View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7859_low_4 (Length: 382)

Name: NF7859_low_4
Description: NF7859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7859_low_4
NF7859_low_4
[»] chr3 (30 HSPs)
chr3 (65-368)||(214390-214692)
chr3 (65-360)||(15674133-15674431)
chr3 (64-367)||(31650245-31650549)
chr3 (65-360)||(8225650-8225944)
chr3 (66-360)||(18477661-18477954)
chr3 (65-367)||(25019954-25020260)
chr3 (64-351)||(11656878-11657161)
chr3 (64-161)||(17042054-17042151)
chr3 (19-131)||(6578752-6578866)
chr3 (94-228)||(13920204-13920338)
chr3 (94-227)||(13914480-13914613)
chr3 (94-143)||(7478509-7478558)
chr3 (64-161)||(7495242-7495339)
chr3 (113-169)||(286243-286299)
chr3 (113-163)||(6578892-6578942)
chr3 (113-161)||(979724-979772)
chr3 (113-161)||(3551822-3551870)
chr3 (113-161)||(13514961-13515009)
chr3 (113-161)||(18063550-18063598)
chr3 (118-161)||(7028419-7028462)
chr3 (113-163)||(18482716-18482766)
chr3 (88-161)||(3444372-3444444)
chr3 (191-228)||(7478602-7478639)
chr3 (113-154)||(28051913-28051954)
chr3 (89-161)||(21253314-21253388)
chr3 (51-108)||(15572242-15572297)
chr3 (113-163)||(20626986-20627036)
chr3 (191-228)||(7495369-7495406)
chr3 (320-365)||(7495501-7495546)
chr3 (118-163)||(21547549-21547594)
[»] chr6 (40 HSPs)
chr6 (19-360)||(28624379-28624721)
chr6 (19-154)||(24542429-24542564)
chr6 (65-231)||(28622904-28623070)
chr6 (86-360)||(20559163-20559436)
chr6 (113-365)||(20764346-20764600)
chr6 (64-366)||(21316889-21317193)
chr6 (64-183)||(34639503-34639619)
chr6 (97-236)||(18152086-18152225)
chr6 (191-351)||(34648453-34648615)
chr6 (113-161)||(19077911-19077959)
chr6 (269-348)||(28623080-28623160)
chr6 (113-204)||(30425607-30425698)
chr6 (64-161)||(16308664-16308762)
chr6 (118-163)||(25806174-25806219)
chr6 (113-161)||(12385201-12385249)
chr6 (117-168)||(11961230-11961281)
chr6 (118-161)||(13196092-13196135)
chr6 (118-161)||(19894016-19894059)
chr6 (113-163)||(12039053-12039103)
chr6 (113-161)||(15930191-15930239)
chr6 (113-161)||(17235362-17235410)
chr6 (113-161)||(19598449-19598497)
chr6 (64-139)||(20764256-20764332)
chr6 (113-161)||(23882041-23882089)
chr6 (113-161)||(25970445-25970493)
chr6 (113-161)||(25974885-25974933)
chr6 (118-161)||(23879653-23879696)
chr6 (320-365)||(16308924-16308969)
chr6 (113-161)||(21722751-21722799)
chr6 (118-161)||(8465015-8465058)
chr6 (89-161)||(17868242-17868316)
chr6 (89-161)||(17878025-17878099)
chr6 (65-142)||(26964805-26964881)
chr6 (118-161)||(33666559-33666602)
chr6 (97-158)||(15002510-15002571)
chr6 (191-228)||(16308792-16308829)
chr6 (320-365)||(21727702-21727747)
chr6 (191-228)||(21727842-21727879)
chr6 (128-161)||(29253039-29253072)
chr6 (113-161)||(13869745-13869793)
[»] chr2 (16 HSPs)
chr2 (65-360)||(24311148-24311446)
chr2 (60-366)||(31588041-31588349)
chr2 (64-360)||(36397787-36398082)
chr2 (59-360)||(24312934-24313232)
chr2 (126-360)||(26859346-26859582)
chr2 (52-174)||(27108198-27108320)
chr2 (87-228)||(27111733-27111874)
chr2 (86-228)||(19197649-19197791)
chr2 (86-149)||(20645610-20645673)
chr2 (113-161)||(15329088-15329136)
chr2 (113-161)||(21249541-21249589)
chr2 (118-161)||(24789507-24789550)
chr2 (94-213)||(25347858-25347977)
chr2 (290-360)||(24311546-24311617)
chr2 (51-108)||(23759492-23759547)
chr2 (118-166)||(20475937-20475985)
[»] chr8 (19 HSPs)
chr8 (98-368)||(23863622-23863894)
chr8 (70-368)||(24849465-24849757)
chr8 (113-360)||(12813954-12814202)
chr8 (30-129)||(9997340-9997441)
chr8 (51-123)||(23867557-23867629)
chr8 (113-161)||(18622429-18622477)
chr8 (97-228)||(1684656-1684787)
chr8 (86-149)||(12813887-12813950)
chr8 (118-163)||(26537053-26537098)
chr8 (88-179)||(12376211-12376302)
chr8 (51-161)||(23250485-23250595)
chr8 (119-161)||(20254226-20254268)
chr8 (65-142)||(9997555-9997632)
chr8 (97-158)||(17880088-17880149)
chr8 (113-161)||(9997265-9997312)
chr8 (121-161)||(22485901-22485941)
chr8 (113-161)||(23540750-23540798)
chr8 (113-161)||(27924796-27924844)
chr8 (113-161)||(33962501-33962549)
[»] chr7 (41 HSPs)
chr7 (50-365)||(24814654-24814972)
chr7 (65-360)||(26193635-26193932)
chr7 (53-360)||(23174035-23174334)
chr7 (128-360)||(15708926-15709162)
chr7 (65-360)||(19295317-19295615)
chr7 (118-334)||(23297079-23297297)
chr7 (65-237)||(10252065-10252237)
chr7 (64-365)||(23579259-23579563)
chr7 (19-142)||(10661693-10661817)
chr7 (65-214)||(19353830-19353979)
chr7 (51-166)||(9567653-9567768)
chr7 (94-160)||(14688081-14688147)
chr7 (63-228)||(4793891-4794056)
chr7 (94-166)||(4541988-4542060)
chr7 (65-132)||(15711758-15711825)
chr7 (118-161)||(12326580-12326623)
chr7 (286-360)||(7509005-7509078)
chr7 (20-142)||(10661932-10662053)
chr7 (113-171)||(26132298-26132355)
chr7 (112-161)||(10661630-10661679)
chr7 (113-161)||(20992311-20992359)
chr7 (113-161)||(21261198-21261246)
chr7 (113-161)||(23082119-23082167)
chr7 (113-161)||(23960793-23960841)
chr7 (118-161)||(14927413-14927456)
chr7 (118-161)||(15350879-15350922)
chr7 (113-163)||(42636972-42637022)
chr7 (320-365)||(9564857-9564902)
chr7 (320-365)||(9567451-9567496)
chr7 (63-158)||(12560529-12560625)
chr7 (113-161)||(16207224-16207272)
chr7 (118-161)||(20924455-20924498)
chr7 (124-166)||(9893425-9893467)
chr7 (119-161)||(10280612-10280654)
chr7 (113-163)||(29545484-29545534)
chr7 (320-365)||(4794150-4794195)
chr7 (86-143)||(23297312-23297369)
chr7 (113-161)||(4459507-4459555)
chr7 (118-162)||(11520759-11520803)
chr7 (59-154)||(11559814-11559910)
chr7 (113-149)||(16221916-16221952)
[»] chr5 (24 HSPs)
chr5 (64-362)||(22183612-22183912)
chr5 (87-360)||(24118108-24118383)
chr5 (216-360)||(9523379-9523526)
chr5 (83-228)||(20740296-20740441)
chr5 (65-156)||(17660759-17660850)
chr5 (94-161)||(20127707-20127774)
chr5 (113-161)||(22082034-22082082)
chr5 (113-161)||(23624609-23624657)
chr5 (115-163)||(23757602-23757650)
chr5 (115-163)||(23823058-23823106)
chr5 (113-161)||(30605034-30605082)
chr5 (118-161)||(22251389-22251432)
chr5 (320-365)||(22130414-22130459)
chr5 (118-167)||(38406123-38406172)
chr5 (113-161)||(18221878-18221926)
chr5 (113-161)||(26037545-26037593)
chr5 (60-158)||(17920100-17920199)
chr5 (118-161)||(24190631-24190674)
chr5 (113-163)||(23419900-23419950)
chr5 (122-159)||(9421868-9421905)
chr5 (320-365)||(20740543-20740588)
chr5 (52-108)||(22251278-22251332)
chr5 (118-163)||(22404109-22404154)
chr5 (97-158)||(34404783-34404844)
[»] chr4 (31 HSPs)
chr4 (18-360)||(10722854-10723195)
chr4 (18-360)||(10936623-10936964)
chr4 (113-364)||(16654678-16654932)
chr4 (65-262)||(49974915-49975111)
chr4 (65-348)||(16616525-16616809)
chr4 (18-199)||(10682977-10683155)
chr4 (18-199)||(10896617-10896795)
chr4 (65-366)||(10197541-10197844)
chr4 (67-360)||(21478978-21479261)
chr4 (23-163)||(33744237-33744377)
chr4 (18-179)||(10718225-10718382)
chr4 (18-179)||(10931994-10932151)
chr4 (64-156)||(33746693-33746785)
chr4 (64-228)||(31971615-31971779)
chr4 (65-149)||(16654590-16654674)
chr4 (86-149)||(18006071-18006134)
chr4 (68-142)||(9069775-9069851)
chr4 (83-161)||(2680503-2680581)
chr4 (113-161)||(9069712-9069760)
chr4 (118-161)||(18601008-18601051)
chr4 (118-169)||(41786193-41786244)
chr4 (113-154)||(15623211-15623252)
chr4 (113-161)||(10724965-10725013)
chr4 (113-161)||(10938734-10938782)
chr4 (59-158)||(11324579-11324679)
chr4 (113-161)||(19183025-19183073)
chr4 (118-161)||(15699684-15699727)
chr4 (97-155)||(15687049-15687107)
chr4 (51-108)||(16384758-16384813)
chr4 (118-158)||(11905837-11905877)
chr4 (320-360)||(31971480-31971520)
[»] scaffold0008 (2 HSPs)
scaffold0008 (65-360)||(41179-41478)
scaffold0008 (24-231)||(36252-36463)
[»] chr1 (27 HSPs)
chr1 (113-365)||(51471434-51471687)
chr1 (18-161)||(12753828-12753971)
chr1 (64-183)||(22347920-22348036)
chr1 (65-214)||(8282635-8282784)
chr1 (171-360)||(47940373-47940563)
chr1 (19-81)||(47940306-47940368)
chr1 (64-149)||(51471345-51471430)
chr1 (113-161)||(10339502-10339550)
chr1 (311-360)||(17355367-17355416)
chr1 (65-166)||(18379388-18379489)
chr1 (113-158)||(20200432-20200477)
chr1 (52-161)||(22891080-22891192)
chr1 (118-161)||(26971746-26971789)
chr1 (113-163)||(11667246-11667296)
chr1 (130-256)||(15914804-15914930)
chr1 (311-360)||(17379159-17379208)
chr1 (47-161)||(18389392-18389509)
chr1 (113-161)||(20840607-20840655)
chr1 (113-161)||(23477279-23477327)
chr1 (113-161)||(24986751-24986799)
chr1 (50-108)||(20200324-20200380)
chr1 (97-158)||(11085009-11085070)
chr1 (112-161)||(25349571-25349620)
chr1 (97-158)||(33063133-33063194)
chr1 (113-161)||(1626341-1626389)
chr1 (89-142)||(23477209-23477264)
chr1 (63-158)||(45598645-45598741)
[»] scaffold0064 (2 HSPs)
scaffold0064 (65-179)||(45263-45377)
scaffold0064 (59-179)||(52231-52351)
[»] scaffold0520 (2 HSPs)
scaffold0520 (97-256)||(5639-5799)
scaffold0520 (97-207)||(11944-12054)
[»] scaffold0505 (2 HSPs)
scaffold0505 (120-348)||(9393-9623)
scaffold0505 (86-142)||(9317-9373)
[»] scaffold0034 (2 HSPs)
scaffold0034 (64-228)||(50204-50368)
scaffold0034 (320-365)||(73799-73844)
[»] scaffold0480 (1 HSPs)
scaffold0480 (50-166)||(11943-12059)
[»] scaffold0338 (1 HSPs)
scaffold0338 (191-360)||(9952-10123)
[»] scaffold1001 (2 HSPs)
scaffold1001 (113-161)||(730-778)
scaffold1001 (63-115)||(822-874)
[»] scaffold0129 (1 HSPs)
scaffold0129 (118-161)||(16273-16316)
[»] scaffold0190 (1 HSPs)
scaffold0190 (113-161)||(15964-16012)
[»] scaffold0185 (1 HSPs)
scaffold0185 (113-161)||(1711-1759)
[»] scaffold0423 (1 HSPs)
scaffold0423 (51-142)||(14348-14439)
[»] scaffold0103 (2 HSPs)
scaffold0103 (118-161)||(25026-25069)
scaffold0103 (51-108)||(24914-24969)
[»] scaffold0069 (1 HSPs)
scaffold0069 (120-161)||(9442-9483)
[»] scaffold0035 (1 HSPs)
scaffold0035 (112-160)||(38074-38122)
[»] scaffold0226 (1 HSPs)
scaffold0226 (113-163)||(6882-6933)
[»] scaffold0059 (1 HSPs)
scaffold0059 (118-161)||(47739-47782)
[»] scaffold0359 (1 HSPs)
scaffold0359 (51-108)||(2757-2812)
[»] scaffold0088 (1 HSPs)
scaffold0088 (119-161)||(37358-37400)
[»] scaffold0006 (1 HSPs)
scaffold0006 (113-161)||(88514-88562)


Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 65 - 368
Target Start/End: Original strand, 214390 - 214692
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  214390 tgttgggtatttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtct 214489  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctggg 264  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  214490 tgtt--tgtggcttggttttcgcgaactttatctttttaaggaaaccccgacttatttcttgttcaccaagtaacatatttttgtccaaaatcagctggg 214587  T
Q  265 t-atttatttttaaaatatagcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatatttatt 363  Q
    | |||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  214588 tgatttatttctaaaatatagcaatattttaggactcattggcggtgtgtttgacggttcctaaagatgttcctactttttaggagttgctatatttgtt 214687  T
Q  364 actat 368  Q
    |||||    
T  214688 actat 214692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 65 - 360
Target Start/End: Original strand, 15674133 - 15674431
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||    
T  15674133 tgttgggtatttgagtattgacttcattgttgctaaaacaaatactcatgtaagatgttggatacgatgtcccaacatcttggcacagttcagtgtgccc 15674232  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctggg 264  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  15674233 tatttgtgtggcttggttttcgcgaactttatcttttcaaggaaaccacagcttatttcttgttcaccaagtaacatatttttgtccagaatcagctgga 15674332  T
Q  265 t-atttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||| ||  |||| ||||| ||||||||||||||||||||||| || ||||||   |||||||||||||||| ||||||||||||||||||||||||    
T  15674333 tgatttgttcctaaagtatagacaatattttaggattccttggtgatgttgtttggttgttcctaaagatgttcctactttttaggagttgctatattt 15674431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 64 - 367
Target Start/End: Complemental strand, 31650549 - 31650245
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| |    
T  31650549 ttgttgggtatttgagtattggcttcattgttgcaaaaacaaatactcttgtatgatgttggatacgacgttccaacatcttggcaccgttcagtgtgcc 31650450  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg 263  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||| |  ||||||||||||||||||||||| |||||||| ||||| ||||||    
T  31650449 ctgtttgtgtggcttggttttcgcgagttttatctttttaaggaaactacgccaaatttcttgttcaccaagtaacatgtttttgtcaagaatcagctgg 31650350  T
Q  264 gt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattta 361  Q
    || |||| ||  |||| ||||| ||||||||||||||| |||| | |||| ||||   |||||||||||||||| |||||||||| |||||||||||||     
T  31650349 gtgatttgttcctaaagtatagacaatattttaggatttcttgat-gtgtttttggtagttcctaaagatgttcttactttttagaagttgctatatttg 31650251  T
Q  362 ttacta 367  Q
    ||||||    
T  31650250 ttacta 31650245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 65 - 360
Target Start/End: Complemental strand, 8225944 - 8225650
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||| ||| || ||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||    
T  8225944 tgttgggtatttgggtattggcttcatttttgctaaaacaaatactcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccc 8225848  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg- 263  Q
    | ||| ||||||||||||| ||| |  |||||||| |||| |||||| || | |||||||||||||||||| ||||  ||||| |||||||| ||||||     
T  8225847 tatttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacacgtttttctccagaatcagctgga 8225748  T
Q  264 gtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
      |||| ||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | ||||||    
T  8225747 aaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatattt 8225650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 66 - 360
Target Start/End: Complemental strand, 18477954 - 18477661
Alignment:
Q  66 gttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcct 165  Q
    ||||||||||||  || || |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||    
T  18477954 gttgggtatttggatattggcttcattgttgctaaaacaaatactcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccct 18477858  T
Q  166 gtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg-g 264  Q
    |||| ||||||||||||| ||| | ||||||||| |||||||||||||| | ||||||||||||||||||||     |||||||||||||| | ||||      
T  18477857 gtttatgtggcttggtttacgcaatctttatcttattaaggaaaccacgccctatttcttgttcaccaagtagtgcgtttttgtccagaatcaactggaa 18477758  T
