||| ||||||    
T  23390307 gtcactcgtgaggcgatagcctc 23390285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22075029 - 22075351
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| |||||  ||  |||||||||||||||||||| ||||||    
T  22075029 cttcaacaacttagaccgactcattcagcttagttaaataacaacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattc 22075128  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||||| |  |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||| |||||    
T  22075129 aacaacatcttaaatattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattat 22075228  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctg-tttctc 296  Q
    | |||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||| | |||||||||||||| |||||     
T  22075229 aattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaagtcactctgttttctg 22075327  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  22075328 ggtcactcgcgaggcgagagcctc 22075351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 25421542 - 25421865
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||  |||||||||||||||||||| ||| ||    
T  25421542 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtc 25421641  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  ||||||||||||||||    
T  25421642 aacagcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattat 25421741  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||| ||||||     
T  25421742 aattaacatcatcattaagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttcta 25421841  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  25421842 ggtcactcgcgaggcgagagcctc 25421865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 13095505 - 13095827
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||| ||||| ||| |||||||| | ||||||| | ||| |||    
T  13095505 cttcatcaacttagaccgactcatgcagcatagttaaataacaatagcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtca 13095604  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||||    
T  13095605 acaacatcttaaatattcaattatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattata 13095704  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||||||| |||||| | |||||||||||| |||| |||||| ||||||||||||||| || ||||||||||||||||||| |    
T  13095705 attaacatcatcattaagtcttaatactaccccaaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctag 13095804  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||| |||||    
T  13095805 gtcactcgcgaggcgagggcctc 13095827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 24493579 - 24493901
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||||| ||||| |||||| |||||||||||||||| ||||| ||| |||||||||||||||||| | ||| |||    
T  24493579 cttcatcaacttagaccgactcatgcagcttggttaagtaacaatagcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtca 24493678  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||||| ||||| | ||||||||| ||| |||||||||||| ||||||||||||   ||||||||||||||||    
T  24493679 acaacatcttaaatattcaattatacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattata 24493778  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||| | |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||| | |    
T  24493779 attaacatcattattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttatgg 24493878  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    || |||| |||||||| ||||||    
T  24493879 gttactcacgaggcgaaagcctc 24493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 13025321 - 13025642
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||| ||||| ||| |||||||| | ||||||| | ||| |||    
T  13025321 cttcatcaacttagaccgactcatgcagcatagttaaataacaatagcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtca 13025420  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||||    
T  13025421 acaacatcttaaatattcaattatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattata 13025520  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||||||| |||||| | |||||||||||| || |||||||| ||||||||||||||| || ||||||||||||||||||| |    
T  13025521 attaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctag 13025620  T
Q  298 gtcactcgcgaggcgagagcct 319  Q
    ||||||||||||||||| ||||    
T  13025621 gtcactcgcgaggcgagggcct 13025642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 9077962 - 9078285
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    |||||||||||||||  ||| ||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||| | ||| ||    
T  9077962 cttcatcaacttagactgacccatgcagcttagttaaataacaacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtc 9078061  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||   ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  9078062 aacaacatctcaattatacattcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 9078161  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || ||||||||||| |||||| ||||||||||||     
T  9078162 aattaacatcatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctg 9078261  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  9078262 ggtcactcgcgaggcgagagcctc 9078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 24529230 - 24529553
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||  |||||||||| ||||||| | ||| ||    
T  24529230 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtc 24529329  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||||||   ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  ||||||||||||||||    
T  24529330 aacaacatcttaattatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattat 24529429  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    ||||||| ||||  | |||| | ||| |||||| | |||||||||||| || | | |||| ||||||||||||||| || |||||| | ||||||||||     
T  24529430 agttaacatcatcattaagtttcaatactaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctg 24529529  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  24529530 ggtcactcgcgaggcgagagcctc 24529553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 25431414 - 25431727
Alignment:
Q  11 ttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaacatct 108  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||  ||  |||||||||||||||||||| ||| ||| ||||||||    
T  25431414 ttagaccgactcatgcatcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatct 25431513  T
Q  109 tatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctc 207  Q
    ||  | | ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  ||||||||||||||||| ||||| ||    
T  25431514 taaatgttcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatc 25431613  T
Q  208 attctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgc 306  Q
    ||  | |||||| ||| |||||  | |||||||||||| || | |||||  |||||||||||||||||| |||||| |||||  ||||| ||||||||||    
T  25431614 atcattaagtctcaatgctacctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgc 25431713  T
Q  307 gaggcgagagcctc 320  Q
    |||| |||||||||    
T  25431714 gaggtgagagcctc 25431727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 1096477 - 1096800
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||  ||||  ||  || ||||||||||||||| | ||| ||    
T  1096477 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatc 1096576  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| |  ||||||   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  |||||||| || ||||    
T  1096577 aacaacatctcacatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttat 1096676  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| || |  | |||||| ||| |||||| | ||| ||||| |  || | | |||||||| || ||||||||| | || ||| || |||||||||     
T  1096677 aattaacatcctcattaagtctcaatactaccccaaggtccaacttttaacaacttgtgcgacagagatcgcaaaattctaaaaaggcattctgtttctg 1096776  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  1096777 ggtcactcgcgaggcgagagcctc 1096800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21729175 - 21729032
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  21729175 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattc 21729076  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa 142  Q
    | ||||||||||  ||| |||||| |  ||||||||||||||||    
T  21729075 aacaacatcttaaatattcaaataattctcaagtaatgcataaa 21729032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21808500 - 21808357
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  21808500 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattc 21808401  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa 142  Q
    | ||||||||||  ||| |||||| |  ||||||||||||||||    
T  21808400 aacaacatcttaaatattcaaataattctcaagtaatgcataaa 21808357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 21986130 - 21985935
Alignment:
Q  127 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 225  Q
    |||||||||||||| |||||| || ||| ||||| |||||| ||||| ||||||  || ||||||| |||||||||||| ||||  |||||||| ||| |    
T  21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac 21986031  T
Q  226 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||||||||||||||||| |||||    
T  21986030 taccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcctc 21985935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 320
Target Start/End: Complemental strand, 22107357 - 22107162
Alignment:
Q  126 ttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 224  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||| | ||||  ||||||||||||||||| |||||||| |  | ||||||||||     
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata 22107258  T
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||| ||| |||||| ||||| || | |||||| |||||||||||||| |   ||||| |||||| ||||  ||||||||||||||||||||||||    
T  22107257 ctactcaaaggttcatctctcaacaactcgtgcaacaaaggtcgcaaagtatcacaaggcactctatttccgggtcactcgcgaggcgagagcctc 22107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 22032333 - 22032529
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagt-atgacataataatatcaatttcaattcatcaa 103  Q
    |||| |||| |||||||||| || ||| ||| |||||||| ||||||||||||||   ||||||| | ||||  |||| ||| ||||| |||||||||||    
T  22032333 atcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaaacaatcatga--taattataccaatt-caattcatcaa 22032429  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || |||||||||||||||  ||||||    
T  22032430 catcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagcttcacagattgcagttaa 22032528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 18770022 - 18769910
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||||    
T  18770022 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttcac 18769924  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  18769923 agattgcagttaac 18769910  T

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Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21997645 - 21997555
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||  ||||||||||||||||||    
T  21997645 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaa 21997555  T

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Target: chr5; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 23572180 - 23572254
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaac 165  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||    
T  23572180 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 23572254  T

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Target: chr5; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 18356364 - 18356488
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat 139  Q
    |||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||| |||||||||   ||| ||||||||  | |||||||||||    
T  18356364 aacaacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcat 18356463  T
Q  140 -aaacattataacacttcataatca 163  Q
     |||||||||| ||| | |||||||    
T  18356464 aaaacattatatcacattataatca 18356488  T

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Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 18418594 - 18418699
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaa-taacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||||  ||||| | || |||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||| || ||||||| |||    
T  18418594 atcaacttagactgactcgtgcaacttagttaaaataacaacatcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caa 18418692  T
Q  104 catctta 110  Q
    |||||||    
T  18418693 catctta 18418699  T

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Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 20910869 - 20910800
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatctt 109  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||||| |||||||||    
T  20910869 aacaacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 22412198 - 22412302
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| ||||||||  |||||||||||||||| | | |||||||||||||| || |||||| |||||||||||||||||| | ||| ||| |||    
T  22412198 atcaacttagaccgactcatgtagcttagttaaataacgataacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaa 22412297  T
Q  104 catct 108  Q
    |||||    
T  22412298 catct 22412302  T

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Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37723913 - 37724020
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || ||||||  ||||||| |||||||||||||||||| |||||||||||||||||| || ||||| ||||||| || ||||||| || ||||||    
T  37723913 cttcaacatcttagactgactcatgcagcttagttaaataacagacagcaacataggcagtatac-aacagcatgacatgattatatcaaattaaattca 37724011  T
Q  100 tcaacatct 108  Q
    |||||||||    
T  37724012 tcaacatct 37724020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 264919 - 264783
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  264919 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 264821  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  264820 acgtctcaattattcacatataattcaagtaatgcata 264783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 10733091 - 10732955
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  10733091 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 10732993  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  10732992 acgtctcaattattcacatataattcaagtaatgcata 10732955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 20902159 - 20902075
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| ||||||||||||||||||    
T  20902159 tcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 20902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 29345991 - 29346127
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  29345991 atcaacttagaccgactcatacagcttagttaaataacaacagcatcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 29346089  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  29346090 acgtctcaattattcacatataattcaagtaatgcata 29346127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 39363395 - 39363531
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  39363395 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 39363493  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  39363494 acgtctcaattattcacatataattcaagtaatgcata 39363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 22959641 - 22959582
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  22959641 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 22959582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 39245147 - 39245232
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  39245147 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 39245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 20027043 - 20026942
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagt--atgacataataatatcaatttcaattcatcaaca 105  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||||  | |||||||  |||| ||||||||||||| | ||||||| |||||    
T  20027043 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaaca 20026944  T
Q  106 tc 107  Q
    ||    
T  20026943 tc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20909023 - 20909159
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  20909023 atcaacttagaccgactcatgcagcttagttaaataacaaaagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 20909121  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  20909122 acgtctcaattattcacatataattcaagtaatgcata 20909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 29329945 - 29330081
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  29329945 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 29330043  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  29330044 acgtctcaattattcacatataattcaagtaatgcata 29330081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 29348464 - 29348600
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| || |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  29348464 atcaacttagaccgactcatacagcttagttaaataagaacagcatcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 29348562  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  29348563 acgtctcaattattcacatataattcaagtaatgcata 29348600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 29350937 - 29351073
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| || |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  29350937 atcaacttagaccgactcatacagcttagttaaataagaacagcatcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 29351035  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  29351036 acgtctcaattattcacatataattcaagtaatgcata 29351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 32027404 - 32027540
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  32027404 atcaacttagaccgactcatacaacttagttaaataacaacaacaacaca-acagtatacaaaaacagcatgacataataatatcaaatccaagtcaaca 32027502  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  32027503 acgtctcaattattcacatataattcaagtaatgcata 32027540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 42245516 - 42245380
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  42245516 atcaacttagaccgactcatgcaacttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 42245418  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  42245417 acgtctcaattattcacatataattcaagtaatgcata 42245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19660946 - 19660885
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  19660946 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 19660885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21329604 - 21329547
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  21329604 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 21329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 2154765 - 2154680
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  2154765 atcaacttagaccgactcatgcagcttagttaaataacaatagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 2154680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 11581350 - 11581303
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  11581350 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 11581303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 18319185 - 18319100
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||| | |||||||| ||||||||||||||||||||||| ||| | |||||| ||  |||||| ||||||||||||||||||    
T  18319185 atcaacttaaaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 18319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20918099 - 20918052
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20918099 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 20918052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 21565554 - 21565613
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||    
T  21565554 tcatcaacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagta 21565613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 36154712 - 36154616
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | ||||||||||||||||||||||||    
T  36154712 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctc 36154616  T

