View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7860_low_8 (Length: 260)

Name: NF7860_low_8
Description: NF7860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7860_low_8
NF7860_low_8
[»] chr4 (34 HSPs)
chr4 (141-241)||(21660106-21660206)
chr4 (141-241)||(21668870-21668970)
chr4 (32-100)||(21659141-21659209)
chr4 (141-238)||(28635713-28635810)
chr4 (141-238)||(51948497-51948594)
chr4 (141-232)||(7949416-7949507)
chr4 (141-231)||(12793873-12793963)
chr4 (141-230)||(37274421-37274510)
chr4 (144-232)||(13015450-13015538)
chr4 (33-101)||(21664226-21664298)
chr4 (33-101)||(21672990-21673062)
chr4 (141-230)||(51954139-51954228)
chr4 (141-225)||(19680750-19680834)
chr4 (144-229)||(14451711-14451796)
chr4 (163-232)||(37109335-37109404)
chr4 (141-232)||(37443725-37443813)
chr4 (163-232)||(38869791-38869860)
chr4 (144-225)||(39509100-39509181)
chr4 (141-222)||(47386753-47386834)
chr4 (141-238)||(51250484-51250581)
chr4 (141-225)||(8030166-8030250)
chr4 (191-238)||(47044734-47044781)
chr4 (163-217)||(8306523-8306577)
chr4 (191-241)||(24827839-24827889)
chr4 (161-230)||(2622377-2622446)
chr4 (184-237)||(17618299-17618352)
chr4 (144-237)||(43728413-43728505)
chr4 (204-241)||(56236940-56236977)
chr4 (141-241)||(13901756-13901856)
chr4 (163-231)||(23377980-23378048)
chr4 (184-232)||(25869582-25869630)
chr4 (141-225)||(32992642-32992726)
chr4 (198-234)||(42644929-42644965)
chr4 (141-241)||(46295111-46295211)
[»] chr3 (36 HSPs)
chr3 (141-238)||(2667879-2667976)
chr3 (144-232)||(28531023-28531111)
chr3 (141-241)||(4844473-4844573)
chr3 (141-241)||(4870169-4870269)
chr3 (159-232)||(4222164-4222237)
chr3 (141-238)||(10499071-10499168)
chr3 (141-241)||(13808847-13808947)
chr3 (141-241)||(36720395-36720495)
chr3 (141-232)||(51903840-51903931)
chr3 (141-222)||(52769945-52770026)
chr3 (141-216)||(49397503-49397578)
chr3 (141-231)||(11090127-11090217)
chr3 (144-230)||(31520570-31520656)
chr3 (141-230)||(10445101-10445190)
chr3 (141-238)||(11612316-11612413)
chr3 (141-225)||(44743817-44743901)
chr3 (141-232)||(49494108-49494199)
chr3 (141-238)||(5499369-5499466)
chr3 (141-238)||(14339627-14339724)
chr3 (141-241)||(7673283-7673383)
chr3 (141-241)||(12761526-12761626)
chr3 (163-231)||(31788955-31789022)
chr3 (149-232)||(43417337-43417419)
chr3 (144-202)||(13448376-13448434)
chr3 (163-225)||(15048045-15048107)
chr3 (163-225)||(28703388-28703450)
chr3 (163-225)||(30311336-30311398)
chr3 (163-217)||(53412983-53413037)
chr3 (159-232)||(14186671-14186743)
chr3 (141-238)||(16991559-16991656)
chr3 (189-225)||(7975448-7975484)
chr3 (141-225)||(8075089-8075173)
chr3 (148-212)||(19307886-19307950)
chr3 (163-231)||(27259185-27259253)
chr3 (144-216)||(33861699-33861771)
chr3 (144-216)||(33899653-33899725)
[»] chr5 (27 HSPs)
chr5 (141-241)||(16773821-16773921)
chr5 (141-232)||(29075804-29075895)
chr5 (141-241)||(1410623-1410721)
chr5 (141-214)||(29210399-29210472)
chr5 (191-241)||(14495817-14495867)
chr5 (141-214)||(29173531-29173604)
chr5 (141-232)||(6844752-6844843)
chr5 (148-241)||(43241651-43241744)
chr5 (141-237)||(19949578-19949673)
chr5 (141-241)||(29692348-29692448)
chr5 (142-237)||(1279010-1279104)
chr5 (163-241)||(34984820-34984898)
chr5 (175-224)||(12883871-12883920)
chr5 (141-238)||(21589305-21589402)
chr5 (141-241)||(8278237-8278337)
chr5 (163-238)||(16457827-16457902)
chr5 (141-216)||(17028226-17028301)
chr5 (141-220)||(43442231-43442310)
chr5 (141-231)||(9842808-9842898)
chr5 (163-241)||(30883182-30883260)
chr5 (163-225)||(37258350-37258412)
chr5 (144-214)||(8779273-8779345)
chr5 (195-232)||(15641808-15641845)
chr5 (163-216)||(25627096-25627149)
chr5 (141-225)||(84854-84938)
chr5 (161-241)||(21086728-21086808)
chr5 (141-225)||(22020824-22020908)
[»] chr8 (30 HSPs)
chr8 (147-238)||(23361617-23361708)
chr8 (141-238)||(968379-968476)
chr8 (141-232)||(6536543-6536634)
chr8 (141-232)||(11492035-11492126)
chr8 (150-232)||(35690035-35690117)
chr8 (142-234)||(3305151-3305243)
chr8 (141-232)||(16852363-16852454)
chr8 (141-231)||(31087220-31087310)
chr8 (141-238)||(8485016-8485113)
chr8 (144-232)||(2203515-2203603)
chr8 (144-232)||(3624603-3624690)
chr8 (163-231)||(6569755-6569823)
chr8 (141-241)||(10287489-10287589)
chr8 (141-225)||(11819806-11819890)
chr8 (141-225)||(27750760-27750844)
chr8 (198-234)||(28636362-28636398)
chr8 (198-234)||(28644096-28644132)
chr8 (198-234)||(28653048-28653084)
chr8 (141-237)||(28783078-28783174)
chr8 (141-220)||(36205230-36205307)
chr8 (141-232)||(12281517-12281608)
chr8 (141-187)||(7347905-7347951)
chr8 (144-238)||(29858014-29858108)
chr8 (141-231)||(31088697-31088787)
chr8 (141-238)||(7140726-7140822)
chr8 (141-210)||(40791857-40791926)
chr8 (141-214)||(43968960-43969033)
chr8 (141-230)||(44780076-44780165)
chr8 (141-229)||(35583625-35583713)
chr8 (141-212)||(44595817-44595889)
[»] scaffold0258 (1 HSPs)
scaffold0258 (141-241)||(15285-15385)
[»] chr7 (32 HSPs)
chr7 (141-225)||(5934151-5934235)
chr7 (141-224)||(7721400-7721483)
chr7 (141-232)||(41519227-41519317)
chr7 (141-238)||(15137570-15137667)
chr7 (141-238)||(30579352-30579449)
chr7 (141-241)||(2446322-2446422)
chr7 (141-237)||(21558146-21558242)
chr7 (144-216)||(42711997-42712069)
chr7 (141-237)||(48771956-48772052)
chr7 (141-232)||(25590634-25590725)
chr7 (141-219)||(9183153-9183231)
chr7 (191-241)||(22760877-22760927)
chr7 (141-231)||(26703149-26703239)
chr7 (141-238)||(19553471-19553567)
chr7 (163-232)||(26459394-26459463)
chr7 (141-225)||(22035428-22035512)
chr7 (141-225)||(45709670-45709754)
chr7 (159-214)||(2882991-2883046)
chr7 (143-222)||(21410674-21410753)
chr7 (141-232)||(43663057-43663148)
chr7 (141-231)||(279916-280005)
chr7 (141-215)||(7309396-7309469)
chr7 (161-231)||(23552142-23552212)
chr7 (163-225)||(29785285-29785347)
chr7 (163-241)||(33222384-33222462)
chr7 (141-238)||(5273552-5273649)
chr7 (163-232)||(25655212-25655281)
chr7 (141-238)||(43590924-43591021)
chr7 (193-241)||(23595743-23595791)
chr7 (141-213)||(35513508-35513580)
chr7 (193-237)||(37085563-37085607)
chr7 (141-189)||(46572172-46572220)
[»] chr1 (43 HSPs)
chr1 (141-231)||(12587294-12587383)
chr1 (141-232)||(17745219-17745309)
chr1 (163-241)||(15786304-15786382)
chr1 (141-238)||(40257416-40257513)
chr1 (141-238)||(44126412-44126509)
chr1 (141-237)||(42983336-42983432)
chr1 (141-232)||(6650618-6650709)
chr1 (147-228)||(17439944-17440026)
chr1 (163-235)||(8904434-8904506)
chr1 (141-241)||(25297786-25297886)
chr1 (144-232)||(51814517-51814605)
chr1 (141-232)||(9643771-9643862)
chr1 (141-232)||(16893417-16893508)
chr1 (141-232)||(31794226-31794317)
chr1 (161-219)||(6948059-6948117)
chr1 (162-232)||(33700756-33700826)
chr1 (163-225)||(42412664-42412726)
chr1 (141-238)||(2069673-2069769)
chr1 (163-232)||(8177166-8177235)
chr1 (163-232)||(9165179-9165248)
chr1 (198-231)||(9964462-9964495)
chr1 (141-238)||(52116743-52116840)
chr1 (163-232)||(52336758-52336827)
chr1 (141-225)||(6122824-6122908)
chr1 (141-237)||(9879456-9879552)
chr1 (141-225)||(12370193-12370277)
chr1 (141-213)||(15065007-15065079)
chr1 (141-213)||(28283573-28283645)
chr1 (162-238)||(28411347-28411423)
chr1 (141-232)||(1094548-1094639)
chr1 (141-232)||(7219880-7219971)
chr1 (141-232)||(10526846-10526937)
chr1 (141-232)||(27476733-27476824)
chr1 (163-225)||(2799892-2799954)
chr1 (141-238)||(2074019-2074115)
chr1 (181-230)||(11687626-11687675)
chr1 (148-241)||(12662296-12662389)
chr1 (191-232)||(27223142-27223183)
chr1 (141-214)||(42949254-42949327)
chr1 (141-230)||(50901607-50901695)
chr1 (141-237)||(10150831-10150927)
chr1 (141-213)||(44961807-44961879)
chr1 (141-237)||(48619171-48619267)
[»] chr2 (23 HSPs)
chr2 (148-241)||(41202264-41202357)
chr2 (141-232)||(28846714-28846805)
chr2 (141-224)||(33582004-33582087)
chr2 (141-212)||(33569820-33569891)
chr2 (141-232)||(42602577-42602668)
chr2 (141-227)||(30907590-30907676)
chr2 (191-237)||(39715010-39715056)
chr2 (141-225)||(1435094-1435177)
chr2 (141-241)||(19016045-19016145)
chr2 (141-241)||(21213783-21213883)
chr2 (141-232)||(3001402-3001493)
chr2 (141-224)||(25637182-25637265)
chr2 (141-232)||(42327357-42327448)
chr2 (170-224)||(16918569-16918623)
chr2 (142-232)||(19244132-19244222)
chr2 (159-232)||(11251110-11251183)
chr2 (141-238)||(12086091-12086188)
chr2 (148-237)||(29197345-29197434)
chr2 (163-232)||(30410533-30410602)
chr2 (141-230)||(35203345-35203433)
chr2 (141-238)||(37480092-37480189)
chr2 (141-241)||(31573603-31573703)
chr2 (191-231)||(42860372-42860412)
[»] chr6 (26 HSPs)
chr6 (141-241)||(33549118-33549218)
chr6 (141-231)||(12633033-12633123)
chr6 (143-241)||(30127414-30127512)
chr6 (141-238)||(6758384-6758481)
chr6 (141-221)||(1992209-1992289)
chr6 (195-232)||(9433606-9433643)
chr6 (141-238)||(12234469-12234566)
chr6 (141-221)||(9626066-9626146)
chr6 (141-241)||(11423580-11423680)
chr6 (193-237)||(24641204-24641248)
chr6 (141-241)||(31622953-31623053)
chr6 (141-232)||(346554-346644)
chr6 (141-232)||(3715475-3715566)
chr6 (141-238)||(32613102-32613199)
chr6 (141-225)||(20213071-20213155)
chr6 (141-225)||(22107094-22107178)
chr6 (141-232)||(6385885-6385976)
chr6 (163-238)||(6776591-6776666)
chr6 (141-224)||(16405116-16405198)
chr6 (180-231)||(21943429-21943480)
chr6 (171-225)||(15951294-15951348)
chr6 (141-238)||(21418487-21418584)
chr6 (141-214)||(24256784-24256857)
chr6 (163-224)||(28363968-28364029)
chr6 (141-241)||(14557976-14558075)
chr6 (142-214)||(28841455-28841527)
[»] scaffold0299 (1 HSPs)
scaffold0299 (163-238)||(11545-11620)
[»] scaffold0032 (1 HSPs)
scaffold0032 (141-238)||(112299-112396)
[»] scaffold0118 (1 HSPs)
scaffold0118 (141-232)||(41595-41686)
[»] scaffold0074 (1 HSPs)
scaffold0074 (159-234)||(45739-45814)
[»] scaffold0044 (1 HSPs)
scaffold0044 (141-232)||(92970-93061)
[»] scaffold0002 (1 HSPs)
scaffold0002 (162-232)||(94954-95024)
[»] scaffold0300 (1 HSPs)
scaffold0300 (141-225)||(4370-4454)
[»] scaffold0065 (1 HSPs)
scaffold0065 (141-225)||(12219-12303)
[»] scaffold1367 (1 HSPs)
scaffold1367 (144-238)||(805-899)
[»] scaffold0194 (1 HSPs)
scaffold0194 (163-237)||(13030-13104)
[»] scaffold0368 (1 HSPs)
scaffold0368 (141-214)||(14927-15000)
[»] scaffold0027 (1 HSPs)
scaffold0027 (147-224)||(139897-139974)
[»] scaffold0021 (1 HSPs)
scaffold0021 (144-232)||(156954-157040)
[»] scaffold0591 (1 HSPs)
scaffold0591 (198-234)||(5646-5682)


Alignment Details
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 21660106 - 21660206
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||| | |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  241 c 241  Q
    |    
T  21660206 c 21660206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 21668870 - 21668970
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||| | |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  241 c 241  Q
    |    
T  21668970 c 21668970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 21659141 - 21659209
Alignment:
Q  32 aaaatgtgtgacacaaataagttattaaagtttatactgttttcttttttgaatcataaagtttatact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21659141 aaaatgtgtgacacaaataagttattaaagtttatactgttttcttttttgaatcataaagtttatact 21659209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 28635810 - 28635713
