View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7856_low_5 (Length: 245)

Name: NF7856_low_5
Description: NF7856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7856_low_5
NF7856_low_5
[»] chr3 (57 HSPs)
chr3 (43-245)||(6302984-6303186)
chr3 (43-245)||(27543946-27544148)
chr3 (10-245)||(10201260-10201517)
chr3 (10-245)||(16461820-16462077)
chr3 (74-245)||(10208306-10208478)
chr3 (74-245)||(29914261-29914432)
chr3 (10-245)||(10094380-10094631)
chr3 (74-245)||(10100397-10100569)
chr3 (10-240)||(43227999-43228229)
chr3 (8-92)||(10595492-10595576)
chr3 (8-92)||(10901363-10901447)
chr3 (8-92)||(54192862-54192946)
chr3 (10-240)||(47878484-47878714)
chr3 (146-240)||(54188283-54188377)
chr3 (74-238)||(10896707-10896872)
chr3 (10-90)||(4308771-4308851)
chr3 (82-229)||(22627488-22627635)
chr3 (74-240)||(5858249-5858415)
chr3 (10-92)||(35918437-35918519)
chr3 (151-240)||(54193005-54193094)
chr3 (74-203)||(29963456-29963585)
chr3 (10-91)||(7606915-7606996)
chr3 (146-240)||(10613091-10613185)
chr3 (8-65)||(6063984-6064041)
chr3 (151-240)||(10595344-10595433)
chr3 (10-65)||(10956541-10956596)
chr3 (10-64)||(11170112-11170166)
chr3 (10-65)||(18097400-18097455)
chr3 (43-92)||(22627646-22627695)
chr3 (42-92)||(5858196-5858246)
chr3 (10-56)||(5899424-5899470)
chr3 (42-92)||(10896654-10896704)
chr3 (42-92)||(20031833-20031883)
chr3 (43-92)||(27101748-27101797)
chr3 (43-92)||(43225827-43225876)
chr3 (43-92)||(51727494-51727543)
chr3 (44-92)||(54188160-54188208)
chr3 (42-92)||(10949761-10949811)
chr3 (43-92)||(9605101-9605150)
chr3 (43-92)||(11079169-11079218)
chr3 (78-240)||(51727325-51727487)
chr3 (42-92)||(25690844-25690894)
chr3 (42-75)||(10208498-10208531)
chr3 (43-92)||(27762508-27762557)
chr3 (43-92)||(47883363-47883412)
chr3 (44-92)||(29956218-29956266)
chr3 (44-92)||(30005373-30005421)
chr3 (115-240)||(4308600-4308725)
chr3 (167-240)||(25690675-25690748)
chr3 (167-240)||(27101579-27101652)
chr3 (167-240)||(29956529-29956602)
chr3 (167-240)||(30005684-30005757)
chr3 (42-71)||(10100593-10100622)
chr3 (59-92)||(10613260-10613293)
chr3 (40-92)||(4535259-4535311)
chr3 (43-75)||(29914452-29914484)
chr3 (43-75)||(29963605-29963637)
[»] chr8 (26 HSPs)
chr8 (8-242)||(25684261-25684516)
chr8 (8-245)||(16752829-16753087)
chr8 (10-245)||(28332251-28332507)
chr8 (10-245)||(4812793-4813051)
chr8 (74-245)||(28327613-28327784)
chr8 (74-245)||(28895205-28895376)
chr8 (146-245)||(16757574-16757673)
chr8 (151-239)||(590574-590662)
chr8 (8-89)||(590431-590512)
chr8 (10-92)||(3275919-3276001)
chr8 (146-240)||(29555098-29555193)
chr8 (10-66)||(15072473-15072529)
chr8 (10-65)||(18812635-18812690)
chr8 (10-65)||(27829060-27829115)
chr8 (11-90)||(28895121-28895200)
chr8 (10-65)||(43081689-43081744)
chr8 (43-92)||(16757727-16757776)
chr8 (43-92)||(28327561-28327610)
chr8 (167-240)||(21033665-21033739)
chr8 (75-137)||(16757661-16757723)
chr8 (42-92)||(29555268-29555318)
chr8 (43-92)||(9021589-9021638)
chr8 (151-240)||(9021420-9021509)
chr8 (43-92)||(23180042-23180091)
chr8 (41-92)||(21033518-21033569)
chr8 (167-240)||(22684987-22685060)
[»] chr6 (40 HSPs)
chr6 (10-245)||(13883095-13883351)
chr6 (10-245)||(31249020-31249276)
chr6 (10-245)||(35201632-35201888)
chr6 (74-245)||(13878432-13878603)
chr6 (8-245)||(35208867-35209125)
chr6 (74-245)||(26887530-26887702)
chr6 (74-245)||(16785624-16785795)
chr6 (74-245)||(30975005-30975176)
chr6 (74-245)||(30981444-30981615)
chr6 (74-245)||(30987608-30987779)
chr6 (151-240)||(25941425-25941514)
chr6 (41-137)||(33215497-33215593)
chr6 (74-240)||(25466212-25466379)
chr6 (10-65)||(26066589-26066644)
chr6 (10-65)||(33310921-33310976)
chr6 (146-240)||(17695164-17695258)
chr6 (10-65)||(30729324-30729379)
chr6 (43-92)||(26887705-26887754)
chr6 (10-65)||(15533198-15533253)
chr6 (43-89)||(16785572-16785618)
chr6 (41-92)||(1230718-1230769)
chr6 (42-85)||(13878379-13878422)
chr6 (42-92)||(17695333-17695383)
chr6 (10-52)||(22344783-22344825)
chr6 (42-92)||(26064755-26064805)
chr6 (42-92)||(26084724-26084774)
chr6 (43-92)||(26642829-26642878)
chr6 (43-92)||(26748795-26748844)
chr6 (43-92)||(28241811-28241860)
chr6 (56-92)||(25941330-25941366)
chr6 (78-240)||(26084781-26084943)
chr6 (43-75)||(30975196-30975228)
chr6 (43-75)||(30981635-30981667)
chr6 (43-75)||(30987799-30987831)
chr6 (74-137)||(25941369-25941432)
chr6 (167-240)||(1230570-1230643)
chr6 (167-240)||(26064901-26064974)
chr6 (47-92)||(22343286-22343331)
chr6 (43-91)||(14507668-14507716)
chr6 (43-71)||(25466403-25466431)
[»] chr2 (39 HSPs)
chr2 (10-245)||(39686603-39686859)
chr2 (74-245)||(45567114-45567285)
chr2 (10-245)||(2740561-2740817)
chr2 (74-245)||(17462140-17462312)
chr2 (74-245)||(2735910-2736081)
chr2 (74-245)||(39679750-39679921)
chr2 (74-245)||(22717533-22717704)
chr2 (77-243)||(33674715-33674881)
chr2 (8-92)||(17943175-17943259)
chr2 (10-240)||(22712829-22713059)
chr2 (10-92)||(30478633-30478715)
chr2 (151-245)||(17932414-17932508)
chr2 (10-92)||(20050505-20050587)
chr2 (151-240)||(17943318-17943407)
chr2 (151-240)||(35894574-35894663)
chr2 (164-240)||(12781533-12781609)
chr2 (164-240)||(30478787-30478863)
chr2 (10-65)||(36559336-36559391)
chr2 (43-240)||(45280306-45280503)
chr2 (151-240)||(27517954-27518043)
chr2 (43-92)||(17462088-17462137)
chr2 (8-65)||(28462822-28462879)
chr2 (43-92)||(39679698-39679747)
chr2 (41-92)||(2735856-2735907)
chr2 (10-65)||(30262269-30262324)
chr2 (151-240)||(20050335-20050425)
chr2 (14-91)||(19502502-19502579)
chr2 (43-92)||(45567062-45567111)
chr2 (10-65)||(6259332-6259387)
chr2 (43-92)||(12781702-12781751)
chr2 (44-103)||(17932328-17932387)
chr2 (42-92)||(27518102-27518152)
chr2 (43-92)||(20055251-20055300)
chr2 (45-92)||(5377901-5377948)
chr2 (42-92)||(37171234-37171284)
chr2 (42-72)||(22717727-22717757)
chr2 (42-92)||(38190648-38190698)
chr2 (43-92)||(35894722-35894771)
chr2 (43-75)||(33674904-33674936)
[»] chr1 (20 HSPs)
chr1 (10-240)||(9526084-9526335)
chr1 (74-245)||(2232314-2232473)
chr1 (74-245)||(9521419-9521589)
chr1 (10-92)||(2393763-2393845)
chr1 (151-240)||(21353659-21353749)
chr1 (10-91)||(51752071-51752152)
chr1 (10-66)||(14098487-14098543)
chr1 (10-66)||(20302165-20302221)
chr1 (10-65)||(47179395-47179450)
chr1 (10-65)||(16228203-16228258)
chr1 (10-65)||(28842200-28842255)
chr1 (42-92)||(2232261-2232311)
chr1 (42-92)||(2401677-2401727)
chr1 (43-92)||(9521367-9521416)
chr1 (41-92)||(2617278-2617329)
chr1 (10-64)||(28201926-28201980)
chr1 (43-92)||(21353808-21353857)
chr1 (43-92)||(23689335-23689384)
chr1 (43-92)||(25133681-25133730)
chr1 (43-91)||(20291280-20291328)
[»] chr7 (30 HSPs)
chr7 (10-245)||(3320356-3320613)
chr7 (10-245)||(25405013-25405269)
chr7 (10-245)||(7074407-7074663)
chr7 (74-245)||(3325104-3325275)
chr7 (74-245)||(7069485-7069656)
chr7 (8-92)||(30246607-30246691)
chr7 (8-92)||(25409768-25409852)
chr7 (167-240)||(34547176-34547249)
chr7 (10-65)||(1047481-1047536)
chr7 (10-65)||(22136845-22136900)
chr7 (10-65)||(40551872-40551927)
chr7 (43-137)||(48457441-48457535)
chr7 (151-240)||(30246750-30246839)
chr7 (74-240)||(44512838-44513005)
chr7 (10-64)||(44281-44335)
chr7 (37-92)||(7464980-7465035)
chr7 (74-240)||(25351057-25351223)
chr7 (43-92)||(7069433-7069482)
chr7 (179-240)||(25356856-25356917)
chr7 (179-240)||(25409939-25410000)
chr7 (43-242)||(2120592-2120791)
chr7 (41-92)||(8378900-8378951)
chr7 (43-92)||(34547324-34547373)
chr7 (151-240)||(7464831-7464921)
chr7 (43-92)||(25351005-25351054)
chr7 (43-92)||(25356699-25356748)
chr7 (45-90)||(40946076-40946121)
chr7 (43-92)||(44144389-44144438)
chr7 (43-92)||(44513008-44513057)
chr7 (43-91)||(3878322-3878370)
[»] chr5 (28 HSPs)
chr5 (10-245)||(25452113-25452369)
chr5 (74-245)||(1170516-1170687)
chr5 (10-92)||(40222381-40222463)
chr5 (10-92)||(6747011-6747093)
chr5 (74-245)||(2298309-2298476)
chr5 (151-240)||(35385765-35385854)
chr5 (151-240)||(22672612-22672703)
chr5 (10-65)||(10756927-10756982)
chr5 (10-65)||(15355043-15355098)
chr5 (10-65)||(23667076-23667131)
chr5 (10-65)||(31544765-31544820)
chr5 (10-64)||(34477611-34477665)
chr5 (10-65)||(659680-659735)
chr5 (10-65)||(20504430-20504485)
chr5 (10-65)||(31466474-31466529)
chr5 (43-92)||(42237954-42238003)
chr5 (49-92)||(1170470-1170513)
chr5 (184-243)||(25445305-25445364)
chr5 (42-92)||(35385913-35385963)
chr5 (43-92)||(1240078-1240127)
chr5 (43-89)||(10529592-10529638)
chr5 (42-92)||(22672503-22672553)
chr5 (43-92)||(6744801-6744850)
chr5 (43-92)||(25445219-25445268)
chr5 (43-75)||(2298496-2298528)
chr5 (167-240)||(6747189-6747262)
chr5 (167-240)||(39854369-39854442)
chr5 (42-90)||(4409796-4409844)
[»] chr4 (41 HSPs)
chr4 (74-245)||(11853254-11853425)
chr4 (8-92)||(4884496-4884580)
chr4 (74-240)||(18586668-18586835)
chr4 (10-92)||(15316597-15316679)
chr4 (10-103)||(4569690-4569786)
chr4 (8-65)||(11006759-11006816)
chr4 (10-65)||(9174662-9174717)
chr4 (10-65)||(16932338-16932393)
chr4 (10-65)||(36920103-36920158)
chr4 (146-240)||(16489125-16489219)
chr4 (10-64)||(22044909-22044963)
chr4 (74-240)||(8528970-8529136)
chr4 (10-65)||(22780930-22780985)
chr4 (10-65)||(24880225-24880280)
chr4 (10-91)||(3825064-3825145)
chr4 (151-240)||(15316738-15316827)
chr4 (179-240)||(15830949-15831010)
chr4 (165-240)||(31300217-31300293)
chr4 (41-92)||(15311992-15312043)
chr4 (167-240)||(4556372-4556446)
chr4 (11-65)||(16638517-16638571)
chr4 (42-92)||(18586615-18586665)
chr4 (42-92)||(31300073-31300123)
chr4 (43-92)||(11853202-11853251)
chr4 (43-92)||(16489001-16489050)
chr4 (74-240)||(40636920-40637086)
chr4 (154-240)||(15312105-15312191)
chr4 (47-92)||(15830817-15830862)
chr4 (20-64)||(22048554-22048598)
chr4 (43-90)||(6764654-6764701)
chr4 (43-90)||(47868195-47868242)
chr4 (42-92)||(4556536-4556586)
chr4 (47-92)||(8631913-8631958)
chr4 (43-92)||(16689423-16689472)
chr4 (43-92)||(26086243-26086292)
chr4 (43-92)||(40636868-40636917)
chr4 (10-52)||(22801354-22801396)
chr4 (43-92)||(8528918-8528967)
chr4 (167-240)||(8631744-8631817)
chr4 (167-240)||(47868340-47868413)
chr4 (14-42)||(47747342-47747370)
[»] scaffold0131 (2 HSPs)
scaffold0131 (74-245)||(30845-31017)
scaffold0131 (45-92)||(30795-30842)
[»] scaffold0256 (2 HSPs)
scaffold0256 (74-245)||(16028-16199)
scaffold0256 (43-92)||(15976-16025)
[»] scaffold1764 (2 HSPs)
scaffold1764 (10-92)||(1075-1157)
scaffold1764 (151-245)||(1216-1310)
[»] scaffold0209 (2 HSPs)
scaffold0209 (151-240)||(17299-17388)
scaffold0209 (42-89)||(17450-17497)
[»] scaffold0006 (3 HSPs)
scaffold0006 (151-245)||(224601-224695)
scaffold0006 (74-137)||(224545-224608)
scaffold0006 (60-92)||(224510-224542)
[»] scaffold0140 (1 HSPs)
scaffold0140 (10-65)||(24157-24212)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-91)||(69785-69868)
[»] scaffold0004 (2 HSPs)
scaffold0004 (151-240)||(188555-188645)
scaffold0004 (43-92)||(188704-188753)
[»] scaffold0250 (1 HSPs)
scaffold0250 (11-64)||(2597-2650)
[»] scaffold0552 (1 HSPs)
scaffold0552 (43-90)||(1302-1349)
[»] scaffold0038 (1 HSPs)
scaffold0038 (43-92)||(41973-42022)
[»] scaffold0016 (1 HSPs)
scaffold0016 (43-83)||(120569-120609)


Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 43 - 245
Target Start/End: Original strand, 6302984 - 6303186
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgc 142  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||   ||    
T  6302984 tgtgagagttaacttaaaatcagaaatctggagcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagc 6303083  T
Q  143 aggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaataca 242  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  6303084 agggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaataca 6303183  T
Q  243 gcc 245  Q
    |||    
T  6303184 gcc 6303186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 43 - 245
Target Start/End: Original strand, 27543946 - 27544148
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgc 142  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||   ||    
T  27543946 tgtgagagttaacttaaaatcagaaatttggagtatcgtgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagc 27544045  T
Q  143 aggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaataca 242  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||    
T  27544046 agggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagtaagatttgtttcagttttttaagggtttactttccactataaataca 27544145  T
Q  243 gcc 245  Q
    |||    
T  27544146 gcc 27544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 10201517 - 10201260
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||                     