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Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 36154931 - 36154798
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||| | |||   |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  36154931 atcaacttagaccgactcatgcagcttagttaaataacaacaac-aca---gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 36154836  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  36154835 acgtctcaattattcacatataattcaagtaatgcata 36154798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 10775827 - 10775742
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| ||| | |||||| | |||  ||| ||||||||||||||||||    
T  10775827 atcaacttagaccgactcatgcagcttagttaaataacgacagcgacaca-gcagtatataaaaccagcatgacataataatatcaa 10775742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 31061079 - 31061164
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| || |||||||||||||||||||||| | | | |||| ||  |||||| ||||||||||||||||||    
T  31061079 atcaacttagaccgactcatgcaacttagttaaataacaacagcaaaaca-gtagtatacaaaaacagcatgacataataatatcaa 31061164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 38619445 - 38619530
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||| | ||| | | |||| ||  |||||| ||||||||||||||||||    
T  38619445 atcaacttagaccgactcatgcagcttagttaaataacaacaacgacaca-gtagtatacaaaaacagcatgacataataatatcaa 38619530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21502263 - 21502206
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  21502263 atcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 21502206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 23064522 - 23064563
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaaca 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  23064522 atcaacttagaccgactcatgcagcttagttaaataacaaca 23064563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 26732937 - 26732884
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataacaacagcaacataggcagt 60  Q
    |||| |||| |||||||| ||||||||||||  |||||||||||||||||||||    
T  26732937 caacatagaccgactcatgcagcttagttaataaacaacagcaacataggcagt 26732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36314587 - 36314648
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| || |||||| |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  36314587 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagta 36314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 17517308 - 17517201
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || ||||||| |||||||| |||| |||||||||  || |  ||||| | ||||||| |||||||||  ||||||| ||    
T  17517308 atcaacttagactgactcatgcaacttagtttaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaatcgcaattcaaca 17517209  T
Q  103 acatctta 110  Q
    ||||||||    
T  17517208 acatctta 17517201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 22144068 - 22144168
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataaca-acagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| |||||||||||||||||| ||| ||||||||| ||||  | |||||  |||| |||| |||||||||| ||| ||| |||||||    
T  22144068 cttagaccgactcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatc 22144167  T
Q  108 t 108  Q
    |    
T  22144168 t 22144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 26012141 - 26012085
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  26012141 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 26012085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 26704089 - 26704139
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||| |||||||| |||||| |||||||||||| |||| |||||||||    
T  26704089 acttagaccgactcatgcagcttggttaaataacaatagcagcataggcag 26704139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 26740747 - 26740697
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagt 60  Q
    |||||| |||||||| ||||||||||||  |||||||||||||||| ||||    
T  26740747 cttagaccgactcatgcagcttagttaataaacaacagcaacatagacagt 26740697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 26973822 - 26973872
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||| |||||||| |||||| |||||||||||| |||| |||||||||    
T  26973822 acttagaccgactcatgcagcttggttaaataacaatagcagcataggcag 26973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 22412340 - 22412388
Alignment:
Q  155 tcataatcaacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    |||||||||||| ||||| ||||||  ||||||||||||||||| ||||    
T  22412340 tcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 10534 - 10215
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| ||||||||| |||||||| |||| ||||||| |||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  10534 cttcaacaacttagaccgactcatgcagcatagttaattaacaaacagcaacataggcagtatacaa-cagcatgacataataatatcaatttcaattca 10436  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
     |||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||||| |||||||||||||||||     
T  10435 acaacatcttaagtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataa 10336  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||||||| ||||||||||||||||||| |||    
T  10335 ttaaccttattattaagtcttaattctacccaagggttcaactctcgacaactcgtgcaacaatggtcgcaaaatctaacaagtcactctgtttctgggt 10236  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  10235 cactcgcgaggcgagagcctc 10215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 15574 - 15254
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||| |||||||||  ||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  15574 cttcaacaacttagactgactcatgcagcttagttaaataacaagagcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattca 15475  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||     
T  15474 tcaacatcttatgtataaaaatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataa 15375  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||| ||| | |||||||||| |||||||| |  |||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  15374 ttaaccttattattaagtcttaatcctacccaacgagtcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggt 15275  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  15274 cactcgcgaggcgagagcctc 15254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 7391 - 7465
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaac 165  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| |||||    
T  7391 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaac 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 20698546 - 20698225
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| ||||| |||||||||||||| ||||||    
T  20698546 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattc 20698447  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||   |||||||||||||||||    
T  20698446 atcaacatcttatatattcaaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattata 20698347  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||| ||||  | |||||||||||||| |||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  20698346 attaacatcatcattaagtcttaattctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaatctaacaagtcactctgtttctggg 20698247  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  20698246 tcactcgcgaggcgagagcctc 20698225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 13442284 - 13442606
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| |||||  ||  |||||||||||||||||||| ||||||    
T  13442284 cttcatcaacttagaccgactcatgcagcttagttaaataacaacggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattc 13442383  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  13442384 atcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 13442483  T
Q  198 agttaacctcattctcaagtcttaat-tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||||||| ||  ||||||| ||||||||||||| | |||||| ||||||||||||||||| |||||| ||||||||||||     
T  13442484 aattaacatcatcattaagtcttaatgtcatcccaagg-ttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctg 13442582  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  13442583 ggtcactcgcgaggcgagagcctc 13442606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 17487866 - 17488189
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||| |||||  ||| |||||||||||||||||||| ||||||    
T  17487866 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattc 17487965  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  ||| ||||||||||||    
T  17487966 atcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattat 17488065  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctg-tttctc 296  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| ||||||| |||||     
T  17488066 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgttttcta 17488165  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  17488166 ggtcactcgcgaggcgagagcctc 17488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 17499348 - 17499671
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||| |||||  ||| |||||||||||||||||||| ||||||    
T  17499348 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattc 17499447  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||||||| ||| ||| |||||||| ||||| ||||||  ||| |||||| |||||    
T  17499448 atcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattat 17499547  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctg-tttctc 296  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| ||||||| |||||     
T  17499548 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgttttcta 17499647  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||| | ||||||||||||||    
T  17499648 ggtcactagagaggcgagagcctc 17499671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 320
Target Start/End: Complemental strand, 14576940 - 14576621
Alignment:
Q  4 catcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaaca-aacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||||||||| ||| ||| ||    
T  14576940 catcaacttagaccgactcattcaacttagttaaataacaacagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaaca 14576841  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    ||||||||  ||| ||| ||| |||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  || |||||||||||||| ||    
T  14576840 acatcttaaatattcaattatacttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataatt 14576741  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | || ||||||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| |||| ||||||| ||||    
T  14576740 aacatcatcattaaatcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtc 14576641  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  14576640 actcgcgaggcgagagcctc 14576621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 18438544 - 18438867
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||  ||| |||| ||||||||||||| | ||| ||    
T  18438544 cttcatcaacttagaccgactcatgtagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtc 18438643  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||| | ||||||   ||   |||||||||||||| ||||||||| ||| ||||| |||||| ||||| ||||||  ||||||||||||||||    
T  18438644 aacaacatcttttttatacattcatatctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattat 18438743  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    ||||||| ||||  | |||||| ||| |||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||||| ||||||||||||     
T  18438744 agttaacatcatcattaagtctcaatactaccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctg 18438843  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  18438844 ggtcactcgcgaggcgagagcctc 18438867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 26686897 - 26687219
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||||||||||||||| ||| ||    
T  26686897 cttcttcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc 26686996  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| | | ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  ||||||||||||||||    
T  26686997 aacatcatcttaaatattccattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattat 26687096  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||  ||| |||||| |  ||||||||||| |||| |||||| |||||||||| |||| | |||||| |||||||||||| |    
T  26687097 aattaacatcctcattaagtcccaatactaccccaaagttcaactctcaacgattcgtgcaacaaaggtcgtaaaacctaacaagacactctgtttctgg 26687196  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  26687197 gtcactcgcgaggcgagagcctc 26687219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 12399219 - 12399537
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||| | ||||||    
T  12399219 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattc 12399318  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||||| |  ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||   |||||||||||||||    
T  12399319 aacaacatcttaaatattcaaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattat 12399418  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    |||||||||| |  | | |||||||| |||||||| || | ||  | | || | |||||| |||||||||| |||| | |||||||||  |||||||| |    
T  12399419 agttaacctcttcattatgtcttaatgctacccaaaggcttaatccccaacaactcgtgcaacaaaggtcggaaaa-ctaacaagtca--ctgtttctgg 12399515  T
Q  298 gtcactcgcgaggcgagagcct 319  Q
    |||||||| |||||||||||||    
T  12399516 gtcactcgtgaggcgagagcct 12399537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 23083472 - 23083150
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  23083472 cttcatcaacttagaccgactcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtc 23083373  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| ||| | | |||| ||||||||| | ||||||||| ||| |||||||||| | ||||| ||||||  |||||||||||||| |    
T  23083372 aacaacatcttaaatattcaattttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgt 23083273  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||    |||||||||| |||||  | |||||||||||  || | |||||| ||||||||||||||| | |||||| |||| ||||||| |    
T  23083272 aattaacatcatcactaagtcttaatactacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactatgtttctgg 23083173  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||| ||||||||||||||||||    
T  23083172 gtcattcgcgaggcgagagcctc 23083150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 14972864 - 14973187
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||| | ||| ||    
T  14972864 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatc 14972963  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| || ||||||   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| |||||||    
T  14972964 aacaacatctcatatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattat 14973063  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||||||   | | | |||||||| |  ||||||||||| |||||| ||||||||||||     
T  14973064 aattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaaatcctaacaaggcactctgtttctg 14973163  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||| ||||||||||||||||    
T  14973164 ggtcacttgcgaggcgagagcctc 14973187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 320
Target Start/End: Original strand, 14572602 - 14572921
Alignment:
Q  4 catcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||   | ||| ||    
T  14572602 catcaacttagaccgactcatgcagcttagttaaataacaacagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaaca 14572701  T
Q  103 acatcttatgtatacaaatattcttcaagtaatg-cataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    ||||||||  ||| ||| ||| |||||| |||||  | |||||||||| ||| |||||| |||||  |||| ||||||  || ||||||| |||||| ||    
T  14572702 acatcttaaatattcaattatacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataatt 14572801  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||  ||||||||||| ||||    
T  14572802 aacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtc 14572901  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  14572902 actcgcgaggcgagagcctc 14572921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 43840942 - 43841263
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| |||||||| ||||| ||  |||||| |||||||||||||||||||| ||| ||    
T  43840942 cttcatcaacttaaaccgactcatgcagcttagttaaataacaacaacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtc 43841041  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  ||||||||||||||||    
T  43841042 aacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattat 43841141  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||  ||| |||||| |  ||  ||||||| || | |||||  ||||||||||||||| | |||||| |||||||||||| |    
T  43841142 aattaacatcctcgttaagtcccaatactaccccaaagtcaaactctcaacaactcgtgtaacaaaggtcgcaaaacctaacaagacactctgtttctgg 43841241  T
Q  298 gtcactcgcgaggcgagagcct 319  Q
    ||||||||||||||||| ||||    
T  43841242 gtcactcgcgaggcgagggcct 43841263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 25476496 - 25476173
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||||||| ||| |||| |||||  ||| |||||||||||||||||| | ||| ||    
T  25476496 cttcatcaacttagaccgactcatgtagcttagttaaaaaacaacagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtc 25476397  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| | |||||||   ||  ||||||||||||  | ||||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||| |    
T  25476396 aacaacatctcaagtatacattcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgt 25476297  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| || |  | |||||| ||| |||||  | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  25476296 aattaacatcctcattaagtctcaatactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 25476197  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  25476196 ggtcactcgcgaggcgagagcctc 25476173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 320
Target Start/End: Complemental strand, 40213827 - 40213509
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaaca--aacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||  |||||||||||||||||||| ||||| || ||||| |||  ||||  |||||||||||||||||| | ||| ||| ||    
T  40213827 atcaacttagaccgactcatgtagcttagttaaataacaacatcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaaca 40213729  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    |||||| |  ||||||   ||  | |||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| |||||||||| ||    
T  40213728 acatctcaattatacattcataatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataatt 40213629  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | |||||| ||| |||||| | |||| ||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||    
T  40213628 aacatcatcattaagtctcaatactaccccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtc 40213529  T
Q  301 actcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||    
T  40213528 actcgcgaggcgagagcctc 40213509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 11424870 - 11424551
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||  |||   |    
T  11424870 cttcatcaacttagactgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---a 11424774  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||||| |  ||| ||   ||  |||||||||||| || ||||||||| ||| |||||| ||||  ||||| ||||||  ||||||||||||||| |    
T  11424773 tcaacatctcaattatgcattcataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaa 11424674  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| |||   | |||||| ||| |||||| |  ||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |    
T  11424673 attaacatcaacattaagtctcaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctag 11424574  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||| |||||||||||||||||||    
T  11424573 gtcgctcgcgaggcgagagcctc 11424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 24153315 - 24153115
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||| |||| || |||||| |||||||||||||||||| | ||| ||| |||    
T  24153315 atcaacttagaccgactcatgcagcttagttaaataacgatagcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaa 24153216  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtta 202  Q
    |||||||  ||| ||| ||| |||||| ||||||| | ||||| ||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||| |||    
T  24153215 catcttaaatattcaattatacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataatta 24153116  T
Q  203 a 203  Q
    |    
T  24153115 a 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 16796685 - 16796875
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 225  Q
    |||||||||||||||| ||||||| ||| |||||||||| ||||||| ||||||  || ||||||| |||||| ||| |||| |  | |||||||||| |    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc 16796784  T
Q  226 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 316  Q
    ||||||| |||||||||||  || | |||||| |||||||||||||| ||  ||||| |||||||||||  ||||||||||||||||||||    
T  16796785 tacccaaaggttcaactcttaacaattcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagag 16796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 276
Target Start/End: Original strand, 42386428 - 42386699
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatcaacat 106  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||| |||||||| | ||| ||| ||||||    
T  42386428 acttagaccgactcatgcagtttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacat 42386527  T
Q  107 cttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagattatagttaac 204  Q
    || |  ||| ||   ||  |||||| |||||||| ||||||||| ||| |||||||||||| ||| | ||||| |  ||||||||||||||||  |||||    
T  42386528 ctcaaatattcattcataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaac 42386627  T
Q  205 ctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 276  Q
     ||||   ||||||  ||| |||||| | |||||||||| | || | ||||||||||||| |||||||||||    
T  42386628 atcataaacaagtcccaatactaccccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcc 42386699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 320
Target Start/End: Original strand, 30029855 - 30030171
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||  ||||||| || ||||||| |||||||| |||| ||||| |||   ||||  |||| ||||||||| ||||||| || ||||||| |||    
T  30029855 tcaacttagactgactcatgcaacttagtttaataacaatagcagcatagacagattacaacaacagcatgacataagaatatcatttgcaattca-caa 30029953  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtta 202  Q
    | |||||  ||| |||  |  |||||||||||| | | ||||||||| ||| ||||||||||   ||| | ||||||  |||||||||| |||||| | |    
T  30029954 cgtcttaaatattcaataaaacttcaagtaatgtacacaacattatatcacatcataatcaatgtcaaaacatcttaaacagcttcacatattatattaa 30030053  T
Q  203 acctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg-tca 301  Q
    || ||||  | |||||||||  |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||||| || |||| |||| || | |    
T  30030054 acatcatcattaagtcttaaagctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcattctg-ttctgggatta 30030152  T
Q  302 ctcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||    
T  30030153 ctcgcgaggcgagagcctc 30030171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 9707758 - 9707622
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  9707758 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatacaagtcaaca 9707660  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  9707659 acgtctcaattattcacatataattcaagtaatgcata 9707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 29172734 - 29172598
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  29172734 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 29172636  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  29172635 acgtctcaattattcacatataattcaagtaatgcata 29172598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 856150 - 856348
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgac-ataataatatcaatttcaattcatcaa 103  Q
