View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7861_low_49 (Length: 222)
Name: NF7861_low_49
Description: NF7861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7861_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 33093966 - 33094175
Alignment:
| Q |
12 |
cacacacgtagtaccatatctctagtctcatctagcataattaagttctcacttcacatcatttcatcacaattctccca--------------caaaat |
97 |
Q |
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| T |
33093966 |
cacacacgtagtaccatatctctagtctgatctagcataattaagttctcacttcacatcatttcatcacaattctcccacacgacacgacccacaaaat |
33094065 |
T |
|
| Q |
98 |
aatggccacgaaaccaataaactctcctaattaatgcttttcccgttacttttgaaatttctttgcattaaatatctactagtactaattcattttatga |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33094066 |
aatggccacgaaaccaataaactctcctaattaatgcttttcccgttacttttgaaatttctttgcattaaatatctactagtactaattcattttatga |
33094165 |
T |
|
| Q |
198 |
tatcatatat |
207 |
Q |
| |
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|||||||||| |
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| T |
33094166 |
tatcatatat |
33094175 |
T |
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