View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7861_low_32 (Length: 332)

Name: NF7861_low_32
Description: NF7861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7861_low_32
NF7861_low_32
[»] chr6 (16 HSPs)
chr6 (20-322)||(22705085-22705387)
chr6 (262-323)||(24127829-24127890)
chr6 (282-321)||(15141911-15141950)
chr6 (284-322)||(14641470-14641508)
chr6 (262-323)||(8462019-8462080)
chr6 (260-321)||(13570475-13570536)
chr6 (284-321)||(13575035-13575072)
chr6 (284-321)||(13577574-13577611)
chr6 (284-321)||(20898996-20899033)
chr6 (284-321)||(24617740-24617777)
chr6 (284-323)||(14372191-14372230)
chr6 (284-321)||(8483639-8483676)
chr6 (284-321)||(13565947-13565984)
chr6 (260-305)||(30884410-30884455)
chr6 (262-310)||(9351142-9351190)
chr6 (262-318)||(14982402-14982458)
[»] chr2 (7 HSPs)
chr2 (68-227)||(18142794-18142953)
chr2 (262-321)||(13619101-13619160)
chr2 (239-305)||(15718809-15718875)
chr2 (171-231)||(15894898-15894958)
chr2 (262-323)||(17678294-17678355)
chr2 (262-323)||(20477437-20477498)
chr2 (279-320)||(32234434-32234475)
[»] chr3 (7 HSPs)
chr3 (120-231)||(32222545-32222656)
chr3 (263-322)||(1051323-1051382)
chr3 (262-321)||(25760032-25760091)
chr3 (284-321)||(26953958-26953995)
chr3 (284-323)||(51661714-51661753)
chr3 (284-321)||(10623242-10623279)
chr3 (284-321)||(18517712-18517749)
[»] chr8 (10 HSPs)
chr8 (47-195)||(33956470-33956618)
chr8 (262-322)||(16290868-16290928)
chr8 (284-322)||(24184757-24184795)
chr8 (262-321)||(26657679-26657738)
chr8 (284-322)||(18036822-18036860)
chr8 (239-305)||(18695510-18695576)
chr8 (284-329)||(1046598-1046643)
chr8 (262-323)||(10568305-10568366)
chr8 (263-319)||(26867471-26867527)
chr8 (263-323)||(29233375-29233435)
[»] chr7 (8 HSPs)
chr7 (50-142)||(2040237-2040329)
chr7 (239-322)||(2040084-2040167)
chr7 (266-321)||(12163411-12163466)
chr7 (262-323)||(1537963-1538024)
chr7 (284-323)||(3997165-3997204)
chr7 (262-309)||(32021979-32022026)
chr7 (284-321)||(28780215-28780252)
chr7 (279-323)||(15468260-15468304)
[»] scaffold0886 (1 HSPs)
scaffold0886 (262-322)||(2794-2854)
[»] scaffold0196 (1 HSPs)
scaffold0196 (284-323)||(798-837)
[»] scaffold0009 (1 HSPs)
scaffold0009 (262-321)||(1501-1560)
[»] chr5 (8 HSPs)
chr5 (262-321)||(2259404-2259463)
chr5 (284-322)||(4120553-4120591)
chr5 (262-323)||(5781085-5781146)
chr5 (284-321)||(15614771-15614808)
chr5 (284-321)||(21711545-21711582)
chr5 (176-230)||(3040727-3040781)
chr5 (262-323)||(28682762-28682823)
chr5 (287-323)||(24122975-24123011)
[»] scaffold0437 (2 HSPs)
scaffold0437 (284-322)||(11448-11486)
scaffold0437 (262-323)||(14335-14396)
[»] scaffold0068 (1 HSPs)
scaffold0068 (284-321)||(2328-2365)
[»] scaffold0012 (1 HSPs)
scaffold0012 (262-323)||(103718-103779)
[»] chr4 (4 HSPs)
chr4 (284-321)||(34657920-34657957)
chr4 (284-323)||(44673680-44673719)
chr4 (278-323)||(7190102-7190147)
chr4 (262-322)||(1924660-1924720)
[»] chr1 (6 HSPs)
chr1 (284-321)||(19054392-19054429)
chr1 (266-321)||(10423808-10423863)
chr1 (262-321)||(34528926-34528985)
chr1 (287-321)||(10032095-10032129)
chr1 (183-229)||(16816328-16816374)
chr1 (285-321)||(16816241-16816277)
[»] scaffold0238 (1 HSPs)
scaffold0238 (262-321)||(4451-4510)
[»] scaffold0062 (1 HSPs)
scaffold0062 (239-305)||(67366-67432)
[»] scaffold0006 (1 HSPs)
scaffold0006 (268-322)||(36678-36732)
[»] scaffold0291 (1 HSPs)
scaffold0291 (262-323)||(21879-21940)


Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 22705085 - 22705387
Alignment:
Q  20 aaggcagttgataagttggctaatatagatatgcactacagggttcaatttgattgacgactttttgtccagaattgaactttgatttctttcagaacaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22705085 aaggcagttgataagttggctaatatagatatgcactacagggttcaatttgattgacgactttttctccagaattgaactttgatttctttcagaacaa 22705184  T
Q  120 atgcggtctgcctaattacagattcccctagtctattggtttccgtttcctttttctttcttgttttgagagttttagcctaatcctccctctttgtata 219  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22705185 atacggtctgcctaattacagattcccctagtctattggtttccgtttcctttttctttcttgttttgagagttttagcctaatcccccctctttgtata 22705284  T
Q  220 tattttccccccnnnnnnnaataatattttgatcttgacagtataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttga 319  Q
    ||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22705285 tattttcccccctttttttaataatattttgatcttgacggtataggatggatgtttatcgaggtgccaacctagttgggatgtcggtgttacctcttga 22705384  T
Q  320 tgt 322  Q
    |||    
T  22705385 tgt 22705387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 24127890 - 24127829
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| |||| ||||| ||||||||||| |||||||||| || ||||||||||||||    
T  24127890 ataggatggaggtttctcgaggtgccaacctagctgggatgtcgatgatacctcttgatgtc 24127829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 15141950 - 15141911
Alignment:
Q  282 gttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15141950 gttgccaacctagttgggatgtcggtgtttcctcttgatg 15141911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 14641470 - 14641508
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  14641470 tgccaacctagttgggatgtcggtgttccctcttgatgt 14641508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 8462019 - 8462080
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||||| |||||||||||||||||||||| || | ||||||||||||    
T  8462019 ataggatggaggtctctcgaggtgccaacctagttgggatgtcgatgatgcctcttgatgtc 8462080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 13570475 - 13570536
Alignment:
Q  260 gtataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| |||||| ||| | |||||| ||||||||||||| |||||| ||||||||||    
T  13570475 gtataggatgaatgtttctcggggtgccaatctagttgggatgtaggtgttccctcttgatg 13570536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 13575035 - 13575072
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13575035 tgccaacctagttgggatgtcggtgttccctcttgatg 13575072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 13577574 - 13577611
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13577574 tgccaacctagttgggatgtcggtgttccctcttgatg 13577611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 20898996 - 20899033
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  20898996 tgccaacctagttgggatgtcggtgttgcctcttgatg 20899033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 24617777 - 24617740
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24617777 tgccaacctagttgggatgtcggtgtttcctcttgatg 24617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 14372230 - 14372191
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  14372230 tgccaacctagttgggatgtcgatgttgcctcttgatgtc 14372191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 8483676 - 8483639
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  8483676 tgccaacctagttgggatgtccgtgtttcctcttgatg 8483639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 13565947 - 13565984
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  13565947 tgccaacctagttgggatgtcgttgttccctcttgatg 13565984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 30884410 - 30884455
Alignment:
Q  260 gtataggatggatgtttatcgagttgccaacctagttgggatgtcg 305  Q
    |||||||||||| |||||||| | || |||||||||||||||||||    
T  30884410 gtataggatggaagtttatcggggtgtcaacctagttgggatgtcg 30884455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 9351190 - 9351142
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgtt 310  Q
    |||||||||| |||| ||| | |||||||||||||||||||||| ||||    
T  9351190 ataggatggaggtttctcggggtgccaacctagttgggatgtcgatgtt 9351142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 14982402 - 14982458
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttg 318  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||| |||| |||||||    
T  14982402 ataggatggaagtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctcttg 14982458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 18142953 - 18142794
Alignment:
Q  68 tttgattgacgactttttgtccagaattgaactttgatttctttcagaacaaatgcggtctgcctaattacagattcccctagtctattggtttccgttt 167  Q
    |||| |||||||||||   |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| | ||||||| | |||    
T  18142953 tttggttgacgactttacctccagaattgaactttgatttctttcggaacatatgcggtctgcctacttacatattcccctagtatgttggttttctttt 18142854  T
Q  168 cctttttctttcttgttttgagagttttagcctaatcctccctctttgtatatattttcc 227  Q
    || ||||||||||||||||||| ||||||| ||| ||  ||||||||| ||||| |||||    
T  18142853 ccgttttctttcttgttttgagggttttagtctagtcacccctctttgaatatactttcc 18142794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 13619160 - 13619101
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| |||   |||||||||||||||||||||||||  ||||| ||||||||||    
T  13619160 ataggatggaggttctccgagttgccaacctagttgggatgttagtgtttcctcttgatg 13619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 15718809 - 15718875
Alignment:
Q  239 aataatattttgatcttgacagtataggatggatgtttatcgagttgccaacctagttgggatgtcg 305  Q
    |||||||||||||  ||| ||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  15718809 aataatattttgagtttggcagtagaggatgggggtttatcgggatgccaacctagtttggatgtcg 15718875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 15894958 - 15894898
Alignment:
Q  171 ttttctttcttgttttgagagttttagcctaatcctccctctttgtatata-ttttcccccc 231  Q
    ||||||||||||||||||| ||||||| ||| |||||| || ||||||||| ||||||||||    
T  15894958 ttttctttcttgttttgagggttttagtctagtcctccatc-ttgtatatacttttcccccc 15894898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 17678355 - 17678294
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||||| |||||||||| ||||||||||| || | ||||||||||||    
T  17678355 ataggatggaggtctctcgaggtgccaacctaattgggatgtcgatgatgcctcttgatgtc 17678294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 20477437 - 20477498