T  10201517 catcatcactgatttgaagtcaaggtggagaattgtgagatttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgccacga 10201418  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||||  ||||||||| ||   |    |||||||||||||||||||||||||||||||||||||||||||    
T  10201417 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacaatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 10201318  T
Q  189 ttt-cagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  10201317 ttttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 10201260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 16461820 - 16462077
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  16461820 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 16461919  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaa-ataaaacgta 187  Q
        |||||||||||||||||| |   ||||||||||||||||||||||   || | |||| ||||||||||   |||||||||||||| ||||||||||    
T  16461920 ttgttgaagcaagattcctgggaaactactggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaaataaaacgta 16462019  T
Q  188 ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  16462020 ttttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 16462077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 10208478 - 10208306
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||| ||||| ||||||||||||  ||||||||||||   |    ||||||||||||||||||||||||||||    
T  10208478 agcatcgcgccacgatggttgaagcaagatttctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat 10208379  T
Q  174 aaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||| ||||||||||||||||||| |||||| || | ||||||||||||||||||||||||||    
T  10208378 aaaaataaaacgtatttttcagttagatttgttttagttttttaagggtttactttccactataaatacagcc 10208306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 29914432 - 29914261
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||||||| ||  ||||||||  ||||||||||||    | | |||| ||||||||||||||  |||||||    
T  29914432 agcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagat 29914333  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  29914332 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 29914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 10094631 - 10094380
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||                     
T  10094631 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgtcacga 10094532  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgta- 187  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   |    |||| ||||||||||||||       ||||||||||||||||     
T  10094531 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgtgccacgatggtcgc------tataaaaataaaacgtat 10094438  T
Q  188 ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  10094437 ttttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 10094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 10100569 - 10100397
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||| ||||| ||||||||||||  ||||||||||||   |    |||||||||||||| |||||||||||||    
T  10100569 agcatcgcgccacgatggttgaagcaagatttctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatgatcgcgctgaagat 10100470  T
Q  174 aaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||| |||||| |||||    
T  10100469 aaaaataaaacgtatttttcagttagatttgtttcagttttttaagggtttactttccacgataaattcagcc 10100397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 43227999 - 43228229
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  | |||||||| | ||||||    
T  43227999 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattctggagaatcgtgccacgactgttgaagcaa-aatcctgg 43228097  T
Q  110 -gcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgttt 206  Q
     |||  ||| |||||||||||||||||||      | |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  ||||||||||    
T  43228098 agcaatcacgggaaaaatcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgttt 43228196  T
Q  207 cagttttatatgagtttactttccactataaata 240  Q
    ||||||| || | | ||||||| |||||||||||    
T  43228197 cagttttttaagggattacttt-cactataaata 43228229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 10595576 - 10595492
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10595576 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 10595492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 10901363 - 10901447
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10901363 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgga 10901447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 54192862 - 54192946
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54192862 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 54192946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 47878714 - 47878484
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  47878714 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacga 47878615  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||  ||||||||  |||||||||                     |||||||||||||||||||||||||||||||||    
T  47878614 ttgttgaagcaagattcctgggaagctactggaaatttcgtgccac---------------------gatggtcgcgctgaagataaaaataaaacgtat 47878536  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  47878535 tttcagttagatttgtttcagttttttaagggtttactttccactataaata 47878484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 54188283 - 54188377
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  54188283 atcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 54188377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 238
Target Start/End: Original strand, 10896707 - 10896872
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | ||||||| | ||||| || ||  ||||||||  ||||||||||||   || | |||| |||||||||||||||||||||||    
T  10896707 agcatcgcgccacgattgctgaagcatggttcctaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagat 10896806  T
Q  174 aaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaa 238  Q
    |||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||||    
T  10896807 aaaaataaaacgtatttttcagttagatttgtttcagttttttaagggtttactttccactataaa 10896872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 4308851 - 4308771
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4308851 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatg 4308771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 22627635 - 22627488
Alignment:
Q  82 gccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataa 181  Q
    |||||||| | |||||||||||||   || ||  ||||||||||||||||||||||   || |  ||| |||||||||||||||||||||||||||||||    
T  22627635 gccacgattgttgaagcaagattctgaggaagctactggaaaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataa 22627536  T
Q  182 aacgtattttcagttagatttgtttcagttttatatgagtttactttc 229  Q
    ||||||||||||||||||| |||||||||||| || | ||||||||||    
T  22627535 aacgtattttcagttagatctgtttcagttttttaagggtttactttc 22627488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 5858249 - 5858415
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||   || ||  ||||||||  ||||||||||||    | | |||| ||||||||||||||||| |||||    
T  5858249 agcatcgcgccacgattgttgaagcaagattctgagggagctactggaaatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctaaagat 5858348  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||  |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  5858349 aaaataaaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 5858415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 35918519 - 35918437
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  35918519 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatgga 35918437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 54193005 - 54193094
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||    
T  54193005 gccatgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtgtactttccactataaata 54193094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 29963585 - 29963456
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||||||| ||  ||||||||  ||||||||||||    | | |||| ||||||||||||||  |||||||    
T  29963585 agcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgccacgatggctccgcatcgtgccacgatggtcgcattgaagat 29963486  T
Q  174 aaaaataaaacgtattttcagttagatttg 203  Q
    ||||||||||||||||||||||||||||||    
T  29963485 aaaaataaaacgtattttcagttagatttg 29963456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 7606996 - 7606915
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| || |||||| ||||||||    
T  7606996 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 7606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 10613185 - 10613091
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| |||||||||| ||| |||||||||    ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  10613185 atcgtgccacgatggacgcactgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagtgtttactttccactataaata 10613091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 6064041 - 6063984
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6064041 gacatcatcactgatttgaagtcaaggtggagaattgtgagaattaacttaaaatcag 6063984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 10595433 - 10595344
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||  ||||||||||||    ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  10595433 gccacgatggaggcgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 10595344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 10956596 - 10956541
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10956596 catcatcactgatttgaagtcaaggtggataattgtgagagttaacttaaaatcag 10956541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 11170112 - 11170166
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11170112 catcatcattgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 11170166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 18097455 - 18097400
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18097455 catcatccctgatttaaagtcaaggtggagaattgtgagagttaacttaaaatcag 18097400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 22627695 - 22627646
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22627695 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgga 22627646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 5858196 - 5858246
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  5858196 ttgtgagagttaacttaaaatcaggaatctggagaatcgtgccacgatgga 5858246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 5899424 - 5899470
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaact 56  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  5899424 catcgtcactgatttgaagtcaaggtggagaattgtgagagttaact 5899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 10896654 - 10896704
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  10896654 ttgtgagagttaacttaaaatcagaaatatggagtatcgtgccacgatgga 10896704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 20031883 - 20031833
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20031883 ttgtgagagttaacttaaaatcagaaatctggagaaacgtgccacgatgga 20031833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 27101797 - 27101748
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  27101797 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 27101748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 43225827 - 43225876
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43225827 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 43225876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 51727543 - 51727494
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  51727543 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 51727494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 54188160 - 54188208
Alignment:
Q  44 gtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  54188160 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgatgga 54188208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 10949811 - 10949761
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  10949811 ttgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatgga 10949761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 9605150 - 9605101
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  9605150 tgtgagagttaacttaaaatcagaattctggagaatcgtgctacgatgga 9605101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 11079169 - 11079218
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaacgtgccacgatgga 11079218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 240
Target Start/End: Complemental strand, 51727487 - 51727325
Alignment:
Q  78 tcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaa 177  Q
    |||||||||||| | |||||||| ||||  | |||  |||||||||||||||||||||||      | |||| |||||||||||     |||||||||||    