    |||| |||| |||||||||| || ||||||| |||||||| ||||||||||||||   ||||  |  || |  ||||| ||| ||||| ||||||| |||    
T  856150 atcatcttatatcgactcatgcaacttagttgaataacaatagcaacataggcagattacaacaacaatcatgataattataccaatt-caattcaacaa 856248  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    |||||||||||||||| || |||||||||||| |||||||||||||| || ||||| || |||  ||||| || || | |||||||||||||  ||||||    
T  856249 catcttatgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcata-taagcttcacagattgcagttaa 856347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 36166609 - 36166712
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| | |||||| || |||||| |||||||||||||||||| | ||| ||| |||    
T  36166609 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaa 36166707  T
Q  104 catct 108  Q
    |||||    
T  36166708 catct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 17672637 - 17672722
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||| ||  |||||| ||||||||||||||||||    
T  17672637 atcaacttagaccgactcatgcagcttagttaaataacaacaacaacata-gcagtatacaaaaacagcatgacataataatatcaa 17672722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 7781498 - 7781362
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  7781498 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 7781400  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  7781399 acgtctcaattattcacatataattcaagtaatgcata 7781362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 10247874 - 10247738
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  10247874 atcaacttagaccgactcatacagcttagttaaataacaacagcagcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 10247776  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  10247775 acgtctcaattattcacatataattcaagtaatgcata 10247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 14179570 - 14179648
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaac 204  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 14179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 17463189 - 17463325
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  17463189 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 17463287  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  17463288 acgtctcaattattcacatataattcaagtaatgcata 17463325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 28848762 - 28848626
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  28848762 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 28848664  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  28848663 acgtctcaattattcacatataattcaagtaatgcata 28848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 34159337 - 34159473
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  34159337 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 34159435  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  34159436 acgtctcaattattcacatataattcaagtaatgcata 34159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 38962042 - 38961906
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  38962042 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 38961944  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  38961943 acgtctcaattattcacatataattcaagtaatgcata 38961906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 45607058 - 45606922
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  45607058 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 45606960  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  45606959 acgtctcaattattcacatataattcaagtaatgcata 45606922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 55476502 - 55476638
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  55476502 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 55476600  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  55476601 acgtctcaattattcacatataattcaagtaatgcata 55476638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 21618460 - 21618563
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| || |||||| |||||||||||||||||| | ||| ||| |||    
T  21618460 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaa 21618558  T
Q  104 catct 108  Q
    |||||    
T  21618559 catct 21618563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 55500953 - 55501055
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  55500953 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 55501051  T
Q  103 acat 106  Q
    ||||    
T  55501052 acat 55501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 6469285 - 6469200
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  6469285 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6469200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 12174368 - 12174309
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  12174368 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 12174309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 32307689 - 32307748
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  32307689 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 32307748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 44494820 - 44494905
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| ||  |||||| || |||||||||||||||    
T  44494820 atcaacttagatcgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaaacagcataacataataatatcaa 44494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 8899105 - 8899241
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  8899105 atcaatttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 8899203  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  8899204 acgtctcaattattcacatataattcaagtaatgcata 8899241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12567571 - 12567707
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| || ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  12567571 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaaca 12567669  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  12567670 acgtctcaattattcacatataattcaagtaatgcata 12567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 13544036 - 13544172
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| || ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  13544036 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaaca 13544134  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  13544135 acgtctcaattattcacatataattcaagtaatgcata 13544172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 16454432 - 16454296
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  16454432 atcaacttagaccgactcatgcaacttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 16454334  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  16454333 acgtctcaattattcacatataattcaagtaatgcata 16454296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 17446805 - 17446670
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  17446805 atcaacttaga-cgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 17446708  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  17446707 acgtctcaattattcacatatcattcaagtaatgcata 17446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 50242833 - 50242969
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | | |||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  50242833 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaaatgcaaatcaaca 50242931  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  50242932 acgtctcaattattcacatataattcaagtaatgcata 50242969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 15470939 - 15470995
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagta 61  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  15470939 tcaacttagaccgactcatgcagcttagttaaataacagacagcaacataggcagta 15470995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 16282962 - 16282880
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatat 86  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||    
T  16282962 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatat 16282880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 12119876 - 12119791
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| |||||| |||||||||||||||| ||| | |||||| ||  |||||| ||||||||||||||||||    
T  12119876 atcaacttagaccgactcatgcagctttgttaaataacaacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 12119791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 13151942 - 13151805
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  13151942 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 13151844  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  13151843 aacgtctcaattattcacatataattcaagtaatgcata 13151805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 13154407 - 13154270
Alignment:
Q  5 atcaacttagatcgactcatacagctt-agttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| |    
T  13154407 atcaacttagaccgactcatgcagctttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaac 13154309  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||| ||| |  ||| || ||||  |||||||||||||||    
T  13154308 aacgtctcaattattcacatataattcaagtaatgcata 13154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 15412440 - 15412525
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| | | |||| ||  |||||| ||||||||||||||||||    
T  15412440 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-gtagtatacaaaaacagcatgacataataatatcaa 15412525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 15977526 - 15977573
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15977526 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 15977573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 16103792 - 16103851
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  16103792 tcatcaacttagaccgactcatgcagcttagttaaacaacgaacagcaacataggcagta 16103851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 17737247 - 17737294
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  17737247 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 17737294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 49668185 - 49668126
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  49668185 tcatcatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 49668126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13210438 - 13210377
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||    
T  13210438 cttcaacaacttagaccgactcatgcagcttagttaaataacaaatagcaacataggcagta 13210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 53070799 - 53070668
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| |||||||||||||||||||||||||||||  ||||| ||  |||||  | |||||||||||||||| | ||| ||| |||| ||    
T  53070799 cttagaccgactcatgcagcttagttaaataacaacagcaacata-acagtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaacgtc 53070701  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata 140  Q
    | |  ||| || ||||  |||||||||||||||    
T  53070700 tcaattattcacatataattcaagtaatgcata 53070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 53301658 - 53301601
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  53301658 atcaacttagaccgactcatacaacttagttaaataacaaacagcaacatagacagta 53301601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 16097340 - 16097396
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggca 58  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||    
T  16097340 tcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 46822279 - 46822386
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| |||| |||||||||  || |  ||||  | ||||||| |||||||||| ||||||| ||    
T  46822279 atcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaaca 46822378  T
Q  103 acatctta 110  Q
    ||||||||    
T  46822379 acatctta 46822386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 8499529 - 8499572
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  8499529 atcaacttagaccgactcatgcagcttagttaaataacaacagc 8499572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 9512932 - 9512991
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  9512932 tcatcatcttagaccgactcatgcagcttagttaaacaacaaacagcaacataggcagta 9512991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 9520907 - 9520966
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  9520907 tcatcatcttagaccgactcatgcagcttagttaaacaacaaacagcaacataggcagta 9520966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10556996 - 10557039
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  10556996 atcaacttagaccgactcatgcagcttagttaaataacaacagc 10557039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 12511071 - 12511177
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| |||| |||||||||  || |  ||||  | ||||||| |||||||||| ||||||| ||    
T  12511071 atcaacttagaatgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaaca 12511170  T
Q  103 acatctt 109  Q
    |||||||    
T  12511171 acatctt 12511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 28194704 - 28194755
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacatag 55  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  28194704 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 43550625 - 43550544
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagta--aacaaacagtatgacataataatatcaa 89  Q
    |||||| |||||||| ||||||||||||||||  ||||||||||| ||||||   | |||||  ||||||||||||||||||    
T  43550625 cttagaccgactcatgcagcttagttaaataatgacagcaacatatgcagtatgcaaaaacaacatgacataataatatcaa 43550544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 45577989 - 45577947
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacag 47  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  45577989 atcaacttagaccgactcatgcagcttagttaaataacaacag 45577947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 14234501 - 14234558
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||||||  || |||| ||||||||||||||||||| |||||||||||||||||    
T  14234501 atcaacttagactgattcatgcagcttagttaaataacaagcagcaacataggcagta 14234558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 17248161 - 17248074
Alignment:
Q  234 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||| ||||||| |||| ||||||||||||| ||||||||| |  |||||| || |||||  || ||||||||||||||||||||||||    
T  17248161 ggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctc 17248074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 27165261 - 27165318
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||||    
T  27165261 atcaacttagaccgactcatgcagcttagttaaataacaaacagcaatatagacagta 27165318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 41123901 - 41123942
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaaca 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  41123901 atcaacttagaccgactcatgcagcttagttaaataacaaca 41123942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 52523831 - 52523779
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  52523831 cttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 52523779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 53070582 - 53070531
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 276  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||    
T  53070582 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 53070531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 1644782 - 1644724
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    ||||||||||||| | ||| ||   ||||||||||||||||||| ||||||||||||||    
T  1644782 tcatcaacttagaccaacttatgttgcttagttaaataacaacaacaacataggcagta 1644724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 23077584 - 23077530
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    |||| |||| || ||||||| || ||| |||||||||||||||||||||||||||    
T  23077584 atcatcttatatagactcatgcaacttggttaaataacaacagcaacataggcag 23077530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 13919350 - 13919399
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    |||| |||||||| ||||||||||||  ||||||||||||||||| ||||    
T  13919350 tagaccgactcatgcagcttagttaataaacaacagcaacatagggagta 13919399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 12377940 - 12377992
Alignment:
Q  10 cttagatcgactcatacagcttagttaa-ataacaacagcaacataggcagta 61  Q
    |||||| ||||||||||||||||||||| | |  |||||||||||||||||||    
T  12377940 cttagaccgactcatacagcttagttaatagacaaacagcaacataggcagta 12377992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 22110454 - 22110402
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  22110454 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 22110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 43925977 - 43926029
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  43925977 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 43926029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 320
Target Start/End: Complemental strand, 38801483 - 38801180
Alignment:
Q  17 cgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtat 115  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||   ||| ||| | |||||||| ||||||| |||||||||||||||| |||| |||    
T  38801483 cgactcatgcagcttagttaaataacaaacagcaacataggcagtgtgcaa-cagcaagacataattatatcaaattcaattcatcaacatattatatat 38801385  T
Q  116 acaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaa 215  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||    
T  38801384 acaattattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaa 38801285  T
Q  216 gtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgaga 315  Q
    |||||||| ||||||||||||||||||  |||| | |||| | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38801284 gtcttaatcctacccaagggttcaacttccgacaactcgtacaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcgaga 38801185  T
Q  316 gcctc 320  Q
    |||||    
T  38801184 gcctc 38801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 27250840 - 27250518
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  27250840 cttcaacaacttagaccgactcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 27250741  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||    
T  27250740 atcaacatcttaaatattcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattat 27250641  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | |||||||| |  | |||| | ||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||  ||||||  |||||||||||      
T  27250640 aattaacctcttcattaagtatcaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatataacaagggactctgtttctgt 27250541  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  27250540 gtcactcgcgaggcgagagcctc 27250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 50210324 - 50210001
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||  |||||||||||||||||| | ||| ||    
T  50210324 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtc 50210225  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||| | |||||||   ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||    
T  50210224 aacaacatctcaagtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattat 50210125  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||||| |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  50210124 aattaacatcatcattaagtctcaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 50210025  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  50210024 ggtcactcgcgaggcgagagcctc 50210001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 320
Target Start/End: Original strand, 21026696 - 21027012
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaac 104  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||  ||| ||||| |||  ||||||||| ||||||| ||||    
T  21026696 caacttagaccgactcatgcagcttagttaaataacaacagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaac 21026795  T
Q  105 atcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    ||||||  ||| |||||| |  |||||||||||||||| ||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||||| ||||    
T  21026796 atcttaaatattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaa 21026895  T
Q  204 cctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcact 303  Q
    |||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||    
T  21026896 cctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgggtcact 21026995  T
Q  304 cgcgaggcgagagcctc 320  Q
    |||||||||||||||||    
T  21026996 cgcgaggcgagagcctc 21027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 66 - 320
Target Start/End: Complemental strand, 22354616 - 22354361
Alignment:
Q  66 aacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa 164  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  165 caacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaag 264  Q
    || ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||||||| ||||| || ||||||| |||| || | |||||| ||||||    
T  22354516 catcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctcaacaactcgtgcaacaaag 22354417  T
Q  265 gtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||    
T  22354416 gtcgcaaaacctaacaagtcactctgtttctgggtcacttgcgaggcgagagcctc 22354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 22532279 - 22532602
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| | |||||| ||  |||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||||||    
T  22532279 cttcatcaacttagaccaactcatgcaatttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattc 22532378  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| ||   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||| | ||    
T  22532379 aacaacatcttaaatattcattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcat 22532478  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    |  |||| ||||  | |||||| ||| |||||  | |||||||||||| ||   |||||| |||||||||||||||||| ||||||||||||||||| |     
T  22532479 aaataacatcatcattaagtctcaatactacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttg 22532578  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  22532579 ggtcactcgcgaggcgagagcctc 22532602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 34509790 - 34510113
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||| ||||||| | ||| ||    
T  34509790 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtc 34509889  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||||||   ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||| |||||||    
T  34509890 aacaacatcttaattatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattat 34509989  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||| | ||||||||||||     
T  34509990 aattaacatcatcattaagtctcaatactaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaaaacctaacatgacactctgtttctg 34510089  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||| ||||||||||||||    
T  34510090 ggtcactcgtgaggcgagagcctc 34510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 317
Target Start/End: Original strand, 20135201 - 20135517
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||| ||||| |||| |||||||||   ||||  |||  |||||||||||||||||  | ||||||| ||    
T  20135201 atcaacttagactgactcatgcaacttagttaaacaacaatagcagcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaaca 20135300  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    |||||||| |||| |||  |  |||||||||||||||| ||||||||| ||  ||||||| |||| ||||| ||||||  ||||||||||||||||| ||    
T  20135301 acatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataatt 20135400  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtc 300  Q
    |||  |||  | | |||||| | |||||| | |||||||||||| || | |||| | |||||||||||| ||| | ||||||||||||||||||| |||     
T  20135401 aacaacatcattaggtcttactactaccctaaggttcaactctcaacaactcgtacaacaaaggtcgcataaacctaacaagtcactctgtttctgggtt 20135500  T
Q  301 actcgcgaggcgagagc 317  Q
    |||||||||| ||||||    
