View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7863_low_10 (Length: 638)
Name: NF7863_low_10
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7863_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 597; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 14 - 614
Target Start/End: Original strand, 2767326 - 2767926
Alignment:
| Q |
14 |
atggacatcagcttcaagagtgagatagtgaagattggaaggatctgatatgttgaagtagaagctctcattccaaacaggattaagatccttttcttta |
113 |
Q |
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| T |
2767326 |
atggacataagcttcaagagtgagatagtgaagattggaaggatctgatatgttgaagtagaagctctcattccaaacaggattaagatccttttcttta |
2767425 |
T |
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| Q |
114 |
atggttgttcggaacttttggccgtcgaagtaaagttctacaaaggcattagaagaaccttctccatctttgggtagtagattgtgagcaccaaccacat |
213 |
Q |
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| T |
2767426 |
atggttgttcggaacttttggccgtcgaagtaaagttctacaaaggcattagaagaaccttctccatctttgggtagtagattgtgagcaccaaccacat |
2767525 |
T |
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| Q |
214 |
ctacccctaactttaagttgatcataattaaatgtggttccttaacaactgaaattttgagaatttagatacctacaaagagaggaattcaaacatataa |
313 |
Q |
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| T |
2767526 |
ctacccctaactttaagttgatcataattaaatgtggttccttaacaactgaaattttgagaatttagatacctacaaagagaggaattcaaacatataa |
2767625 |
T |
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| Q |
314 |
ggatgcttatattatgatatgcctattttgtatgcatattcataataaaacatctaaaaatgtgatattatcagataaactgtgatcattagaataagat |
413 |
Q |
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| T |
2767626 |
ggatgcttatattatgatatgcctattttgtatgcatattcataataaaacatctaaaaatgtgatattatcagataaactgtgatcattagaataagat |
2767725 |
T |
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| Q |
414 |
ccaaacatataaggaatgctatttgttaatctacaacaagctacaaaagatggaacaatctcataatcaacataataagatcaaactatatacacaaatt |
513 |
Q |
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| T |
2767726 |
ccaaacatataaggaatgctatttgttaatctacaacaagctacaaaagatggaacaatctcataatcaacataataagatcaaactatatacacaaatt |
2767825 |
T |
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| Q |
514 |
ggtattaaagctccggtttcttagaaaaaatgggtctgactaataagaaatttaactagaatgaaagtaaagtctgactaatgattattctaatagaaaa |
613 |
Q |
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| T |
2767826 |
ggtattaaagctccggtttcttagaaaaaatgggtctgactaataagaaatttaactagaatgaaagtaaagtctgactaatgattattctaatagaaaa |
2767925 |
T |
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| Q |
614 |
t |
614 |
Q |
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| T |
2767926 |
t |
2767926 |
T |
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