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||| | |||||||||||||||||||||| || | ||||||||||||    
T  20477437 ataggatggaggtatctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgtc 20477498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 32234475 - 32234434
Alignment:
Q  279 cgagttgccaacctagttgggatgtcggtgttacctcttgat 320  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  32234475 cgaggtgccaacctagttgggatgtcggtgtgacctcctgat 32234434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 32222656 - 32222545
Alignment:
Q  120 atgcggtctgcctaattacagattcccctagtctattggtttccgtttcctttttctttcttgttttgagagttttagcctaatcctccctctttgtata 219  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| | ||| ||| || ||||||||||    
T  32222656 atgcggtctgcctaattacagattcccctagtctgttggttttcttttcctttttctttcttgttttgagagttttggtctagtcccccgtctttgtata 32222557  T
Q  220 tattttcccccc 231  Q
    |||||| |||||    
T  32222556 tatttttccccc 32222545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 1051382 - 1051323
Alignment:
Q  263 taggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||||| ||||  |||| ||||||||||||||||||||||||||| |||||||||||    
T  1051382 taggatggaggtttcccgaggtgccaacctagttgggatgtcggtgttccctcttgatgt 1051323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 25760032 - 25760091
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| ||||  |||  ||||||||||||||||||||||||||| ||||||||||    
T  25760032 ataggatggaggttttccgaagtgccaacctagttgggatgtcggtgttgcctcttgatg 25760091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 26953995 - 26953958
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26953995 tgccaacctagttgggatgtcggtgtttcctcttgatg 26953958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 51661714 - 51661753
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  51661714 tgccaacctagttgggatgtcgatgttgcctcttgatgtc 51661753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 10623279 - 10623242
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  10623279 tgccaacctagttaggatgtcggtgtttcctcttgatg 10623242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 18517712 - 18517749
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  18517712 tgccaacctagttgggatgtcgatgttgcctcttgatg 18517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 33956618 - 33956470
Alignment:
Q  47 gatatgcactacagggttcaatttgattgacgactttttgtccagaattgaactttgatttctttcagaacaaatgcggtctgcctaattacagattccc 146  Q
    ||||||||||||| |||||| |||| |||||| ||||   | |||||||||||||||||||||||||  ||| ||| |||||| ||||||||||||||||    
T  33956618 gatatgcactacatggttcagtttggttgacggctttaccttcagaattgaactttgatttctttcacgacagatgtggtctgtctaattacagattccc 33956519  T
Q  147 ctagtctattggtttccgtttcctttttctttcttgttttgagagtttt 195  Q
    ||||| | ||| ||| | ||||||||||||||||||||||||| |||||    
T  33956518 ctagtttgttgattttcttttcctttttctttcttgttttgagggtttt 33956470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 16290868 - 16290928
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    |||||||||| ||||  || | ||||||||||||||||||||||||||| |||||||||||    
T  16290868 ataggatggaggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgt 16290928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 24184795 - 24184757
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  24184795 tgccaacctagttgggatgtcggtgttccctcttgatgt 24184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 26657679 - 26657738
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| ||||  |||  ||||||| ||||||||||||||||||| ||||||||||    
T  26657679 ataggatggaggtttcccgaagtgccaacttagttgggatgtcggtgtttcctcttgatg 26657738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 18036860 - 18036822
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  18036860 tgccaacatagttgggatgtcggtgtttcctcttgatgt 18036822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 18695510 - 18695576
Alignment:
Q  239 aataatattttgatcttgacagtataggatggatgtttatcgagttgccaacctagttgggatgtcg 305  Q
    |||||||||||||  ||| ||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  18695510 aataatattttgagtttggcagtagaggatgggggtttatcgggatgccaacctagtttggatgtcg 18695576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 1046598 - 1046643
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtccatctc 329  Q
    ||||||| |||||||||||||||||||  ||| |||||||||||||    
T  1046598 tgccaacatagttgggatgtcggtgttgtctcctgatgtccatctc 1046643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 10568366 - 10568305
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| |||| ||| | ||||||||||||||| | |||| |||| ||||||||||||    
T  10568366 ataggatggaagtttctcggggtgccaacctagttggtaagtcgatgttgcctcttgatgtc 10568305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 26867471 - 26867527
Alignment:
Q  263 taggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttga 319  Q
    ||||||||| ||||  |||| |||||||||||||||||||||| || | ||||||||    
