View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7863_high_34 (Length: 326)
Name: NF7863_high_34
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7863_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 36974647 - 36974967
Alignment:
| Q |
1 |
tttggggttgcagggatacagagagaatctaactaaattataacacatctcgtgcttgaagattcaacctaacccgacacaccaagtggaacaccacctt |
100 |
Q |
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| T |
36974647 |
tttggggttgcagggatacagagagaatctaactaaattataacacatctcgtgcttgaagcttcaacctaacccgacacaccaagtggaacaccacctt |
36974746 |
T |
|
| Q |
101 |
ttctatttgtacacttacttttgaacgtggcttttcctatctttgttaagttttttattttcaaattgcctcatatagttgatgatgaaaatatataact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36974747 |
ttctatttgtacacttacttttgaacgtggcttttcctatttttgttaagttttttattttcaaattgcctcatatagttgatgatgaaaatatataact |
36974846 |
T |
|
| Q |
201 |
atggaactatgacgtgggtgacataatcctattgactattgttttgattttttcttagaagaatctcaataccatatgagtgaaaaagaaatcaatgaga |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36974847 |
atggaactatgacgtgggtgacataatcctattgactattgctttgattttttcttagaagaatctcaataccatatgagtgaaaaagaaatcaatgaga |
36974946 |
T |
|
| Q |
301 |
gaatgataaaattcatcttgt |
321 |
Q |
| |
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||||||||||||||||||||| |
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| T |
36974947 |
gaatgataaaattcatcttgt |
36974967 |
T |
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