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | ||| |||||| ||||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||||| ||| |||||    
T  28635810 aagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccag 28635713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 51948594 - 51948497
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||| |||||||||| |  |||||||||||  |||| |||||||| | |||||||||||| | ||||||||| |||||||||||||||||||||||    
T  51948594 aagaagttaaattagtccatttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccag 51948497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 7949416 - 7949507
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | |||||||||||||||||||| ||| |||| | |||||| ||||| ||||||||||| || ||||||| ||||||    
T  7949416 aagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 7949507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 12793873 - 12793963
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||| | |||||||||| ||||||||| ||| |||| ||| || ||| |||||||||||||| ||||||| ||| |||||    
T  12793873 aagaagctaaattagcccacctaaattggcaccagagagaatcgaacttaatacttcgtggaagagcacactcacagatccgaagccaata 12793963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 37274421 - 37274510
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||| | || ||||||  ||||||||| ||| |||| |||||||| ||||| |||||||||||||| ||||||| ||||    
T  37274421 aagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 13015538 - 13015450
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||  | ||||||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||  ||||||| ||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatac 13015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 21664226 - 21664298
Alignment:
Q  33 aaatgtgtgacacaaat---aagttattaaagtttatactgttttctttt-ttgaatcataaagtttatacta 101  Q
    ||||||||||||||||    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  21664226 aaatgtgtgacacaaaataaaagttattaaagttcatactattttctttttttgaatcataaagtttatacta 21664298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 21672990 - 21673062
Alignment:
Q  33 aaatgtgtgacacaaat---aagttattaaagtttatactgttttctttt-ttgaatcataaagtttatacta 101  Q
    ||||||||||||||||    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  21672990 aaatgtgtgacacaaaataaaagttattaaagttcatactattttctttttttgaatcataaagtttatacta 21673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 51954228 - 51954139
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||| | ||| ||||||||||| |||| |||  ||| | |||||||||||| ||||| |||||||  ||||||||||||    
T  51954228 aagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaat 51954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 19680750 - 19680834
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||| ||  || | ||||||| ||||||||| ||| |||| |||||||| |||||||||||||||||||  |||||||    
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaag 19680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 14451711 - 14451796
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaa 229  Q
    |||||||||||  | || |||||||||||| |  | |||||||| |||||||| ||||| |||||||||| || ||||||||||||    
T  14451711 aagctaaattatcccacttaaattgacaccgggaaaaattgaacctaagaccttgaggaggagcacactctcatatcccaagtcaa 14451796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 37109335 - 37109404
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| ||| |||| | |||||| ||||| |||||||||||||| ||||||| ||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 37109404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 37443813 - 37443725
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||| ||||||||| | || ||||||| ||||||||| ||| |||||| | ||||||||||   | |||||||||||||||||| ||||||    
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgagga---gtacactcccagatcccaagccaatac 37443725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 38869860 - 38869791
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||  ||| |||| | |||||| ||||| |||||||||||||||||||||| ||||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 38869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 39509181 - 39509100
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||||||  | |||||||||| |||  | || ||| |||| | |||||||||||| ||||||||||||||||||||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaag 39509100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 47386753 - 47386834
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatccc 222  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||| | ||||||| || |  ||| ||||| ||||||||    
T  47386753 aagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctcaagaagaagcgcactctcagatccc 47386834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 51250484 - 51250581
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | ||| |||||| |||| |||  ||| |||| | ||| || ||||  |||||||||||||||||||||| |||||| |||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccag 51250581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 8030166 - 8030250
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | |||||| ||||| |||||||||||||  |||||||    
T  8030166 aagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaag 8030250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 47044781 - 47044734
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||||||||| ||||| |||| |||||||||||||||||| |||||    
T  47044781 agacctcgaggaggagcaaactctcagatcccaagtcaataccaccag 47044734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 8306577 - 8306523
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccag 217  Q
    |||||||||| ||||| ||| |||| |||||| ||||||| ||||||||||||||    
T  8306577 aaattgacactagagagaatcgaacttaagacttcgaggaggagcacactcccag 8306523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 24827889 - 24827839
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||||| |||| ||||||||| |||||||||||||| ||| ||||    
T  24827889 agacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggacc 24827839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 2622377 - 2622446
Alignment:
Q  161 ctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    |||||||| ||||||||| ||| |||| | |||| | ||||| |||||||||||||| ||||||| ||||    
T  2622377 ctaaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 17618352 - 17618299
Alignment:
Q  184 gaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||| |||||||||||| |||||||||||||| || |||| |||||| ||||    
T  17618352 gaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 17618299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 43728505 - 43728413
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||||||| | |||||| |||||||  || | |||||||| | |||| | ||||| |||||||||||||||||  |||||||||| ||||    
T  43728505 aagctaaattagcccacctaagttgacactgga-agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccacca 43728413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 56236940 - 56236977
Alignment:
Q  204 gagcacactcccagatcccaagtcaatactaccagacc 241  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  56236940 gagcacactcccatatcccaagtcaataccaccagacc 56236977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 13901856 - 13901756
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||  | ||||||||| |||  ||| | |||||||| | ||||||| |||| || ||||||||||| || |||| |||||| || ||||    
T  13901856 aagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagac 13901757  T
Q  241 c 241  Q
    |    
T  13901756 c 13901756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 23378048 - 23377980
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||| ||| ||||| ||| |||| | |||||| ||||| |||||||||||||| ||||||| |||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 25869582 - 25869630
Alignment:
Q  184 gaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||| | ||||| |||||||||| |||||| |||||||||||    
T  25869582 gaacataagactttgaggaggagcacactctcagatctcaagtcaatac 25869630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 32992726 - 32992642
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||| ||||| ||  ||||||||||| | || ||| |||| | |||||| ||||| ||||||||||| || |||||||    
T  32992726 aagaagctaaactagtccactcaaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaag 32992642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 42644929 - 42644965
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaatacta 234  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  42644929 gaggaagaacacactctcagatcccaagtcaatacta 42644965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 46295211 - 46295111
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||| ||| | ||| |||||| |||| | || ||| |||| | |||||| ||||| ||||||||||| |  ||||||| ||| ||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagac 46295112  T
Q  241 c 241  Q
    |    
T  46295111 c 46295111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 2667976 - 2667879
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||| | |||||||||||||| ||||| ||| |||| | ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  2667976 aagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccag 2667879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 28531023 - 28531111
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| | ||| |||||||||||||||| |||||| | |||||||||||||| ||||| |||||||||||||||| ||||||    
T  28531023 aagctaaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 4844473 - 4844573
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | ||  |||||| |||| |||| ||| || | | |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  4844473 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagac 4844572  T
Q  241 c 241  Q
    |    
T  4844573 c 4844573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 4870169 - 4870269
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | ||  |||||| |||| |||| ||| || | | |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  4870169 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagac 4870268  T
Q  241 c 241  Q
    |    
T  4870269 c 4870269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 4222237 - 4222164
Alignment:
Q  159 acctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||||||||||| ||| |||| |||||| | ||||| |||||||||||||||||||||| ||||||    
T  4222237 acctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaatac 4222164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 10499071 - 10499168
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | ||| ||||||||| | |||| ||| |||| | ||||||| |||||||||| |||||||||||||||| |||||| |||||    
T  10499071 aagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccag 10499168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 13808847 - 13808947
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||||||||||| || | | |||||||||  ||||| |||||||| | |||||| ||||| ||||||||| ||||||||||||||||||  |||||||    
T  13808847 aagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagac 13808946  T
Q  241 c 241  Q
    |    
T  13808947 c 13808947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 36720495 - 36720395