Q  265 tatttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
     |||| ||| |||||||| | ||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| | ||||||    
T  18477757 gatttgtttctaaaatataaacaatatttttggattccttggtggtgtgtttggtggttcctaaagatgttcctactttttaggagttaccatattt 18477661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 65 - 367
Target Start/End: Complemental strand, 25020260 - 25019954
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||  ||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |     
T  25020260 tgttgggtatttaggtattggcctcattgttgttaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttgccacggtttagtgtgcct 25020161  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatct-ttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg 263  Q
    ||||||||||||||||||| | ||| |||||||| ||||||| |||||||  |||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  25020160 tgtttgtgtggcttggtttacacgagctttatcttttttaagaaaaccacaccttatttcttgttcaccaagtaacgtatttttctccagaatcagctgg 25020061  T
Q  264 -gtatttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
       |||| || ||||| ||||| ||| | |||||||||||||||||||| | |||| ||||||||||| | | |||||||||||||||||||  ||||||    
T  25020060 ccgattttttcttaaagtatagacaacaatttaggattccttggtggtgttatttggcggttcctaaaaacgatcatactttttaggagttgtcatattt 25019961  T
Q  361 attacta 367  Q
     ||||||    
T  25019960 gttacta 25019954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 351
Target Start/End: Complemental strand, 11657161 - 11656878
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||| ||| |  ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| |||||||||| |||||    
T  11657161 ttgttgggtatttgggtattagcttcattgttgctaaaataaatactcatgtatg---ttggatacgatgttccaacatcttgacacggttcagcgtgtc 11657065  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg 263  Q
     || || ||||||||||||| ||| | ||||||||| ||||||||| |||| | |||||||||||||||||| | |   |||||||||| ||| ||||||    
T  11657064 atggttatgtggcttggtttacgcaatctttatcttattaaggaaatcacgccctatttcttgttcaccaagcagcgcgtttttgtccaaaatcagctgg 11656965  T
Q  264 -gtatttatttttaaaatatagcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagtt 351  Q
       |||| ||| ||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||    
T  11656964 aagatttgtttctaaaatat--caatattttaggattccttggtgatgtgtttggcggttcctaaagatgttcctacattttaggagtt 11656878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 17042054 - 17042151
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  17042054 ttgttgggtatttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccgacatcctggcacggttcagtgtg 17042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 6578752 - 6578866
Alignment:
Q  19 atggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatg--ta 116  Q
    ||||||||| || |||||| |||||||||||| |||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||||||  |     
T  6578752 atggcctcaatttgttttatcaacaaataaattcaaagggggagattgttggctatttgagtattggcttcattgttgctaaaacaaatactcatgtttg 6578851  T
Q  117 tgatgttggatacga 131  Q
    |||||||||||||||    
T  6578852 tgatgttggatacga 6578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 13920338 - 13920204
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactt 193  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||| | |||| |||||||||| ||||    |||| |  | |||  ||   |||    
T  13920338 ttgctaaaacaaatattcatgtgtgatgttggatacgatgttctaacatcctagcacagttcagtgtgccctgaagttgtgccaagatttatgcacgctt 13920239  T
Q  194 tatctttttaaggaaaccacgacttatttcttgtt 228  Q
    |||||||||| |||||||||| |||||||||||||    
T  13920238 tatctttttatggaaaccacgccttatttcttgtt 13920204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 13914613 - 13914480
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactt 193  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||| |||| | |||| |||||||||| ||||    |||| |  | |||  ||   |||    
T  13914613 ttgctaaaataaatattcatgtgtgatgttggatacgatgttccatcatcctagcacagttcagtgtgccctgaagttgtgccaagatttatgcacgctt 13914514  T
Q  194 tatctttttaaggaaaccacgacttatttcttgt 227  Q
    ||||||||||||||||||||| ||||||||||||    
T  13914513 tatctttttaaggaaaccacgccttatttcttgt 13914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 7478509 - 7478558
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatc 143  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7478509 ttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 7478558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 7495242 - 7495339
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||||| |||||| ||  || ||||| | ||||||||||||||| |||||| |||||||||||||| |||| ||||||| | |||| ||||||||||    
T  7495242 ttgttggatatttgtgtgttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgttgttacaacatcctagcacagttcagtgtg 7495339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 286243 - 286299
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgttt 169  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  286243 tgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtgtcttgttt 286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 6578892 - 6578942
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  6578892 tgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtgtc 6578942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 979724 - 979772
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  979724 tgtaagatgttggatatgatgttccaacatctcggcacggttcagtgtg 979772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 3551822 - 3551870
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  3551822 tgtaagatgttggatatgatgttccaacatcgtggcacggttcagtgtg 3551870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 13514961 - 13515009
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  13514961 tgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtg 13515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 18063550 - 18063598
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  18063550 tgtaagatgttggatacgacgttccaacatcctggcacggttcagtgtg 18063598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 7028419 - 7028462
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  7028419 gatgttggatacgatgctccaacattttggcacggttcagtgtg 7028462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 18482716 - 18482766
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  18482716 tgtaagatgttggatacgatgtttcaacatcctgacacggttcagtgtgtc 18482766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 3444372 - 3444444
Alignment:
Q  88 tcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||| ||||||||| ||||| ||||| | |||||||||||||||||||| ||||  ||| |||||||||||||    
T  3444372 tcattattgctaaaataaatattcatgcaagatgttggatacgatgttcctacat-gtggtacggttcagtgtg 3444444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 7478602 - 7478639
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7478602 ctttatctttttaaggaaaccacgccttatttcttgtt 7478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 28051954 - 28051913
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggtt 154  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  28051954 tgtaagatgttggatacgatgttccaacatcctggcacggtt 28051913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 21253314 - 21253388
Alignment:
Q  89 cattgttgctaaaacaaatactcatgtatga--tgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||  ||||| ||   |||| ||||||||||||||||||| || ||||||||||||||    
T  21253314 cattattgctaaaacaaatatccatgtttgtgttgttagatacgatgttccaacatcctgacacggttcagtgtg 21253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 15572242 - 15572297
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    ||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  15572242 ccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 15572297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 20626986 - 20627036
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| ||| |||||||| ||||||||||||| |||||||||| ||||||||    
T  20626986 tgtaagatattggatacaatgttccaacatcctggcacggtttagtgtgtc 20627036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 7495369 - 7495406
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  7495369 ctttatctttttaaggaaaccacgcattatttcttgtt 7495406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 7495501 - 7495546
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||    
T  7495501 gttcctaaagatgttcctactttttaggagtttccatatttgttac 7495546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 21547594 - 21547549
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||||||||||||||| || || ||| ||||||||||||    
T  21547594 gatgttggatacgatgttccaacttcctgacacagttcagtgtgtc 21547549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 19 - 360
Target Start/End: Complemental strand, 28624721 - 28624379
Alignment:
Q  19 atggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatg 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28624721 atggcctcagtttgttttaacaacaaataaatccaaaggcggagattgttggatatttgagtaatgacttcattgttgctaaaacaaatactcatgtatg 28624622  T
Q  119 atgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgactt 218  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||| | |||||| || |||||||||||||  | |    
T  28624621 atgttggatacgacgtttcaacatcttggcacggttcagtgtgtcctgtttatgttgcttggtttacgcaatctttattttattaaggaaaccacaccct 28624522  T
Q  219 atttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttg 316  Q
    ||||||||||||| ||||| | || ||||||||||||| |||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  28624521 atttcttgttcacaaagtaccgta-ttttgtccagaatcagctgggtgatttgtttctaaaatatagacaatattttaggattccttggtggtgtgtttg 28624423  T
Q  317 acggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
     ||||| |||||||||||  ||||||||||||||| | ||||||    
T  28624422 gcggtttctaaagatgtttctactttttaggagttaccatattt 28624379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 24542564 - 24542429
Alignment:
Q  19 atggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatg 118  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  24542564 atggcctcagtttgttttaacaacaaataaatccaaagggggagattgttggatatttgagtattgacttcattgttgctaaaacaaatactcatgtatg 24542465  T
Q  119 atgttggatacgatgttccaacatcttggcacggtt 154  Q
    ||||||||||||||||||||||||  ||||||||||    
T  24542464 atgttggatacgatgttccaacattctggcacggtt 24542429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 28622904 - 28623070
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||| ||    
T  28622904 tgttaggtatttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgctggatattatgttctaacatcttggcacggttcagtgtgccc 28623003  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcac 231  Q
    ||||| |||||||||||||  || | |||||| || |||||||||||||| | ||||||||||||||    
T  28623004 tgtttatgtggcttggtttatgcaatctttattttattaaggaaaccacgccctatttcttgttcac 28623070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 360
Target Start/End: Complemental strand, 20559436 - 20559163
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttc 185  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||||| ||| |    
T  20559436 cttcattgttgctaaaacaaatactcatgtatg---ttggatacgatgttctagtatcttggcacggttcagtgtgccctgtttatgtggcttgatttgc 20559340  T
Q  186 gcgaactttatctttttaaggaaaccacgact-tatttcttgttcaccaagtaacatatttttgtccagaattagctgg-gtatttatttttaaaatat- 282  Q
    || | | ||||||| ||||||||||||| ||| |||||||||||||||||| | |   |||||||||| ||| ||||||   |||| ||| ||||||||     
T  20559339 gcaatccttatcttattaaggaaaccac-actatatttcttgttcaccaagcatcgcgtttttgtccaaaatcagctggaagatttgtttctaaaatata 20559241  T
Q  283 agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||| |||||| |||||||| |||||||||||  ||||||||||||||||| | ||||||| ||||| | ||||||    
T  20559240 aacaatgttttagaattccttgttggtgtgtttggtggttcctaaagatgttcctgctttttatgagttaccatattt 20559163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 113 - 365
Target Start/End: Original strand, 20764346 - 20764600
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaacca 212  Q
    |||| |||||||||||  ||||| ||||||| ||||| ||||||||||| | || || ||||||||||||||| ||  ||||| ||||||||||||||||    
T  20764346 tgtacgatgttggatataatgtttcaacatcctggcaaggttcagtgtgccttggttttgtggcttggttttcacgcgctttaactttttaaggaaacca 20764445  T
Q  213 cgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatat-agcaatattttaggattccttggtggtg 310  Q
    || ||||| |||||||||||||||| | ||||||||||||||||   |||||| |||| ||| |||| ||| |   ||||||||||||||||||||| ||    
T  20764446 cgccttatctcttgttcaccaagtatcgtatttttgtccagaatattctgggtgatttgtttctaaagtataaattatattttaggattccttggtgctg 20764545  T
Q  311 tgtttgacggttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    | ||||  ||||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  20764546 tttttggtggttcctaaagatgttcctacttcttaggaattgctatatttgttac 20764600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 64 - 366
Target Start/End: Original strand, 21316889 - 21317193
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||||||  || || ||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||| |||||  |||||||||| |    
T  21316889 ttgttgggtatttg--tattggcttcattattgctaaaacaaatattcttgtatgatgttggatatgatgttccaacatcctggcatagttcagtgtgcc 21316986  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatt-tcttgttcaccaagtaacatatttttgtccagaattagct- 261  Q
    |||||||||||| ||| ||||||  | |||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||| ||||| ||| ||||     
T  21316987 ctgtttgtgtggattgtttttcggaagctttatctatttcaggaaaccacgcctttttctcttgttcaccaagtaacatattttcgtccataatcagcta 21317086  T
Q  262 gggtatttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacg--gttcctaaagatgttcatactttttaggagttgctatat 358  Q
    ||  |||| ||  |||| ||||| ||||||||||||| |  |||||||||| ||||  |  |||| |||| |||||| ||||||||| |||||||||| |    
T  21317087 ggagatttgttcctaaagtatagacaatattttaggaatttttggtggtgt-tttggtgtagttcataaaaatgttcctactttttatgagttgctattt 21317185  T
Q  359 ttattact 366  Q
    || |||||    
T  21317186 ttgttact 21317193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 34639503 - 34639619
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||||||  || || ||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |    
T  34639503 ttgttgggtatttggatattggctttattgttgctaaaacaaatactcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 34639599  T
Q  164 ctgtttgtgtggcttggttt 183  Q
     ||||| |||||||||||||    