T  20135501 actcgcgaggtgagagc 20135517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 100 - 313
Target Start/End: Complemental strand, 22356185 - 22355969
Alignment:
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagattat 197  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   |||||||||||||||    
T  22356185 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22356086  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctc 296  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| ||||||||||||||     
T  22356085 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttcta 22355986  T
Q  297 ggtcactcgcgaggcga 313  Q
    |||||||||||| ||||    
T  22355985 ggtcactcgcgatgcga 22355969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 100 - 313
Target Start/End: Complemental strand, 22357871 - 22357655
Alignment:
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagattat 197  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   |||||||||||||||    
T  22357871 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22357772  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctc 296  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| ||||||||||||||     
T  22357771 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttcta 22357672  T
Q  297 ggtcactcgcgaggcga 313  Q
    |||||||||||| ||||    
T  22357671 ggtcactcgcgatgcga 22357655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 20847146 - 20847008
Alignment:
Q  182 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 281  Q
    |||||||| ||||||| ||||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| |||||    
T  20847146 cagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaa 20847047  T
Q  282 gtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  20847046 gtcactctgtttctgggtcactcgcgaggcaagagcctc 20847008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 22468803 - 22468608
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag--taaacaaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| || |||||||||||||||| ||||||||||||||  || |  ||||| ||||||| |||||||||||| ||||||| ||    
T  22468803 atcaacttagactgactcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaaca 22468704  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||||  ||| |||  ||   |||||||||||| | ||||||||| ||| |||||||  ||| || || ||||||  |||||||||||||||||    
T  22468703 acatcttaattattcaataatatctcaagtaatgcacataacattatatcacatcataat-tacatcagcacatcttaaacagcttcacagattata 22468608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20847265 - 20847175
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaa 89  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||  |||||||    
T  20847265 cttcaacaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtacacaaaatcagcatgacataaatatatcaa 20847175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 33797570 - 33797694
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgca 138  Q
    ||||||||||||||| |||| | |||||||  |||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||    
T  33797570 aacaacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgca 33797668  T
Q  139 t-aaacattataacacttcataatca 163  Q
    | |||||||||| ||| | |||||||    
T  33797669 taaaacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 13988877 - 13989013
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  13988877 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 13988975  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  13988976 acgtctcaattattcacatataattcaagtaatgcata 13989013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 20454660 - 20454606
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  20454660 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcag 20454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 21923442 - 21923306
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  21923442 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 21923344  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  21923343 acgtctcaattattcacatataattcaagtaatgcata 21923306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23593886 - 23593750
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  23593886 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 23593788  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  23593787 acgtctcaattattcacatataattcaagtaatgcata 23593750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 31612324 - 31612460
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  31612324 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-atagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 31612422  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    |||||| |  ||| || ||||  |||||||||||||||    
T  31612423 acatctcagttattcacatataattcaagtaatgcata 31612460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 45574989 - 45574912
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagta--aacaaacagtatgacataataata 85  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||   | |||||| ||||||||||||||    
T  45574989 cttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataata 45574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 48603652 - 48603730
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaac 204  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 48603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 16275515 - 16275428
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatt 91  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | ||||| |||||| ||  |||||| ||||||||||||||||||||    
T  16275515 atcaacttagaccgactcatacaacttagttaaataacaacaacgacata-gcagtatacaaaaacagcatgacataataatatcaatt 16275428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 21840778 - 21840863
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  ||||||||||||||||||    
T  21840778 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 21840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 21475238 - 21475102
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  21475238 atcaacttagaccaactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 21475140  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  21475139 acgtctcaattattcacatataattcaagtaatgcata 21475102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 21754057 - 21754116
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  21754057 tcatcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 21754116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 29298148 - 29298195
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29298148 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 29298195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 29776699 - 29776746
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29776699 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 29776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 433023 - 433157
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||||||||||||    |||||| |||||||| |||||  ||  | |||||||||||||||| | ||| ||| ||    
T  433023 atcaacttagaccgactcatgcagcttagttaaataacg---gcaacacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaaca 433119  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    |||||| |  ||| || ||||  |||||||||||||||    
T  433120 acatctcaattattcacatataattcaagtaatgcata 433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 16758664 - 16758720
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| || |||||||||||||| |||||||||||||||||||    
T  16758664 tcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagta 16758720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 21896358 - 21896258
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| || |||||||||  ||||| ||||||||||||||||| || |||||| |||| |||| |||||||| | ||| |||||||||||    
T  21896358 cttagaccgactcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 21896259  T
Q  108 t 108  Q
    |    
T  21896258 t 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 33681022 - 33681078
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| || |||||||||||||| |||||||||||||||||||    
T  33681022 tcaacttagaccgactcatgcaacttagttaaataacaaacagcaacataggcagta 33681078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 13213013 - 13212970
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  13213013 atcaacttagaccgactcatgcagcttagttaaataacaacagc 13212970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 16361928 - 16361975
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  16361928 atcaacttagaccgactcatgcagcttagttaaataacgacagcaaca 16361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20918620 - 20918675
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||    
T  20918620 caacttagaccgactcatgcagcttagttaaataacaaactgcaacataggcagta 20918675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 21707178 - 21707225
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  21707178 atcaacttagaccgactcatgcagcttagttaaataacaacaacaaca 21707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 21711720 - 21711767
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  21711720 atcaacttagaccgactcatgcagcttagttaaataacaacaacaaca 21711767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 22921978 - 22921919
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  22921978 tcatcatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 22921919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 433244 - 433340
Alignment:
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || | ||   || ||||||||||||||||||||||||    
T  433244 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttgcaactgggtcactcgcgaggcgagagcctc 433340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 21714556 - 21714610
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||| |||||||||    
T  21714556 atcaacttagaccgactcatgcagcttggttaaataacaatagcagcataggcag 21714610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 21342107 - 21342148
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaaca 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  21342107 atcaacttagaccgactcatgcagcttagttaaataacaaca 21342148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 21346972 - 21347013
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaaca 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  21346972 atcaacttagaccgactcatgcagcttagttaaataacaaca 21347013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 15860160 - 15860078
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatat 86  Q
    |||||||| || |||||||| ||||||||||||||||||||||| ||| | |||||| ||  |||||  |||||||||||||||    
T  15860160 atcaacttggaccgactcatgcagcttagttaaataacaacagcgacaca-gcagtatacaaaaacaacatgacataataatat 15860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 21861672 - 21861572
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| |||||||| |||  ||||| |||||||||||||||||  |||| ||| |||| |||| |||||||| | ||| |||||||||||    
T  21861672 cttagaccgactcatgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 21861573  T
Q  108 t 108  Q
    |    
T  21861572 t 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 52928076 - 52928020
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||||    
T  52928076 tcaacttagaccgactcatgcagcttagttaaataacaaacaacaacatagacagta 52928020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 14295652 - 14295601
Alignment:
Q  11 ttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  14295652 ttagaccgactcatgcagcttagttaaataacaaacagcaacataggtagta 14295601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 20248291 - 20248350
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| || |||||||||| ||| |||| ||||||||||||||    
T  20248291 tcatcaacttagaccgactcatgcaacttagttaaaaaacaaacaacaacataggcagta 20248350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 22237642 - 22237695
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggca 58  Q
    |||||||||| ||||||||  |||||||||||||||| |||||| |||||||||    
T  22237642 tcaacttagaccgactcatgaagcttagttaaataacaaacagcgacataggca 22237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 35261180 - 35261099
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagtatgacataataatatcaa 89  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||  | |||||| |||| |||| ||||||||    
T  35261180 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaa 35261099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 50614219 - 50614167
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  50614219 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50614167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 50622047 - 50621995
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  50622047 cttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 50621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 1159 - 838
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaaca--gtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||| |  | |||||||||||||||||||| ||||||    
T  1159 cttcaacaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattc 1060  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| ||||||||    
T  1059 atcaacatcttaaatattcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattata 960  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  959 attaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctggg 860  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  859 tcactcgcgaggcgagagcctc 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 183; Significance: 5e-99; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 168089 - 167768
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaaca--gtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||| |  | |||||||||||||||||||| ||||||    
T  168089 cttcaacaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattc 167990  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| ||||||||    
T  167989 atcaacatcttaaatattcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattata 167890  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  167889 attaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctggg 167790  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  167789 tcactcgcgaggcgagagcctc 167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 51923 - 52244
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||  |||||| |||||||||||||||||||| ||| ||    
T  51923 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtc 52022  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || |||||||  ||| ||| ||| |||||||||||||| | ||||||||| |||  ||||||| ||| ||||| ||||||  ||||||||||||||||    
T  52023 aacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattat 52122  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | |||||||||| |||||| | |||||||||||| || | |||||| || |||||||||||| | |||||| ||||| |||||| |    
T  52123 aattaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaac-aaggtcgcaaaacctaacaagacactcagtttctgg 52221  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  52222 gtcactcgcgaggcgagagcctc 52244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 176; Significance: 8e-95; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 4722 - 5044
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||||  | ||||||| ||||||    
T  4722 cttcaacaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattc 4821  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||    
T  4822 atcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattata 4921  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgc-aaaatccaacaagtcactctgtttctcg 297  Q
     ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| || |||||| |||||||||||||  || | |    
T  4922 cttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaaatctaacaagtcactcttattatgg 5021  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||| ||||||||||||||||    
T  5022 gtcacttgcgaggcgagagcctc 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 320
Target Start/End: Original strand, 12 - 268
Alignment:
Q  65 aaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaa 164  Q
    |||||| |||||||||  | ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  12 aaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaa 111  T
Q  165 caacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaag 264  Q
    |||||||||||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| ||||||    
T  112 caacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaag 211  T
Q  265 gtcgc-aaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    || || |||||| |||||||||||||  || | ||||||| ||||||||||||||||    
T  212 gttgcaaaaatctaacaagtcactcttattatgggtcacttgcgaggcgagagcctc 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 5239 - 4920
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||||| || ||||||||| | || |||| ||  |||||||||| ||||||| |||||||||    
T  5239 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacatcaacataggtattatacaa-catcatgacataattatatcaaattcaattca 5141  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||||||| |||||| ||||||     
T  5140 tcaacatcttatgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataa 5041  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
    ||||||| ||| | || ||||||| |||||||||||||||||||||||| | |||||| ||||||||| |||||||||| ||||||||||||||||  ||    
T  5040 ttaaccttattattaaatcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtctcaaaatccaataagtcactctgtttctgtgt 4941  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||| ||||    
T  4940 cactcgcgaggcgagatcctc 4920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 13221 - 13543
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  13221 cttcatcaacttagactgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 13320  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| |||||    
T  13321 atcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattat 13420  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | |||||||||| ||| || | ||||||||| ||||| | |||||| ||||||||||||||||| |||||| ||||||| |||| |    
T  13421 aattaacatcatcattaagtcttaatgctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgattctag 13520  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  13521 gtcactcgcgaggcgagagcctc 13543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 166; Significance: 8e-89; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 47005 - 47318
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| ||||||||  |||||||||||||||||| || |||||||||||||  |||  ||| ||||||||||||||||||||||||||||    
T  47005 cttcaacatcttagaccgactcatgtagcttagttaaataacaaacaacaacataggcagtttacag-cagcatgacataataatatcaatttcaattca 47103  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatag 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| || |||||||||||||||| |||||||||||||||||     
T  47104 tcaacatcttatgtatacaaatattctccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagattata- 47202  T
Q  200 ttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggt 299  Q
         |||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||| |  || |||||||||||||| || | |||    
T  47203 -----ctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgccatttctaacaagtcactctggttttgggt 47297  T
Q  300 cactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||    
T  47298 cactcgcgaggcgagagcctc 47318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 1962 - 2284
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| || |||||| |||||||| |||||||||||| |||||||||| |||||||||||| |||||  ||  |||||||||| ||||||||| ||||||    
T  1962 cttcaacatcttagaccgactcatgcagcttagttaattaacaacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattc 2061  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||  ||| |||| ||| ||||||||||||||||| ||||||| | | |||||||||||||||||||||| ||| |||||| ||| |||||    
T  2062 aacaacatcttaaatattcaaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatattat 2161  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
       |||||| ||  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||| |||||||||||||| |    
T  2162 taataaccttatcattaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttctag 2261  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  2262 gtcactcgcgaggcgagagcctc 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 3480 - 3802
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| ||||||||  |||||||||||||||| | |||||||||||||||| |||||  ||| |||||||||||||||||||| ||||||    
T  3480 cttcatcaacttagaccgactcatgtagcttagttaaataactaaagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc 3579  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| |||||||    
T  3580 atcaacatcttaaatattcaaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattat 3679  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| |||||| |  |||||| |||| || | |||||| ||||||||||||||| | ||||| ||||||||||| | |    
T  3680 aattaacatcctcattaagtcttaatactaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaactcactctgtttttgg 3779  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  3780 gtcactcgcgaggcgagagcctc 3802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 320
Target Start/End: Original strand, 361 - 675
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    ||||||| |||||||| |||||||||||||||||||||  ||||||||||||| || ||| || ||||| ||||||||||||||  || ||| |||||||    
T  361 acttagaccgactcatgcagcttagttaaataacaacaataacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatc 460  T
Q  108 ttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacct 206  Q
    |||  ||| | | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| | |||||| ||||| |    
T  461 ttaaatattcgattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacat 560  T
Q  207 cattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcg 305  Q
    | |  | |||||| ||| |||||| | |||||||||||| || | || ||| |||||||| |||||| || |||||| |||||||||||| |||||||||    
T  561 cctcattaagtctcaatactaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaacctaacaagacactctgtttctgggtcactcg 660  T
Q  306 cgaggcgagagcctc 320  Q
    |||||||||||||||    
T  661 cgaggcgagagcctc 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 1861 - 2183
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||  ||  |||||||||||||||||||| ||||||    
T  1861 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattc 1960  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    ||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   |||||||||||||||    
T  1961 atcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattat 2060  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| |||||| ||||||||||   |    
T  2061 aattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagg 2160  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||| ||||||| ||||||    
T  2161 gtcactcgtgaggcgatagcctc 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 320
Target Start/End: Complemental strand, 24406 - 24090
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa---cagtatgacataataatatcaatttcaattcatcaaca 105  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||   ||| ||||||||| |||||||||| |||||||||||||    
T  24406 acttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaaca 24307  T
Q  106 tcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataat-caacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    |||||  ||| |||||||||||||||||||||| | ||||||||| ||| ||||||| ||||| ||||| ||||||  ||||||||||||||||| ||||    
T  24306 tcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaa 24207  T
Q  204 cctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcact 303  Q
    | || |    |||||||||| ||| || |  |||||||||||||| | |||||| ||||||||||||||||| |||||| |||| ||||||| |||||||    
T  24206 catcctcaataagtcttaatactatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactttgtttctaggtcact 24107  T
Q  304 cgcgaggcgagagcctc 320  Q
    |||||||||||||||||    
T  24106 cgcgaggcgagagcctc 24090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 143; Significance: 4e-75; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 38771 - 39093
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| ||| |||| ||||||| ||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||| | ||| | |    
T  38771 cttcatcaacttagaccgagtcatgcagcttaattaaataacaatagcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataa 38870  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  38871 acaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 38970  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||||||| ||||||| |    
T  38971 attaacatcatcattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactatgtttctgg 39070  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  39071 gtcactcgcgaggcgagagcctc 39093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 32952 - 33151
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||| ||||| |||||||| ||||||| ||||||||||| |||||||||||||||| || |||||| |||||||||||||||||| | ||| | |    
T  32952 cttcatcaagttagaccgactcatgcagcttaattaaataacaatagcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtta 33051  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     ||||||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  33052 acaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 33151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 9760 - 9845
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  9760 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagaatgacataataatatcaa 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 6235 - 5910
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaaca---taggcagtaaacaaa--cagtatgacataataatatcaatttcaa 95  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||   |||| |||| |||||  ||| ||||||| |||||||||||| |||    
T  6235 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaa 6136  T
Q  96 ttcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagat 194  Q
    |||||||||||||||  ||| |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||  |    
T  6135 ttcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattt 6036  T
Q  195 tatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttc 294  Q
    |||| ||||| ||||  | |||||||||| ||| || | ||||| ||||||||  | |||||| ||||||||||||||||| |||||| |||||||||||    
T  6035 tataattaacatcatcattaagtcttaatgctatcccaaggttccactctcgataactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttc 5936  T
Q  295 tcggtcactcgcgaggcgagagcctc 320  Q
    | |||||||  |||||||||||||||    
T  5935 tgggtcactaacgaggcgagagcctc 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 4859 - 5180
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||| | ||||||    
T  4859 cttcaacaacttagaccgactcatgcagattagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattc 4958  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||||||||| |||| |||||| |  ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||    
T  4959 aacaacatcttaagtattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattat 5058  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    || ||||| | |  | |||||||| | ||| |||| |||| ||  ||| || | |||||| |||||||| |||||| | ||||||||||||||||||| |    
T  5059 agctaaccccttcattaagtcttattgctagccaaaggtttaatcctcaacaactcgtgcaacaaaggtggcaaaa-ctaacaagtcactctgtttctag 5157  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||| ||||||||    
T  5158 gtcactcgcgaggcaagagcctc 5180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 26176 - 25853
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||| |  |||||    
T  26176 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattc 26077  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgc-ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | |||| ||| | |||||||   ||  ||||||||||||  | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| |||||||    
T  26076 aacaacgtctcaagtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattat 25977  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | |||||| ||||   | | |||||| |||||||||||||||||| |||||| ||||||||||||     
T  25976 aattaacatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctg 25877  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  25876 ggtcactcgcgaggcgagagcctc 25853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 44814 - 44709
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  44814 atcaacttagactgactcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 44715  T
Q  103 acatct 108  Q
    ||||||    
T  44714 acatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 319
Target Start/End: Complemental strand, 33463 - 33284
Alignment:
Q  141 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 240  Q
    ||||||||| ||| |||||||||||| ||||  ||||||  |||||||| || ||||| ||||| ||||  | |||||| ||| |||||| | |||||||    
T  33463 aacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaa 33364  T
Q  241 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 319  Q
    ||||  || | | ||  |||| || |||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||    
T  33363 ctcttaacaacttgtatgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcacacgcgaggcgagagcct 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 320
Target Start/End: Original strand, 20928 - 21243
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaaca 105  Q
    ||||||| ||||||||| ||||||||||| |||||| |||||||||||||| ||  ||||  ||  |||||||||||||||||||| ||||||| |||||    
T  20928 acttagaccgactcataaagcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaaca 21027  T
Q  106 tcttatgtatacaaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaac 204  Q
    |||||| ||| ||||| |||| |||||||||||| |||||||||| ||| ||||||||| || ||||| ||||||  ||||||||||| ||||| |||||    
T  21028 tcttatatattcaaatgttctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaac 21127  T
Q  205 ctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactc 304  Q
     || |  | |||||||||| |||||||| |||||||||||   | | |||||| |||||||||||||||  |||||||||||||||||| | ||||||||    
T  21128 atcttcattaagtcttaatactacccaaaggttcaactctgatcaactcgtgcaacaaaggtcgcaaaactcaacaagtcactctgtttttgggtcactc 21227  T
Q  305 gcgaggcgagagcctc 320  Q
     |||||||||||||||    
T  21228 acgaggcgagagcctc 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 39487 - 39809
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||| | ||| |||    
T  39487 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtca 39586  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||||    
T  39587 acaacatctcaaatatacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattata 39686  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||| | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || |||||||||||  ||||| |||||||||||| |    
T  39687 attaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgg 39786  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  39787 gtcactcgcgaggcgagagcctc 39809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 75325 - 75003
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||| | ||| |||    
T  75325 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtca 75226  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||||    
T  75225 acaacatctcaaatatacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattata 75126  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||| | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || |||||||||||  ||||| |||||||||||| |    
T  75125 attaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgg 75026  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  75025 gtcactcgcgaggcgagagcctc 75003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 320
Target Start/End: Original strand, 22897 - 23215
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  22897 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-ccagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 22995  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagtt 201  Q
    ||||||||  ||| ||| ||| |||||||||||||| | ||||||||| ||| || ||||||||| ||||| ||||||  |||||||||||||||||  |    
T  22996 acatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaat 23095  T
Q  202 aacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtc 300  Q
    ||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| ||||    
T  23096 aacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtc 23195  T
Q  301 actcgcgaggcgagagcctc 320  Q
    |||||||||||||| |||||    
T  23196 actcgcgaggcgagggcctc 23215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 17328 - 17003
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagt----aaacaaacagtatgacataataatatcaatttcaat 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    ||| |||||| |||||||||||||||||| | |||     
T  17328 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaag 17229  T
Q  97 tcatcaacatcttatgtatacaaatattcttcaagtaatgc-ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 195  Q
    ||| |||||||| | |||||||   ||  ||||||||||||  | ||||||||| ||| |||||||||||| |||||  |||||  |||||| |||||||    
T  17228 tcaacaacatctcaagtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagatt 17129  T
Q  196 atagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttc 294  Q
    ||| ||||| ||||  | |||||| ||| |||||| | |||| ||||||| || | |||||| |||||||||||||||||| || |||  ||||||||||    
T  17128 ataattaacatcatgattaagtctcaatactaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttc 17029  T
Q  295 tcggtcactcgcgaggcgagagcctc 320  Q
    | ||||||||||||||||||||||||    
T  17028 tgggtcactcgcgaggcgagagcctc 17003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 79430 - 79388
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  79430 cttagaccgactcatgcagcttagttaaataacaacagcaaca 79388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 8489 - 8807
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||| |||| |||||  |||||||||||||||||||||||| ||| ||    
T  8489 cttcatcaacttagaccgactcatgcagcttggttaaataacaatagcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtc 8588  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | ||||||||||   || ||| | | |||||||||||||| | |||||||    || |||||||||||| ||||| ||| ||  |||||||||||||| |    
T  8589 aacaacatcttaaacattcaagtgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgt 8684  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
    | ||||| ||||  | |||||||||| |||| | | |||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |    
T  8685 aattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgg 8784  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||| ||||||||||||||||||    
T  8785 gtcattcgcgaggcgagagcctc 8807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 50 - 320
Target Start/End: Original strand, 6669 - 6942
Alignment:
Q  50 acataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaa-catt 146  Q
    |||||||||||| |||||  ||  |||||||||| ||||||||  ||||||| ||||||||||  ||| |||| ||| ||||||||||||||||| | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  147 ataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcg 246  Q
    ||| ||| |||||||||||||||||||||| ||| |||||| ||||||||||  |||||| ||  | || ||||||| |||||||| |||||||||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcg 6868  T
Q  247 acgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    || | |||||| ||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||    
T  6869 acaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttatgggtcactcgcgaggcgagagcctc 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 119; Significance: 9e-61; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 79 - 320
Target Start/End: Original strand, 124675 - 124917
Alignment:
Q  79 aataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatct 177  Q
    ||||||||||||| |||||||||||| | |||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||    
T  124675 aataatatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatct 124774  T
Q  178 tattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcca 277  Q
    ||  ||||||||||||||||| ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |    
T  124775 taaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatcta 124874  T
Q  278 acaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||    
T  124875 acaagacactctttttctgggtcactcgcgaggcgagagcctc 124917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 174776 - 174883
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||| || |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| || ||||||| |||||||||    
T  174776 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatac-aacagcatgacatgattatatcaaattcaattca 174874  T
Q  100 tcaacatct 108  Q
     ||||||||    
T  174875 acaacatct 174883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 121776 - 121835
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagt 60  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  121776 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagt 121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 8e-58; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 340058 - 339739
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    |||| |||||||||| |||||||| |||||||||||||||||| || |||||||||||||| ||||| ||  |||||||||||||||||| | ||| |||    
T  340058 cttcgtcaacttagaccgactcatgcagcttagttaaataaca-caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtca 339961  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| | |||||||   ||  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  339960 acaacatctcaagtatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 339861  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg 298  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||| ||  |||| |||||| ||||||||||||||| | |||||| |||||| ||||| ||    
T  339860 attaacgtcatcattaagtctcaatactaccccaaggttcaacccttaacgactcgtgcaacaaaggtcgcaaaacctaacaaggcactctatttctggg 339761  T
Q  299 tcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||    
T  339760 tcactcgcgaggcgagagcctc 339739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 71350 - 71474
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgca 138  Q
    |||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||    
T  71350 aacaacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgca 71448  T
Q  139 t-aaacattataacacttcataatca 163  Q
    | |||||||||| ||| | |||||||    
T  71449 taaaacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 158601 - 158465
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  158601 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 158503  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  158502 acgtctcaattattcacatataattcaagtaatgcata 158465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 8640 - 8321
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagta-aacaaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| ||||||||||||||   |||||||||||||||||||  | |||||| |||||||||||||||||||| ||| |||    
T  8640 cttcatcaacttagaccgactcatgcagcttagttaaat---aacagcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtca 8544  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     || |||||||  ||| ||| ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||||    
T  8543 acatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattata 8444  T
Q  199 gttaacctcattctcaagtcttaattcta-cccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcg 297  Q
     ||||| || |  | |||||  ||| ||| ||| |  ||||||||||| || | |||||| || |||||||||||| | |||||| |||||||||||| |    
T  8443 attaacatcctcattaagtcccaatactacccccaacgttcaactctcaacaactcgtgcaacgaaggtcgcaaaacctaacaagacactctgtttctgg 8344  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  8343 gtcactcgcgaggcgagagcctc 8321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 25906 - 26213
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagt-atgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||||   | |||||||||||||||||| | ||| | |    
T  25906 cttcatcaacttagaccgactcatgaagcttagttaaataacaatagcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaa 26005  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||| ||| ||| |||||||||||||||  ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||||    
T  26006 acaacatctcaaatattcaattatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattata 26105  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| || |  | |||||| ||| |||||| | |||||||||||| || |||||||| |||||||||||||||||| |||||| ||||  |||||| |    
T  26106 attaacatcctcattaagtctcaatgctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaacaaggcacttggtttctgg 26205  T
Q  298 gtcactcg 305  Q
    ||||||||    
T  26206 gtcactcg 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 39868 - 40189
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| | ||||||  |||||||||||||||||| |||||||||||||||| || ||| |  |||||||||||||||||| | ||| | |    
T  39868 cttcatcaacttagaccaactcatgaagcttagttaaataacaatagcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaa 39967  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgca-taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||| ||| ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||| ||||||    
T  39968 acaacatctcaaatattcaattatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattata 40067  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatc-caacaagtcactctgtttctcg 297  Q
     ||||| || |  | |||||| ||| |||||||| |||||||||||| || ||| |||| |||||||||||||||||  |||||| ||||| |||||| |    
T  40068 attaacatcctcattaagtctcaatgctacccaa-ggttcaactctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcactcggtttctag 40166  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||| |||||||||||||||||    
T  40167 gtcacccgcgaggcgagagcctc 40189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 39923 - 40245
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||| ||||| ||  |||||||||||||||||| | ||  |||    
T  39923 cttcatcaacttagaccaactcatgcagcttaattaaataacaatagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtca 40022  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
      |||||||||  |||   | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||| ||   ||||||||||||||||    
T  40023 ataacatcttaaatatttgattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattata 40122  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa-atccaacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||| | | ||||||  ||||||||||| |    
T  40123 attaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgg 40222  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||||||||||    
T  40223 gtcactcgcgaggcgagagcctc 40245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 3261 - 2987
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||| | ||| |||    
T  3261 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtca 3162  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  ||||||||||| |||||    
T  3161 acaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttata 3062  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 273  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| ||| |||||||||||    
T  3061 attaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaaa 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 837 - 801
Alignment:
Q  284 cactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||| ||||||||||||||||||||||||    
T  837 cactctgtttctgggtcactcgcgaggcgagagcctc 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 16711 - 16388
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| |  || ||    
T  16711 cttcatcaatttagaccgactcatgcagcttagttaaataacaacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtc 16612  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || ||||| | |||||||   ||  |||||||||||| || ||||||||| ||| ||| |||||||| ||||| ||||||  |||||||||||| |||    
T  16611 aacagcatctcaagtatacattcataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactat 16512  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaat-ccaacaagtcactctgtttctc 296  Q
    | ||||| ||||  | |||||| ||| |||||| | ||||||||||   || | | |||||||| || ||||||||| |||||||| |||||||||| |     
T  16511 aattaacatcatcattaagtctcaatactaccccaaggttcaactcctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttg 16412  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    ||||||||||||||||||||||||    
T  16411 ggtcactcgcgaggcgagagcctc 16388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 43 - 320
Target Start/End: Original strand, 13144 - 13424
Alignment:
Q  43 aacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||| ||| || |||||||  ||| ||| ||| |||||||||||||| |    
T  13144 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcaca 13243  T
Q  141 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttca 239  Q
     ||||||||| |||  ||||||||||| ||||| ||||||  ||| ||||||||||||| ||||| || |  | |||||  ||| |||||| |  |||||    
T  13244 taacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccccaaagttca 13343  T
Q  240 actctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||| || | |||||| ||||||||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||    
T  13344 actctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcctc 13424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34133 - 34199
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaa 66  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  34133 cttcaacaacttagaccgactcatacagcttagttaaataacaaacaacaacataggcagtatacaa 34199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 283 - 329
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacag 47  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  283 cttcatcaacttagaccgattcatgcagcttagttaaataacaacag 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 320
Target Start/End: Original strand, 4519 - 4840
Alignment:
Q  2 ttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattca 99  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||| | |||||| | |||  ||| |||||||||||||||||| | ||| |||    
T  4519 ttcatcaacttagaccgactcatgc-gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtca 4617  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  4618 acaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 4717  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |    
T  4718 attaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgg 4817  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||||||| |||||||||||    
T  4818 gtcactcgcgaagcgagagcctc 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 320
Target Start/End: Original strand, 12101 - 12422
Alignment:
Q  2 ttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattca 99  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||| | |||||| | |||  ||| |||||||||||||||||| | ||| |||    
T  12101 ttcatcaacttagaccgactcatgc-gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtca 12199  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  12200 acaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 12299  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |    
T  12300 attaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgg 12399  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||||||| |||||||||||    
T  12400 gtcactcgcgaagcgagagcctc 12422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 320
Target Start/End: Original strand, 22053 - 22374
Alignment:
Q  2 ttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattca 99  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||| | |||||| | |||  ||| |||||||||||||||||| | ||| |||    
T  22053 ttcatcaacttagaccgactcatgc-gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtca 22151  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattata 198  Q
     |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||||    
T  22152 acaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 22251  T
Q  199 gttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcg 297  Q
     ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |    
T  22252 attaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgg 22351  T
Q  298 gtcactcgcgaggcgagagcctc 320  Q
    ||||||||||| |||||||||||    
T  22352 gtcactcgcgaagcgagagcctc 22374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 85; Significance: 2e-40; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 33067 - 32747
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||| || |||||| |||||||||||||||||||| |||||||    
T  33067 cttcatcaacttagaccgactcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattca 32968  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacat-atcttattcagcttcacagattat 197  Q
     ||||||||||  ||| | | ||| |||| ||||||||||| ||||||||||||| |||| ||||||| || ||| ||   ||  |||||||||||||||    
T  32967 acaacatcttaaatattc-attatacttcgagtaatgcatataacattataacacatcatgatcaacatcagcatcataaaat--agcttcacagattat 32871  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    |  ||||  | |    |||| | ||| |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| |     
T  32870 aactaacaccttcaataagtttcaatactaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatg 32771  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||| |||||||    
T  32770 ggtcactcgcgaggcgggagcctc 32747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 45938 - 46258
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattca 99  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||||| || |||||| |||||||||||||||||||| |||||||    
T  45938 cttcatcaacttagaccgactcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattca 46037  T
Q  100 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacat-atcttattcagcttcacagattat 197  Q
     ||||||||||  ||| | | ||| |||| ||||||||||| ||||||||||||| |||| ||||||| || ||| ||   ||  |||||||||||||||    
T  46038 acaacatcttaaatattc-attatacttcgagtaatgcatataacattataacacatcatgatcaacatcagcatcataaaat--agcttcacagattat 46134  T
Q  198 agttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctc 296  Q
    |  ||||  | |    |||| | ||| |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| |     
T  46135 aactaacaccttcaataagtttcaatactaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatg 46234  T
Q  297 ggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||||||| |||||||    
T  46235 ggtcactcgcgaggcgggagcctc 46258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16123 - 16322
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||  |||||| | || || |||||||||| | |||  |    
T  16123 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaagcc 16222  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattat 197  Q
    | || ||||| | |||||||   ||   |||||||||||||| ||||||||| ||| |||| ||||||| |||||| | | |  ||||||||||||||||    
T  16223 aacatcatctcaagtatacattcataactcaagtaatgcatataacattatatcacgtcatgatcaacatcaacatct-taaaacagcttcacagattat 16321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17440 - 17389
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  17440 cttcatcaacttagaccgactcatgtagcttagttaaataacaacagcaaca 17389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 16333 - 16420
Alignment:
Q  234 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||||||| || | |||||| ||||||||||||||| || |||||| | |||||||||| ||||||| |||||| ||| |||||    
T  16333 ggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcacttgcgaggtgagggcctc 16420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 11441 - 11302
Alignment:
Q  181 tcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaaca 280  Q
    |||||||||||||||||| ||||||||||  | ||||||||||||||||||| |||||||||||| || | |||||| ||||||||||||||||| ||||    
T  11441 tcagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatctaaca 11342  T
Q  281 agtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||||||  ||||||||||||| |||||||||    
T  11341 agtcactttgtttctgtgtcactcgcgaggtgagagcctc 11302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11554 - 11447
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||| ||||||| | |||||||| ||||||||||||||||||||| ||||||||| |||| ||  |||||  |||||||||||||||||||||||||||    
T  11554 cttcaacaacttaaaccgactcatgcagcttagttaaataacaacaacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattc 11455  T
Q  99 atcaacat 106  Q
    ||||||||    
T  11454 atcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3297 - 3103
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||  |||||| |||| ||||||||||||| |  |||||    
T  3297 cttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattc 3198  T
Q  99 atcaacatcttatgtatacaaatattcttcaagtaatgc-ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacag 192  Q
    | |||||||| | |||||||   ||  ||||||||||||  | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  3197 aacaacatctcaagtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 320
Target Start/End: Original strand, 1052 - 1246
Alignment:
Q  127 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 225  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  || |||||||||||||| ||| |||| |  | |||||||||| |    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac 1151  T
Q  226 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||  ||||||||||| || | |||||| |||||||||||||| ||  ||||| |||| ||||||  ||||||||| ||||||||||||||    
T  1152 tacccaaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactttgtttccgggtcactcgtgaggcgagagcctc 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 20597 - 20735
Alignment:
Q  182 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 281  Q
    ||||||||||||||||||||||| ||||  | |||||||||| |||  | | ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  20597 cagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaa 20696  T
Q  282 gtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    | |||||||||||| |||| |||||||||||||||||||    
T  20697 ggcactctgtttctaggtcgctcgcgaggcgagagcctc 20735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 3648 - 3813
Alignment:
Q  155 tcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcg 254  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |||||||| |||||||||||| || | |||    
T  3648 tcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcg 3747  T
Q  255 tgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| ||||||||||    
T  3748 tgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcctc 3813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 7712 - 7877
Alignment:
Q  155 tcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcg 254  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |||||||| |||||||||||| || | |||    
T  7712 tcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaactcg 7811  T
Q  255 tgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| ||||||||||    
T  7812 tgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcctc 7877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 72 - 319
Target Start/End: Original strand, 27913 - 28162
Alignment:
Q  72 atgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaa 170  Q
    |||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  ||||||||||||||| ||||||||| ||| |||||||||||| |||    
T  27913 atgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaa 28012  T
Q  171 catatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca 270  Q
    || ||||||  || |||||||| ||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | |||||||| || | |||    
T  28013 caaatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagattgca 28112  T
Q  271 aaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 319  Q
    ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  28113 aaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct 28162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 74; Significance: 6e-34; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28424 - 28552
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattc 98  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||  |||||  |||||||||||||||||||| ||||||    
T  28424 cttcatcaacttagaccgactcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattc 28523  T
Q  99 atcaacatcttatgtatacaaatattctt 127  Q
    | ||||||||||| ||| ||||| |||||    
T  28524 aacaacatcttatatattcaaatgttctt 28552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11302 - 11363
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  11302 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2007 - 2068
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||  |||||||||||||    
T  2007 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacacaaacataggcagta 2068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4562 - 4605
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaa 44  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||    
T  4562 cttcaacaacttagaccgactcatgcagcttagttaaataacaa 4605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 26838 - 27036
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaacagtatgac-ataataatatcaatttcaattcatcaa 103  Q
    |||| |||| |||||||||| || ||| |||||||||||| |||| |||||||||   ||||  |  || |  ||||| ||||||||| |||||||||||    
T  26838 atcatcttatatcgactcatgcatcttggttaaataacaatagcagcataggcagattacaacaacaatcatgataattatatcaatt-caattcatcaa 26936  T
Q  104 catcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaa 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  ||||| || ||  ||||||||||||||  ||||||    
T  26937 catcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctcata-acagcttcacagattgcagttaa 27035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 51868 - 51673
Alignment:
Q  125 cttcaagtaatgcataaacattataacacttcataa-tcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 223  Q
    ||||||||||||| || |||||||| ||| |||||| ||||||  || || || ||  |||||||||| ||| || ||||  ||||  ||||||||||||    
T  51868 cttcaagtaatgcgtatacattatatcacatcataaatcaacattaatatctcataa-cagcttcacaaattgtaattaatatcatattcaagtcttaat 51770  T
Q  224 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
     |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||    
T  51769 gctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactagcgaggtgagagcctc 51673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 32551 - 32607
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  32551 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 32607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 12859 - 12971
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||  |||||| || |||| ||||||||    
T  12859 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttcac 12957  T
Q  191 agattatagttaac 204  Q
    | |||  |||||||    
T  12958 aaattgcagttaac 12971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 11299 - 11435
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||| ||||| |||||||| || |||||||||||||||||||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  11299 atcaaattagaccgactcatgcaacttagttaaataacaacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 11397  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  11398 acgtctcaattattcacatatgattcaagtaatgcata 11435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 10330 - 10488
Alignment:
Q  155 tcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcg 254  Q
    |||||||||||| ||||| ||||||  ||||||||||||||||  ||||| ||||| | |||||| ||| |||||| | |||||||||||  || | | |    
T  10330 tcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactcttaacaacttg 10429  T
Q  255 tgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 312  Q
    ||||||| || ||||||||||| |||||| |||| ||||||| ||||||||||||||||    
T  10430 tgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcg 10488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 1977 - 2089
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||  ||||   ||||| || || ||||||||||    
T  1977 ttcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttcac 2075  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  2076 agattgcagttaac 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 21824 - 21712
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||||    
T  21824 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 21726  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  21725 agattgcagttaac 21712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 29716 - 29604
Alignment:
Q  91 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 190  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||||    
T  29716 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 29618  T
Q  191 agattatagttaac 204  Q
    |||||  |||||||    
T  29617 agattgcagttaac 29604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 17928 - 17790
Alignment:
Q  168 caacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtc 267  Q
    ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||||||| |||||||| ||||||| |||| || | |||||| |||||||||    
T  17928 caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggtc 17829  T
Q  268 gcaaaatccaacaagtcactctgtttctcggtcactcgc 306  Q
    |||||| | ||||||||||||| ||||| ||| ||||||    
T  17828 gcaaaacctaacaagtcactctatttctgggtgactcgc 17790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 15486 - 15362
Alignment:
Q  40 aacaacagcaacataggcagtaaacaaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgca 138  Q
    ||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||    
T  15486 aacaacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgca 15388  T
Q  139 t-aaacattataacacttcataatca 163  Q
    | |||||||||| ||| | |||||||    
T  15387 taaaacattatatcacattataatca 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 319
Target Start/End: Original strand, 4545 - 4855
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaatttcaattcatcaacatctt 109  Q
    |||| |||||||| || |||||||||||||||||| || |||||||||||  |||   ||| | || || |||||||||| |  |||||| |||||||||    
T  4545 tagaccgactcatgcaacttagttaaataacaacaacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatctt 4644  T
Q  110 atgtatacaaatattcttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctca 208  Q
    |  ||| ||  ||| ||||||||||||||||| |||||||| ||| |||| ||||||| |||||| | | |  |||| ||||| |||||| ||||| ||     
T  4645 aaatattcatttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatct-taaaacagcctcacaaattataattaacatct 4743  T
Q  209 ttctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcg 307  Q
    |    |||||| ||| |||||  | |||||||||||  || | |||||| |||||||||||||||||| |||| | || ||||||||| |||  || |||    
T  4744 tcaataagtctcaatactacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcg 4843  T
Q  308 aggcgagagcct 319  Q
    ||||||||||||    
T  4844 aggcgagagcct 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 5e-19; HSPs: 7)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 44465 - 44602
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagta---aacaaacagtatgacataataatatcaatttcaattcatc 101  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  |||||   || |||||| |||||||||||||||||| | ||| ||| |    
T  44465 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaaacagcatgacataataatatcaaatgcaagtcaac 44563  T
Q  102 aacatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    ||||||| |  ||| || ||||  |||||||||||||||    
T  44564 aacatctcaattattcacatataattcaagtaatgcata 44602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 17591 - 17455
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||| | |||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  17591 atcaacttagaccgactcatgcagcttagttaaataacaatagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 17493  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  17492 acgtctcaattattcacatataattcaagtaatgcata 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 94422 - 94558
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  94422 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 94520  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  94521 acgtctcaattattcacatataattcaagtaatgcata 94558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 100386 - 100445
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  100386 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 100445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 119885 - 119946
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  119885 cttcaacaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 119946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 40283 - 40224
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataa-caacagcaacataggcagta 61  Q
    |||||||||||||  ||||||| ||||||||||||||||  |||||||||||||||||||    
T  40283 tcatcaacttagactgactcatgcagcttagttaaataataaacagcaacataggcagta 40224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 101511 - 101570
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| ||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  101511 tcatcaacttagaccgattcatgcagcttagttaaacaacaaacaacaacataggcagta 101570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 4705 - 4841
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  4705 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 4803  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  4804 acgtctcaattattcacatataattcaagtaatgcata 4841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 13403 - 13539
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  13403 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 13501  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  13502 acgtctcaattattcacatataattcaagtaatgcata 13539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20758 - 20894
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  20758 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 20856  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  20857 acgtctcaattattcacatataattcaagtaatgcata 20894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 37832 - 37968
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  37832 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 37930  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  37931 acgtctcaattattcacatataattcaagtaatgcata 37968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 8e-18; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 136691 - 136827
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  136691 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 136789  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  136790 acgtctcaattattcacatataattcaagtaatgcata 136827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 139160 - 139296
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  139160 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 139258  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  139259 acgtctcaattattcacatataattcaagtaatgcata 139296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 144098 - 144234
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  144098 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 144196  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  144197 acgtctcaattattcacatataattcaagtaatgcata 144234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 134222 - 134358
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  134222 atcaacatagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 134320  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  134321 acgtctcaattattcacatataattcaagtaatgcata 134358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 141629 - 141765
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaa--acagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||| |  ||||| ||||  |||| |||||||||||||||||| | ||| ||| ||    
T  141629 atcaacttagaccgactcatgtagcttagttaaataacaacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaaca 141727  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  141728 acgtctcaattattcacatataattcaagtaatgcata 141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 62224 - 62269
Alignment:
Q  17 cgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  62224 cgactcatgcagcttagttaaacaacaaacagcaacataggcagta 62269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 8481 - 8613
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| |||||||| ||||||||||||||||||| || ||||||||||||||  |||| ||| |||| |||| |||||||| | ||| |||||||    
T  8481 tcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaa 8580  T
Q  104 catcttatgtatacaaatattcttcaagtaatg 136  Q
    ||||| |  ||| || ||||  |||||||||||    
T  8581 catctcaaatattcatatataattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 6547 - 6606
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  6547 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 10784 - 10869
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| ||  |||||  ||||||||||||||||||    
T  10784 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 10869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 19276 - 19335
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  19276 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagta 19335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 160696 - 160755
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  160696 tcatcaacttagaccgactcatgcagcttagttaaataacaatcagcaacataggcagta 160755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 501095 - 501231
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| || ||  |||||  |||||||||||||||||| | ||| ||| ||    
T  501095 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gcaatatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 501193  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  501194 acgtctcaattattcacatataattcaagtaatgcata 501231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 85731 - 85646
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||| |||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  85731 atcatcttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 85646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 4308 - 4408
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| | | |||| ||  |||||  |||||||||||||||||||| ||| ||| ||    
T  4308 atcaacttagaccgactcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaattgcaaatcaaca 4406  T
Q  103 ac 104  Q
    ||    
T  4407 ac 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 13958 - 14094
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||| |  ||||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  13958 atcaacttagaccgactcatgcagcttagataaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaaca 14056  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  14057 acgtctcaattattcacatataattcaagtaatgcata 14094  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 82083 - 82219
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaatttcaattcatca 102  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||| | | |||| ||  |||||| |||||||||||||||||| | ||| ||| ||    
T  82083 atcaacttagaccgactcatgaagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 82181  T
Q  103 acatcttatgtatacaaatattcttcaagtaatgcata 140  Q
    || ||| |  ||| || ||||  |||||||||||||||    
T  82182 acgtctcaattattcacatataattcaagtaatgcata 82219  T