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||||||||  || | |||||||||||||| ||||| ||| |||| | | |||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  241 c 241  Q
    |    
T  36720395 c 36720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 51903840 - 51903931
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||  ||||||||||| |||| ||| |||| | ||||| |||||| |||||||||||||||||||||| ||||||    
T  51903840 aagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatac 51903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 52769945 - 52770026
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatccc 222  Q
    ||||||||||||||| | |||||||||||||| | ||| ||| |||| | ||||||| |||| |||||||||||||||||||    
T  52769945 aagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 49397503 - 49397578
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    ||||||||||||||||| ||||||||||||| |  ||| ||| |||||| ||||||||||||  ||||||||||||    
T  49397503 aagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactccca 49397578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 11090127 - 11090217
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||  |||| |||||||||||  || | ||| |||  |||||||||||||| ||||||| |||||||||||||| |||||    
T  11090127 aagaagctaaattaacctacttaaattgacactcgaaagaatcgaaactaagacctcgaggaggagcacattcccagatcccaagccaata 11090217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 31520570 - 31520656
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    |||||||||||| | ||  ||||||||||  |||| |||  ||| |||||||||||||| |||||||||||||||||||||| ||||    
T  31520570 aagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaat 31520656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 10445101 - 10445190
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||| | ||  |||||  ||||||||| ||| |||| | |||||||||||| |||||||||||||| ||||||| ||||    
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 11612413 - 11612316
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||||| |||||||||| |||| | ||  || |||| | ||||||  |||| |||||||||||||| |||||||| ||||| |||||    
T  11612413 aagaagctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccag 11612316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 44743817 - 44743901
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||  | ||| |||||| |||  |||| ||| |||| | |||||||||||| ||||||||||||||||||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 49494108 - 49494199
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||||| |||| ||| |||| || ||| || |||  ||| | |||||||||||||||||||||||||| ||  |||||||||||    
T  49494108 aagaagctaaattaatctatctagattggcatcagggagaatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaatac 49494199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 5499369 - 5499466
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||||||||||||||||   |||||| |||| | || ||| |||| | ||||||  |||| |||||||||| |||||| ||||||||||| |||||    
T  5499369 aagaagctaaattagtctattgaaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccag 5499466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 14339724 - 14339627
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||| ||||| ||| || || ||| |||| | |||| | ||||| ||||||||||||| |||||||| |||||| |||||    
T  14339724 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccag 14339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 7673383 - 7673283
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||| ||||||||||| |  ||||||||||  |||||  || |||| |||||||| ||| |  |||||||| ||| ||||||||||||||| |||||||    
T  7673383 aagaatctaaattagtccatttaaattgacattagagagtatcgaacctaagaccttgagaataagcacacttccaaatcccaagtcaataccaccagac 7673284  T
Q  241 c 241  Q
    |    
T  7673283 c 7673283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 12761626 - 12761526
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||| ||| ||| | |||||||||| |||| | || ||| |||| | ||| ||| |||| || ||||||||||| |||||||||||||| |||||||    
T  12761626 aagaagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagac 12761527  T
Q  241 c 241  Q
    |    
T  12761526 c 12761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 31788955 - 31789022
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||||||| ||||| |||  ||| ||| |||||||||| |||||||||||||||||||||| |||||    
T  31788955 aaattgacac-agagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaata 31789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 43417419 - 43417337
Alignment:
Q  149 aaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| || ||||||||||||||| ||   |||||||||| |||||| ||||| || |||||||| |||||||||| ||||||    
T  43417419 aaattaatccacctaaattgacaccgga-tgaattgaacatgagaccttgaggatgatcacactccaagatcccaagacaatac 43417337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 13448434 - 13448376
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgagga 202  Q
    |||||||||||| | |||||||||||||  ||||| |||||||| | ||||||||||||    
T  13448434 aagctaaattagcccacctaaattgacagtagagaaaattgaacctgagacctcgagga 13448376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 15048045 - 15048107
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||| ||||||||| ||| |||| | |||||| ||||| ||||||| ||||||||||||||    
T  15048045 aaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaag 15048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 28703388 - 28703450
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||| ||||||||| ||| |||| | |||||| || || ||||||||||||||||||||||    
T  28703388 aaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 28703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 30311398 - 30311336
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||| ||||| ||| ||| |||| | |||||| ||||| ||||||||||||||||||||||    
T  30311398 aaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaag 30311336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 53413037 - 53412983
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccag 217  Q
    |||||| ||||||||| |||||||| | |||||| ||||| ||||||||||||||    
T  53413037 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccag 53412983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 14186743 - 14186671
Alignment:
Q  159 acctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| |||| ||| |||| | |||||| ||||| ||||||||| |||| ||||||| ||||||    
T  14186743 acctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaatac 14186671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 16991656 - 16991559
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | || ||||||| || | |||| |||  ||  | ||||||| | |||||| |||||||||||||||||| |||||| |||||    
T  16991656 aagaagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccag 16991559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 7975484 - 7975448
Alignment:
Q  189 taagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  7975484 taagaccttgaggaggagcacactcccagatcccaag 7975448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 8075089 - 8075173
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | | |||| ||||| |||||||||||||  |||||||    
T  8075089 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaag 8075173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 19307886 - 19307950
Alignment:
Q  148 taaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacact 212  Q
    |||||||||| ||||||||||||||| || | |||||||||| ||| || || || |||||||||    
T  19307886 taaattagtccacctaaattgacaccggaaaaaattgaacatgagatcttgacgatgagcacact 19307950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 27259253 - 27259185
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||| |||||| |||  ||| | | |||||||||| |||||||||||||| ||||||| |||||    
T  27259253 aaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 33861699 - 33861771
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    |||||||||||| | ||||||||||| |   | || ||| |||||| |||||||||||| |||||||||||||    
T  33861699 aagctaaattagcccacctaaattgatattggggagaatcgaacattagacctcgaggaggagcacactccca 33861771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 33899725 - 33899653
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    ||||||||||||   ||| |||||||||||| ||| ||| |||| | |||||| ||||| |||||||||||||    
T  33899725 aagctaaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 16773921 - 16773821
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | |||||||||| || |||||| ||| |||| | |||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagac 16773822  T
Q  241 c 241  Q
    |    
T  16773821 c 16773821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 29075895 - 29075804
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | | |||||||| ||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||| ||||||    
T  29075895 aagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaatac 29075804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 1410623 - 1410721
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| ||||| || ||||||||| ||| ||| |||| | |||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  1410623 aagaagctaaattagcctacccaa-ttgacaccacagagaatcgaac-tgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagac 1410720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 29210472 - 29210399
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| | | |||||||||| |||||||||||    
T  29210472 aagaagctaaattagtccacctaaattgataccagagagaattgaacttgaaacctcgaggaggagcacactcc 29210399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 14495817 - 14495867
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  14495817 agacctcgaggaggagcacactcccagatcccaagtcaataccaccagacc 14495867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    ||||||||||||||| | |||||||||||||||||||| ||| |||| | | |||||||||| |||||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 6844843 - 6844752
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||| || || |||||||||| ||| ||||| ||| |||| | |||||||||||| || |||||||||| || ||||||||||||    
T  6844843 aagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaatac 6844752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 43241651 - 43241744
Alignment:
Q  148 taaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||| | |||||||| || |  ||| |||||||| | ||||||| |||||| ||||||||| ||||||||||||||||| || |||||    
T  43241651 taaattagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagacc 43241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 19949578 - 19949673
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||| |||||||||||| | ||||||||||| | || |||||||| | ||| |||||||| ||||||||| | ||||| ||||||||||| ||||    
T  19949578 aagaagttaaattagtctatccaaattgacaccggtgaaaattgaacctgagagctcgaggaggagcacact-ctagatctcaagtcaataccacca 19949673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 29692348 - 29692448
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||| ||||||||||| ||| |||||| || | |||| |||| ||| | |||| | ||||| |||||||||||||||||||||  |||||| |||||||    
T  29692348 aagaaactaaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagac 29692447  T
Q  241 c 241  Q