T  51727487 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgatttgatcgaatcgtgccacgatggtgtgattgaagataaaa 51727388  T
Q  178 ataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  51727387 ataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 51727325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 25690894 - 25690844
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||| ||||  | ||||||||||||||||    
T  25690894 ttgtgagagttaacttaaaatcagaattctgatgaatcgtgccacgatgga 25690844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 10208531 - 10208498
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggag 75  Q
    ||||||||||||||||||||||||||||||||||    
T  10208531 ttgtgagagttaacttaaaatcagaaatctggag 10208498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 27762557 - 27762508
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaacgtgccacgatgga 27762508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 47883412 - 47883363
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||| ||||| | ||||||||||||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaacgtgccacgatgga 47883363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 29956218 - 29956266
Alignment:
Q  44 gtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||    
T  29956218 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatgga 29956266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 30005373 - 30005421
Alignment:
Q  44 gtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||||    
T  30005373 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatgga 30005421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 4308725 - 4308600
Alignment:
Q  115 cactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgct-gaagataaaaataaaacgtattttcagt-tagatttgtttcagttt 212  Q
    |||||||||||||||||||||||      | |||| ||||||||||| ||| | |||||||||||||||||||||||| | |  ||||||||||||||||    
T  4308725 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttt 4308627  T
Q  213 tatatgagtttactttccactataaata 240  Q
    | || | | ||||||| |||||||||||    
T  4308626 tttaagggattacttt-cactataaata 4308600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 25690748 - 25690675
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  25690748 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 25690675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 27101652 - 27101579
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  27101652 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 27101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 29956529 - 29956602
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  29956529 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 29956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 30005684 - 30005757
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  30005684 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 30005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 10100622 - 10100593
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatct 71  Q
    ||||||||||||||||||||||||||||||    
T  10100622 ttgtgagagttaacttaaaatcagaaatct 10100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 10613293 - 10613260
Alignment:
Q  59 aaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  10613293 aaatcagaaatctggagaatcgtgccacgatgga 10613260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 4535259 - 4535311
Alignment:
Q  40 aattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||  ||||||||| ||| |  |||||||||    
T  4535259 aattgtgagagttaacttaaaatcatgaatctggagaatcatatcacgatgga 4535311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 29914484 - 29914452
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||| ||||||||||||||||||||||||||||    
T  29914484 tgtgggagttaacttaaaatcagaaatctggag 29914452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 29963637 - 29963605
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||| ||||||||||||||||||||||||||||    
T  29963637 tgtgggagttaacttaaaatcagaaatctggag 29963605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 25684261 - 25684516
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga--------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
T  25684261 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccac 25684360  T
Q  93 ------tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgt 186  Q
          |||||||||||||||||| ||||||||||||  ||||||||||||   |  | |||||||||||||||||||||||||||||||||||||||||    
T  25684361 gatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagacgcatcgcgccacgatggtcgcgctgaagataaaaataaaacgt 25684460  T
Q  187 attttcagttagatttgtttcagttttatatgagtttactttccactataaataca 242  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  25684461 attttcagttagatttgtttcagttttttaagggtttactttccactataaataca 25684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 16753087 - 16752829
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga--------------- 92  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||                   
T  16753087 gacatcatcactaatttgaagtcaaggtggagaattgtgagacttaacttaaaatcagaaatctggagcatcgtgccacgatagagaggcatcgcgccac 16752988  T
Q  93 ------tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgt 186  Q
          |||||||||||||||||| ||  ||||||||||||||||||||||   ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16752987 gatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgt 16752888  T
Q  187 attttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  16752887 attttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 16752829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 28332251 - 28332507
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     
T  28332251 catcatcgctgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacga 28332350  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||    ||||||||||||   ||   |||||||||||||||||||||||||||||||||||||||||||    
T  28332351 tggctgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 28332450  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28332451 tttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 28332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 4813051 - 4812793
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  4813051 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 4812952  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgta- 187  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||||||| ||||||||     
T  4812951 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaacaaaacgtat 4812852  T
Q  188 -ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
     |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  4812851 tttttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 4812793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 28327613 - 28327784
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||    ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  28327613 agcatcgcgccacgatggctgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 28327712  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28327713 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 28327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 28895205 - 28895376
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||||||| ||  ||||||||||||||||||||||   ||||   || ||||||||||||||| |||||||    
T  28895205 agcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagtgccgtgccacgatggtcgcggtgaagat 28895304  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||    
T  28895305 aaaaataaaacgtattttcagttagatttgtttcagtttttaaagggtttactttccactataaatacagcc 28895376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 16757673 - 16757574
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  16757673 atcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 16757574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 590574 - 590662
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  590574 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaat 590662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 590431 - 590512
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgat 89  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  590431 gacatcatcactgatttgaagtcaaggtgaagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 590512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 3275919 - 3276001
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  3275919 catcatcactgatttgaagtcaaggtggagaattgcgagagttaacttaaaatcagaaatctggagaaacgtgccacgatgga 3276001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 29555193 - 29555098
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| |||||||||||    
T  29555193 atcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagttagatttgtttcagttttttaagggtttacttttcactataaata 29555098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 15072473 - 15072529
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15072473 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 15072529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 18812635 - 18812690
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18812635 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 18812690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 27829060 - 27829115
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27829060 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 27829115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 28895121 - 28895200
Alignment:
Q  11 atcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | || | ||||| ||||||||||||||    
T  28895121 atcatcactgatttgaagtcaaggtggagaattgtgagacttaacttaaaataaaaattttggagaatcgtgccacgatg 28895200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 43081689 - 43081744
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43081689 catcatcattgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 43081744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 16757776 - 16757727
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757776 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 16757727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 28327561 - 28327610
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28327561 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 28327610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 21033665 - 21033739
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| || | | |||||||||||||||||||    
T  21033665 tgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggggttactttccactataaata 21033739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 16757723 - 16757661
Alignment:
Q  75 gcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgat 137  Q
    |||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  16757723 gcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgat 16757661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 29555318 - 29555268
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  29555318 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgctacgatgga 29555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 9021638 - 9021589
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  9021638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 9021589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 9021509 - 9021420
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagtt-agatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||  | ||||||||||   |||||||||||||||||| ||||||||||||||||| || | ||||||||| |||||||||||    
T  9021509 gccacgatggtatcactgaagataattttaaaacgtattttcagtttagatttgtttcagttttttaagggtttacttt-cactataaata 9021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 23180091 - 23180042
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  23180091 tgtgagagttaacttaaaatcaggaatctggagaatcgtgctacgatgga 23180042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 21033518 - 21033569
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||  ||| |||||| ||||||||||||||||    
T  21033518 attgtgagagttaacttaaaatctaaaaactggagaatcgtgccacgatgga 21033569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 22685060 - 22684987
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  22685060 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 22684987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 13883095 - 13883351
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  13883095 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 13883194  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   ||   |||||||||||||||||||||||||||||||||||||||||||    
