View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7863_low_24 (Length: 507)

Name: NF7863_low_24
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7863_low_24
NF7863_low_24
[»] chr1 (2 HSPs)
chr1 (12-507)||(1976353-1976848)
chr1 (12-507)||(1983719-1984214)
[»] chr2 (4 HSPs)
chr2 (12-507)||(27161586-27162087)
chr2 (131-507)||(22910498-22910880)
chr2 (16-226)||(23720136-23720352)
chr2 (16-74)||(22910449-22910507)
[»] chr5 (1 HSPs)
chr5 (12-507)||(20956101-20956602)
[»] scaffold0313 (2 HSPs)
scaffold0313 (12-505)||(3645-4144)
scaffold0313 (12-505)||(17802-18301)
[»] scaffold0764 (1 HSPs)
scaffold0764 (12-505)||(2468-2970)
[»] scaffold1531 (1 HSPs)
scaffold1531 (228-507)||(1408-1685)
[»] scaffold0059 (2 HSPs)
scaffold0059 (294-447)||(42511-42664)
scaffold0059 (97-154)||(42347-42404)


Alignment Details
Target: chr1 (Bit Score: 456; Significance: 0; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 12 - 507
Target Start/End: Original strand, 1976353 - 1976848
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1976353 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 1976452  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggctgtgcatcttggtacacattcaa 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1976453 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggttgtgcatcttggtacacatgcaa 1976552  T
Q  212 atctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactcattctt 311  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1976553 atctgtgctaggatcttccatatttagatcaaagccagtttgattatcagcttgctcaaactcttgaggatccatttcatcgtgtccctcactcattctt 1976652  T
Q  312 tgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgctcagtat 411  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  1976653 tgagagacaaggatttcagccacatcctgcatgtcttgatcattttcctgagatccttataccacaacataagcaacttcttgagcagtttgctcagtat 1976752  T
Q  412 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1976753 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 1976848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 12 - 507
Target Start/End: Original strand, 1983719 - 1984214
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1983719 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 1983818  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggctgtgcatcttggtacacattcaa 211  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1983819 tctgaactatgattgcaggaatttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggttgtgcatcttggtacacatgcaa 1983918  T
Q  212 atctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactcattctt 311  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1983919 atctgtgctaggatcttccatatttagatcaaagccagtttgattatcagcttgctcaaactcttgaggatccatttcatcgtgtccctcactcattctt 1984018  T
Q  312 tgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgctcagtat 411  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1984019 tgagagacaaggatttcagccacatcctgcatgtcttgatcattttcctgagatccttttgccacatcataagcaacttcttgagcagttggctcagtat 1984118  T
Q  412 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1984119 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagtatcagttgagtcaacattctgaagtt 1984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 439; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 12 - 507
Target Start/End: Original strand, 27161586 - 27162087
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27161586 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 27161685  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  27161686 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 27161785  T
Q  206 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactc 305  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  27161786 attcacatctgagcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 27161885  T
Q  306 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgct 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  27161886 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 27161985  T
Q  406 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27161986 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 27162085  T
Q  506 tt 507  Q
    ||    
T  27162086 tt 27162087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 131 - 507
Target Start/End: Original strand, 22910498 - 22910880
Alignment:
Q  131 attttcttgaagttcctgaatcatttcatgagcttgc------acttcctcattgttttcaggctgtgcatcttggtacacattcaaatctgtgcttgga 224  Q
    |||||||||||||||||||||||||| |||||||| |      |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  22910498 attttcttgaagttcctgaatcatttaatgagcttcctgaaacacttcctcattgttttcaggttgtgcatcttggtacacattcaaatatgagcttgga 22910597  T
Q  225 tcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactcattctttgagagacaagaa 324  Q
    || |||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22910598 tcctccacatttagatcaaagccagtttggttttcagcttgctcaatttcttgagaatccatttcatcatgtccctcactcatcctttgagagacaagaa 22910697  T
Q  325 tttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagca-acttcttgagcagtttgctcagtattttcttcaactt 423  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||| | |  || ||| | || | |||||  || | || ||||| ||||||||||||||    
T  22910698 tttcagcaacatcatgcatgtcttgatcatcttcctgagatccttcttcagcagcatcaacatatttctt-tgctgctttctcagcattttcttcaactt 22910796  T
Q  424 cattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 507  Q
    ||| |||||||||||||||||||| ||| |    |  ||||||||||||| ||||||||  |||||||||||| ||||||||||    
T  22910797 catcaactttctgaagttgttcagcaggtgagacagtaacattctgaactgcagcagcactagttgagtcaactttctgaagtt 22910880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 23720352 - 23720136
Alignment:
Q  16 cagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacattctg 115  Q
    ||||||| || |||||||||||||||||||| || ||| ||||||| |||||||| |||||||||||||||||||||| ||||||| ||||| |||| ||    
T  23720352 cagagggcagagatcctgatgcttgaggaatggggtcaactgacatttcattctcctgaggcaagctaggttcagcagttgcatttttctgagcattatg 23720253  T
Q  116 agctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacacattc 209  Q
    | || |||||||||||||||||||||||| ||||||||||||| || |||      |||| ||||||||||||||||||||||||||||||||||||||     
T  23720252 aactatgattgcaggattttcttgaagtttctgaatcatttcacgatcttcctgaagcacatcctcattgttttcaggctgtgcatcttggtacacattt 23720153  T
Q  210 aaatctgtgcttggatc 226  Q
    ||||||| |||||||||    
T  23720152 aaatctgagcttggatc 23720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22910449 - 22910507
Alignment:
Q  16 cagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttga 74  Q
    ||||||| || |||||||||||||||||||| || ||| ||||||| ||||| ||||||    
T  22910449 cagagggcagagatcctgatgcttgaggaatggggtcaactgacatttcattttcttga 22910507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 12 - 507
Target Start/End: Complemental strand, 20956602 - 20956101
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20956602 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 20956503  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  20956502 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 20956403  T
Q  206 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactc 305  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  20956402 attcacatctgagcttggatcttccacatttagatcaaggccagtttgattttcagcttgctcaaaaccttgaggctccatttcatcatgtccatcactc 20956303  T
Q  306 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgct 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  20956302 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 20956203  T
Q  406 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  20956202 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcaacagcaacagttgagtcaacattctgaag 20956103  T
Q  506 tt 507  Q
    ||    
T  20956102 tt 20956101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 393; Significance: 0; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 12 - 505
Target Start/End: Complemental strand, 4144 - 3645
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4144 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 4045  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  4044 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 3945  T
Q  206 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactc 305  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3944 attcacatctgagcttggatcttccacatttagattaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 3845  T
Q  306 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgct 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  3844 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 3745  T
Q  406 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 505  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||  ||||||||||||||| |||||| || ||||||||||||| ||||||||    
T  3744 cagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctgaag 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 12 - 505
Target Start/End: Complemental strand, 18301 - 17802
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18301 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 18202  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  18201 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 18102  T
Q  206 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactc 305  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  18101 attcacatctgagcttggatcttccacatttagattaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 18002  T
Q  306 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgct 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  18001 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 17902  T
Q  406 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 505  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||  ||||||||||||||| |||||| || ||||||||||||| ||||||||    
T  17901 cagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctgaag 17802  T