    |    
T  29692448 c 29692448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 1279104 - 1279010
Alignment:
Q  142 agaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||||||||||| ||| |||||||||||||||| |||  ||| | ||||||||| || |||||||||   ||||| ||||||||| ||||||    
T  1279104 agaagctaaattagtccacccaaattgacaccagagagaatctaacttgagacctcgatgaggagcacact-gtagatctcaagtcaatgctacca 1279010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 34984898 - 34984820
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||| ||||||||| ||| |||| |||||||| ||||| |||||||||||||| | ||||| |||||| || |||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagacc 34984820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 12883920 - 12883871
Alignment:
Q  175 gagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    |||| |||||||||| ||||||| |||| |||||||||||||||||||||    
T  12883920 gagagaattgaacatgagacctcaaggaggagcacactcccagatcccaa 12883871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 21589402 - 21589305
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||| | |||||||||| ||||||||  ||| |||| | |||| |||||||  |||| |||||||| ||||||| |||||| |||||    
T  21589402 aagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccag 21589305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 8278237 - 8278337
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | |||||||| | |||| |||| |||  ||| | ||| |||||||| |||||||||||||  ||||||| |||||| | |||||    
T  8278237 aagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagac 8278336  T
Q  241 c 241  Q
    |    
T  8278337 c 8278337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 16457902 - 16457827
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||| |||| | || |||||||||| |||||| ||||| ||||||||||| || ||||||| |||||| |||||    
T  16457902 aaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccag 16457827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 17028226 - 17028301
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    ||||||||||||||| | |||||||||||||| ||||  |||  ||| | |||||| ||||| |||||||||||||    
T  17028226 aagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactccca 17028301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 43442310 - 43442231
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatc 220  Q
    ||||| ||||||||| | | | ||||||||| |||||| ||| |||| | |||||| ||||| |||||||||||||||||    
T  43442310 aagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatc 43442231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 9842808 - 9842898
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||| |||||||| ||| |||||||  || | |||| | ||||||   |||||||||||| |||||||||||||  |||||||||||||    
T  9842808 aagaagttaaattagcctatctaaattatcatcggagagatttgaacccgagacctcgaggaggagcacactcccaagtcccaagtcaata 9842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 30883182 - 30883260
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    ||||||||||  | || |||||||| | |||||| ||||| |||||||||||||| ||||||| |||||| || |||||    
T  30883182 aaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagacc 30883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 37258350 - 37258412
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||||||||||| ||| |||| | | |||| ||||| ||||||||||| ||||||||||    
T  37258350 aaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaag 37258412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 8779273 - 8779345
Alignment:
Q  144 aagctaaattagtctacctaaattgacacca--gagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    |||||||||||||| ||||||||||||| ||  |||| ||| |||| | | |||||||||| |||||||||||    
T  8779273 aagctaaattagtcaacctaaattgacatcagtgagataatcgaacctgaaacctcgaggaggagcacactcc 8779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 15641808 - 15641845
Alignment:
Q  195 ctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  15641808 ctcgaggacgagcacactcccaggtcccaagtcaatac 15641845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 25627149 - 25627096
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    |||||||||||||||| ||| |||| | |||||| ||||| |||||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccca 25627096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 84938 - 84854
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| | | || |||| | || ||| |||| | |||||| ||||| ||||||||||||||||||||||    
T  84938 aagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaag 84854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 21086808 - 21086728
Alignment:
Q  161 ctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||||||||||| ||| |||  | ||| || ||||| ||||||||| |||||||| || ||||||| | ||||||    
T  21086808 ctaaattgacaccagagataatcgaatctgagatcttgaggaggagcacactgccagatcctaaatcaataccatcagacc 21086728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 22020824 - 22020908
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||| ||||||||| | ||||||||| ||||  |||| ||| |||  | |||| || |||| ||||||||||||||||||||||    
T  22020824 aagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaag 22020908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 23361617 - 23361708
Alignment:
Q  147 ctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||| | |||||||||||||||||||| |||||||| | |||||| ||||| ||||||||||||| ||||||||||||||| |||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccag 23361708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 968476 - 968379
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||||||||| || | |||| ||| |||| | |||||||||||| |||||||||||||| ||||||| |||||| |||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccag 968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 6536634 - 6536543
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||  | |||||||||| ||||||||| |||||||| | |||||| ||||| ||||||||||| || ||||||| ||||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 6536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 11492035 - 11492126
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||| ||||||||||   ||| ||| |||| |||||||||||| | ||||||||||||||||| |||| ||||||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatac 11492126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 35690035 - 35690117
Alignment:
Q  150 aattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| |||| ||||||||||||||||| ||| |||| | |||||| ||||| ||||| || ||||||||||||| ||||||    
T  35690035 aattagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatac 35690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 3305151 - 3305243
Alignment:
Q  142 agaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatacta 234  Q
    ||||| |||||||| | |||||||||| ||||||||| ||| |||  | |||||| ||||| |||||| ||||||||||||||  ||||||||    
T  3305151 agaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatacta 3305243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 16852454 - 16852363
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||| ||| | |||||||||| ||| |  || ||| |||| | |||||||||||| |||||||||||||| ||||||| ||||||    
T  16852454 aagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 16852363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 31087220 - 31087310
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||| |||||||| |||  |||||||||||| |||| ||| |||| | |||||||||||| | | | |||||||||||||||| |||||    
T  31087220 aagaagttaaattagcctatttaaattgacaccggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 8485113 - 8485016
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||||||||| |||| |||| ||| ||| || ||||||| | || |||||||||| ||| |||||||  ||||| |||||    
T  8485113 aagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccag 8485016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 2203603 - 2203515
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| | ||| |||||| |||| | || |||||| | | |||||| ||||| |||||||||||||| ||||||| ||||||    
T  2203603 aagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaatac 2203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 3624690 - 3624603
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| | |||||||||||| || |||| ||| |||| | |||||| || || |||||||||||||| ||||||| ||||||    
T  3624690 aagctaaattagcccacctaaattgac-ccggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaatac 3624603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 6569755 - 6569823
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||||||||| ||| ||| |||||| | ||||  |||| |||||||||||||||||||||| |||||    
T  6569755 aaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaata 6569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 10287589 - 10287489
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||| |||||||| | ||||||||||| |  |  || |||||||| | ||||||||||||  |||||||| ||||||  |||| ||||||||||||||    
T  10287589 aagaagataaattagcccacctaaattgatataaaggagaattgaacctgagacctcgaggagaagcacacttccagatttcaagccaatactaccagac 10287490  T
Q  241 c 241  Q
    |    
T  10287489 c 10287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 11819890 - 11819806
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | |||||| ||||| |||||||||||||  |||||||    
T  11819890 aagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 11819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 27750844 - 27750760
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||||| | | |||||||||| ||||  ||| |||| | |||||| ||||| |||||||||||||  |||||||    
T  27750844 aagaagctaaattagtccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 27750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 28636362 - 28636398
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaatacta 234  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28636362 gaggaagagtacactcccagatcccaagtcaatacta 28636398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 28644096 - 28644132
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaatacta 234  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28644096 gaggaagagtacactcccagatcccaagtcaatacta 28644132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 28653048 - 28653084
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaatacta 234  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28653048 gaggaagagtacactcccagatcccaagtcaatacta 28653084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 28783174 - 28783078
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||||||||| | ||| |||||| ||||   || ||| |||||| |||||| ||||| |||||||||||||| || |||| |||||| ||||    
T  28783174 aagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacca 28783078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 36205307 - 36205230
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatc 220  Q
    ||||||||||||||||| | ||||||||||  | | || ||| |||||| |||||| ||||| |||||||||||||||||    
T  36205307 aagaagctaaattagtccatctaaattgac--cggggagaatcgaacatgagaccttgaggaggagcacactcccagatc 36205230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 12281608 - 12281517
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||||||||  | |||||||||| | |||| ||| |||  | |||||||||||| | |||||||| ||| ||||||| ||||||    
