View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7861_low_3 (Length: 662)

Name: NF7861_low_3
Description: NF7861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7861_low_3
NF7861_low_3
[»] chr4 (5 HSPs)
chr4 (18-638)||(2878566-2879186)
chr4 (384-638)||(2888068-2888322)
chr4 (383-637)||(2896044-2896298)
chr4 (68-241)||(2895769-2895942)
chr4 (78-245)||(2888427-2888594)
[»] chr2 (7 HSPs)
chr2 (387-625)||(44209788-44210026)
chr2 (402-584)||(44221998-44222180)
chr2 (402-584)||(44232824-44233006)
chr2 (82-154)||(44232518-44232590)
chr2 (82-223)||(44209486-44209627)
chr2 (82-223)||(44221700-44221841)
chr2 (84-157)||(43455629-43455702)
[»] chr8 (1 HSPs)
chr8 (113-177)||(4502991-4503055)
[»] chr7 (7 HSPs)
chr7 (111-159)||(39536651-39536699)
chr7 (111-169)||(39545968-39546026)
chr7 (111-160)||(1083275-1083324)
chr7 (111-160)||(39340177-39340226)
chr7 (110-158)||(39354999-39355047)
chr7 (111-178)||(39562774-39562841)
chr7 (480-526)||(39563086-39563132)
[»] chr1 (2 HSPs)
chr1 (83-235)||(2147362-2147514)
chr1 (82-181)||(2159232-2159331)
[»] chr3 (1 HSPs)
chr3 (83-229)||(49774608-49774754)


Alignment Details
Target: chr4 (Bit Score: 613; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 18 - 638
Target Start/End: Complemental strand, 2879186 - 2878566
Alignment:
Q  18 acatcagtatgtaaataaagcatagtgcaaatacatttatcttgtgtgtgaaatagtgattttattacctgtgcaagtgcatagggtaaggcagaataca 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2879186 acatgagtatgtaaataaagcatagtgcaaatacatttatcttgtgtgtgaaatagtgattttattacctgtgcaagtgcatagggtaaggcagaataca 2879087  T
Q  118 ttccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggctgaattttggaccccaatgaagaaaacagcagtgta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2879086 ttccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggctgaattttggaccccaatgaagaaaacagcagtgta 2878987  T
Q  218 cattgagcccatggcattagacaggtctagtcctcttgtgctggaatccacgaaaggcatcacaattcaagtggaaatgaaatatcaactaaacggtgtt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878986 cattgagcccatggcattagacaggtctagtcctcttgtgctggaatccacgaaaggcatcacaattcaagtggaaatgaaatatcaactaaacggtgtt 2878887  T
Q  318 tggataaatattttgattaagtgcaaattcaataagctattgtcatatttatagattttggaagttttcacttactatttgcgtccgaggtcccaaaaca 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878886 tggataaatattttgattaagtgcaaattcaataagctattgtcatatttatagattttggaagttttcacttactatttgcgtccgaggtcccaaaaca 2878787  T
Q  418 ttgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgcgccaatatgaccaacgttgtttccacaagcaagc 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878786 ttgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgcgccaatatgaccaacgttgtttccacaagcaagc 2878687  T
Q  518 caagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagcaagttttcccaattcttctataagttgcttattt 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2878686 caagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagcaggttttcccaattcttctataagttgcttattt 2878587  T
Q  618 ctcctgaacaatagtgtataa 638  Q
    |||||||||||||||||||||    
T  2878586 ctcctgaacaatagtgtataa 2878566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 384 - 638
Target Start/End: Complemental strand, 2888322 - 2888068
Alignment:
Q  384 ttcacttactatttgcgtccgaggtcccaaaacattgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgc 483  Q
    |||||||||||||| | ||| || |||||||| |||||||||||||||||  ||||||||  ||  ||| ||||||| |||| |||||||  ||||||||    
T  2888322 ttcacttactatttccttccaagatcccaaaatattgttccaaacatcaagcctatgaaaacagtgaagaaaaacctcacagaagtgtatggcgggttgc 2888223  T
Q  484 gccaatatgaccaacgttgtttccacaagcaagccaagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagc 583  Q
    |||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||  || |||||||||||| || |||||| | ||    