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Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 22776 - 22720
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||||||| |||||| |||||| |||||    
T  22776 tcaacttagaccgactcatgcagcttagttaaataacaaacagcgacatagacagta 22720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 1051 - 1151
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||||  | |||||| |||| |||| |||||||| | | | |||||||||||    
T  1051 cttagaccgactcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatc 1150  T
Q  108 t 108  Q
    |    
T  1151 t 1151  T

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Target: scaffold0395 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4944 - 4888
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataacaacagcaacataggc 57  Q
    ||||||||||||||| | |||||| || |||||||||||||||||||||||||||||    
T  4944 cttcatcaacttagaccaactcatgcaacttagttaaataacaacagcaacataggc 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 947 - 759
Alignment:
Q  126 ttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 224  Q
    ||||||||||||| | ||||||||| ||| || ||||| ||| ||||| ||||||  |||||||||| || |||  || | |||   | |||||| |||     
T  947 ttcaagtaatgcacataacattatatcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaata 848  T
Q  225 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 312  Q
    |||||  | |||||||||||| ||   |||||| |||||||||| ||||||| |||||| | |||||||||| |||||||| |||||||    
T  847 ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcctaacaagactctctgtttctaggtcactcacgaggcg 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 15675 - 15739
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaac 68  Q
    ||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| ||||||    
T  15675 atcaacttagaccgactcgtgcagcttagttaaataacaaacagcaacataggcagtatacaaac 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 29946 - 30028
Alignment:
Q  8 aacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  29946 aacttagaccgactcatgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 30028  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 116441 - 116544
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |  ||||| || |||||| |||||||||| ||||||| | ||| ||| |||    
T  116441 atcaacttagaccgactcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaacagcatgacataatcatatcaaatgcaagtcaacaa 116539  T
Q  104 catct 108  Q
    |||||    
T  116540 catct 116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 129072 - 129021
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||| |||||||| |||||||||||| |||||| |||||||||||||||||    
T  129072 cttagaccgactcatgcagcttagttaa-taacaaacagcaacataggcagta 129021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 14806 - 14746
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaa 62  Q
    ||||||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||    
T  14806 tcatcaacttagaccgactcatgcagcttagttaactaacaaacagcaacataggcagtaa 14746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 170 - 237
Alignment:
Q  254 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||    
T  170 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgtggcgagagcctc 237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 9253 - 9300
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  9253 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 5655 - 5714
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||    
T  5655 tcatcaacttagaccgactcatgcagcttagtaaaataacaaacagcaacataggcagta 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 2754 - 2695
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  2754 tcatcaacttagaccgactcatgcagcttagttaaataacaaacatcaacataggcagta 2695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 16795 - 16842
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  16795 atcaacttagaccgactcatgcagcttagttaaataacaacagcaaca 16842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 40411 - 40496
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||| |  ||||| ||  |||||| ||||||||||||||||||    
T  40411 atcaacttagaccgactcgtgcagcttagttaaataacaacagcaacaca-acagtatacaaaaacaggatgacataataatatcaa 40496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 20524 - 20394
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatct 108  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |  ||||| || |||||  |||||||||||||||||| | ||| ||| |||| |||    
T  20524 cttagaccgactcatgcagcttagttaaataacaacagcaacaca-tcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacgtct 20426  T
Q  109 tatgtatacaaatattcttcaagtaatgcata 140  Q
     |  ||| || ||||  |||||||||||||||    
T  20425 caattattcacatataattcaagtaatgcata 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 128765 - 128897
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaa 103  Q
    ||||| ||||| | |||||| || |||||||||||||||| ||||||| |   |  ||| ||| ||| |||||||||||||||||| | ||| ||| |||    
T  128765 atcaaattagaccaactcatgcaacttagttaaataacaaaagcaacaaaaaaaaaaaaaaaaacagcatgacataataatatcaaatgcaagtcaacaa 128864  T
Q  104 catcttatgtatacaaatattcttcaagtaatg 136  Q
    |||||||  ||| ||| ||| ||||||||||||    
T  128865 catcttaaatattcaattatacttcaagtaatg 128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 129917 - 129976
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataaca-acagcaacataggcagta 61  Q
    ||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||    
T  129917 tcatcaacttagaccgactcatgcatcttagttaaataacacacagcaacataggcagta 129976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 3575 - 3429
Alignment:
Q  65 aaacagtatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatca 163  Q
    |||||| |||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| |||||||||    
T  3575 aaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatca 3476  T
Q  164 acaacaacatatctt-attcagcttcacagattatagttaacctcat 209  Q
    ||| ||||| ||||| |  |||||||| |||||||| ||||| ||||    
T  3475 acatcaacacatcttaaaacagcttcatagattataattaacatcat 3429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 1096 - 1153
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  1096 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6625 - 6682
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  6625 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 14005 - 14062
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  14005 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 14062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 6230 - 6173
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||    
T  6230 atcaacttagaccgactcatgcagcttagttaaataacaaacagtaacataggcagta 6173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28879 - 28819
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataaca--acagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  28879 tcatcaacttagaccgactcatgcagcttagttaaacaacattacagcaacataggcagta 28819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15884 - 15827
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  15884 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 15827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 178912 - 178961
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaacagcaacataggca 58  Q
    ||||||| |||||||| |||||| |||||||||||| |||| ||||||||    
T  178912 acttagaccgactcatgcagcttggttaaataacaatagcagcataggca 178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 206624 - 206575
Alignment:
Q  12 tagatcgactcatacagcttagttaaataacaacagcaacataggcagta 61  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  206624 tagatcgactcatgcagcttagttaataaacaacagcaacataggcagta 206575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 1947 - 1865
Alignment:
Q  239 aactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctc 320  Q
    ||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || ||||||||||||||||||||||||    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctc 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 10647 - 10591
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||    
T  10647 tcaacttagaccgacttatgcagcttagttaaataacaaacagcaacataggcagta 10591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 23989 - 23933
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||    
T  23989 tcaacttagaccgactcatgtagcttagttaaataacaaacagcaacataggcagta 23933  T