T  13883195 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 13883294  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  13883295 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 13883351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 31249276 - 31249020
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  31249276 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 31249177  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   |    |||||||||||||||||||||||||||||||||||||||||||    
T  31249176 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 31249077  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  31249076 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 31249020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 35201888 - 35201632
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  35201888 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 35201789  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   |    |||||||||||||||||||||||||||||||||||||||||||    
T  35201788 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 35201689  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  35201688 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 35201632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 13878432 - 13878603
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||   ||||| ||| |||||||||||||||||||||||    
T  13878432 agcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagat 13878531  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  13878532 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 13878603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 35209125 - 35208867
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga--------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||                   
T  35209125 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacaatggagaagcatcgcgccac 35209026  T
Q  93 ------tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgt 186  Q
          |||||||||||||||||| ||||||||||    ||||||||||||   ||   | |||||||||||||||||||||||||||||||||||||||    
T  35209025 gatggttgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcaacgcgccacgatggtcgcgctgaagataaaaataaaacgt 35208926  T
Q  187 attttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  35208925 attttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 35208867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 26887702 - 26887530
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  26887702 agcatcgcgccacgatggttgaagcaagattcctgggcagacactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 26887603  T
Q  174 aaaaataaaacgtatttt-cagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  26887602 aaaaataaaacgtatttttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 26887530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 16785624 - 16785795
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||   ||||| ||| |||||||||||||| ||||||||    
T  16785624 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaaaattgtgccacgatgaagcagggtcgtgccacgatggtcgcactgaagat 16785723  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||| ||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  16785724 aaaaataaaatgtattttcatttagatttgtttcagttttttaagggtttactttccactataaatacagcc 16785795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 30975176 - 30975005
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| ||||||||||||||| || ||||| ||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  30975176 agcatcgcgccacgatggttgaagcaagattccttggaagacattggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 30975077  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  30975076 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 30975005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 30981615 - 30981444
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| ||||||||||||||| || ||||| ||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  30981615 agcatcgcgccacgatggttgaagcaagattccttggaagacattggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 30981516  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  30981515 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 30981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 30987779 - 30987608
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| ||||||||||||||| || ||||| ||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  30987779 agcatcgcgccacgatggttgaagcaagattccttggaagacattggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 30987680  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  30987679 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 30987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 25941425 - 25941514
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  25941425 gccacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 25941514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 33215497 - 33215593
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgat 137  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||    |||| |||||||||||||||||||||||    
T  33215497 attgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgattgttgaagaaagattctgaagcagtcactggaaaaatcgtgccacgat 33215593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 25466379 - 25466212
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||||||||| || | |||||||||||||   || ||  ||||||||  ||||||||||||   || | |||  |||||||||||  ||||||||||    
T  25466379 agcatcgtgccacaattgttgaagcaagattctaaggaagctactggaaatttcgtgccacgatgaagccgcatcatgccacgatggtatcgctgaagat 25466280  T
Q  174 aaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||| ||||||  |||||||||||||||||| || | |||||||||||||||||||||    
T  25466279 aaaaataaaacgtactttcagcatagatttgtttcagttttttaagggtttactttccactataaata 25466212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 26066644 - 26066589
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26066644 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 26066589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 33310921 - 33310976
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33310921 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 33310976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 17695258 - 17695164
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| |||||||||| |||||||||||||    ||||||||||||||| ||||||||||||||||||| || | |||||||||||||||||||||    
T  17695258 atcgtgccacgatggccgcgctgaagatatttttaaaacgtattttcaattagatttgtttcagttttttaagggtttactttccactataaata 17695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 30729379 - 30729324
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30729379 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaatatcag 30729324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 26887754 - 26887705
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26887754 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 26887705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 15533253 - 15533198
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  15533253 catcatcacttatttgaagtcatggtggagaattgtgagagttaacttaaaatcag 15533198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 16785572 - 16785618
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgat 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16785572 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgat 16785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 1230769 - 1230718
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1230769 attgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 1230718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 13878379 - 13878422
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgcca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13878379 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgcca 13878422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 17695383 - 17695333
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17695383 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 17695333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 22344825 - 22344783
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagtt 52  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22344825 catcatcactgatttgaagtcaaggtggagaattgtgagagtt 22344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 26064755 - 26064805
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26064755 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 26064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 26084724 - 26084774
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26084724 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 26084774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 26642829 - 26642878
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  26642829 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatgga 26642878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 26748795 - 26748844
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  26748795 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatgga 26748844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 28241860 - 28241811
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  28241860 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatgga 28241811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 25941330 - 25941366
Alignment:
Q  56 ttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||| ||||||||||||||||    
T  25941330 ttaaaatcagaaatctggagaatcgtgccacgatgga 25941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 240
Target Start/End: Original strand, 26084781 - 26084943
Alignment:
Q  78 tcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgct-gaagataaa 176  Q
    |||||||||||| | |||||||| ||||  | |||  |||||||||||||||||||||||      | |||| | ||||||||| ||| | |||||||||    
T  26084781 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgattgaatcgcatcgtggcacgatggt-gcgattgaagataaa 26084879  T
Q  177 aataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  26084880 aataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 26084943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 30975228 - 30975196
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||||||||||||||||||||||||||||||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggag 30975196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 30981667 - 30981635
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||||||||||||||||||||||||||||||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggag 30981635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 30987831 - 30987799
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||||||||||||||||||||||||||||||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggag 30987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 25941369 - 25941432
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgat 137  Q
    ||||||| |||||||| | |||||||||||||||||| ||  ||||||||  ||||||||||||    
T  25941369 agcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgccacgat 25941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 1230643 - 1230570
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  1230643 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 1230570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 26064901 - 26064974
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  26064901 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 26064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 22343331 - 22343286
Alignment:
Q  47 agagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||| ||||||| |||  |||||||||||    
T  22343331 agagttaacttaaaatcagaattctggagaatcaagccacgatgga 22343286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 14507716 - 14507668
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 14507668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 25466431 - 25466403
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatct 71  Q
    |||||||||||||||||||||||||||||    
T  25466431 tgtgagagttaacttaaaatcagaaatct 25466403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 39686603 - 39686859
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     
T  39686603 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacga 39686702  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||    ||||||||||||   ||   | |||||||||||||||||||||||||||||||||||||||||    