T  34639600 ttgtttatgtggcttggttt 34639619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 18152086 - 18152225
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttat 196  Q
    |||||| ||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||| |  | ||| ||||  ||||||    
T  18152086 ctaaaataaatattcatgcatgatgttggatacgatgttctaacatgttggcacggttcagtgtgccctgtttatgtgccaagatttacgcgcgctttat 18152185  T
Q  197 ctttttaaggaaaccacgacttatttcttgttcaccaagt 236  Q
    || ||||||||| |||||  || || ||||||| ||||||    
T  18152186 ctatttaaggaatccacgcatttttacttgttcgccaagt 18152225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 351
Target Start/End: Original strand, 34648453 - 34648615
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatagc-aat 288  Q
    ||||||||| |||| |||||| || | |||||||||||||| ||| | |   |||||||||||||| ||||||   |||| ||| |||||||||   |||    
T  34648453 ctttatcttattaaagaaacctcgccctatttcttgttcacaaagcagcgcgtttttgtccagaatcagctggaagatttgtttctaaaatataaagaat 34648552  T
Q  289 attttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagtt 351  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||    
T  34648553 attttgggattccttggtggtgtgtttggcgtttcctaaagatgttcctactttttagaagtt 34648615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 19077959 - 19077911
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19077959 tgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtg 19077911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 28623080 - 28623160
Alignment:
Q  269 tatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttagga 348  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||  || ||||||||    
T  28623080 tatttctaaaatatagacaatattttaggattccttggtggtgcgtttggtggttcctaaagatgttccgacattttagga 28623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 30425698 - 30425607
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaa 204  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||| |||||| ||||  |||| |||||||| ||||  ||||||||| ||||    
T  30425698 tgtatggtgttggatatgatgttccaacatcttggcacagttcaatgtgtcatgttcttgtgccttggtttgcgcgcgctttatcttattaa 30425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 16308664 - 16308762
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttcc-aacatcttggcacggttcagtgtg 161  Q
    ||||||| |||||| ||  || ||||| | ||||||||||||||| |||||| ||||||||||||||||||||| |||||| | |||| ||||||||||    
T  16308664 ttgttggatatttgtgtgttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaaacatcctagcacagttcagtgtg 16308762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 25806219 - 25806174
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  25806219 gatgttggatacgatgttccaacatcctggcacggttcagtgtgtc 25806174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 12385201 - 12385249
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12385201 tgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtg 12385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 11961281 - 11961230
Alignment:
Q  117 tgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtt 168  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  11961281 tgatgttggatacgatgttccaacatcctggcacggtttagtgtgtcttgtt 11961230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 13196135 - 13196092
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13196135 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 13196092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 19894016 - 19894059
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  19894016 gatgttggatacgatgctccaacatcttggcacggttcagtgtg 19894059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 12039053 - 12039103
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  12039053 tgtaagatgttggatgcaatgttccaacatcttggcacggttcagtgtgtc 12039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 15930191 - 15930239
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  15930191 tgtaagatattggatacgatgttccaacatcctggcacggttcagtgtg 15930239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 17235410 - 17235362
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  17235410 tgtaagatgttggatacgatgctccaacatcctggcacggttcagtgtg 17235362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 19598497 - 19598449
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  19598497 tgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtg 19598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 20764256 - 20764332
Alignment:
Q  64 ttgttgggtatttga-gtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaa 139  Q
    ||||||||||||||| ||| || ||||||| |||||||||||||||||| ||| |||||||||| | | ||||||||    
T  20764256 ttgttgggtatttgatgtattggcttcattattgctaaaacaaatactcttgtttgatgttggaaatgttgttccaa 20764332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 23882041 - 23882089
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  23882041 tgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtg 23882089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 25970493 - 25970445
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  25970493 tgtaagatgttggatatgatgctccaacatcttggcacggttcagtgtg 25970445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 25974933 - 25974885
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  25974933 tgtaagatgttggatatgatgctccaacatcttggcacggttcagtgtg 25974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 23879696 - 23879653
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  23879696 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 23879653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 16308924 - 16308969
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  16308924 gttcctaaagatgttcctactttttaggagtttccatatttattac 16308969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 21722751 - 21722799
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||    
T  21722751 tgtaagatgttggatacaatgttccaacatcctggcatggttcagtgtg 21722799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 8465015 - 8465058
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||    
T  8465015 gatgttggatacaatgttccaacatcctggcacggtttagtgtg 8465058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 17868242 - 17868316
Alignment:
Q  89 cattgttgctaaaacaaatactcatgt--atgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||| |||||  |||||  ||| |||||||||| ||||||||||||| || ||||||||||||||    
T  17868242 cattattgctaaaataaatatccatgtttatgttgttggatacaatgttccaacatcgtgacacggttcagtgtg 17868316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 17878025 - 17878099
Alignment:
Q  89 cattgttgctaaaacaaatactcatgt--atgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||| |||||  |||||  ||| |||||||||| ||||||||||||| || ||||||||||||||    
T  17878025 cattattgctaaaataaatatccatgtttatgttgttggatacaatgttccaacatcgtgacacggttcagtgtg 17878099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 26964805 - 26964881
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat-gatgttggatacgatgttccaacat 142  Q
    |||||||||||||  || || || ||||||||||||||||||||  ||||| | |||||||||||| ||||||||||||    
T  26964805 tgttgggtatttg--tattggctgcattgttgctaaaacaaatatccatgtgttgatgttggatactatgttccaacat 26964881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 33666602 - 33666559
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||    
T  33666602 gatgttggatatgatgctccaacatcctggcacggttcagtgtg 33666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 15002510 - 15002571
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||||||| ||| ||  ||||||||| ||||||| |||||||| ||||| ||||||||    
T  15002510 ctaaaacaaatattcaagtgagatgttggacacgatgtgccaacatcgtggcatggttcagt 15002571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 16308792 - 16308829
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  16308792 ctttatctttttaaggaaaccacgctttatttcttgtt 16308829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 21727747 - 21727702
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||    
T  21727747 gttcctaaagatgttcttactttttaggagtttcaatatttgttac 21727702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 21727879 - 21727842
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  21727879 ctttatctttttaaggaaatcacgtcttatttcttgtt 21727842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 29253039 - 29253072
Alignment:
Q  128 acgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| |||||||||||||||||    
T  29253039 acgatgttccaacatcctggcacggttcagtgtg 29253072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 13869745 - 13869793
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||| | || |||||||||| |||||||||||||||||    
T  13869745 tgtaagatgttggatgcaattttccaacatcctggcacggttcagtgtg 13869793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 7e-99; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 65 - 360
Target Start/End: Original strand, 24311148 - 24311446
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||    
T  24311148 tgttgagtatttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacaatgttccaacatcctggcacggttcagtgtgccc 24311247  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctggg 264  Q
    | |||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||||| |||| ||    
T  24311248 tatttgtgtggcttggttttcgtgagttttatctttttaaggaaaccacgtcttatttcttcttcaccaagtaacgaatttttgtccagaatcagctagg 24311347  T
Q  265 t-atttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||| ||| | || ||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  24311348 tgatttgtttatgaagtatagacaatattttaggatcccttggtggtgttgtttggcggttcctaaagatgttcctactttttaggagttgctatattt 24311446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 60 - 366
Target Start/End: Complemental strand, 31588349 - 31588041
Alignment:
Q  60 gagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtg 159  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  31588349 gagattgttaggtatttgagtattgacctcattgttgctaaaacaaatactcatgtatgatgttggatataatgttccaacatcttgtcacggttcagtg 31588250  T
Q  160 tgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattag 259  Q
    || ||||||| |||| |||||||| ||||  ||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||| ||    
T  31588249 tgccctgtttatgtgccttggtttacgcgtgctttatctttttaaggaaaccgcgccttatttcttgttggccaagtaacatatttttgtccagaatcag 31588150  T
Q  260 ctggg-tatttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctata 357  Q
    ||||| ||||| ||  |||| ||||| ||||||||||||  || |||||||||| || |   ||| |||||||||||  |||||||||||||||| ||||    
T  31588149 ctgggttatttgttcctaaagtatagacaatattttagggatctttggtggtgttttgggtagtttctaaagatgtttctactttttaggagttgttata 31588050  T
Q  358 tttattact 366  Q
    ||| |||||    
T  31588049 tttgttact 31588041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 64 - 360
Target Start/End: Original strand, 36397787 - 36398082
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |    
T  36397787 ttgttgggtatttgggtattggcttcattgttgctaaaacaaatactcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 36397883  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagct-g 262  Q
    |||||| ||||||||||||| ||| | ||||||||| |||||||||| ||| | |||||||||||||||||| |||   |||||||||||||| | || |    
T  36397884 ctgtttatgtggcttggtttacgcaatctttatcttattaaggaaactacgtcctatttcttgttcaccaagcaacgcgtttttgtccagaatcatctag 36397983  T
Q  263 ggtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
       |||| ||| |||||||| | ||||||||||||||| |||||||||||||||| | |||||||||||||||| ||||||||||||||| | ||||||    
T  36397984 aagatttgtttctaaaatataaacaatattttaggatttcttggtggtgtgtttggcagttcctaaagatgttcctactttttaggagttaccatattt 36398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 59 - 360
Target Start/End: Original strand, 24312934 - 24313232
Alignment:
Q  59 ggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||| |||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |    
T  24312934 ggagatagttgggtatttgagtattggattcattgttgctaacacaaatactcatgtatgatgttggatacaatgttccaatatcctggcacggttcaat 24313033  T
Q  159 gtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaatta 258  Q
    ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||      ||||||||||||| |||||||||||| ||| |    
T  24313034 gtgccctgtttgtgtggcttggttttcgcaagctttatgtttttaaggaaaccacgtcttat------ttcaccaagtaacgtatttttgtccataatca 24313127  T
Q  259 gctgggt-atttatttttaaaatatag-caatattttaggattccttggtggt-gtgtttgacggttcctaaagatgttcatactttttaggagttgcta 355  Q
    | ||||| |||| ||  |||| ||||| |||||||||||||| |||||||||| ||||||| |||||| ||||||||||| |||| ||||||| || |||    
T  24313128 gttgggtgatttgttcctaaattatagacaatattttaggatcccttggtggtggtgtttggcggttcttaaagatgttcctactctttaggattttcta 24313227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 126 - 360
Target Start/End: Original strand, 26859346 - 26859582
Alignment:
Q  126 atacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttctt 225  Q
    ||||||||||||||||||||||||||||||| |||| | ||||| ||| ||||||||| | | | ||||||||| |||| |||||| |  | ||||||||    
T  26859346 atacgatgttccaacatcttggcacggttcattgtgccatgtttatgttgcttggtttacacaatctttatcttattaaagaaacctcaccctatttctt 26859445  T
Q  226 gttcaccaagtaacatatttttgtccagaattagctgg-gtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttc 323  Q
    |||||||||| ||| | |||||||||||||| ||||||   |||| ||| |||||||| | |||||||||||||||||||||||||||||||| ||||||    
T  26859446 gttcaccaagcaacgtgtttttgtccagaatcagctggaagatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttc 26859545  T
Q  324 ctaaagatgttcatactttttaggagttgctatattt 360  Q
     |||||| |||| ||||||||||||||| | ||||||    
T  26859546 ataaagacgttcttactttttaggagttaccatattt 26859582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 27108320 - 27108198
Alignment:
Q  52 caaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacg 151  Q
    |||||| |||||||||||| ||||||  || |||||||||| || |||||| ||||| ||||  |||||||||||||||||||||||||||| |||||||    
T  27108320 caaagggggagattgttggatatttgtatattgacttcattatttctaaaataaatattcatacatgatgttggatacgatgttccaacatcctggcacg 27108221  T
Q  152 gttcagtgtgtcctgtttgtgtg 174  Q
    |||||||||| | ||||| ||||    
T  27108220 gttcagtgtgccatgtttatgtg 27108198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 27111874 - 27111733
Alignment:
Q  87 ttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcg 186  Q