T  12281608 aagaagctaaattagtcagcttaaattgacatcggagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaatac 12281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 7347951 - 7347905
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaac 187  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||    
T  7347951 aagaagctaaattagcccacctaaattgacacaagagagaattgaac 7347905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 29858014 - 29858108
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||||||||| | |||||||||| ||||   |  ||| |||| | |||||||||||| |||||||||||| | ||||||| |||||| |||||    
T  29858014 aagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccag 29858108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 31088787 - 31088697
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||| |||||||| ||||||||||||  | |||||| |||  ||| | ||||||||||||  | ||||||| ||| |||||||||||||    
T  31088787 aagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacctcgaggataatcacactcgcaggtcccaagtcaata 31088697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 7140822 - 7140726
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||| |||||||| | ||| ||||||| ||| |||| ||| |||  | ||| |||||||| |||||||| ||||||||||||| |||||| |||||    
T  7140822 aagaaggtaaattagcccacccaaattgatacc-gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaataccaccag 7140726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 40791857 - 40791926
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcaca 210  Q
    ||||||||||||||| | || ||||||||||| ||||| ||| |||| |||||| || |||| |||||||    
T  40791857 aagaagctaaattagcccacttaaattgacactagagaaaatcgaacctaagacttcaaggaggagcaca 40791926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 43968960 - 43969033
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    |||||| |||||||||| ||||||||| |||||||||| ||| |||  | |||||||  ||| |||||||||||    
T  43968960 aagaagataaattagtccacctaaattaacaccagagataatcgaatctgagacctcagggaggagcacactcc 43969033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 44780076 - 44780165
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||| | ||| |||||||||| ||||  |||  ||| | |||||| ||||| |||||||||||||  ||||||| ||||    
T  44780076 aagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 35583713 - 35583625
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaa 229  Q
    |||||||||||||| |  | | ||||||||||||||||  || || | | |||||||||||| ||||| |||||||  |||||||||||    
T  35583713 aagaagctaaattaattcatcaaaattgacaccagagagtatcgatcctgagacctcgaggaggagcaaactcccaagtcccaagtcaa 35583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 44595817 - 44595889
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaa-gagcacact 212  Q
    ||||||||||||||||| | |||||||||||| | ||| ||| |||| |||||| | |||||| |||||||||    
T  44595817 aagaagctaaattagtccatctaaattgacactaaagagaatcgaacctaagacgttgaggaaggagcacact 44595889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 15285 - 15385
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | |||||||||| || | |||| ||| |||| | |||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  15285 aagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 15384  T
Q  241 c 241  Q
    |    
T  15385 c 15385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 5934235 - 5934151
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||| ||||||||||| |||||||||||||||||||  ||| |||||| | ||||| |||| ||||||||||||||||||||||    
T  5934235 aagaaactaaattagtccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccagatcccaag 5934151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 7721483 - 7721400
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    |||||||||||||| || | | |||||||||||||||| ||| |||||| |||||| ||||| ||| |||||||||| ||||||    
T  7721483 aagaagctaaattattccatccaaattgacaccagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaa 7721400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 41519227 - 41519317
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | |||||||||||||| ||||| ||  |||| | |||||| ||||| ||||||||||| | |||||||||||||||    
T  41519227 aagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaatac 41519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 15137667 - 15137570
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||| ||||||||| | ||| |||||||||||||||| |||  ||| | |||||| ||||| ||||||||||| | ||||||||||| ||| |||||    
T  15137667 aagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccag 15137570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 30579449 - 30579352
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||||||||| ||||||||| ||| |||| | |||||| ||||| | | |||||||||| || |||| |||||| |||||    
T  30579449 aagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccag 30579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 2446422 - 2446322
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | |||||||| | |||| |||| ||| |||| | ||| |||||||| |||||||||||||  ||||||| |||||| | |||||    
T  2446422 aagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagac 2446323  T
Q  241 c 241  Q
    |    
T  2446322 c 2446322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 21558242 - 21558146
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||||||||  | |||||||||| ||||||||| ||| |||| | |||||| ||||| ||||||| ||  || | |||||||||||||||||    
T  21558242 aagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatactacca 21558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 42712069 - 42711997
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccca 216  Q
    |||||||||||| | |||||||||||||| || || ||| |||||| |||||| ||||| |||||||||||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactccca 42711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 48772052 - 48771956
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||||||||| | ||||||||||  ||  | || ||| |||| | ||||||| |||| |||||||||||||||||||||| |||||| ||||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccacca 48771956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 25590725 - 25590634
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||  |||||||||||  ||| ||| ||||   |||||||||||| ||||||||||||||||| |||| ||||||    
T  25590725 aagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaatac 25590634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 9183153 - 9183231
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagat 219  Q
    ||||| ||||||||| | ||| |||||||||||||||| ||| |||| | |||| | ||||| ||||||||||||||||    
T  9183153 aagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 22760927 - 22760877
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  22760927 agaccttgaggaggagcacactcccaggtcccaagtcaataccaccagacc 22760877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 26703239 - 26703149
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||| ||||||||| | |||||||||| ||  || || || ||||| | |||||||||| | |||||||||||||||||||||| |||||    
T  26703239 aagaatctaaattagcccacctaaattggcattagggataaatgaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 19553567 - 19553471
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||| | ||||||||||  ||| | || |||||||| |||||||| ||||| |||||||||||||| | ||||| |||||| |||||    
T  19553567 aagaagctaaagtagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccaccag 19553471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 26459394 - 26459463
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| ||| |||| | |||||| ||||| |||||||||||||| ||||||| ||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 26459463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 22035512 - 22035428
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||||| || |||||||||||  |||| ||| |||| |  | ||||||||| |||||||||| ||| |||||||    
T  22035512 aagaagctaaattagtccacttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaag 22035428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 45709670 - 45709754
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||||| |||| | ||||||||||  | | |||| ||| |||| | |||||||||||| |||||||||| |||||||||||    
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaag 45709754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 2883046 - 2882991
Alignment:
Q  159 acctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    |||||||||| ||||||||| |||||||| | |||||| ||||| |||||||||||    
T  2883046 acctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 21410674 - 21410753
Alignment:
Q  143 gaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatccc 222  Q
    ||||||||||||||||| | ||||||||| |||| | ||| |||  | |||| ||||||| |||||||||| ||||||||    
T  21410674 gaagctaaattagtctatccaaattgacatcagacataatcgaatttgagacttcgaggaggagcacactctcagatccc 21410753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 43663057 - 43663148
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||||| ||| ||||||| ||| |||| | | |||| | ||| |||||||| || ||| |||| || ||||||||||||||    
T  43663057 aagaagctaaattagtccacccaaattgataccggagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaatac 43663148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 279916 - 280005
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||| | ||| |||||| |||| |||| |||||||| | ||||||  |||| ||| ||||||||| |||||||| |||||    
T  279916 aagaagctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 7309469 - 7309396
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactccc 215  Q
    ||||||||||||||| | || |||||||||||  |||| ||| |||| | |||||||||||| ||||||||||||    
T  7309469 aagaagctaaattagcccacttaaattgacacg-gagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 23552212 - 23552142
Alignment:
Q  161 ctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||||| ||  ||||| ||| |||| | |||||| ||||| |||||||||||||| |||||||||||||    
T  23552212 ctaaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 29785285 - 29785347
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||| ||||||| | ||| |||||| |||||| ||||| ||||||||| ||||||||||||    
T  29785285 aaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaag 29785347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 33222462 - 33222384
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||||||||| ||| |||| | |||||| ||||| ||| ||||| |||| ||||||| |||||| || |||||    
T  33222462 aaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccactagacc 33222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 5273552 - 5273649
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||| | ||| |||||| |||| ||||||||  ||| |||||||| ||||| ||||||||||  || ||||||| ||| || |||||    
T  5273552 aagaagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccag 5273649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 25655212 - 25655281
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| ||| |||| | | |||| ||||| || ||||||| ||||||||||||||||||    
T  25655212 aaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaatac 25655281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 43591021 - 43590924