T  39686703 tggttgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcaccgcgccacgatggtcgcgctgaagataaaaataaaacgtat 39686802  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  39686803 tttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 39686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 45567114 - 45567285
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  45567114 agcatcgcgccacgatggttgaagcaagattcctgggcagacactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 45567213  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  45567214 aaaaataaaacgtatttttagttagatttgtttcagttttataagggtttactttccactataaatacagcc 45567285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 2740561 - 2740817
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  2740561 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 2740660  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        ||||||||||||| |||| ||||||||||    | ||||||||||   ||   |||||| ||||||||||||||||||||||||||||||||||||    
T  2740661 tggttgaagcaagattcttgggaagacactggattttttgtgccacgatgaagcctcatcgcgtcacgatggtcgcgctgaagataaaaataaaacgtat 2740760  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  2740761 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 2740817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 17462140 - 17462312
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||   |    ||||||||||||||||||||||||||||    
T  17462140 agcatcgcgccacgatggatgaagcaagattcctggtcagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat 17462239  T
Q  174 aaaaataaaacgtatttt-cagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  17462240 aaaaataaaacgtatttttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 17462312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 2735910 - 2736081
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||    ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  2735910 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 2736009  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  2736010 aaaaataaaacgtattttcagttagatttgtttcagttttttttgggtttactttccactataaatacagcc 2736081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 39679750 - 39679921
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||| ||||||    ||||||||||||   ||   || |||||||||||||||||||||||||    
T  39679750 agcatcgcgccacgatggttgaagcaagattcctgggaagatactggatttttcgtgccacgatgaagcctcattgcgccacgatggtcgcgctgaagat 39679849  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  39679850 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 39679921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 22717704 - 22717533
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||||||| |   ||||||||||||||||||||||   || | |||| ||||||||||   ||||||||||    
T  22717704 agcatcgcgccacgattgttgaagcaagattcctgggaaactactggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagat 22717605  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  22717604 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 22717533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 33674881 - 33674715
Alignment:
Q  77 atcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaa 176  Q
    |||| |||||||| | ||||| |||||||||||| ||  ||||||||||||||||||||||   || |  ||| |||||||||||||||||| |||||||    
T  33674881 atcgcgccacgattgttgaagtaagattcctgggaagctactggaaaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgtagataaa 33674782  T
Q  177 aataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacag 243  Q
    ||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  33674781 aataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacag 33674715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 17943175 - 17943259
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17943175 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 17943259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 22713059 - 22712829
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  22713059 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacga 22712960  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||  ||||||||  |||||||||                     |||||||||||||||||||||||||||||||||    
T  22712959 ttgttgaagcaagattcctgggaagctactggaaatttcgtgccac---------------------gatggtcgcgctgaagataaaaataaaacgtat 22712881  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  22712880 tttcagttagatttgtttcagttttttaagggtttactttccactataaata 22712829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 30478633 - 30478715
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30478633 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 30478715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 17932414 - 17932508
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  17932414 gccacgatggtcgcgttgaagataaaaataaaacgtatattcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 17932508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 20050587 - 20050505
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  20050587 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatgga 20050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 17943318 - 17943407
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  17943318 gccatgatggtcgtgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 17943407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 35894663 - 35894574
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  35894663 gccacgatggcatcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 35894574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 12781609 - 12781533
Alignment:
Q  164 cgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  12781609 cgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 12781533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 30478787 - 30478863
Alignment:
Q  164 cgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| || | |||||||||||||||||||||    
T  30478787 cgctgaagataaaaataaaacgtgttttcagttagatttgttttagttttttaagggtttactttccactataaata 30478863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 36559391 - 36559336
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36559391 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 36559336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 45280503 - 45280306
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgc 142  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||| ||||  | |||  ||||  |||||||||||||||||         
T  45280503 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgattgttgaagcaaaattctggagcaatcactaaaaaaatcgtgccacgattggat 45280404  T
Q  143 aggatcgcgccacgatggtcgcg-ctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
     | |||| ||||||||||| |||  ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  45280403 cgaatcgtgccacgatggt-gcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 45280306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 27518043 - 27517954
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| |||||||||||||    ||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||    
T  27518043 gccacgatggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggtttactttccactataaata 27517954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 17462088 - 17462137
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17462088 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 17462137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 28462879 - 28462822
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  28462879 gacatcatcactgatttgaagtcaaggtggagaattatgaaagttaacttaaaatcag 28462822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 39679698 - 39679747
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 39679747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 2735856 - 2735907
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2735856 attgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgga 2735907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 30262324 - 30262269
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  30262324 catcatcattgatttgaagtcgaggtggagaattgtgagagttaacttaaaatcag 30262269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 20050425 - 20050335
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagtta-gatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| |||||||||||||    ||||||||||||||||| | |||||||||||||||| || | |||||||||||||||||||||    
T  20050425 gccacgatggacgcgctgaagatacttttaaaacgtattttcagtaaagatttgtttcagttttttaagggtttactttccactataaata 20050335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 19502579 - 19502502
Alignment:
Q  14 atcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||   |||| || |||||| ||||||||    
T  19502579 atcactgatttgaattcaaggtggagaattgtgatagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 19502502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 45567062 - 45567111
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45567062 tgtgagcgttaacttaaaatcagaaatctggagcatcgtgccacgatgga 45567111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 6259387 - 6259332
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  6259387 catcatcactgatttaaagtcaaggtggagaattaagagagttaacttaaaatcag 6259332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 12781751 - 12781702
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctggataatcgtgccacgatgga 12781702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 17932328 - 17932387
Alignment:
Q  44 gtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagat 103  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| | |||| ||||||    
T  17932328 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgattgttgaaacaagat 17932387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 27518152 - 27518102
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  27518152 ttgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatgga 27518102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 20055300 - 20055251
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  20055300 tgtgagagttaacttaaaatcagaattctggagaatcatgccacgatgga 20055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 5377948 - 5377901
Alignment:
Q  45 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  5377948 tgagagttaacttaaaatcagaattctggagaatcgtgctacgatgga 5377901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 37171284 - 37171234
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||||||||    
T  37171284 ttgtgagagttaacttaaaataaggaatctggagaaacgtgccacgatgga 37171234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Complemental strand, 22717757 - 22717727
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctg 72  Q
    |||||||||||||||||||||||||||||||    
T  22717757 ttgtgagagttaacttaaaatcagaaatctg 22717727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 38190648 - 38190698
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||| |||||||||| ||| ||||| | ||||||||||||||    
T  38190648 ttgtgagagttaatttaaaatcaggaatatggagaaacgtgccacgatgga 38190698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 35894771 - 35894722
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| || || | ||||||||    
T  35894771 tgtgagagttaacttaaaatcagaattctggagaattgtactacgatgga 35894722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 33674936 - 33674904
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    ||||||||||||||||||||||||||||| |||    
T  33674936 tgtgagagttaacttaaaatcagaaatctagag 33674904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 9526084 - 9526335
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     
T  9526084 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacga 9526183  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||| ||||| ||||||||||||  ||||||||||||   ||   |||||||||||||||||||||||||||||||||||||||||||    
T  9526184 tggttgaagcaagatttctgggaagacactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 9526283  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  9526284 tttcagttagatttgtttcagttttttaagggtttactttccactataaata 9526335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 2232314 - 2232473
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||   ||||| ||            |||||||||||||    
T  2232314 agcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtc------------tcgcgctgaagat 2232401  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2232402 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 2232473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 9521419 - 9521589