T  26867471 taggatggaggtttcccgaggtgccaacctagttgggatgtcgatgatgcctcttga 26867527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 29233375 - 29233435
Alignment:
Q  263 taggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||||||| |||||||  | ||||||| || ||||||||| |||||| ||||||||||||    
T  29233375 taggatggaagtttatctggatgccaacttaattgggatgttggtgttgcctcttgatgtc 29233435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 2040329 - 2040237
Alignment:
Q  50 atgcactacagggttcaatttgattgacgactttttgtccagaattgaactttgatttctttcagaacaaatgcggtctgcctaattacagat 142  Q
    ||||| |||| |||| | |||| |||||||||||   |||||||||||||||||||||||||| | | | ||||||| |||||||||||||||    
T  2040329 atgcagtacaaggtttagtttggttgacgactttacttccagaattgaactttgatttctttcgggatagatgcggtttgcctaattacagat 2040237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 2040167 - 2040084
Alignment:
Q  239 aataatattttgatcttgacagtataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    |||||||||||||  || || | |||||||| | ||| |||| | ||||||||||||||||||||||||| |||||||| ||||    
T  2040167 aataatattttgaattttacggcataggatgaaggttcatcgggatgccaacctagttgggatgtcggtgctacctcttcatgt 2040084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 12163411 - 12163466
Alignment:
Q  266 gatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||| ||||  |||| ||||||||||||||||||||||||||| ||||||||||    
T  12163411 gatggaggtttcccgaggtgccaacctagttgggatgtcggtgttgcctcttgatg 12163466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 1538024 - 1537963
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| ||||  | || || |||||||||||||||||||||||| ||||||||||||    
T  1538024 ataggatggaggtttccctaggtggcaacctagttgggatgtcggtgtttcctcttgatgtc 1537963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 3997204 - 3997165
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  3997204 tgccaacctagttgggatgtcggtgttgcctcctgatgtc 3997165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 32021979 - 32022026
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgt 309  Q
    |||||||||||| || ||||| ||| ||||||||||||||||||||||    
T  32021979 ataggatggatgcttctcgagatgctaacctagttgggatgtcggtgt 32022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 28780215 - 28780252
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  28780215 tgccaacctagttgggatgtcgatgttgcctcttgatg 28780252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 15468304 - 15468260
Alignment:
Q  279 cgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||| ||||||||||||||||||||||||||  |||| |||||||    
T  15468304 cgaggtgccaacctagttgggatgtcggtgtggcctcctgatgtc 15468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 2794 - 2854
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    |||||||||| |||| ||||| | |||||||||||||||||||| |||| |||||||||||    
T  2794 ataggatggaggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgt 2854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 798 - 837
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  798 tgccaacctagttgggatgtcggtgttgcctcttgatgtc 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 1560 - 1501
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| ||||  || | ||||||||||||||||||||||||||| ||||||||||    
T  1560 ataggatggaggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatg 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 2259463 - 2259404
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| ||||  || | ||||||||||||||||||||||||||| ||||||||||    
T  2259463 ataggatggaggtttcccgggatgccaacctagttgggatgtcggtgtttcctcttgatg 2259404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 4120553 - 4120591
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4120553 tgccaacctagttgggatgtcggtgttccctcttgatgt 4120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 5781146 - 5781085
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| |||| ||| | |||||||||||||||||||||| |||| |||||| |||||    
T  5781146 ataggatggaagtttctcgggatgccaacctagttgggatgtcgatgttgcctcttaatgtc 5781085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 15614771 - 15614808
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15614771 tgccaacctagttgggatgtcggtgttccctcttgatg 15614808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 21711582 - 21711545
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21711582 tgccaacctagttgggatgtcggtgttccctcttgatg 21711545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 3040781 - 3040727
Alignment:
Q  176 tttcttgttttgagagttttagcctaatcctccctctttgtatatattttccccc 230  Q
    |||||| ||||||| ||||| | ||| ||| ||||||||||||||||||||||||    
T  3040781 tttcttcttttgagggttttggtctagtcccccctctttgtatatattttccccc 3040727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 28682823 - 28682762
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||| | |||||||||||||||||||||| || | ||||||||||||    