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||| ||||| ||| || || ||| |||| | |||| | ||||| |||||||||||||  ||||||| |||||| |||||    
T  43591021 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccag 43590924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 23595791 - 23595743
Alignment:
Q  193 acctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||    
T  23595791 accttgaggaggagcacactccgagatctcaagtcaataccaccagacc 23595743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 35513580 - 35513508
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactc 213  Q
    ||||||||||||||||| |||||||||  || | |||| ||| |||||| |||  ||||||| ||||||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactc 35513508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 37085563 - 37085607
Alignment:
Q  193 acctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||    
T  37085563 acctcgaggatgagcacactcccaaatcccaagccaataccacca 37085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 46572172 - 46572220
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacat 189  Q
    ||||||||||||||||| | | |||||||||||||||| ||| ||||||    
T  46572172 aagaagctaaattagtccaaccaaattgacaccagagagaatcgaacat 46572220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 12587383 - 12587294
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||| | |||||||||| |||| |||| ||| |||| | |||||||||||| |||||||||| |||||||||||||||||    
T  12587383 aagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 17745219 - 17745309
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||  | |||||||||||||||||||| ||| |||||| |||||||||||| |||||||| | ||| ||||||| ||||||    
T  17745219 aagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaatac 17745309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 15786304 - 15786382
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||||| ||| ||| |||| | |||||| ||||| |||||||||||||||||||||| ||||||||| |||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagacc 15786382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 40257513 - 40257416
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||| | ||| ||||||||||| || | |||||||| | |||||||||||| |||||||||||||| || |||| |||||| |||||    
T  40257513 aagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccag 40257416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 44126509 - 44126412
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| |||||||||||| ||| ||||| |||  ||  | |||||||| ||| |||||||||||||| ||||| |||||||| |||||    
T  44126509 aagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccag 44126412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 42983336 - 42983432
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||||||||||| || ||||||| |||| |||| ||| |||| |  |||||| |||| || |||||||||||||| ||||||||||| ||||    
T  42983336 aagaagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccacca 42983432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 6650709 - 6650618
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||| || || |||||||||||||||||||| ||| |||| | |||| | ||||| ||||| |||||| ||||||||| ||||||    
T  6650709 aagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaatac 6650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 17440026 - 17439944
Alignment:
Q  147 ctaaattagtcta-cctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtca 228  Q
    ||||||||||| | |||||||||||||  |||| |||  ||||| |||||||||||| |||||||||||||||||| ||||||    
T  17440026 ctaaattagtccaacctaaattgacactggagagaatcaaacatgagacctcgaggaggagcacactcccagatcctaagtca 17439944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 8904506 - 8904434
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactac 235  Q
    |||||| ||||||||| ||| |||| | |||||| ||||| |||||||||| || ||||||||||||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactac 8904434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 25297886 - 25297786
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||  | |||||||||||| || | || |||  ||| | |||||||||||| |||||||||| ||||||| |||||||||| || ||||    
T  25297886 aagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagac 25297787  T
Q  241 c 241  Q
    |    
T  25297786 c 25297786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 51814605 - 51814517
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| | ||| |||||| |||| |||| ||| |||| | |||||| ||||| |||||||||| |||||| |||||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaatac 51814517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 9643771 - 9643862
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| |||||||  ||||  ||||||||||| |||| |||||||  | |||||| ||||| || ||||||||||||||||||| ||||||    
T  9643771 aagaagttaaattaacctacaaaaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaatac 9643862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 16893508 - 16893417
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||  ||||||||||| |||| ||| |||| | |||||||||||| ||| ||||||||| ||| |||| ||||||    
T  16893508 aagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaatac 16893417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 31794226 - 31794317
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||| |||||||||||||||  ||| ||||   |||||| ||||| |||||||||||||  ||||||| ||||||    
T  31794226 aagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaatac 31794317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 6948059 - 6948117
Alignment:
Q  161 ctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagat 219  Q
    ||||||||||||| | || |||||||||| ||||||||||||  |||||||||||||||    
T  6948059 ctaaattgacaccggtgagaattgaacatgagacctcgaggagcagcacactcccagat 6948117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 33700756 - 33700826
Alignment:
Q  162 taaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||| ||||||||| ||| |||| | |||||| ||||| |||||||||||||||| ||||| ||||||    
T  33700756 taaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaatac 33700826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 42412664 - 42412726
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||||| ||  | |||||||||||||| || ||||||||||||||||||||||| ||||    
T  42412664 aaattgacactaggaagaattgaacataagatcttgaggaagagcacactcccagatctcaag 42412726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 2069769 - 2069673
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||||||||||||   | | |||||||||||||||  | ||||| || |||| ||||||| ||||||| | ||||||||||||||||||| |||||    
T  2069769 aagaagctaaattagctcatccaaattgacaccagagggatttgaatatgagacttcgaggaggagcaca-tgccagatcccaagtcaatacaaccag 2069673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 8177166 - 8177235
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| ||| |||| | | |||| ||||| |||||||||||||||||||||| ||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 8177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 9165179 - 9165248
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| |||||||| | |||| | ||||| |||||||||||||| ||||||| ||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaatac 9165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 9964495 - 9964462
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||||||||||||||||||||||    
T  9964495 gaggaagagcacactcccagatcccaagtcaata 9964462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 52116743 - 52116840
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||| ||||| ||| || || |||||||| | |||| | ||||| |||||||||||||  ||||||| |||||| |||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccag 52116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 52336758 - 52336827
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||||||| ||| |||| | ||| ||  |||| |||||||||||||||||||||| ||||||    
T  52336758 aaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatac 52336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 6122908 - 6122824
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | |||||| ||||| |||||||||||||  |||||||    
T  6122908 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaag 6122824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 9879552 - 9879456
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||| |||||||| | ||| |||||||||  ||||| ||| |||  | ||||||| |||||||| |||||| ||||||||||| |||||| ||||    
T  9879552 aagaagttaaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaatacaacca 9879456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 12370277 - 12370193
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||| |||||||||| ||   |||||||| ||| |||| |||  ||||| |||||||||||| |||||||||||||| |||||||    
T  12370277 aagaggctaaattagcctgtttaaattgataccggagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaag 12370193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 15065079 - 15065007
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactc 213  Q
    ||||||||||||||| | ||| ||||||||||| | || |||||||| | |||||| ||||| ||||||||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactc 15065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 28283645 - 28283573
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactc 213  Q
    |||||| |||||||| |||| ||||||||||||||||| ||| |||| | |||| || ||||||| |||||||    
T  28283645 aagaagttaaattagactacataaattgacaccagagagaatcgaacctgagacatcaaggaagaacacactc 28283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 28411423 - 28411347
Alignment:
Q  162 taaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||| ||||||||| |||||||  | ||||||| | || |||||||||| || ||||||||||||||| |||||    
T  28411423 taaattggcaccagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccag 28411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 1094639 - 1094548
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| |||||||| | |||||||||| |||| |||| ||| |||  | |||||||| ||| |||||||||| ||| | ||||||||||||    
T  1094639 aagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaatac 1094548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 7219880 - 7219971
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||||| ||||||||||  | || ||| ||| |||| | |||| ||||||| |||||||||| ||  ||||| ||||||||    
T  7219880 aagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactctcatgtcccaggtcaatac 7219971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 10526937 - 10526846
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||  | ||| |||||||| ||||||| ||| |||  | |||||| ||||| ||||| |||||||| ||||||| ||||||    
T  10526937 aagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaatac 10526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 27476733 - 27476824
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | |||||||| | ||||||||| |||  ||| | ||| |||||||| ||||||||||| |  ||||||| ||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatac 27476824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 2799954 - 2799892
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||| ||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||||    
T  2799954 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaag 2799892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 2074115 - 2074019