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||||||| ||  ||||||||  ||||||||||||    | | |||| |||| ||||||||||||||||||    
T  9521419 agcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcgtgccacgatggccccgcatcgtgccaagatggtcgcgctgaagat 9521518  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||  |||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||    
T  9521519 aaaataaaaacgtattttcagttagatttgtttcagttttttaagggtttacttt-cactataaatacagcc 9521589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 2393845 - 2393763
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2393845 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 2393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 21353749 - 21353659
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaa-taaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |||| ||||||||||||||||    
T  21353749 gccacgatgggcgcgctgaagataaaaaataaaacgtattttcagttagatttgtttcagttttttaagggttttctttccactataaata 21353659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 51752071 - 51752152
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| || |||||| ||||||||    
T  51752071 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 51752152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 14098543 - 14098487
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14098543 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 14098487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 20302165 - 20302221
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20302165 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaga 20302221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 47179395 - 47179450
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47179395 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 47179450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 16228203 - 16228258
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16228203 catcatcactgatttgaagtcaaggtggagaattgtaagagttaacttaaaatcag 16228258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 28842200 - 28842255
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28842200 catcatcactgatttgaagtcaaggtggagaattgtgaaagttaacttaaaatcag 28842255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 2232261 - 2232311
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2232261 ttgtgagagttaacttaaaatcagaaatctggagcatcatgccacgatgga 2232311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 2401727 - 2401677
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2401727 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 2401677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 9521367 - 9521416
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 9521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 2617278 - 2617329
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2617278 attgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 2617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 28201980 - 28201926
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  28201980 catcatcgctgatttaaaatcaaggtggagaattgtgagagttaacttaaaatca 28201926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 21353857 - 21353808
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  21353857 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 21353808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 23689384 - 23689335
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  23689384 tgtgagagttaacttaaaatcaaaaatctagagaatcatgccacgatgga 23689335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 25133681 - 25133730
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||||||| | |||| |||||||||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaacgtgtcacgatgga 25133730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 20291280 - 20291328
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  20291280 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 20291328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 3320613 - 3320356
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgaga-gttaacttaaaatcagaaatctggagcatcgtgccacgatgga---------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                    
T  3320613 catcatcactgatttgaagtcaaggtggagaattgtgagaagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacg 3320514  T
Q  93 -----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgta 187  Q
         |||||||||||||||||| || |||||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||||||||||||||||    
T  3320513 atggttgaagcaagattcctgggaagccactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgta 3320414  T
Q  188 ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  3320413 ttttcagttagatttgtttcagttttataagggtttactttctactataaatacagcc 3320356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 25405013 - 25405269
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  25405013 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacga 25405112  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||    ||||||||||||   ||   |||||||||||||||||||||||||||||||||||||||||||    
T  25405113 tggttgaagcaagattcctgggaagacactggatttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 25405212  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  25405213 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 25405269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 7074407 - 7074663
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                     
T  7074407 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgtgccacga 7074506  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||||||||||||  ||||||||||||   |    ||||||||||||||||||||||||||||||||  |||||||||    
T  7074507 tggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtat 7074606  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  7074607 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 7074663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 3325275 - 3325104
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    |||||||  ||||||||| |||||||||||||||||| || |||||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  3325275 agcatcgcaccacgatggttgaagcaagattcctgggaagccactggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 3325176  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  3325175 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttctactataaatacagcc 3325104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 7069485 - 7069656
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||   |    ||||||||||||||||||||||||||||    
T  7069485 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagat 7069584  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||  |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  7069585 aaaataaaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 7069656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 30246607 - 30246691
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30246607 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 30246691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 25409768 - 25409852
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||    
T  25409768 gacatcatcactgatttgaagtcaaggtggagaattgtaaaagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 25409852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 34547249 - 34547176
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  34547249 tgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 34547176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 1047536 - 1047481
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047536 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 1047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 22136845 - 22136900
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22136845 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 22136900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 40551872 - 40551927
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40551872 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 40551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 48457441 - 48457535
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgat 137  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||| ||||  | |||  |||||||||||||||||||||||    
T  48457441 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgattgttgaagcaaaattctagagcaatcactggaaaaatcgtgccacgat 48457535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 30246750 - 30246839
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| |||||||||||||    ||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||    
T  30246750 gccacgatggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttcagttttttaagggtttactttccactataaata 30246839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 44513005 - 44512838
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||   || ||  |||||||   ||||||||||||   || | |||| |||||||||| ||||||||||||    
T  44513005 agcatcgcgccacgattgttgaagcaagattctgaggaagctactggaattttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagat 44512906  T
Q  174 aaaaataaaacgtattttcagtta-gatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |    ||||||||||||||||| | |||||||||||||||| || | |||||||||||||||||||||    
T  44512905 atttttaaaacgtattttcagtaaagatttgtttcagttttttaagggtttactttccactataaata 44512838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 44281 - 44335
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44281 catcatcattgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 44335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 7465035 - 7464980
Alignment:
Q  37 gagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7465035 gagaattgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 7464980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 25351057 - 25351223
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctg-ggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaaga 172  Q
    |||||||||||||||| | || |||||||| |||| || ||  |||||||   ||||||||||||   || | |||| ||||||||||   |||||||||    
T  25351057 agcatcgtgccacgattgttggagcaagat-cctgaggaagctactggaattttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaaga 25351155  T
Q  173 taaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||    |||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  25351156 tatttttaaaacatattttcagttagatttgtttcagttttttaagggtttactttccactataaata 25351223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 7069433 - 7069482
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgga 7069482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 25356856 - 25356917
Alignment:
Q  179 taaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  25356856 taaaacatattttcagttagatttgtttcagttttttaagggtttactttccactataaata 25356917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 25409939 - 25410000
Alignment:
Q  179 taaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  25409939 taaaacatattttcagttagatttgtttcagttttttaagggtttactttccactataaata 25410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 2120592 - 2120791
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgc 142  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||||| | |||||||| ||||   || ||   |||||||  |||| |||||||    |    
T  2120592 tgtgagagttaacttaaaatcagaattctggagtatcgcgccacgattggtgaagcaaaattctgaggaagtttctggaaatttcgtaccacgatggctc 2120691  T
Q  143 aggatcgcgccacgatggtcgcgctgaagataaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaatac 241  Q
     | |||| | ||||||||||||||||||||||    ||||||||| |||| ||  ||||||||||||||||| || | | ||||| ||||||||||||||    
T  2120692 cgtatcgtggcacgatggtcgcgctgaagatatttttaaaacgtattttttagcaagatttgtttcagttttttaag-ggttactctccactataaatac 2120790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 8378951 - 8378900
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8378951 attgtgagagttaacttaaaatcagaaatttggagaatcgtgccacgatgga 8378900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 34547373 - 34547324
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  34547373 tgtgagagttaacttaaaatcagaaatctggagaatcgtgtcacgatgga 34547324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 7464921 - 7464831
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttaga-tttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| |||||| |||||||   ||||||||||||||||  | | |||||||||||||| || | |||||||||||||||||||||    
T  7464921 gccacgatggacgcgctcaagataattttaaaacgtattttcagcaaaaatttgtttcagttttttaagggtttactttccactataaata 7464831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 25351005 - 25351054
