View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7861_low_48 (Length: 235)
Name: NF7861_low_48
Description: NF7861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7861_low_48 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 1532564 - 1532346
Alignment:
| Q |
13 |
aatatttccttgcattggaagcatataaatccctgaatgaatttaatactaaaaacaaaattatactattgcaaattgaaatccaaacatatcttccaat |
112 |
Q |
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| T |
1532564 |
aatatttccttgcattggaagcatataaatccctgaatgaatttaatactaaaaacaaaattatactattgcaaattgaaatccaaacatatcttccaat |
1532465 |
T |
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| Q |
113 |
tggtgacaatgatctgtttgaggctgagaaagcaacctcactaagaagtaactcttttacacattctcttcactggtagacctttaacttggtcaacttt |
212 |
Q |
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| T |
1532464 |
tggtgacaatgatctgtttgaggctgagaaagcaacctcactaagaagtaactc-tgtacacattctcttcactggtaaacctttaacttggtcaacttt |
1532366 |
T |
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| Q |
213 |
atgaagcacggacactcctc |
232 |
Q |
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|||||||||||||||||||| |
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| T |
1532365 |
atgaagcacggacactcctc |
1532346 |
T |
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