T  2888222 gccaatatgaccaatgttgtttccataagcaagccaaacattggactaaaaatgattgtgagtattgggcagagaaataaagatcatttgaaccaggtgc 2888123  T
Q  584 aagttttcccaattcttctataagttgcttatttctcctgaacaatagtgtataa 638  Q
    | |||| || |||||||||||||||||||| |||||||||||||||||| |||||    
T  2888122 aggtttgcctaattcttctataagttgcttgtttctcctgaacaatagtttataa 2888068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 383 - 637
Target Start/End: Original strand, 2896044 - 2896298
Alignment:
Q  383 tttcacttactatttgcgtccgaggtcccaaaacattgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttg 482  Q
    ||||||||||||||| | ||| |||| ||| ||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||  ||| |||    
T  2896044 tttcacttactatttccttccaaggttccagaacattgttccaaacatcaatgctatgaaagtagtgaagaaaaacctcacagcagtgtatggcggattg 2896143  T
Q  483 cgccaatatgaccaacgttgtttccacaagcaagccaagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagag 582  Q
    ||||| ||||||||| |||||||||| | ||||||||||||||| |   ||||||||||||||||||||   | ||||| ||||||||| |||||| |||    
T  2896144 cgccagtatgaccaatgttgtttccataggcaagccaagcattggatccaaaatgattgtgagtattgggcggagaaatgaagatccttagaaccaggag 2896243  T
Q  583 caagttttcccaattcttctataagttgcttatttctcctgaacaatagtgtata 637  Q
    || |||| || |||||| ||||||||||||| |||||||| || |||||| ||||    
T  2896244 caggtttgcctaattctactataagttgcttgtttctcctaaagaatagtttata 2896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 2895769 - 2895942
Alignment:
Q  68 aaatagtgattttattacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactact 167  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||     
T  2895769 aaatggtgattttattacctgtgcaaatgcatagggtaaggcagaatacattccagcagctctttctctatagaagacagatctttcaacagctaccacg 2895868  T
Q  168 ggttgtactgaggctgaattttggaccccaatgaagaaaacagcagtgtacattgagcccatggcattagacag 241  Q
    |||||||| || | |||||| |||||||||| ||||| ||||||||| ||||| || || | ||||||| ||||    
T  2895869 ggttgtacagacgatgaattctggaccccaaggaagagaacagcagtatacatcgaaccgagggcattaaacag 2895942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 2888594 - 2888427
Alignment:
Q  78 tttattacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactg 177  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| || |||| ||||||||| ||||| ||||||||||| |    
T  2888594 tttattacctgtgcaaatgcataaggtaaggcagaatacatcccagcagctctttctctatagaacacagatctttcaactgctaccactggttgtacag 2888495  T
Q  178 aggctgaattttggaccccaatgaagaaaacagcagtgtacattgagcccatggcattagacaggtct 245  Q
      | |||||| |||||||||| ||||| ||||||||| ||||| || || | ||||||| ||||||||    
T  2888494 ctgatgaattctggaccccaaggaagagaacagcagtatacatcgaaccgagggcattaaacaggtct 2888427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-32; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 387 - 625
Target Start/End: Original strand, 44209788 - 44210026
Alignment:
Q  387 acttactatttgcgtccgaggtcccaaaacattgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgcgcc 486  Q
    ||||||| |||||  ||||||||||| |||||||||||||||||||| |||||||| || |  ||| ||||||| ||||||||||||   || || ||||    
T  44209788 acttactgtttgccaccgaggtcccagaacattgttccaaacatcaaggctatgaatgtcgtgaagaaaaacctcacagcagtgtatggtggattacgcc 44209887  T
Q  487 aatatgaccaacgttgtttccacaagcaagccaagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagcaag 586  Q
    |||||||||||||||||||||| ||||| |||  |||||| || || || || || ||| ||||  ||||||||| ||||||||| |||||| ||||| |    
T  44209888 aatatgaccaacgttgtttccataagcaggcctggcattggaccaagaaagactgcgagaattgagtagggaaatgaagatcctttgaaccaggagcagg 44209987  T
Q  587 ttttcccaattcttctataagttgcttatttctcctgaa 625  Q
        || | |||||  ||||||||||| |||||||||||    