    |||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| |||| |  ||||| ||    
T  27111874 ttcattattgctaaaacaaatattcataaatgatgttggatacgatgttccaacatcctggcacggttcaatgtgccctgtttatgtgccaaggtttacg 27111775  T
Q  187 cgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
     |  |||||||| ||||| ||| ||||| ||| || ||||||    
T  27111774 tgcgctttatctatttaaagaatccacgcctttttacttgtt 27111733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 19197649 - 19197791
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttc 185  Q
    ||||||| ||||||||| ||||| ||||   |||||||||||| ||||||||||||| || ||||||||||||||| |||| || |||| | || ||| |    
T  19197649 cttcattattgctaaaaaaaatattcatacttgatgttggatatgatgttccaacatgttagcacggttcagtgtgccctgcttatgtgccatgatttac 19197748  T
Q  186 gcgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
     ||  |||||||| ||||||||| |||||  ||||| ||||||    
T  19197749 acgcgctttatctatttaaggaatccacgcattattacttgtt 19197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 20645610 - 20645673
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    ||||||| || |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  20645610 cttcattatttctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggca 20645673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 15329136 - 15329088
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  15329136 tgtaagatgttggatacgatgttccaacatcctggcacggttctgtgtg 15329088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 21249541 - 21249589
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  21249541 tgtaagatgttggatacgatgttccaacatcctggcacggtttagtgtg 21249589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 24789507 - 24789550
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  24789507 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 24789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 25347977 - 25347858
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactt 193  Q
    ||||||||||||||| ||||| | ||||||||||| ||| ||||||||| | || ||| ||||||||| | | ||| |||| | || ||| | || ||||    
T  25347977 ttgctaaaacaaatattcatgcaagatgttggataagattttccaacatatgggtacgattcagtgtgccttatttatgtgtcatgatttacacgcactt 25347878  T
Q  194 tatctttttaaggaaaccac 213  Q
    ||||| ||||||||| ||||    
T  25347877 tatctatttaaggaatccac 25347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 24311546 - 24311617
Alignment:
Q  290 ttttaggattccttggtggtgt-gtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    ||||||||| |||||||| ||| ||||| | |||||||| ||||||| || |||||||||||| ||||||||    
T  24311546 ttttaggatcccttggtgatgttgtttggcagttcctaatgatgttcctattttttaggagtttctatattt 24311617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 23759547 - 23759492
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    ||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  23759547 ccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 23759492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 20475937 - 20475985
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctg 166  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||| ||||    
T  20475937 gatgttggatacgatgttccaacatgttggcgcaattcagtgtgccctg 20475985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 1e-97; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 98 - 368
Target Start/End: Original strand, 23863622 - 23863894
Alignment:
Q  98 taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatc 197  Q
    ||||||||||||||||||| ||||||||||| |||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  23863622 taaaacaaatactcatgtaggatgttggatatgatgttccaaaatgttggcacagttcagtgtgccctgtttgtgtggcttggttttcgcgaactttatc 23863721  T
Q  198 tttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttag 295  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||| |||||||||||    
T  23863722 tttttacggaaaccacaacttatttcttgttcaccaagtaacatatttttgtccagaatcagctgggtgatttgtttctaaaatatagacaatattttag 23863821  T
Q  296 gattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatatttattactat 368  Q
    |||||||||||| |||||||   | || ||||||||||||||||||||||||||||| ||||||| |||||||    
T  23863822 gattccttggtgatgtgtttcgagctttctaaagatgttcatactttttaggagttgatatatttgttactat 23863894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 70 - 368
Target Start/End: Original strand, 24849465 - 24849757
Alignment:
Q  70 ggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgttt 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||       ||||  ||||| |    
T  24849465 ggtatttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgttggatacaatgttctaacattttggca-------gtgtaccctgtct 24849557  T
Q  170 gtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-att 268  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || |||    
T  24849558 gtgtggcttggttttcgcgaactttatctttttaaggaaaccacaacttatttcttgttcaccaagtaacatatttttgtccagaatcagctgagtgatt 24849657  T
Q  269 tatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatatttattacta 367  Q
    | ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| || ||||||| ||||||    
T  24849658 tgtttctaaaatatagacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctacattttaagagatg-tatatttgttacta 24849756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 12813954 - 12814202
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaacca 212  Q
    |||| ||||||| | | |||||||||||||||||||||||||||||| | |||| || ||||||||||||||| || |||||||||| ||||||||||||    
T  12813954 tgtacgatgttgaaaatgatgttccaacatcttggcacggttcagtgggccctggttttgtggcttggttttcacgcactttatcttattaaggaaacca 12814053  T
Q  213 cgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtg 310  Q
    || ||||| |||||||||||||||||| |||||||||||| |||   |||||| |||| ||  |||| |||||  |||||||||||||||||||||| ||    
T  12814054 cgccttatctcttgttcaccaagtaacgtatttttgtcca-aatcttctgggtgatttgttcctaaagtatagataatattttaggattccttggtgttg 12814152  T
Q  311 tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  12814153 tgtttggcggttcctaaagatgttcctactttttaggagttgttatattt 12814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 9997441 - 9997340
Alignment:
Q  30 tagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatg--tatgatgttggat 127  Q
    |||||||| ||||||||| ||||||||   |||||||||||||||||||||| || |||||||||||||||||||||||| ||||  | |||||||||||    
T  9997441 tagttttatcaacaaatacatccaaagagagagattgttgggtatttgagtattggcttcattgttgctaaaacaaatacccatgtttgtgatgttggat 9997342  T
Q  128 ac 129  Q
    ||    
T  9997341 ac 9997340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 23867557 - 23867629
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgtt 123  Q
    ||||||| |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  23867557 ccaaagggggagatggttgggtatttgagtattggcttcattgttgctaaaacaaatactcatgtataatgtt 23867629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 18622477 - 18622429
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18622477 tgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtg 18622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 1684787 - 1684656
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttat 196  Q
    |||||||||||| |||||| | ||||| ||||||||| ||||||||| | |||| |||||||||| ||||    |||| |  | ||| ||| | ||||||    
T  1684787 ctaaaacaaatattcatgtgtcatgtttgatacgatgctccaacatcctagcacagttcagtgtgccctgaagttgtgccaagatttacgcaagctttat 1684688  T
Q  197 ctttttaaggaaaccacgacttatttcttgtt 228  Q
    |||||| ||||||||||| |||||||||||||    
T  1684687 ctttttgaggaaaccacgccttatttcttgtt 1684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 12813887 - 12813950
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    ||||||| ||||||||||||||||||  ||||||||||||||| | |||||||||||| |||||    
T  12813887 cttcattattgctaaaacaaatactctagtatgatgttggatatgttgttccaacatcctggca 12813950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 26537098 - 26537053
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  26537098 gatgttggatatgatgttccaacatcatggcacggttcagtgtgtc 26537053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 12376211 - 12376302
Alignment:
Q  88 tcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttg 179  Q
    ||||| ||||||||||||||| ||||| | ||||||||||| ||||||||||||  | || | ||||||||||| |||| || |||| ||||    
T  12376211 tcattattgctaaaacaaatattcatgcaagatgttggataagatgttccaacaggtgggtatggttcagtgtgccctgattttgtgtcttg 12376302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 23250595 - 23250485
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcac 150  Q
    ||||||| ||||||||| || |||||| ||  || || || | || ||| |||||||| ||| || |||| ||||| |||||||||||||||| |||||     
T  23250595 ccaaagggggagattgtgggatatttgtgtgttggctgcactttttctacaacaaatattcaagtgtgatattggacacgatgttccaacatcctggcat 23250496  T
Q  151 ggttcagtgtg 161  Q
    |||||||||||    
T  23250495 ggttcagtgtg 23250485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 20254226 - 20254268
Alignment:
Q  119 atgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||| |||||||||||||| || ||||||||||||||    
T  20254226 atgttggatatgatgttccaacatcctgacacggttcagtgtg 20254268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 9997632 - 9997555
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatg--atgttggatacgatgttccaacat 142  Q
    |||||||||||||  || || || |||| ||||||||||||||| |||||| ||  ||||||||||| ||||||||||||    
T  9997632 tgttgggtatttg--tattggctgcattattgctaaaacaaatattcatgtttgtaatgttggatactatgttccaacat 9997555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 17880088 - 17880149
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    ||||||||||||  |||||  ||||||| | ||||||| |||||||||||||| ||||||||    
T  17880088 ctaaaacaaatatgcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcagt 17880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 9997312 - 9997265
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||| | |||| ||||||||||||||||||    
T  9997312 tgtaagatgttggatacgatgtt-ctacattttggcacggttcagtgtg 9997265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 22485941 - 22485901
Alignment:
Q  121 gttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||||||||||| ||||||||| |||||| ||||||||||    
T  22485941 gttggatacgatgctccaacatcctggcacagttcagtgtg 22485901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 23540750 - 23540798
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||| ||||||||||||||||||||| |||||| ||| ||||||    
T  23540750 tgtaagatgatggatacgatgttccaacatcctggcacagtttagtgtg 23540798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 27924796 - 27924844
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| || |||| |||||||||    
T  27924796 tgtaagatgttggataagatgttccaacatcctgacacgattcagtgtg 27924844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 33962549 - 33962501
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||  ||||||||||||| |||||| ||||||||||    
T  33962549 tgtaagatgttggatattatgttccaacatcctggcacagttcagtgtg 33962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 4e-94; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 50 - 365
Target Start/End: Complemental strand, 24814972 - 24814654
Alignment:
Q  50 tccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    |||||||| ||||  |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  24814972 tccaaagggggagtatgttgggtattttagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgcttcaacatcttggca 24814873  T
Q  150 cggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgt 249  Q
    || ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24814872 cgattcagtgtgccctgtttgtgtggcttagttttcgtgaactttatctttttaaggaaaccacgccttatttcttgttcaccaagtaacatatttttgt 24814773  T
Q  250 ccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttcctaaagatgttcatactttttag 346  Q
    ||||||| | || | | |||| ||  |||| ||||| |||||||||| |||||||| ||| || |||||  ||||||| |||||| ||| ||||||||||    
T  24814772 ccagaatcaactagatgatttgttcctaaagtatagacaatattttatgattccttagtgatgttgttttgcggttccaaaagatattcctactttttag 24814673  T
Q  347 gagttgctatatttattac 365  Q
    |||||||||||||| ||||    
T  24814672 gagttgctatatttgttac 24814654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 65 - 360
Target Start/End: Original strand, 26193635 - 26193932
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||||| | |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||  |    
T  26193635 tgttgggtatttgagcattaggttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcatggtttagcgtgctc 26193734  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctggg 264  Q
    ||||| ||||||||||||| ||| |  |||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| | || ||    
T  26193735 tgtttatgtggcttggtttacgcaagttttatcttattaaagaaaccacgccttatttcttattcaccaagtaacatatttttgtccagaatcaactagg 26193834  T
Q  265 t-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||| ||| ||||| |||| |||||||||| ||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  26193835 tgatttgtttctaaaacatagacaatattttacgattccttgatggtgtttttggcggttcctaaagatgttcttactttttaggagttgctatattt 26193932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 53 - 360
Target Start/End: Original strand, 23174035 - 23174334
Alignment:
Q  53 aaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacgg 152  Q
    ||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |    
T  23174035 aaagggggagattgttgggtatttgattattgacttcattgttggtaaaacaaatactcatgtatgatgttggatacaatgttctaacatcttgacacag 23174134  T
Q  153 ttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttt-taaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtcc 251  Q
    ||||||||||           |||||| ||| || ||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  23174135 ttcagtgtgt-----------ggcttgattt-cgtgaactgtatcttttttaaggaaaccacaccttatttcttgttcaccaagtaacatatttttgtcc 23174222  T
Q  252 agaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttcctaaagatgttcatactttttagga 348  Q
    || || || ||| | |||| ||  |||| ||||| ||||||||||||||||||||||| || |||||| ||||||||||| |||||| |||||||||||     
T  23174223 aggatcagttggatgatttgttcctaaagtatagacaatattttaggattccttggtgatgttgtttggcggttcctaaatatgttcctactttttaggt 23174322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 128 - 360
Target Start/End: Complemental strand, 15709162 - 15708926
Alignment:
Q  128 acgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgt 227  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| || |||  ||||||||||||||||||| ||| ||||||||||||    