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    |||||||||||||||   | | |||||||||||||||  | ||||| || |||| ||||||| ||||||||  | ||||||||||||||||| |||||    
T  2074115 aagaagctaaattagctcatccaaattgacaccagagggatttgaatatgagacttcgaggaggagcacac-gctagatcccaagtcaatacaaccag 2074019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 11687626 - 11687675
Alignment:
Q  181 attgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||| |||||||||  | ||||||||| |||||||||||||||||    
T  11687626 attgaacatgagacctcgaaaaggagcacacttccagatcccaagtcaat 11687675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 12662389 - 12662296
Alignment:
Q  148 taaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||| |||||||||| ||  ||||| ||| |||| | |||| ||||||| ||||||||| ||  ||| ||||||||||| | ||||||    
T  12662389 taaattagtccacctaaattggcattagagataatcgaacctgagacatcgaggaggagcacacttccgtatcacaagtcaataccatcagacc 12662296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 27223142 - 27223183
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| || ||||||||||||||||||||| ||||||||||    
T  27223142 agaccttgaagaagagcacactcccagatcctaagtcaatac 27223183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 42949254 - 42949327
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    ||||||||||||||| | || ||||||| |||| |||| |||  || || |||||||||||| |||||||||||    
T  42949254 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 42949327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 50901695 - 50901607
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||| | |||||||||| |||  |||| ||| |||  | |||||||||||| ||||||||| |||| ||||||| ||||    
T  50901695 aagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 10150831 - 10150927
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||||||||||| ||  ||| ||||||| |||| |||||||| | |||| | ||||| ||| |||||||||  |||||| | ||||| ||||    
T  10150831 aagaagctaaattagtccactcaaactgacacctgagagaattgaacctgagactttgaggaggagtacactcccaagtcccaaataaataccacca 10150927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 44961879 - 44961807
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactc 213  Q
    ||||||||||||||| | ||| |||||||||| ||||| ||| |||| | |||||  ||||| ||||||||||    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 48619171 - 48619267
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||| |||||||||| ||  ||||||||||| |||| ||| |||| | ||| || |||||| | ||||||||||  || ||||||||||| ||||    
T  48619171 aagaagttaaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaataccacca 48619267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 41202357 - 41202264
Alignment:
Q  148 taaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    |||||||||| | | ||||||||| |||||| |||||||| |||||| ||||||| ||||| ||||||||||| || |||||||| ||||||||    
T  41202357 taaattagtccatccaaattgacatcagagaaaattgaacctaagacttcgaggaggagcatactcccagatctcaggtcaataccaccagacc 41202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 28846805 - 28846714
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| |||||||||||||| ||||||||| | | || ||| |||| | |||| ||||||| |||||||||||||| ||||||||||||||    
T  28846805 aagaagttaaattagtctacccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaatac 28846714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 33582087 - 33582004
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    ||||||||||||||||| |||||||||||||  ||||| ||| |||| | ||||||| |||| |||||||||| ||| ||||||    
T  33582087 aagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 33569820 - 33569891
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacact 212  Q
    ||||||| ||||||||| || ||||||  ||||||||| ||| |||| | ||||||||||||||||||||||    
T  33569820 aagaagcaaaattagtccacttaaattagcaccagagagaatcgaacctgagacctcgaggaagagcacact 33569891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 42602668 - 42602577
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||| |||||| |||| |||| |||  ||| |||||||| ||| | |||||||||||||| ||||||| ||||||    
T  42602668 aagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaatac 42602577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 30907590 - 30907676
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtc 227  Q
    |||||| |||||||||| ||  |||||| ||  ||||| |||||||||| |||| ||||||| |||||||||||||  |||||||||    
T  30907590 aagaagttaaattagtcaacacaaattggcataagagaaaattgaacatgagacgtcgaggaggagcacactcccaagtcccaagtc 30907676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 39715056 - 39715010
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||||    
T  39715056 agacctcgaggaggagcacactcccaggtcccaagtcaataccacca 39715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 1435177 - 1435094
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||||||||| ||| |||| | |||||| |||||  |||||||||| | ||||||||    
T  1435177 aagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaag 1435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 19016145 - 19016045
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| |||| ||||||| |||| | || |||  ||| | |||||||||||| |||||||||||||  || |||| |||||| | |||||    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagac 19016046  T
Q  241 c 241  Q
    |    
T  19016045 c 19016045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 21213883 - 21213783
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||| ||| ||| | |||||||||| |||| | || ||| |||| | ||||||| |||| || ||||||||||| ||||||| |||||| |||||||    
T  21213883 aagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagac 21213784  T
Q  241 c 241  Q
    |    
T  21213783 c 21213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 3001493 - 3001402
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||| ||||||||| | || |||| || ||||||||| ||| |||| | ||| ||| |||| ||||||||||| ||||| |||||||||||    
T  3001493 aagaacctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaatac 3001402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 25637265 - 25637182
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    |||||| |||||||| | |||||||||| || | |||| ||  |||| | |||||||||| | |||||||||||||||||||||    
T  25637265 aagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 42327357 - 42327448
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||| |||||||||| | ||| |||||| ||||  ||| ||| |||| | |||||| ||||| |||||||||||||| ||||||| ||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 42327448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 16918569 - 16918623
Alignment:
Q  170 caccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    ||||||||| |||  ||| |||||||| ||||| |||||||||||||||||||||    
T  16918569 caccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaa 16918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 19244222 - 19244132
Alignment:
Q  142 agaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||| ||||||||| | ||  |||||| ||||||||| ||| |||| | |||||| | ||| |||||||||| ||| ||||||||||||||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatac 19244132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 11251183 - 11251110
Alignment:
Q  159 acctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||||||||||| |||  ||| | |||||| ||||| ||||||||| |||  ||||||| ||||||    
T  11251183 acctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatac 11251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 12086091 - 12086188
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||||||||  |||| |||  ||| ||||   |||||| ||||| ||||||||| |||| ||||||| |||||| |||||    
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccag 12086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 29197345 - 29197434
Alignment:
Q  148 taaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||| | |||||||||| |||| |  | ||| |||||| |||| || |||| |||||||||||||  |||||||||||||| ||||    
T  29197345 taaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccacca 29197434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 30410533 - 30410602
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| ||||||||| ||| |||||| || ||| ||||| ||||||||||| || ||||||| ||||||    
T  30410533 aaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaatac 30410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 35203345 - 35203433
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaat 230  Q
    ||||||||||||||  | || ||||||||||||| ||| ||| |||||| |||| | ||||| |||||||||| || ||||||| |||||    
T  35203345 aagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagcacactctca-atcccaaatcaat 35203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 37480189 - 37480092
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | ||| ||||||  ||| | || ||| |||| | |||||| ||||| |||||||||| ||| ||||||| |||||| |||||    
T  37480189 aagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccag 37480092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 31573603 - 31573703
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||| |||||||||| ||||||||||||| |  ||| ||| |||| | |||| || |||| |||||||||| |||||| |||  |||||  |||||||    
T  31573603 aagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagacatcaaggaggagcacactctcagatctcaaaccaatatcaccagac 31573702  T
Q  241 c 241  Q
    |    
T  31573703 c 31573703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 42860412 - 42860372
Alignment:
Q  191 agacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||||||||| |||||||||||||| || ||||||||||    
T  42860412 agacctcgaggaggagcacactcccaggtctcaagtcaata 42860372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 33549218 - 33549118
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    |||||||||||||||   |||||||||| || | |||| ||| |||| | |||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  241 c 241  Q
    |    
T  33549118 c 33549118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 12633123 - 12633033
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    ||||||||||||||||| || ||||||||||   |||| ||| |||||| ||| ||||| || ||||||||||||| ||||||||||||||    
T  12633123 aagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaata 12633033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 30127512 - 30127414
Alignment:
Q  143 gaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagacc 241  Q
    ||||||||||||  |||||||||||| |||| || | ||| |||| | ||||||||| || ||||||||||||||| |||||| |||||| ||||||||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagacc 30127414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 6758384 - 6758481
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||| | | |||||||||||||||||||| ||| || | | |||||||||||  ||||||||||||| |||| ||| |||||| |||||    
T  6758384 aagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccag 6758481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 1992209 - 1992289
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcc 221  Q
    |||||||||||||||   |||||||||||||| ||||| ||| ||||||||||  |||| ||||| |||||||||||||||    
T  1992209 aagaagctaaattagcacacctaaattgacactagagagaatcgaacataagatttcgaagaagaacacactcccagatcc 1992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 9433606 - 9433643