T  44209988 cacgccaagttcttgaataagttgcttgtttctcctgaa 44210026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 402 - 584
Target Start/End: Original strand, 44221998 - 44222180
Alignment:
Q  402 ccgaggtcccaaaacattgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgcgccaatatgaccaacgtt 501  Q
    ||||||||||| ||||||||||||||||||||  ||||||| ||||  ||| ||||||| ||||||||||||   || || |||||||||||||||||||    
T  44221998 ccgaggtcccagaacattgttccaaacatcaagcctatgaaggtagtgaagaaaaacctcacagcagtgtatggtggattacgccaatatgaccaacgtt 44222097  T
Q  502 gtttccacaagcaagccaagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagca 584  Q
    ||||||| ||||| |||  ||||||||| || || || || ||| ||||  ||||||||| ||||||||| |||||| |||||    
T  44222098 gtttccataagcaggcctggcattgaaccaagaaagactgcgagaattgagtagggaaatgaagatcctttgaaccaggagca 44222180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 584
Target Start/End: Original strand, 44232824 - 44233006
Alignment:
Q  402 ccgaggtcccaaaacattgttccaaacatcaatgctatgaaagtagcaaagtaaaacctaacagcagtgtataacgggttgcgccaatatgaccaacgtt 501  Q
    ||||||||||| ||||||||||||||||||||  ||||||| ||||  ||| ||||||| ||||||||||||   || || |||||||||||||||||||    
T  44232824 ccgaggtcccagaacattgttccaaacatcaagcctatgaatgtagtgaagaaaaacctcacagcagtgtatggtggattacgccaatatgaccaacgtt 44232923  T
Q  502 gtttccacaagcaagccaagcattgaactaaaaatgattgtgagtattggctagggaaataaagatccttggaaccaagagca 584  Q
    ||||||| ||||| |||  |||||| || || || || || ||| ||||  ||||||||| ||||||||| |||||| |||||    
T  44232924 gtttccataagcaggcctggcattggaccaagaaagactgcgagaattgagtagggaaatgaagatcctttgaaccaggagca 44233006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 44232518 - 44232590
Alignment:
Q  82 ttacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttc 154  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  44232518 ttacctgtgaaaatgcatagggtaaggcagagtacattccagcagctttttctctataaaatacagttctttc 44232590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 44209486 - 44209627
Alignment:
Q  82 ttacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggc 181  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| || || || || || || || || |     
T  44209486 ttacctgtgaaaatgcatagggtaaggcagagtacattccagcagctttttctctattaaatacagttctttccactgcaaccaccggctgcacagaaga 44209585  T
Q  182 tgaattttggaccccaatgaagaaaacagcagtgtacattga 223  Q
     |||||||| || |||| ||||| |||||| || ||||||||    
T  44209586 agaattttgcactccaaggaagagaacagcggtatacattga 44209627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 44221700 - 44221841
Alignment:
Q  82 ttacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggc 181  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||  |||||| |||||| ||||| |||||||| || || || || || || || |     
T  44221700 ttacctgtgaaaatgcatatggtaaggcagaatacattccagcagccttttctcgataaaatacagtcctttcaactgcaaccaccggctgcacagaaga 44221799  T
Q  182 tgaattttggaccccaatgaagaaaacagcagtgtacattga 223  Q
     |||||||| || |||| ||||| |||||| || ||||||||    
T  44221800 agaattttgtactccaaggaagagaacagcggtatacattga 44221841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 43455629 - 43455702
Alignment:
Q  84 acctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaac 157  Q
    ||||| ||||| || || ||||| |||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  43455629 acctgagcaagggcgtaaggtaaagcagaatacattccagcagctctttctcgatagaatacagttctttcaac 43455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 4503055 - 4502991
Alignment:
Q  113 atacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactg 177  Q
    ||||||||||||||||||||||||||| || || ||||||||||  ||||| |||||||| ||||    
T  4503055 atacattccagcagctctttctctatagaacactgttctttcaatggctacaactggttgaactg 4502991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 39536651 - 39536699
Alignment:
Q  111 gaatacattccagcagctctttctctataaaaaacagttctttcaacag 159  Q
    |||||||||||||| ||||||||||||||||| || |||||||||||||    
T  39536651 gaatacattccagccgctctttctctataaaagactgttctttcaacag 39536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 39545968 - 39546026
Alignment:
Q  111 gaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactgg 169  Q
    ||||||||||| || |||||||||| |||||| || ||||||||||||||||| |||||    
T  39545968 gaatacattccggctgctctttctcgataaaagaccgttctttcaacagctaccactgg 39546026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 1083275 - 1083324
Alignment:
Q  111 gaatacattccagcagctctttctctataaaaaacagttctttcaacagc 160  Q
    ||||||||||| || ||||||||||||||||| || ||||||||||||||    
T  1083275 gaatacattccggctgctctttctctataaaagacggttctttcaacagc 1083324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 39340226 - 39340177
Alignment:
Q  111 gaatacattccagcagctctttctctataaaaaacagttctttcaacagc 160  Q
    ||||||||||| || ||||||||||||||||| || ||||||||||||||    
T  39340226 gaatacattccggccgctctttctctataaaagaccgttctttcaacagc 39340177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 39355047 - 39354999
Alignment:
Q  110 agaatacattccagcagctctttctctataaaaaacagttctttcaaca 158  Q
    |||||||||||| || ||||||||||||||||| || ||||||||||||    
T  39355047 agaatacattccggctgctctttctctataaaagaccgttctttcaaca 39354999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 39562774 - 39562841
Alignment:
Q  111 gaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactga 178  Q
    ||||||||||| || ||||||||||||||||| || |||||||| ||||| || ||||| || |||||    
T  39562774 gaatacattccggctgctctttctctataaaagaccgttctttcgacagcaaccactggctgcactga 39562841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 526
Target Start/End: Original strand, 39563086 - 39563132
Alignment:
Q  480 ttgcgccaatatgaccaacgttgtttccacaagcaagccaagcattg 526  Q
    ||||||||||| |||||| |||||||||| |||||||||| ||||||    
T  39563086 ttgcgccaataagaccaatgttgtttccataagcaagccatgcattg 39563132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 2147362 - 2147514
Alignment:
Q  83 tacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggct 182  Q
    |||||||||||| ||||| || |  || ||||||||||| |||||||||||||| || || || ||||| ||||  ||||||| ||||||||| |||||     
T  2147362 tacctgtgcaagagcatatggcatagctgaatacattcctgcagctctttctctgtagaagactgttctctcaattgctactattggttgtaccgaggca 2147461  T
Q  183 gaattttggaccccaatgaagaaaacagcagtgtacattgagcccatggcatt 235  Q
      ||||   ||||| ||||||  ||||||||  |||||||| ||||| |||||    
T  2147462 ccatttacaacccctatgaaggtaacagcagcatacattgaccccattgcatt 2147514  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 2159232 - 2159331
Alignment:
Q  82 ttacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggc 181  Q
    ||||||||||   |||||| || || || |||||||||||||||||||||||||| || || || ||||| ||||| |||| ||| || || ||||||||    
T  2159232 ttacctgtgctgctgcataaggcaaagcggaatacattccagcagctctttctctgtagaagactgttctctcaactgctattacaggctgcactgaggc 2159331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 49774754 - 49774608
Alignment:
Q  83 tacctgtgcaagtgcatagggtaaggcagaatacattccagcagctctttctctataaaaaacagttctttcaacagctactactggttgtactgaggct 182  Q
    ||||||| ||| |||||| || || || || ||||||||||||||  |||||||||| ||||| ||||| ||||  ||||| |||||||| || || |      
T  49774754 tacctgtccaaatgcatatggcaatgctgagtacattccagcagccttttctctatagaaaactgttctctcaatggctacaactggttgcaccgatgta 49774655  T
Q  183 gaattttggaccccaatgaagaaaacagcagtgtacattgagcccat 229  Q
    | |||||| |||||||||||||  || |||| |||||| || |||||    
T  49774654 gcattttgtaccccaatgaagagcactgcagcgtacatggaccccat 49774608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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