T  15709162 acgatgttccaacatcctggcacggttcagtgtgccctgtttgtatggcttggttatctcgagttttatctttttaaggaaactacgccttatttcttgt 15709063  T
Q  228 tcaccaagt-aacatatttttgtccagaattagctggg-tatttatttttaaaatatag-caatattttaggattccttggtggtg-tgtttgacggttc 323  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||  |||| ||||| ||| |||||||||||||||||| ||| | ||||  |||||    
T  15709062 tcaccaagtaaacatatttttgtccagaatcagctgggttatttgttcctaaattatagacaagattttaggattccttggtagtgttctttggaggttc 15708963  T
Q  324 ctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||||||||||| | ||||||||||||||||||||||    
T  15708962 ctaaagatgttcctgctttttaggagttgctatattt 15708926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 65 - 360
Target Start/End: Complemental strand, 19295615 - 19295317
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||||| |||||| ||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19295615 tgttggatatttgtgtgttggcttcattattgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 19295516  T
Q  165 tgtttgtgtggcttggttttcgcgaac-tttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg 263  Q
    ||||| ||||  |   | | | || || |||||||||||||||||  || | ||||||| |||||  |||||| |||  |||||||||| ||| | ||||    
T  19295515 tgtttatgtgcttaactgtacacgcacttttatctttttaaggaattcatgccttattttttgttggccaagtgacacgtttttgtccataatcaactgg 19295416  T
Q  264 g-tatttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |  |||| ||  |||| ||||| ||||||||||||| |  ||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  19295415 gagattttttcctaaagtatagacaatattttaggaatatttggttgtgtgtttggcagttcctaaagatgttcctactttttaggagttgctatattt 19295317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 118 - 334
Target Start/End: Complemental strand, 23297297 - 23297079
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgact 217  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||   |||||||| |||||| ||  ||||||||| |||||||||||||| ||    
T  23297297 gatgttggaaatgatgtttcaacatcttggcacggttcagtgtgtcctgtgcttgtggctttgttttcacgcgctttatcttattaaggaaaccacgtct 23297198  T
Q  218 tatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgttt 315  Q
    ||| ||||||||||||||||||   |||||||| |||||   |||||| |||| ||  |||| |||||  |||||||||||||||||||||| || ||||    
T  23297197 tatctcttgttcaccaagtaacgattttttgtcaagaatcttctgggtgatttgttcataaagtatagataatattttaggattccttggtgttgcgttt 23297098  T
Q  316 gacggttcctaaagatgtt 334  Q
    | | ||||| |||| ||||    
T  23297097 ggcagttcccaaagttgtt 23297079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 10252237 - 10252065
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||| |||||||||||| |||  ||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||    
T  10252237 tgttcggtatttgagtattgaactcattgttgataaaataaatattcatgtatgatgttggatacgatgttccaatatcatggtacggttcagtgtatcc 10252138  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagta 237  Q
    ||||| ||||| ||| |||  ||||  |||||||| ||||||||  |||| |||||||||||||  |||||||    
T  10252137 tgtttatgtggtttgatttatgcgagttttatcttattaaggaattcacgccttatttcttgttggccaagta 10252065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 365
Target Start/End: Original strand, 23579259 - 23579563
Alignment:
Q  64 ttgttgggtatttga-gtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgt 162  Q
    ||||||||||||||| ||| ||  |||||| ||||||||| ||||| || | |  ||||||||| | | |||||||||||| || |  |||||||||||     
T  23579259 ttgttgggtatttgatgtattggattcattattgctaaaataaatattcttattagatgttggaaatgttgttccaacatcctgacgaggttcagtgtgc 23579358  T
Q  163 cctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctg 262  Q
    | ||  | ||||||||||||||| || || ||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||| |||||||||   ||     
T  23579359 cttggatttgtggcttggttttcacgtacattatcttattaaggaaaccacgtcttatctcttgttcaccaaggaacgtattttagtccagaatattctt 23579458  T
Q  263 ggt-atttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    ||| |||| ||| |||| ||| |   ||||||||||||||||||||| | | |  | |||||||||||||||||| ||||| |||||| ||| |||||||    
T  23579459 ggtgatttgtttctaaagtataaattatattttaggattccttggtgttttttgaggcggttcctaaagatgttcgtacttcttaggaattgttatattt 23579558  T
Q  361 attac 365  Q
     ||||    
T  23579559 gttac 23579563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 10661817 - 10661693
Alignment:
Q  19 atggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactca-tgtat 117  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||| || | | |    
T  10661817 atggcctcagtttgttttatcaacaaataaatccaaagggggagattgttgggtatttgagtattggcttcgttgttgctaaaacaaatacccattttgt 10661718  T
Q  118 gatgttggatacgatgttccaacat 142  Q
    |||||||||||| |  |||||||||    
T  10661717 gatgttggatacaagtttccaacat 10661693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 19353979 - 19353830
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||||| ||||||  || || |||||||  |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  19353979 tgttggatatttgtatattggcttcattactgctaaaacaaatattcatgcatgatattggatacgatgttccaacatgttggcacggttcagtgtgccc 19353880  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacg 214  Q
    | ||| |||| | || ||| |||| ||||||||  ||||||||| |||||    
T  19353879 tttttatgtgccatgatttacgcgcactttatcaatttaaggaatccacg 19353830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 9567768 - 9567653
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcac 150  Q
    ||||||| |||||||||||| |||||| ||  || | ||| | ||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||    
T  9567768 ccaaagggggagattgttggatatttgtgtgttggcctcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcac 9567669  T
Q  151 ggttcagtgtgtcctg 166  Q
     |||||||||| ||||    
T  9567668 agttcagtgtgccctg 9567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 14688147 - 14688081
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgt 160  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14688147 ttgctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggcacggttcagtgt 14688081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 4793891 - 4794056
Alignment:
Q  63 attgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgt 162  Q
    |||||||| |||||| ||  || ||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||  |||||||||     
T  4793891 attgttggatatttgtgtgttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcgtagcacatttcagtgtgc 4793990  T
Q  163 cctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    ||||    |||| |  | |||  ||   ||||||||||||||||||||||||  ||||||||||||    
T  4793991 cctgaagttgtgccaagatttatgcacgctttatctttttaaggaaaccacgctttatttcttgtt 4794056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 4541988 - 4542060
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctg 166  Q
    ||||||||||||||| ||| || |||||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  4541988 ttgctaaaacaaatattcaagtgtgatgttggacaccatgttccaacatcctggcatggttcagtgtgtcctg 4542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 15711825 - 15711758
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgat 132  Q
    ||||||||||||| ||| || ||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  15711825 tgttgggtatttgtgtattggcttcattattgctaaaacaaatattcatgtttgatgttggatacgat 15711758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 12326623 - 12326580
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  12326623 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 12326580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 7509078 - 7509005
Alignment:
Q  286 aatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    ||||||||||||| |||||||| | |||||| ||||||||||  |||||| ||| ||||||||||||||||||||    
T  7509078 aatattttaggat-ccttggtgttatgtttggcggttcctaataatgttcctacattttaggagttgctatattt 7509005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 10662053 - 10661932
Alignment:
Q  20 tggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatg--tat 117  Q
    ||||||||| | |||||| ||| ||| || |||||||| ||||||||||||||||||  ||| || || |||| |||||||||||||||  ||||  | |    
T  10662053 tggcctcaggttgttttagcaaaaaa-aattccaaagggggagattgttgggtattt--gtattggctgcattattgctaaaacaaatatccatgtttgt 10661957  T
Q  118 gatgttggatacgatgttccaacat 142  Q
    |||||||||||| ||||||||||||    
T  10661956 gatgttggatactatgttccaacat 10661932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 26132298 - 26132355
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgt 171  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  26132298 tgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtg-cctgtttgt 26132355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 10661679 - 10661630
Alignment:
Q  112 atgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  10661679 atgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtg 10661630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 20992359 - 20992311
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  20992359 tgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtg 20992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 21261246 - 21261198
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  21261246 tgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtg 21261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 23082119 - 23082167
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  23082119 tgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtg 23082167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 23960841 - 23960793
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  23960841 tgtaagatgttggatacgatgttccaacatcctggcacgattcagtgtg 23960793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 14927456 - 14927413
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  14927456 gatgttggatacgatgttccaacatcctggcacggtttagtgtg 14927413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 15350922 - 15350879
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  15350922 gatgttggatacgatgttccaacatcctggcacggtttagtgtg 15350879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 42637022 - 42636972
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||||||    
T  42637022 tgtaagatgttgaatacgatgttccaacgtcctggcacggttcagtgtgtc 42636972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 9564902 - 9564857
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  9564902 gttcctaaagatgttcctactttttaggagtttccatatttattac 9564857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 9567496 - 9567451
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  9567496 gttcctaaagatgttcctactttttaggagtttccatatttattac 9567451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 12560529 - 12560625
Alignment:
Q  63 attgttgggtatttgagtaatgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||| ||||||  || |||||||| | |||| ||||||||||| ||||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  12560529 attgttggatatttgtatattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 12560625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 16207224 - 16207272
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||||||    
T  16207224 tgtaagatgttggatatgatgttccaacatcctggcatggttcagtgtg 16207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 20924455 - 20924498
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| ||||| | |||||||||    
T  20924455 gatgttggatacgatgttccaacatcctggcaagattcagtgtg 20924498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 9893425 - 9893467
Alignment:
Q  124 ggatacgatgttccaacatcttggcacggttcagtgtgtcctg 166  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  9893425 ggatacgatgttccaacatgttggcacgcttcagtgtgccctg 9893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 10280654 - 10280612
Alignment:
Q  119 atgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||| |||||||||| || ||||||||||||||    
T  10280654 atgttggatacgatattccaacatcctgccacggttcagtgtg 10280612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 29545484 - 29545534
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||||| ||||||||||||| | ||| |||||||||||||    
T  29545484 tgtaagatgttggatacaatgttccaacatcctagcatggttcagtgtgtc 29545534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 4794150 - 4794195
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||    
T  4794150 gttcctaaagatgttcctactttttaggagtttccatatttgttac 4794195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 23297369 - 23297312
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatc 143  Q
    ||||||| ||||||||||||||||||  || |||||||| ||| | ||||||||||||    
T  23297369 cttcattattgctaaaacaaatactctagtttgatgttgcatatgttgttccaacatc 23297312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 4459555 - 4459507
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||| ||||||||||||| | ||||| |||||||||    
T  4459555 tgtaagatgttggatacaatgttccaacatcctagcacgattcagtgtg 4459507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 11520759 - 11520803
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgt 162  Q
    |||||||||||| ||| | ||||||| ||||||||||||||||||    
T  11520759 gatgttggatacaatgcttcaacatcctggcacggttcagtgtgt 11520803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 11559814 - 11559910
Alignment:
Q  59 ggagattgttgggtatttgagtaatgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggtt 154  Q
    |||||||||||| ||||||| |  || | ||||| |||| ||||||||||| ||| ||  ||||||||| |||||||||||| ||| ||||| ||||    
T  11559814 ggagattgttggatatttgaatgttggcctcatttttgcctaaaacaaatattcaagtgagatgttggacacgatgttccaatatcctggcatggtt 11559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 16221916 - 16221952
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggca 149  Q
    |||| |||||||||||||||||||||||||| |||||    
T  16221916 tgtaagatgttggatacgatgttccaacatcctggca 16221952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 64 - 362
Target Start/End: Original strand, 22183612 - 22183912
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  22183612 ttgttgggtatttgagtattggcttcattgtcactaaaacaaatactcatgtatgatgttggatacgatgttccaatatcttggcacggttcagtgtgcc 22183711  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg 263  Q
    |||||| |||| |||||||| ||| | ||||||||| ||||||||||||||  ||||||||| ||||||||||| | |||||||||||| ||| | ||      
T  22183712 ctgtttatgtgacttggtttacgcaatctttatcttattaaggaaaccacgcgttatttctttttcaccaagtaccgtatttttgtccataatcaactac 22183811  T