Alignment:
Q  195 ctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9433606 ctcgaggaagagcacactcccagatcccaagtcaatac 9433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 12234469 - 12234566
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||  | | ||||||||||||  |||| ||| |||| | ||||||||||   |||||||||||||| |||||||||||||| |||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccag 12234566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 9626146 - 9626066
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcc 221  Q
    ||||||| ||| ||| |||||||| |||||||| |||| ||| |||||| |||||||||||| ||||| ||||| ||||||    
T  9626146 aagaagccaaactagcctacctaagttgacaccggagagaatcgaacatgagacctcgaggaggagcatactcctagatcc 9626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 11423680 - 11423580
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||| ||||||||||| |   ||||||||||  |||| ||| |||| | ||||||||||||  |||| ||||||| ||||||||||||||| |||||||    
T  11423680 aagaaactaaattagtccatacaaattgacactggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagac 11423581  T
Q  241 c 241  Q
    |    
T  11423580 c 11423580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 24641204 - 24641248
Alignment:
Q  193 acctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaataccacca 24641248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 31622953 - 31623053
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | ||| ||||||||||| |||  | |  ||| | |||||||||||| |||||||||||||| ||||||| |||||| ||| |||    
T  31622953 aagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggac 31623052  T
Q  241 c 241  Q
    |    
T  31623053 c 31623053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 346644 - 346554
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||| |||||||| |||| |||||||||||  | || ||| |||||| ||||||||||||  |||||||| |||| ||||||||||||||    
T  346644 aagaagataaattagcctacttaaattgacacgggtgagaatcgaacatgagacctcgaggagaagcacact-ccaggtcccaagtcaatac 346554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 3715566 - 3715475
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| || | ||||||||||||||  |||| ||| |||| | ||||||||| ||  |||| ||||||||||| |||||||||||    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaatac 3715475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 32613102 - 32613199
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||| ||||| |  |||||||||||   ||| ||| |||||| ||| || ||| | ||||||||||||||| ||||||||||||| |||||    
T  32613102 aagaagctaaactagtccatttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccag 32613199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 20213155 - 20213071
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | |||| | ||||| |||||||||||||| |||||||    
T  20213155 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaag 20213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 22107178 - 22107094
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||| | ||| |||||||||| ||||  ||| |||| | |||| | ||||| |||||||||||||| |||||||    
T  22107178 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaag 22107094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 6385976 - 6385885
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||||||||||| | ||| |||||  |||| |||| ||| |||| | ||||||  |||| ||||||| |||||| ||||||||||||||    
T  6385976 aagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatac 6385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 6776591 - 6776666
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||| |||||||| |||  ||| | |||| ||||||| |||||||| ||||||||||||| |||||| |||||    
T  6776591 aaattgaaaccagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccag 6776666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 16405198 - 16405116
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    ||||||||||||||||| ||||||||||||||  | || ||| |||  | ||||||||||||  ||||||||||||| ||||||    
T  16405198 aagaagctaaattagtc-acctaaattgacacaggtgagaatcgaaactgagacctcgaggagaagcacactcccaggtcccaa 16405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 21943429 - 21943480
Alignment:
Q  180 aattgaacataagacctcgaggaagagcacactcccagatcccaagtcaata 231  Q
    |||||||| | ||||||||||||||| ||||||| ||| |||||||||||||    
T  21943429 aattgaaccttagacctcgaggaagaacacactctcaggtcccaagtcaata 21943480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 15951294 - 15951348
Alignment:
Q  171 accagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||||| ||| ||||    
T  15951294 accagagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaag 15951348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 21418584 - 21418487
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||| | |||| ||||| ||| || || ||| |||| | |||| | ||||| |||||||||||||  ||||||| |||||| |||||    
T  21418584 aagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccag 21418487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 24256784 - 24256857
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    ||||||||||| ||  |||||||||||||||||||||| ||| |||| | |||||| ||| | ||||| |||||    
T  24256784 aagaagctaaactaacctacctaaattgacaccagagagaatcgaacttgagaccttgagaatgagcatactcc 24256857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 28364029 - 28363968
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    |||||||||||||||| ||| |||  | |||||| ||||| |||||||||| ||||||||||    
T  28364029 aaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaa 28363968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 14558075 - 14557976
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccagac 240  Q
    ||||||||||||||| | ||| ||||||||||| | || ||| |||| | |||||  ||||| ||||||||| |||| ||||||| ||| || |||||||    
T  14558075 aagaagctaaattagaccacccaaattgacacc-gggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagac 14557977  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 28841527 - 28841455
Alignment:
Q  142 agaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    |||| ||||||||| | | ||||||||||||| |||| ||| |||| | |||||| ||||| |||||||||||    
T  28841527 agaaactaaattagccaatctaaattgacaccggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

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Target: scaffold0299 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 11620 - 11545
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||| |||||||||| ||| |||| | |||||||||||| |||||||||||||||||||||| |||||| |||||    
T  11620 aaattaacaccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccag 11545  T

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Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 112396 - 112299
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||||||||| |||||||||| |||| |||| ||| |||| | ||||||| | || || ||||||||||||| ||||| |||||| |||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccag 112299  T

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Target: scaffold0118 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 41595 - 41686
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||| |||||||||| | ||| ||||||||| |||||| |||||||| | |||||||||||| ||||| |||| |||||| |||| ||||||    
T  41595 aagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaatac 41686  T

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Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 45739 - 45814
Alignment:
Q  159 acctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatacta 234  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||| || |||||||| || ||||||| ||||||||    
T  45739 acctaaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaatacta 45814  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 93061 - 92970
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||| ||||||||||| ||||||||||  ||| || | ||| |||| | ||||||| |||| || ||||||||||||| ||||||||||||    
T  93061 aagaatctaaattagtccacctaaattggtacctgaaagaatcgaacctcagacctcaaggaggatcacactcccagattccaagtcaatac 92970  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 94954 - 95024
Alignment:
Q  162 taaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    ||||||| ||||||||| |||||||| | |||||| ||||| |||||||||||||| | ||||| ||||||    
T  94954 taaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaatac 95024  T

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Target: scaffold0300 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 4454 - 4370
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||||||||| ||| |||||||||| ||||  ||| |||| ||| ||||  || | ||||||||||||| ||||||||    
T  4454 aagaagctaaattagtccacccaaattgacactagagggaatcgaacctaaaaccttaagaaggagcacactcccaaatcccaag 4370  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 12303 - 12219
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaag 225  Q
    ||||||||||| || || ||||||||||| |||||||| |||| ||| | |||||| ||||| ||||| ||||| || |||||||    
T  12303 aagaagctaaactaatccacctaaattgataccagagagaatttaactttagaccttgaggaggagcaaactccaaggtcccaag 12219  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 805 - 899
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactaccag 238  Q
    ||||||||||  || ||| ||||| | || ||||| ||| |||| | |||| ||||||| ||||||| |||||||||||||| |||||| |||||    
T  805 aagctaaatttatccacccaaattaatactagagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccag 899  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 13030 - 13104
Alignment:
Q  163 aaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatactacca 237  Q
    ||||||||| | |||| ||| |||| | |||||| ||||| ||||||||||||||||| |||| |||||| ||||    
T  13030 aaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccacca 13104  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 14927 - 15000
Alignment:
Q  141 aagaagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcc 214  Q
    ||||||||||||||| | || ||||||| |||| |||| |||  || || |||||||||||| |||||||||||    
T  14927 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 15000  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 139974 - 139897
Alignment:
Q  147 ctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaa 224  Q
    ||||||||| | | |||||||||||| ||||| |||| ||| |||||| | ||| ||||||||| |||||| ||||||    
T  139974 ctaaattagcccatctaaattgacactagagagaattaaacctaagactttgagaaagagcacattcccaggtcccaa 139897  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 156954 - 157040
Alignment:
Q  144 aagctaaattagtctacctaaattgacaccagagacaattgaacataagacctcgaggaagagcacactcccagatcccaagtcaatac 232  Q
    |||||||||||| | ||  |||||||||||  ||| ||| |||| |  ||||||||||| ||||||||||||||||| |||| ||||||    
T  156954 aagctaaattagcccactcaaattgacaccgaagaaaatcgaacct--gacctcgaggaggagcacactcccagatctcaagccaatac 157040  T

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Target: scaffold0591 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 5682 - 5646
Alignment:
Q  198 gaggaagagcacactcccagatcccaagtcaatacta 234  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  5682 gaggaagagtacactctcagatcccaagtcaatacta 5646  T

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