View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7863_high_40 (Length: 262)
Name: NF7863_high_40
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7863_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 3240737 - 3240968
Alignment:
| Q |
20 |
gtgtgtcagtaccttctcatgcaattaaagcaccaaaaaagcttcgcagaaggatcgtaagacgtcgtcgtcgaaagatctcaagttcagctgcaaatga |
119 |
Q |
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| T |
3240737 |
gtgtgtcagtaccttctcatgcaattaaagcaccaaaaaagcttcgcagaaggatcgtaagacgtcgtcgtcgaaagatctcaagttcagctgcaaatga |
3240836 |
T |
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| Q |
120 |
tatcaataagttgaataacaatggaggaatgcatgtaacagattattctgttagtgaatatgttcatatggactttgaaaatggtgcaaaaacaaaatgt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3240837 |
tatcaataagttgaataacaatggaggaatgcatgtaacagattattctgttagtgaatatgttcatatggactttgaaaatggtgcaaaaacaaaatgt |
3240936 |
T |
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| Q |
220 |
agaagatctgaagtttctaattcagcatacca |
251 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3240937 |
agaagatctgaagtttctaattcagcatacca |
3240968 |
T |
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