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  25351005 tgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatgga 25351054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 25356699 - 25356748
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  25356699 tgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatgga 25356748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 40946076 - 40946121
Alignment:
Q  45 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||    
T  40946076 tgagagttaacttaaaatcagaattctgaagaatcgtgccacgatg 40946121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 44144438 - 44144389
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||| ||||| ||| | ||||||||||||||    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaacgtgccacgatgga 44144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 44513057 - 44513008
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||| || ||||||| || |||||||||||||    
T  44513057 tgtgagagttaacttaaaatcaaaattctggagaattgtgccacgatgga 44513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 3878322 - 3878370
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 3878370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 25452113 - 25452369
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga----------------- 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||                     
T  25452113 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaattagaaatatggagaatcgtgccacgatggagaagcatcgcgccacga 25452212  T
Q  93 ----tgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagataaaaataaaacgtat 188  Q
        |||||||||||||||||| ||  ||||||||  ||||||||||||   || |  ||| ||||||||||||||||||||||||||||||||||||||    
T  25452213 ttgatgaagcaagattcctgggaagctactggaaatttcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtat 25452312  T
Q  189 tttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  25452313 tttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 25452369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 1170516 - 1170687
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||| |||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  1170516 agcatcgcgccacaatggctgaagcaagattcctgggcagacactgaaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 1170615  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||    
T  1170616 aaaaataaaacgtattttcagttagatttgtttcagttttataagggtttactttctactataaatatagcc 1170687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 40222381 - 40222463
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40222381 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 40222463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 6747011 - 6747093
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6747011 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 6747093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 245
Target Start/End: Complemental strand, 2298476 - 2298309
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||  | |||||||||||||   || ||  |||||||||||||| ||| ||||  || |  ||| |||||||||||||||||||||||    
T  2298476 agcatcgcgccacgactgttgaagcaagattctgaggaagctactggaaaaatcgtaccatgataaagccgtgtcgtgccacgatggtcgcgctgaagat 2298377  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |    |||||||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||||||    
T  2298376 a----taaaacgtattttcagttagatttgttttagttttttaagggtttactttccactataaatacagcc 2298309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 35385854 - 35385765
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| || | |||||||||||||||||||||    
T  35385854 gccacgatggtcgcgctaaagataaaaataaaaagtattttcagtttgatttgtttcagttttttaagggtttactttccactataaata 35385765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 22672612 - 22672703
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcag--ttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| || | |||||||||||||||||||||    
T  22672612 gccacgatggtcgcgctgaagataaaaataaaatgtattttcagttagatttgtttcagttttttttaagggtttactttccactataaata 22672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 10756927 - 10756982
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10756927 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 10756982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 15355098 - 15355043
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15355098 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 15355043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 23667076 - 23667131
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23667076 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 23667131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 31544765 - 31544820
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31544765 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 31544820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 34477665 - 34477611
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34477665 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 34477611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 659680 - 659735
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  659680 catcatccctgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 659735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 20504485 - 20504430
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20504485 catcatcactgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcag 20504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 31466529 - 31466474
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31466529 catcatcactgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcag 31466474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 42237954 - 42238003
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 42238003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 1170470 - 1170513
Alignment:
Q  49 agttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1170470 agttaacttaaaatcagaaatctggagcatcgtgccacgatgga 1170513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 25445305 - 25445364
Alignment:
Q  184 cgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacag 243  Q
    |||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  25445305 cgtattttcagttagatttgtttcagttttttaagggtttaccttccactataaatacag 25445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 35385963 - 35385913
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  35385963 ttgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatgga 35385913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 1240078 - 1240127
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1240078 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgga 1240127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 10529638 - 10529592
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgat 89  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  10529638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 10529592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 22672503 - 22672553
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  22672503 ttgtgagagttaacttaaaattagaattctggagaatcgtgccacgatgga 22672553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 6744801 - 6744850
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  6744801 tgtgagagttaatttaaaatcagaattctggagaatcgtgccacgatgga 6744850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 25445219 - 25445268
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| ||||||    
T  25445219 tgtgagagttaacttaaaattagaaatctggagaatcgtaccatgatgga 25445268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 2298528 - 2298496
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggag 75  Q
    |||||||||||||||||||||||||||||||||    
T  2298528 tgtgagagttaacttaaaatcagaaatctggag 2298496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 6747189 - 6747262
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  6747189 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 6747262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 39854369 - 39854442
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  39854369 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 39854442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 4409796 - 4409844
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    |||||| ||||||||||||||||||  |||| || ||||||||||||||    
T  4409796 ttgtgaaagttaacttaaaatcagagttctgaagaatcgtgccacgatg 4409844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 11853254 - 11853425
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||||| |||||||||||||||||| ||||| ||||||  ||||||||||||   ||   ||||||||||||||||||||||||||||    
T  11853254 agcatcgcgccacgatggttgaagcaagattcctgggaagacattggaaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagat 11853353  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  11853354 aaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 11853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 4884496 - 4884580
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4884496 gacatcatcactgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 4884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 18586668 - 18586835
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    |||||||  ||||||| | |||||||||||||   || ||  ||||||||||| ||||||||||   || | |||| |||| ||||||||||||||||||    
T  18586668 agcatcgcaccacgattgttgaagcaagattctgaggaagctactggaaaaattgtgccacgatgaagccgcatcgtgccatgatggtcgcgctgaagat 18586767  T
Q  174 aaaaataaaacgtatttt-cagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||    
T  18586768 aaaaataaaacgtatttttcagttagatttgtttcagttttttaagggtttactttccactataaata 18586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 15316597 - 15316679
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15316597 catcatcactgatttgaagtcaaggtgaagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 15316679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 4569690 - 4569786
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctgg---agcatcgtgccacgatggatgaagcaagat 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||| ||||||||||| | |||| ||||||    
T  4569690 catcatcactaatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggaatctggagaagcaacgtgccacgattgttgaaacaagat 4569786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 11006816 - 11006759
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11006816 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 11006759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 9174717 - 9174662
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9174717 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 9174662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 16932393 - 16932338
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16932393 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 16932338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 36920158 - 36920103
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36920158 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 36920103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 16489125 - 16489219
Alignment:
Q  146 atcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||| |||||||||| || ||||||||||    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  16489125 atcgtgccacgatggacgtgctgaagatatttttaaaacgtattttcagttagatttgtttcagttttttaagagtttactttccactatgaata 16489219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 22044963 - 22044909
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22044963 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 22044909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 8528970 - 8529136
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgct-gaaga 172  Q
    ||||||| |||||||| | |||||||||||||   || ||  ||||||||||||||||||||||   || | |||| ||||||||||| ||| | |||||    
T  8528970 agcatcgcgccacgattgttgaagcaagattctgaggaagctactggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggt-gcgattgaaga 8529068  T
Q  173 taaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||    |||||| |||||||||||||||||||||||||||| || | || ||||||||||||||||||    
T  8529069 tatttttaaaacatattttcagttagatttgtttcagttttttaagggtatactttccactataaata 8529136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 22780985 - 22780930
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22780985 catcatcactaatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 22780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 24880225 - 24880280
