View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7861_high_22 (Length: 254)
Name: NF7861_high_22
Description: NF7861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7861_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 17867383 - 17867162
Alignment:
| Q |
15 |
gacatcacttgtgagatctgtcatcaggtatgctgttttgtatgataactttaattttcctaatcagttatctttttgtcggtgatggaaaataatgtga |
114 |
Q |
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| T |
17867383 |
gacatcacttgtgagatctgtcatcaggtatgctgttttgtatgataactttaattttcctaatcagttatctttttgtcggtgatggaaaataatgtga |
17867284 |
T |
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| Q |
115 |
atacttannnnnnnaaaagtggctagttttattagagtctatctcttgtttaataccctcttttcttcgcatcgtatgcatacgtgcaggcatctaattg |
214 |
Q |
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| T |
17867283 |
atgcttatttttt-aaaagtggctagttttattagagtctatctcttgtttaataccctctttccttcgcatcgtatgcatacgtgcaggcatctaattg |
17867185 |
T |
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| Q |
215 |
tttttggcctgccgcccactgat |
237 |
Q |
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||||||||||||||||||||||| |
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| T |
17867184 |
tttttggcctgccgcccactgat |
17867162 |
T |
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