T  28682823 ataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtc 28682762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 24122975 - 24123011
Alignment:
Q  287 caacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  24122975 caacctagttgagatgtcggtgtttcctcttgatgtc 24123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 11448 - 11486
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  11448 tgccaacctagttgggatgtcggtgttccctcttgatgt 11486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 14396 - 14335
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||| | |||||||||||||||||||||| || | ||||||||||||    
T  14396 ataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtc 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 2328 - 2365
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  2328 tgccaacctagttgggatgtcggtgttccctcttgatg 2365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 103718 - 103779
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||||||||  ||| ||| | |||||||||||||||||||||| |||| ||||||||||||    
T  103718 ataggatggagatttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtc 103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 34657957 - 34657920
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  34657957 tgccaacctagttgggatgtcggtgtttcctcttgatg 34657920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 44673719 - 44673680
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  44673719 tgccaacctagttgggatgtcgatgttgcctcttgatgtc 44673680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 7190102 - 7190147
Alignment:
Q  278 tcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    ||||| |||||||||||||||||||||| || | ||||||||||||    
T  7190102 tcgaggtgccaacctagttgggatgtcgatgatgcctcttgatgtc 7190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 1924720 - 1924660
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    |||||||||| || | ||| | |||||||||||||||||||||| || ||| |||||||||    
T  1924720 ataggatggaggtgtctcggggtgccaacctagttgggatgtcgatgatacatcttgatgt 1924660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 19054429 - 19054392
Alignment:
Q  284 tgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19054429 tgccaacctagttgggatgtcggtgtttcctcttgatg 19054392  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 10423863 - 10423808
Alignment:
Q  266 gatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||| |||| ||| | |||||||||||||||||||||| |||| ||||||||||    
T  10423863 gatggaggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatg 10423808  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 34528985 - 34528926
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| ||||  || | |||||||||||||||||||||| |||| ||||||||||    
T  34528985 ataggatggaggtttcccggggtgccaacctagttgggatgtcgctgtttcctcttgatg 34528926  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 10032129 - 10032095
Alignment:
Q  287 caacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||||||||||||||||| ||||||||||    
T  10032129 caacctagttgggatgtcggtgtttcctcttgatg 10032095  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 16816374 - 16816328
Alignment:
Q  183 ttttgagagttttagcctaatcctccctctttgtatatattttcccc 229  Q
    ||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  16816374 ttttgagggttttggcctagtcctccctcgttgtatatattttcccc 16816328  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 16816277 - 16816241
Alignment:
Q  285 gccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  16816277 gccaacctagttgggatgttggtgtttcctcttgatg 16816241  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 4451 - 4510
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatg 321  Q
    |||||||||| || | ||||| |||||||||||||||||||||  || ||||||||||||    
T  4451 ataggatggaggtctctcgaggtgccaacctagttgggatgtcaatgatacctcttgatg 4510  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 67366 - 67432
Alignment:
Q  239 aataatattttgatcttgacagtataggatggatgtttatcgagttgccaacctagttgggatgtcg 305  Q
    |||||||||||||  ||| ||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  67366 aataatattttgagtttggcagtagaggatgggggtttatcgggatgccaacctagtttggatgtcg 67432  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 36732 - 36678
Alignment:
Q  268 tggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgt 322  Q
    |||| |||| ||||| | |||||||||||||||||||| |||| |||||||||||    
T  36732 tggaggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgt 36678  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 21940 - 21879
Alignment:
Q  262 ataggatggatgtttatcgagttgccaacctagttgggatgtcggtgttacctcttgatgtc 323  Q
    |||||||||| || | ||| | |||||||||||||||||||||| || | ||||||||||||    
T  21940 ataggatggaggtctctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtc 21879  T

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