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24880225 catcatcactgatttgaagtcaaggtggagaattgtgaaagttaacttaaaatcag 24880280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 3825145 - 3825064
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||   |||| || |||||| ||||||||    
T  3825145 catcatcactgatttgaagtcaaggttgacaattgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 3825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 15316738 - 15316827
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||| |||||||||||||    ||||||||||||||||| |||||||||| |||||| || | |||||||||||||||||||||    
T  15316738 gccacgatggacgcgctgaagatatttttaaaacgtattttcagtcagatttgtttaagttttttaagggtttactttccactataaata 15316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 15830949 - 15831010
Alignment:
Q  179 taaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  15830949 taaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 15831010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 31300217 - 31300293
Alignment:
Q  165 gctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| || | | |||||||||||||||||||    
T  31300217 gctgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggggttactttccactataaata 31300293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 15311992 - 15312043
Alignment:
Q  41 attgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15311992 attgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 15312043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 4556446 - 4556372
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| || | | |||||||||||||||||||    
T  4556446 tgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggggttactttccactataaata 4556372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 16638517 - 16638571
Alignment:
Q  11 atcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  16638517 atcatcactcatttgaagtcaaggtggagaattgtgagagttaacataaaatcag 16638571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 18586615 - 18586665
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18586615 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 18586665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 31300073 - 31300123
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31300073 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 31300123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 11853202 - 11853251
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatgga 11853251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 16489001 - 16489050
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16489001 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 16489050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 40636920 - 40637086
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | |||||||||||||   || ||  ||||||||  ||||||||||||   || | |||| |||||||||| ||||||||||||    
T  40636920 agcatcgcgccacgattgttgaagcaagattctgaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagat 40637019  T
Q  174 aaaaataaaacgtatttt-cagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    |    ||||||||||||| |||| ||||||||||||||||| || | | ||||||| |||||||||||    
T  40637020 atttttaaaacgtatttttcagtcagatttgtttcagttttttaagggattacttt-cactataaata 40637086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 15312105 - 15312191
Alignment:
Q  154 acgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||| |||||||||||||    || |||||||||||||| | ||||||||||||||| || | |||||||||||||||||||||    
T  15312105 acgatggacgcgctgaagatatttttataacgtattttcagtcatatttgtttcagttttttaagggtttactttccactataaata 15312191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 15830817 - 15830862
Alignment:
Q  47 agagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15830817 agagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 15830862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22048598 - 22048554
Alignment:
Q  20 gatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  22048598 gatttgaagtcaagttggagaattgtgagagttaacttaaaatca 22048554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 6764654 - 6764701
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  6764654 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatg 6764701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 47868195 - 47868242
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  47868195 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatg 47868242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 4556586 - 4556536
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  4556586 ttgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatgga 4556536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 8631958 - 8631913
Alignment:
Q  47 agagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  8631958 agagttaacttaaaatcagaattctggagaatcgtgccacgatgga 8631913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 16689472 - 16689423
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  16689472 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatgga 16689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 26086292 - 26086243
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  26086292 tgtgagagttaacttaaaatcagaattctagagaatcgtgccacgatgga 26086243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 40636868 - 40636917
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatgga 40636917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 22801396 - 22801354
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagtt 52  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  22801396 catcttcactgatttgaagtcaaggtagagaattgtgagagtt 22801354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 8528918 - 8528967
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||  ||||||| |||||| |||||||||    
T  8528918 tgtgagagttaacttaaaatcagatttctggagaatcgtgtcacgatgga 8528967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 8631817 - 8631744
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  8631817 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 8631744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 47868340 - 47868413
Alignment:
Q  167 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||| | |  ||||||||||||||||| || | | ||||||| |||||||||||    
T  47868340 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaata 47868413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 47747342 - 47747370
Alignment:
Q  14 atcactgatttgaagtcaaggtggagaat 42  Q
    |||||||||||||||||||||||||||||    
T  47747342 atcactgatttgaagtcaaggtggagaat 47747370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 30845 - 31017
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||| ||||| |||||||||||||||||| ||  ||||||||||||||||||||||   ||||| ||| ||||||||||||||| |||||||    
T  30845 agcatcgcgccaggatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgttgaagat 30944  T
Q  174 aaaaataaaacgta-ttttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  30945 aaaaataaaatgtatttttcagttagatttgtttcagttttataagggtttactttccactataaatacagcc 31017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 30795 - 30842
Alignment:
Q  45 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30795 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 30842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 16028 - 16199
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgatactgcaggatcgcgccacgatggtcgcgctgaagat 173  Q
    ||||||| |||||||| | ||||||||| |||||||| ||  ||| ||||  ||||||||||||    | | |||| |||||||||||||||||||||||    
T  16028 agcatcgcgccacgattgttgaagcaagcttcctgggaagctactagaaatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctgaagat 16127  T
Q  174 aaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||  |||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  16128 aaaataaaaacgtatttttagttagatttgtttcagttttttaagggtttactttccactataaatacagcc 16199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 15976 - 16025
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15976 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 16025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 1075 - 1157
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1075 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatgga 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 1216 - 1310
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |  | |||||||||||| |||||||||||||    
T  1216 gccacgatggtcgcgctgaagataaaataaaaacgtattttcagttagatttgtttcagttttttgagggtttactttccaatataaatacagcc 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 17388 - 17299
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  17388 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggtttactttccactataaata 17299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 17497 - 17450
Alignment:
Q  42 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgat 89  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17497 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgat 17450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 224601 - 224695
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagttagatttgtttcagttttatatgagtttactttccactataaatacagcc 245  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||    
T  224601 gccacgatgatcgcgttgaagataaaaataaaacgtattttcagttagatttgtttcagttttttaagggttttctttccactataaatacagcc 224695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 224545 - 224608
Alignment:
Q  74 agcatcgtgccacgatggatgaagcaagattcctgggcagacactggaaaaatcgtgccacgat 137  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||    
T  224545 agcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgat 224608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 224510 - 224542
Alignment:
Q  60 aatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||| ||||||||||||||||    
T  224510 aatcagaaatctggagtatcgtgccacgatgga 224542  T

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Target: scaffold0140 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 24157 - 24212
Alignment:
Q  10 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24157 catcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 24212  T

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Target: scaffold0025 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 69868 - 69785
Alignment:
Q  8 gacatcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgg 91  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |||| || |||||| ||||||||    
T  69868 gacatcatcactgatttgaagtcaaagtggagaattgtaagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 69785  T

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Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 188645 - 188555
Alignment:
Q  151 gccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttatatgagtttactttccactataaata 240  Q
    ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| || | |||||||||||||||||||||    
T  188645 gccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaata 188555  T

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Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 188753 - 188704
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  188753 tgtgagagttaacttaaaattagaaatctggagaatcgtgctacgatgga 188704  T

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Target: scaffold0250 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 2597 - 2650
Alignment:
Q  11 atcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2597 atcatcactgatttgaagtcaaggtggagaattgtgagagttaacttaaaatca 2650  T

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Target: scaffold0552 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 1349 - 1302
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatg 90  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1349 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatg 1302  T

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Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 42022 - 41973
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatgga 92  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  42022 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatgga 41973  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 120569 - 120609
Alignment:
Q  43 tgtgagagttaacttaaaatcagaaatctggagcatcgtgc 83  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  120569 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 120609  T

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