Q  264 gt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattta 361  Q
    || |||| ||| |||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||    
T  22183812 gtgatttgtttctaaaatatagacaatatgttaggattccttggtggtgtgtttggcggttactaaagatgttcctactttttaggagttgccatattta 22183911  T
Q  362 t 362  Q
    |    
T  22183912 t 22183912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 87 - 360
Target Start/End: Complemental strand, 24118383 - 24118108
Alignment:
Q  87 ttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcg 186  Q
    |||||| ||| ||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||  |    
T  24118383 ttcattattgataaaacaaatatttatgtatgatgttggatatgctgttccaacatcttggcacggttcagtgtgtcctgtttatgtgccttggtttatg 24118284  T
Q  187 cgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacata-tttttgtccagaattagctgggt-atttatttttaaaatatag 284  Q
     |  ||||||||| ||||| ||| |||  |||||||||||||   |||||    || |||||||||||||| |||||||| |||| ||  |||| |||||    
T  24118283 tgcgctttatcttattaagaaaatcacaccttatttcttgttggtcaagttgtgtactttttgtccagaatcagctgggtgatttgttcctaaagtatag 24118184  T
Q  285 -caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
      |||||||||| | || |||||||||| ||||   |||| ||||||||||| |||||||||| ||||||| |||||    
T  24118183 aaaatattttagaaatctttggtggtgt-tttggtagttcttaaagatgttcctactttttagaagttgctttattt 24118108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 360
Target Start/End: Complemental strand, 9523526 - 9523379
Alignment:
Q  216 cttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtgt-g 312  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| ||| |||| ||  |||| ||||| |||||||||||||| |||| ||||||| |    
T  9523526 cttatttcttgttcaccaagtaacgtatttttatccagaatcagctcggtgatttgttcctaaagtatagacaatattttaggatcccttagtggtgttg 9523427  T
Q  313 tttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||| ||||||||||| ||||||||||||||||| ||||| |||||||    
T  9523426 tttggcggttcctaaaaatgttcatactttttagaagttgatatattt 9523379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 20740296 - 20740441
Alignment:
Q  83 tgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggtt 182  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||| | |||| |||||||||  ||||    |||| |  | ||    
T  20740296 tgacttcatttttgctaaaacaaatattcatgtgtgatgttggatacaatgttccaacatcctagcacagttcagtgtaccctgaagttgtgccaagatt 20740395  T
Q  183 ttcgcgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    |  ||   |||||||||||||||||||||||| |||||||||||||    
T  20740396 tatgcacgctttatctttttaaggaaaccacgccttatttcttgtt 20740441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 17660759 - 17660850
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttca 156  Q
    |||||| ||||||  || || ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  17660759 tgttggatatttgtatattggcttcattattgctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggcacagttca 17660850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 20127774 - 20127707
Alignment:
Q  94 ttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||| || |||||||||||||    
T  20127774 ttgctaaaacaaatattcatttaagatgttggatacgatgttccaacatctgggtacggttcagtgtg 20127707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 22082034 - 22082082
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  22082034 tgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtg 22082082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 23624657 - 23624609
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  23624657 tgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtg 23624609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 23757602 - 23757650
Alignment:
Q  115 tatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23757602 tatgatgttggatacgatgttccaacatcctggcacgattcagtgtgtc 23757650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 23823058 - 23823106
Alignment:
Q  115 tatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23823058 tatgatgttggatacgatgttccaacatcctggcacgattcagtgtgtc 23823106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 30605034 - 30605082
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  30605034 tgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtg 30605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 22251389 - 22251432
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  22251389 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 22251432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 22130414 - 22130459
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||    
T  22130414 gttcctaaagatgttcatactttttaggagtttccatatttgttac 22130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 38406172 - 38406123
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgt 167  Q
    ||||||||||||||||||||| |||| | ||||||||||||||| |||||    
T  38406172 gatgttggatacgatgttccagcatcctagcacggttcagtgtgccctgt 38406123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 18221926 - 18221878
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||||||| | |||||||||||    
T  18221926 tgtaagatgttggatatgatgttccaacatcttggaatggttcagtgtg 18221878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 26037593 - 26037545
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||||||    
T  26037593 tgtaagatgtcggatacgatgttccaacatcctggcatggttcagtgtg 26037545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 17920100 - 17920199
Alignment:
Q  60 gagattgttgggtatttgagtaatgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    ||||||||||| ||||||  || || ||||| | |||| ||||||||||| ||||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  17920100 gagattgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 17920199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 24190674 - 24190631
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  24190674 gatgttggatacgatgctccaacattctggcacggttcagtgtg 24190631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 23419900 - 23419950
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||||| ||| ||||||||| |||||||||||| ||||||    
T  23419900 tgtaagatgttggatacaatgctccaacatcctggcacggttcaatgtgtc 23419950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 9421868 - 9421905
Alignment:
Q  122 ttggatacgatgttccaacatcttggcacggttcagtg 159  Q
    |||||||||||||||||||||| | |||||||||||||    
T  9421868 ttggatacgatgttccaacatcctagcacggttcagtg 9421905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 20740543 - 20740588
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||    
T  20740543 gttcctaaagatgttcctactttttaggagtttccatatttgttac 20740588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 22251278 - 22251332
Alignment:
Q  52 caaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    |||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  22251278 caaaggtggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 22251332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 22404109 - 22404154
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||| ||||||||||||| ||||| |||||||| ||||    
T  22404109 gatgttggatacaatgttccaacatcctggcatggttcagtatgtc 22404154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 34404783 - 34404844
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||||||| ||||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  34404783 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 34404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 10723195 - 10722854
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    |||||||||| || ||||||||||||||||||||||||||  || |||||||| ||||| |||| || |||||||||||||| |||||||| ||||||||    
T  10723195 catggcctcaatttgttttaacaacaaataaatccaaagggcgaaattgttggatatttcagtattggcttcattgttgctagaacaaatagtcatgtat 10723096  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgact 217  Q
    |   |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||| | ||||||||| |||||||||||||  |     
T  10723095 g---ttggatacgatgttccaacatcttggcacggttcagtgttccctgtttatgtggcttggtttacgcaatctttatcttattaaggaaaccacaccc 10722999  T
Q  218 tatttcttgttcaccaagtaacatatttttgtccagaattagctgg-gtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgttt 315  Q
    |||||||||||||||||| | |   ||||||||||  || || |||   |||| ||| |||||||| | || ||||||||||||||||||||||||||||    
T  10722998 tatttcttgttcaccaagcagcgcgtttttgtccatgatcagttggaagatttgtttctaaaatataaacagtattttaggattccttggtggtgtgttt 10722899  T
Q  316 gacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||||||||||||||||| ||||||||||||||| | ||||||    
T  10722898 ggcggttcctaaagatgttcctactttttaggagttaccatattt 10722854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 10936964 - 10936623
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    |||||||||| || ||||||||||||||||||||||||||  || |||||||| ||||| |||| || |||||||||||||| |||||||| ||||||||    
T  10936964 catggcctcaatttgttttaacaacaaataaatccaaagggcgaaattgttggatatttcagtattggcttcattgttgctagaacaaatagtcatgtat 10936865  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgact 217  Q
    |   |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||| | ||||||||| |||||||||||||  |     
T  10936864 g---ttggatacgatgttccaacatcttggcacggttcagtgttccctgtttatgtggcttggtttacgcaatctttatcttattaaggaaaccacaccc 10936768  T
Q  218 tatttcttgttcaccaagtaacatatttttgtccagaattagctgg-gtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgttt 315  Q
    |||||||||||||||||| | |   ||||||||||  || || |||   |||| ||| |||||||| | || ||||||||||||||||||||||||||||    
T  10936767 tatttcttgttcaccaagcagcgcgtttttgtccatgatcagttggaagatttgtttctaaaatataaacagtattttaggattccttggtggtgtgttt 10936668  T
Q  316 gacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | |||||||||||||||||| ||||||||||||||| | ||||||    
T  10936667 ggcggttcctaaagatgttcctactttttaggagttaccatattt 10936623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 113 - 364
Target Start/End: Original strand, 16654678 - 16654932
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaacca 212  Q
    |||| ||||||||||| |||||| ||||||| |||||  |||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  16654678 tgtacgatgttggatatgatgtttcaacatcctggcatagttcagtgtgccctgtttgtgtggcttggttttcacgagctttatctttttaaagaaacca 16654777  T
Q  213 cgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggt- 309  Q
     | ||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||| ||  |||| ||||| |||||||||||||||||||||||||     
T  16654778 agccttatttctcgttcaacaagtaacatatttttgtccagaatcagctgggtgatttgttcctaaagtatagacaatattttaggattccttggtggta 16654877  T
Q  310 gtgtttgacggttcctaaagatgttcatactttttaggagttgctatatttatta 364  Q
     |||||| |||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  16654878 ttgtttggcggttcctaaagatattcctactttataggagtggctatatttatta 16654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 65 - 262
Target Start/End: Complemental strand, 49975111 - 49974915
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||||| ||||  ||||||||||||||||||||||||| ||||||| ||||||||| ||    
T  49975111 tgttgggtatttgagtattgacctcattgtttctaaaacaa-tactcttgtacaatgttggatacgatgttccaacatcctggcacgattcagtgtgccc 49975013  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctg 262  Q
    ||||| ||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  49975012 tgtttatgtggcttggtttacacgagctttatctttttaaggaaaccacgccttatttcttgttcaccaagtaacatatttttgtccataatcagctg 49974915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 65 - 348
Target Start/End: Complemental strand, 16616809 - 16616525
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||| ||||||||| |  | |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||    
T  16616809 tgttgggcatttgagtattagcctcattgttgctaag-caaatactcatgtatgatgttggattcgatgttccaatatcttggcacagttcagtgtgccc 16616711  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg- 263  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||| | |||||||||||||||||||| | |||||||||| ||||| | ||||     
T  16616710 tgtttgtgtggcttggttttcacgcgctttatcttattaaggaaaccacgccatatttcttgttcaccaagtatcgtatttttgtctagaatcatctgga 16616611  T
Q  264 gtatttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttagga 348  Q
      |||| ||  |||| ||||| ||||||||| ||||| ||||||||||| |||| | ||||||||||||||||  ||||| |||||    
T  16616610 agatttgttcctaaagtatagacaatattttgggatttcttggtggtgtttttggcagttcctaaagatgttcccactttatagga 16616525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 10683155 - 10682977
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||  ||| || ||||||||||||||||||||||||||||||      
T  10683155 catggcctcagtttgttttaacaacaaataaatccaaaggggaaaattgttgggtatttcggtattggcttcattgttgctaaaacaaatactcatgt-- 10683058  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| | |||||||||    
T  10683057 -atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttgatttacgcaatctttatctt 10682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 10896795 - 10896617
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||  ||| || ||||||||||||||||||||||||||||||      
T  10896795 catggcctcagtttgttttaacaacaaataaatccaaaggggaaaattgttgggtatttcggtattggcttcattgttgctaaaacaaatactcatgt-- 10896698  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| | |||||||||    
T  10896697 -atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttgatttacgcaatctttatctt 10896617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 366
Target Start/End: Original strand, 10197541 - 10197844
Alignment:
Q  65 tgttgggtatttgagtaatgacttc--attgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgt 162  Q
    |||||| |||||| ||| |||||||  ||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||     
T  10197541 tgttggatatttgtgtattgacttctcattattgctaaaacaaatattcatttatgatgttggatatgatgttccaacatcttggcacggttcagtgtgc 10197640  T
Q  163 cctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctg 262  Q
    | ||||| | || || | | | |||  |||||||||| |||||| | ||||| |||| |||||||| ||||||||||   |||||||||||||| |||||    
T  10197641 catgtttatttgcctagctatacgcacactttatcttattaaggcatccacgccttaattcttgttaaccaagtaacgcgtttttgtccagaatcagctg 10197740  T
Q  263 ggt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
     || |||| ||  |||||||||| ||||||||||||| || |||||||||| ||||   |||||||||||||||| ||||||||| ||||||||||||||    
T  10197741 agtgatttgttcctaaaatatagacaatattttaggaatctttggtggtgt-tttggtagttcctaaagatgttcctacttttta-gagttgctatattt 10197838  T