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Target: scaffold1439 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 117 - 164
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||    
T  117 atcaacttagaccgacttatgcagcttagttaaataacaacagcaaca 164  T

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Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 4225 - 4310
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaacaaa--cagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| || |||||||||||||| ||||| ||| | |||||| |||||  ||| ||||||||||||||||||    
T  4225 atcaacttagaccgactcatgcaacttagttaaataacgacagcgacaca-gcagtatacaaaaccagcatgacataataatatcaa 4310  T

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Target: scaffold0628 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 2915 - 2856
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||| ||||||||||||    
T  2915 tcatcatcttagaccgactcatgcagcttagttaaataacaaacagctacataggcagta 2856  T

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Target: scaffold0556 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 6824 - 6883
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||||||||    
T  6824 tcatcatcttagaccgactcatgcagctcagttaaataacaaacagcaacataggcagta 6883  T

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Target: scaffold0494 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 12400 - 12353
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||    
T  12400 atcaacttagaccgacttatgcagcttagttaaataacaacagcaaca 12353  T

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Target: scaffold0218 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 8180 - 8117
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaac 68  Q
    |||||||||| |||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||    
T  8180 tcaacttagaccgactcatgcagcttagttaacaaacaaacagcaacataggcagtatacaaac 8117  T

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Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 45901 - 45842
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||||    
T  45901 tcatcaacttagaccgactcatgcagcttagttaaataacaaacagaaaaataggcagta 45842  T

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Target: scaffold0503 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 11982 - 12024
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaacagcaaca 52  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  11982 cttagaccgactcatgcagcttagttaaataacaacagcaaca 12024  T

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Target: scaffold0198 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 23853 - 23907
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||| |||||||||    
T  23853 atcaacttagaccgactcatgcagcttggttaaataacaatagcaccataggcag 23907  T

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Target: scaffold0530 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1141 - 1084
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  1141 atcaacttagaccgactcatgcagcttagttaaataacaaacaacaacataggtagta 1084  T

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Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 11482 - 11535
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||| ||||||| |||||||||||| |||||| |||||||||||||||||    
T  11482 acttagattgactcatgcagcttagttaattaacaatcagcaacataggcagta 11535  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1180 - 1119
Alignment:
Q  1 cttcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||| || |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  1180 cttcaacatcttagaccgactcatgcagcttagttaaataacaaacaacaacataggcagta 1119  T

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Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 38359 - 38306
Alignment:
Q  9 acttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagta 61  Q
    |||||||| ||||||| |||||||||||| |||||| |||||||||||||||||    
T  38359 acttagattgactcatgcagcttagttaattaacaatcagcaacataggcagta 38306  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 161239 - 161156
Alignment:
Q  7 caacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||| |||||||| ||||||||||||||| ||||||| ||| | |||||| ||  |||||  ||||||||||||||||||    
T  161239 caacttagaccgactcatgcagcttagttaaatatcaacagcgacaca-gcagtatacaaaaacataatgacataataatatcaa 161156  T

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Target: scaffold0476 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 12778 - 12834
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggca 58  Q
    ||||||||||||| |||||||| |||||||| |||||||| |||| |||||||||||    
T  12778 tcatcaacttagaccgactcatgcagcttagctaaataacaaacaacaacataggca 12834  T

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Target: scaffold0413 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 12587 - 12687
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataacaa-cagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| ||||||||  |||||||||||  ||||| |||||||||||||||||  |||| ||| |||| |||| |||||||| | ||| |||||||||||    
T  12587 cttagaccgactcatgtagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatc 12686  T
Q  108 t 108  Q
    |    
T  12687 t 12687  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 25121 - 25177
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  25121 tcaacttagaccgactcatgcagcttagttaataaacaaacagcaacataggcagta 25177  T

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Target: scaffold1984 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 141 - 200
Alignment:
Q  3 tcatcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||||| ||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  141 tcatcaacttagaccgattcatgcagcttagttaaacaacaaacaacaacataggcagta 200  T

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Target: scaffold0247 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 2280 - 2237
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagc 48  Q
    ||||||||||| |||||| | |||||||||||||||||||||||    
T  2280 atcaacttagaccgactcttgcagcttagttaaataacaacagc 2237  T

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Target: scaffold0138 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 12954 - 13057
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaacaaa-cagtatgacataataatatcaatttcaattcatcaa 103  Q
    |||||||||| |||||||| | ||| ||||||||||| |||| ||||||||||||||  |||| ||| |||| |||| |||||| | | ||| |||||||    
T  12954 tcaacttagaccgactcatgctgctcagttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaa 13053  T
Q  104 catc 107  Q
    ||||    
T  13054 catc 13057  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 1432 - 1347
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 89  Q
    ||||||||||| |||||||| |||||| ||||||||||||||  |||| | | |||| ||  |||||| ||||||||||||||||||    
T  1432 atcaacttagaccgactcatgcagcttggttaaataacaacaataacacatg-agtatacaaaaacagcatgacataataatatcaa 1347  T

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Target: scaffold0297 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 10629 - 10575
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggcag 59  Q
    |||| |||| |||||||||| || ||| |||||||||||| ||||||||||||||    
T  10629 atcatcttatatcgactcatgcaacttggttaaataacaatagcaacataggcag 10575  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 36464 - 36517
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataacaacagcaacataggca 58  Q
    ||||||||||| |||||||| |||||| |||||||||||| || | ||||||||    
T  36464 atcaacttagaccgactcatgcagcttggttaaataacaatagtagcataggca 36517  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 38809 - 38752
Alignment:
Q  5 atcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    ||||||||||| | |||||| || |||||||||||||| ||||||||||||| |||||    
T  38809 atcaacttagacctactcatgcaccttagttaaataacaaacagcaacatagacagta 38752  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 13147 - 13247
Alignment:
Q  10 cttagatcgactcatacagcttagttaaataac-aacagcaacataggcagtaaac-aaacagtatgacataataatatcaatttcaattcatcaacatc 107  Q
    |||||| |||||||| ||||||||||||  ||| |||| ||||||||||||||  | |||||| |||| |||| |||||||| | ||| ||| |||||||    
T  13147 cttagaccgactcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatc 13246  T
Q  108 t 108  Q
    |    
T  13247 t 13247  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 10542 - 10598
Alignment:
Q  6 tcaacttagatcgactcatacagcttagttaaataac-aacagcaacataggcagta 61  Q
    |||||||||| |||||||| ||||||  ||||||||| |||| ||||||||||||||    
T  10542 tcaacttagaccgactcatgcagcttttttaaataacaaacaacaacataggcagta 10598  T

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