Q  361 attact 366  Q
     |||||    
T  10197839 gttact 10197844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 67 - 360
Target Start/End: Complemental strand, 21479261 - 21478978
Alignment:
Q  67 ttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctg 166  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||  |||| |||||||||    
T  21479261 ttgggtatttgagtattggcttcattgttgttaaaacaaatactcatgtataatgttggataggatgttccaacatcttggcacaattcaatgtgtcctg 21479162  T
Q  167 tttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgg-gt 265  Q
     || ||||||||||||| ||| | | ||            |||||||| | |||||||||||||||||| | |   |||||||||||||| ||| ||       
T  21479161 cttatgtggcttggtttacgcaatcctt------------aaaccacgccctatttcttgttcaccaagcagcgcgtttttgtccagaatcagccggaag 21479074  T
Q  266 atttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||| ||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| | ||||||    
T  21479073 atttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttgatggttcctaaagatgttcctactttctaggagttaccatattt 21478978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 33744377 - 33744237
Alignment:
Q  23 cctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgt 122  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||| || ||| |||||||||||||||||||||||||||||||||    
T  33744377 cctcagtttgttttaacaacaaataaatccaaagggggagattgctgggtgtttgagtattggcttaattgttgctaaaacaaatactcatgtatgatgt 33744278  T
Q  123 tggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||| |||||||||||||| | |||||||||||| ||||    
T  33744277 tggataagatgttccaacatcctagcacggttcagtctgtc 33744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 10718382 - 10718225
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    |||||||||| || |||||||||||||||||||||||||| | | |||||||||||||| |||| || |||||||||| ||||| |||||||||||||||    
T  10718382 catggcctcaatttgttttaacaacaaataaatccaaaggggaaaattgttgggtatttcagtattggcttcattgtttctaaa-caaatactcatgtat 10718284  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttg 179  Q
    |   |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  10718283 g---ttggatacgatgttccaacatcctggcacggttcagtgtgccctgtttatgtggcttg 10718225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 10932151 - 10931994
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    |||||||||| || |||||||||||||||||||||||||| | | |||||||||||||| |||| || |||||||||| ||||| |||||||||||||||    
T  10932151 catggcctcaatttgttttaacaacaaataaatccaaaggggaaaattgttgggtatttcagtattggcttcattgtttctaaa-caaatactcatgtat 10932053  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttg 179  Q
    |   |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  10932052 g---ttggatacgatgttccaacatcctggcacggttcagtgtgccctgtttatgtggcttg 10931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 33746785 - 33746693
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttca 156  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||    
T  33746785 ttgttgggtatttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttctaacatcctggcgcggttca 33746693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 31971779 - 31971615
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||| |||||| ||  |||||||| | ||||||||| ||||| |||||| |||||||| |||||||||||||||||| | |||| |||||||||| |    
T  31971779 ttgttggatatttgtgtgttgacttcacttttgctaaaataaatattcatgtgtgatgttgtatacgatgttccaacatcctagcacagttcagtgtgcc 31971680  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    |||    |||| |  | |||  ||   |||||||||||||||||||||||| |||||||||||||    
T  31971679 ctgaagttgtgccaagatttatgcacgctttatctttttaaggaaaccacgtcttatttcttgtt 31971615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 16654590 - 16654674
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    |||||| |||||| ||| || ||||||| ||||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||    
T  16654590 tgttggatatttgtgtattggcttcattattgctaaaacaaatattcatgtacgatgttggatatgttgttccaacatcttggca 16654674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 18006071 - 18006134
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    ||||||| || |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  18006071 cttcattatttctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggca 18006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 9069851 - 9069775
Alignment:
Q  68 tgggtatttgagtaatgacttcattgttgctaaaacaaatactcatg--tatgatgttggatacgatgttccaacat 142  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||  | ||||||||||||| |  |||||||||    
T  9069851 tgggtatttgagtattgacttcattgttgctaaaacaaatacccatgtttgtgatgttggatacaagtttccaacat 9069775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 2680581 - 2680503
Alignment:
Q  83 tgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||||||||||||| ||| ||| ||||||||||   ||||| |||||| |||| |||||||||||||    
T  2680581 tgacctcattgttgctaaaacaaatattcaagtaagatgttggatcaaatgtttcaacatgttggtacggttcagtgtg 2680503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 9069760 - 9069712
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  9069760 tgtaagatgttggatacgatgttccaacatcctggaacggttcagtgtg 9069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 18601008 - 18601051
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  18601008 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 18601051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 41786244 - 41786193
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgttt 169  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||| |||||    
T  41786244 gatgttggatatgatgttccaacatcctggcacggttcagtatgtcttgttt 41786193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 15623252 - 15623211
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggtt 154  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  15623252 tgtaagatgttggatacgatgttccaacatcctggcacggtt 15623211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 10725013 - 10724965
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||| ||| ||||||    
T  10725013 tgtaagatgttggatacgatgttccaacatcctggcacagtttagtgtg 10724965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 10938782 - 10938734
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| |||||| ||| ||||||    
T  10938782 tgtaagatgttggatacgatgttccaacatcctggcacagtttagtgtg 10938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 11324579 - 11324679
Alignment:
Q  59 ggagattgttgggtatttgagtaatgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcag 157  Q
    |||||||||||| ||||||  || || ||||| | |||| ||||||||||| ||||||  ||||||| | | ||||| |||||||||||||| |||||||    
T  11324579 ggagattgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcatggttcag 11324678  T
Q  158 t 158  Q
    |    
T  11324679 t 11324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 19183025 - 19183073
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  19183025 tgtaagatgttggatacgatgttctgacatcctggcacggttcagtgtg 19183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 15699684 - 15699727
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||    
T  15699684 gatgttggatccgatgttccaacatcctggcacagttcagtgtg 15699727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 15687049 - 15687107
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttc 155  Q
    |||||||||||| ||| || |||||||| | |||||||||||||||| ||||| |||||    
T  15687049 ctaaaacaaatattcaagtgtgatgttgtacacgatgttccaacatcctggcatggttc 15687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 16384813 - 16384758
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    ||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  16384813 ccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 16384758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 11905877 - 11905837
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    ||||||||| |||||||||||||||| ||||| ||||||||    
T  11905877 gatgttggacacgatgttccaacatcctggcatggttcagt 11905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 31971520 - 31971480
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||||||||||||||| ||||||||||||||| | ||||||    
T  31971520 gttcctaaagatgttcctactttttaggagtttccatattt 31971480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 65 - 360
Target Start/End: Complemental strand, 41478 - 41179
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||||||| |  |||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| | ||||||||||     
T  41478 tgttgggtatttgagtatttgcttctttgttgctaaaacaaatgctcatgtataatattggatacgatgttccaacatcttggcacagctcagtgtgtca 41379  T
Q  165 tgtttgtgtggcttggttttcgcgaac--tttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctg 262  Q
    ||||| ||||||||||||| ||| | |  |||||||| ||||||||| |||| | |||||||||||||||||| |||   |||||||| ||||| |||||    
T  41378 tgtttatgtggcttggtttacgcaatctttttatcttattaaggaaagcacgccctatttcttgttcaccaagcaacgcgtttttgtctagaatcagctg 41279  T
Q  263 g-gtatttatttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |  ||||| ||| |||||||| | ||||||||||||||| |||||||||||||||||| |||| |||| |||||| ||||||||||||||| | ||||||    
T  41278 gaatatttgtttctaaaatatgaacaatattttaggatttcttggtggtgtgtttgacagttcttaaaaatgttcctactttttaggagttaccatattt 41179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 231
Target Start/End: Complemental strand, 36463 - 36252
Alignment:
Q  24 ctcagttagttttaa-caacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatact---catgtatga 119  Q
    ||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |   |||||||||    
T  36463 ctcagtttgttttaaacaacaaataaagccaaaggaggagattgttgggtatttgagtattgacttcattgttgctaaaaaaaataatattcatgtatga 36364  T
Q  120 tgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgactta 219  Q
    |||| || ||||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||| ||| | ||||||||| |||||||||||| | | ||    
T  36363 tgtttgacacgatgttccaacatcttggcacggttgagcgtgccctgtttatgtggtttggtttacgcaatctttatcttattaaggaaaccatggccta 36264  T
Q  220 tttcttgttcac 231  Q
    ||||||||||||    
T  36263 tttcttgttcac 36252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 113 - 365
Target Start/End: Original strand, 51471434 - 51471687
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaacca 212  Q
    |||| ||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||  ||||||||| ||||||||||||    
T  51471434 tgtacgatgttggatatgaagttccaacatcctggcacggttcagtgtgccctgtttgtgtggcttgattttcacgcgctttatcttattaaggaaacca 51471533  T
Q  213 cgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggtatttatttttaaaatatag-caatattttaggattccttggtggtgt 311  Q
    || |||| ||||||||||||||||||  | |||||||||||||| | |||||   || ||  |||| |||||  ||||||||||||||||||||||||||    
T  51471534 cgtcttaattcttgttcaccaagtaatgtgtttttgtccagaatcaactgggagatttttcctaaagtatagaaaatattttaggattccttggtggtgt 51471633  T
Q  312 gtttgacggttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
     || | | |||||||||||||||| ||||||||| |||||||||| ||| ||||    
T  51471634 tttaggcagttcctaaagatgttcttactttttaagagttgctatttttgttac 51471687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 12753971 - 12753828
Alignment:
Q  18 catggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtat 117  Q
    |||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||    
T  12753971 catgacctcagtttgttttaacaacaaataaatccaacgggggagattgttgggtatttgagtgttggcttcattgttgctaaaacaaatactcatatat 12753872  T
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  12753871 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 12753828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 22347920 - 22348036
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||| |    
T  22347920 ttgttgggtatttgggtattggcttcattgttgctaaaacaaatactcatgtatg---ttggatacgatgttctaacatcttggcacggttcagtgtgcc 22348016  T
Q  164 ctgtttgtgtggcttggttt 183  Q
    |||||| |||||||||||||    
T  22348017 ctgtttatgtggcttggttt 22348036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 8282784 - 8282635
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||| |||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| | |     
T  8282784 tgttaggtatttgagtattggcctcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcctgacacagttcagtgagcct 8282685  T
Q  165 tgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacg 214  Q
    ||||| |||| |||| ||| | ||  ||||||||| | |||||| |||||    
T  8282684 tgtttatgtgccttgttttacccgcgctttatcttatcaaggaatccacg 8282635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 360
Target Start/End: Original strand, 47940373 - 47940563
Alignment:
Q  171 tgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-attt 269  Q
    ||||||||| ||| ||| | ||||||||| |||||||||||||| |||||||| ||||||||||  |||   ||||  |||||||| |||| |   ||||    
T  47940373 tgtggcttgatttacgcaatctttatcttattaaggaaaccacgccttatttcatgttcaccaaacaacgcgtttta-tccagaatcagctagaagattt 47940471  T
Q  270 atttttaaaatat-agcaatattttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
     ||| ||||| || | |||||||||||||||| ||||  ||||||||| |||||||||||  ||||| ||||||||||||||| | ||||||    
T  47940472 gtttctaaaacatgaacaatattttaggattctttggcagtgtgtttggcggttcctaaaagtgttcctactttttaggagttaccatattt 47940563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 47940306 - 47940368
Alignment:
Q  19 atggcctcagttagttttaacaacaaataaatccaaaggcggagattgttgggtatttgagta 81  Q
    |||||||| ||| |||||||||||||||||||||||| | | |||||||||||||||||||||    
T  47940306 atggcctcggtttgttttaacaacaaataaatccaaaagggaagattgttgggtatttgagta 47940368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 51471345 - 51471430
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||||  |||||||  |||||||||| | |||| |||||||||||||    
T  51471345 ttgttggatatttgtgtattgacttcattattgctaaaacaaatgttcatgtaccatgttggatatgttgtttcaacatcttggca 51471430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 10339502 - 10339550
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  10339502 tgtaagatgttggatacgatgttccaacatcttgacacggttcagtgtg 10339550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 17355367 - 17355416
Alignment:
Q  311 tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  17355367 tgtttggcggttcctaaagatgtttatactttttaggagatgctatattt 17355416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 18379388 - 18379489
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    ||||||||||||| ||  || | ||||| ||| ||||| ||||| ||||| | |||||||||||||||||| |||||| | || ||||||||||||| ||    
T  18379388 tgttgggtatttgtgtgttggcctcattattgttaaaaaaaatattcatgcaagatgttggatacgatgtttcaacatgtgggtacggttcagtgtgccc 18379487  T
Q  165 tg 166  Q
    ||    
T  18379488 tg 18379489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 20200432 - 20200477
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||    
T  20200432 tgtaagatgttggatacgatgttccaacatcctggcacggttcagt 20200477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 22891080 - 22891192
Alignment:
Q  52 caaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgt-----atgatgttggatacgatgttccaacatcttg 146  Q
    |||||| |||||||||||||||||||  || || || |||||||||||||| |||||  | |||     | | |||||||||| ||||||||||||| ||    
T  22891080 caaagggggagattgttgggtatttg--tattggctgcattgttgctaaaataaatatccttgttgtgtaagttgttggatactatgttccaacatcctg 22891177  T
Q  147 gcacggttcagtgtg 161  Q
    |||||||||||||||    
T  22891178 gcacggttcagtgtg 22891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 26971746 - 26971789
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  26971746 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 26971789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 11667246 - 11667296
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    |||| |||||||||||||||||||||||||| |||||| ||| ||||||||    
T  11667246 tgtaagatgttggatacgatgttccaacatcatggcacagttaagtgtgtc 11667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 15914804 - 15914930
Alignment:
Q  130 gatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgttc 229  Q
    |||||| |||||||||| |||||||||||||| | ||||| |||| || | | | | |   ||||||||| ||||||||  |||| |||||||||||||     
T  15914804 gatgttgcaacatcttgacacggttcagtgtgccttgtttatgtgtctagttgtacacacgctttatcttattaaggaattcacgccttatttcttgttg 15914903  T
Q  230 accaagtaacatatttttgtccagaat 256  Q
      |||||||||  ||||||||||||||    
T  15914904 gtcaagtaacacgtttttgtccagaat 15914930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 17379159 - 17379208
Alignment:
Q  311 tgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    |||||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  17379159 tgtttggcggttcctaaagatgtttctactttttaggagatgctatattt 17379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 18389392 - 18389509
Alignment:
Q  47 aaatccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatga----tgttggatacgatgttccaacat 142  Q
    |||||||||||  ||||||||||| |||||| ||| || | ||||| ||||||||||||||| ||||| | ||    ||||||||||||||||  |||||    
T  18389392 aaatccaaaggatgagattgttggatatttgtgtattggcctcattattgctaaaacaaatattcatgcaagatgtttgttggatacgatgtttaaacat 18389491  T
Q  143 cttggcacggttcagtgtg 161  Q
      ||| |||||||||||||    
T  18389492 -gtggtacggttcagtgtg 18389509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 20840607 - 20840655
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| || ||| ||||||||||    
T  20840607 tgtaagatgttggatacgatgttccaacatcctgacacagttcagtgtg 20840655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 23477279 - 23477327
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||| |||||| |||| |||||||||||||||||||||||||| ||||    
T  23477279 tgtataatgttgaatacaatgttccaacatcttggcacggttcaatgtg 23477327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 24986799 - 24986751
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  24986799 tgtaagatgttggatacaatgttccaacattctggcacggttcagtgtg 24986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 20200324 - 20200380
Alignment:
Q  50 tccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    |||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  20200324 tccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 20200380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 11085009 - 11085070
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||||||| ||||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  11085009 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 11085070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 25349571 - 25349620
Alignment:
Q  112 atgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||| ||||||||||| ||| |||||||||| ||||| |||||||||||    
T  25349571 atgtaagatgttggatatgatattccaacatcctggcatggttcagtgtg 25349620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 33063194 - 33063133
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||||||| ||||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  33063194 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 33063133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 1626389 - 1626341
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||| |||||||||||||| ||| || ||||||||||    
T  1626389 tgtaagatgttggatatgatgttccaacatcctggaacagttcagtgtg 1626341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 23477209 - 23477264
Alignment:
Q  89 cattgttgctaaaacaaatactcatgta--tgatgttggatacgatgttccaacat 142  Q
    |||||||||||||||||||| |||| ||  || |||||||||| ||||||||||||    
T  23477209 cattgttgctaaaacaaatattcatatatgtgttgttggatactatgttccaacat 23477264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 45598645 - 45598741
Alignment:
Q  63 attgttgggtatttgagtaatgacttcattgttg-ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||| ||||||| || |  ||||||| ||| |||||||||||| | ||||  ||||||| | ||||||| |||||||| ||||| ||||||||    
T  45598645 attgttggatatttgaatattagcttcatttttggctaaaacaaatatttatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 45598741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 45263 - 45377
Alignment:
Q  65 tgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcc 164  Q
    |||||| |||||| ||  |||||||| | || |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  45263 tgttggatatttgtgtgttgacttcactttttctaaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggcatggttcagtgtgccc 45362  T
Q  165 tgtttgtgtggcttg 179  Q
    ||||| |||||||||    
T  45363 tgtttatgtggcttg 45377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 52231 - 52351
Alignment:
Q  59 ggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 158  Q
    |||||||||||| |||||| ||  || ||||| | |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52231 ggagattgttggatatttgtgtgttggcttcacttttgcaaaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggtacggttcagt 52330  T
Q  159 gtgtcctgtttgtgtggcttg 179  Q
    ||  ||||||| |||||||||    
T  52331 gtcccctgtttatgtggcttg 52351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 97 - 256
Target Start/End: Complemental strand, 5799 - 5639
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttat 196  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| ||||  |||| |||||   |||||||    
T  5799 ctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgtttatgtgtgttggctttcgtacactttat 5700  T
Q  197 ctttttaaggaaaccacgacttatttcttgttcaccaagtaac-atatttttgtccagaat 256  Q
    ||| |||||||  ||||| |||||||||||||| ||| |||||  | ||||||||||||||    
T  5699 cttattaaggattccacgccttatttcttgttcgccatgtaacgttctttttgtccagaat 5639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 12054 - 11944
Alignment:
Q  97 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttat 196  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| ||||  |||| |||||   |||||||    
T  12054 ctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgtttatgtgtgttggctttcgaacactttat 11955  T
Q  197 ctttttaagga 207  Q
    ||| |||||||    
T  11954 cttattaagga 11944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 120 - 348
Target Start/End: Original strand, 9393 - 9623
Alignment:
Q  120 tgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgactta 219  Q
    |||||||||  ||||||||||| | || ||||||  |||||| |||| || |||| |||||||| | || |||||||||||||||| |||  ||| ||||    
T  9393 tgttggatataatgttccaacagcctgacacggtagagtgtgccctggttttgtgacttggtttccacgcactttatctttttaagaaaataacgtctta 9492  T
Q  220 tttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caatattttaggattccttggtggtgtgtttga 317  Q
    | ||||||||||||| || | ||||||||||||||||   |||||| |||| ||| |||| |||||   ||||||||||||| ||||||| ||| |  |     
T  9493 tctcttgttcaccaaatatcgtatttttgtccagaatattctgggtgatttgtttctaaagtatagattatattttaggattacttggtgttgtttgcgg 9592  T
Q  318 cggttcctaaagatgttcatactttttagga 348  Q
    |||||||||||||||||| ||||||||||||    
T  9593 cggttcctaaagatgttcctactttttagga 9623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 9317 - 9373
Alignment:
Q  86 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacat 142  Q
    ||||||| |||||||||||||||||| ||| |||||||||| | | |||||||||||    
T  9317 cttcattattgctaaaacaaatactcttgtttgatgttggaaatgttgttccaacat 9373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 50204 - 50368
Alignment:
Q  64 ttgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtc 163  Q
    ||||||| |||||| ||  || ||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||||| | |||| |||||||||| |    
T  50204 ttgttggatatttgtgtgttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttcagtgtgcc 50303  T
Q  164 ctgtttgtgtggcttggttttcgcgaactttatctttttaaggaaaccacgacttatttcttgtt 228  Q
    |||    |||| |  | |||  ||   |||||||||||||||||||||||| |||||||||||||    
T  50304 ctgaagttgtgccaagatttatgcacgctttatctttttaaggaaaccacgccttatttcttgtt 50368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 73799 - 73844
Alignment:
Q  320 gttcctaaagatgttcatactttttaggagttgctatatttattac 365  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||    
T  73799 gttcctaaagatgttcctactttttaggagtttccatatttgttac 73844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 12059 - 11943
Alignment:
Q  50 tccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggca 149  Q
    |||||| | |||||||||||| ||||||  |  ||||| || | ||||||||||||||| ||| || |||||||||| |||||||| ||||||| |||||    
T  12059 tccaaaaggggagattgttggatatttgtatgttgactgcacttttgctaaaacaaataatcaagtgtgatgttggacacgatgtttcaacatcctggca 11960  T
Q  150 cggttcagtgtgtcctg 166  Q
    |||||||||||| ||||    
T  11959 cggttcagtgtgccctg 11943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 360
Target Start/End: Original strand, 9952 - 10123
Alignment:
Q  191 ctttatctttttaaggaaaccacgacttatttcttgttcaccaagtaacatatttttgtccagaattagctgggt-atttatttttaaaatatag-caat 288  Q
    ||||||||| |||| |||| | || | |||||||||||||||||| | |  | ||||||||||||| ||||||   |||| |||  ||||||||  ||||    
T  9952 ctttatcttattaaagaaatctcgccctatttcttgttcaccaagcagcgcacttttgtccagaatcagctggaagatttgtttcaaaaatataaacaat 10051  T
Q  289 attttaggattccttggtggtgtgtttgacggttcctaaagatgttcatactttttaggagttgctatattt 360  Q
    | ||| |||||| ||| ||||||||||| |||||||||||||||||| |||| |||||||||| | ||||||    
T  10052 acttttggattctttgatggtgtgtttggcggttcctaaagatgttcctactctttaggagttaccatattt 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 778 - 730
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  778 tgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtg 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 874 - 822
Alignment:
Q  63 attgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgt 115  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  874 attgttgggtatttgagtattgtcttcattgttgctaaaacaaatattcatgt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 16316 - 16273
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  16316 gatgttggatacgatgttccaacatcctggcacggttcagtgtg 16273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 15964 - 16012
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  15964 tgtaagatgttggatacgatgttccaacatcctggcacggttcggtgtg 16012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 1711 - 1759
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||    
T  1711 tgtaagatgttggatacgatgttccaacattctggcacggttcagtgtg 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 14439 - 14348
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacat 142  Q
    ||||||| |||||||||||| ||||||  |  || | ||||| ||  ||||||||||| ||||| | |||||||||||||||||||||||||    
T  14439 ccaaagggggagattgttggatatttgtatgttggcctcattatttttaaaacaaatattcatgcaagatgttggatacgatgttccaacat 14348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 25026 - 25069
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  25026 gatgttggatacgatgctccaacatcctggcacggttcagtgtg 25069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 24914 - 24969
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    ||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  24914 ccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 24969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 9483 - 9442
Alignment:
Q  120 tgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  9483 tgttggatacaatgttccaacttcttggcacggttcagtgtg 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 38122 - 38074
Alignment:
Q  112 atgtatgatgttggatacgatgttccaacatcttggcacggttcagtgt 160  Q
    ||||| |||||||||||||||||||||||||| |||||| ||| |||||    
T  38122 atgtaagatgttggatacgatgttccaacatcctggcacagttaagtgt 38074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 6882 - 6933
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatc-ttggcacggttcagtgtgtc 163  Q
    |||| ||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  6882 tgtaagattttggatatgatgttccaacatccttggcacggttcagtgtgtc 6933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 47739 - 47782
Alignment:
Q  118 gatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||||||||||||||  ||||||||| |||||||||||||||||    
T  47739 gatgttggatacgatactccaacatcctggcacggttcagtgtg 47782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 2812 - 2757
Alignment:
Q  51 ccaaaggcggagattgttgggtatttgagtaatgacttcattgttgctaaaacaaata 108  Q
    ||||||| ||||||||||||||||||  ||| || || ||||||||||||||||||||    
T  2812 ccaaagggggagattgttgggtattt--gtattggctgcattgttgctaaaacaaata 2757  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 37400 - 37358
Alignment:
Q  119 atgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    ||||||||||| ||||||||||||| || ||||||||||||||    
T  37400 atgttggatacaatgttccaacatcctgacacggttcagtgtg 37358  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 88562 - 88514
Alignment:
Q  113 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 161  Q
    |||| |||||||||||| ||||||||||||| || || |||||||||||    
T  88562 tgtaagatgttggatacaatgttccaacatcctgacatggttcagtgtg 88514  T

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