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Target: scaffold0764 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 12 - 505
Target Start/End: Original strand, 2468 - 2970
Alignment:
Q  12 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 111  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2468 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 2567  T
Q  112 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  2568 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 2667  T
Q  206 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttga--ttttcagcttgctcaaactcttgaggatccatttcatcatgtccctcac 303  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2668 attcacatctgagcttggatcttccacatttagattaaagccagtttgtatttttcagcttgctcaaactcttgaggctccatttcatcatgtccatcac 2767  T
Q  304 tcattcttt-gagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagttt 402  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  2768 tcattcttttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagttt 2867  T
Q  403 gctcagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctg 502  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| |||  ||||||||||||||| |||||| || ||||||||||||| |||||    
T  2868 gctcagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctg 2967  T
Q  503 aag 505  Q
    |||    
T  2968 aag 2970  T

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Target: scaffold1531 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold1531
Description:

Target: scaffold1531; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 228 - 507
Target Start/End: Complemental strand, 1685 - 1408
Alignment:
Q  228 tccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggatccatttcatcatgtccctcactcattctttgagagacaagaattt 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  1685 tccacatttagatcaaagccagtttgattatcagcttgctcaatttcttgagaatccatttcatcatgtccctcactcatcctttgagagacaaggattt 1586  T
Q  328 cagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttcttgagcagtttgctcagtattttcttcaacttcatt 427  Q
    |||||||||| ||||||||||| ||||||||||||||| ||| | | ||   || |  |||||||||||  |||| |||| ||||| ||||||||||||     
T  1585 cagccacatcatgcatgtcttggtcattttcctgagatgcttcttcaac--tatcaataacttcttgagttgttttctcattatttccttcaacttcatc 1488  T
Q  428 aactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 507  Q
    ||||||||||||||||| || ||| | |  | |||| |||||| | |||||||||  |||||||||||| |||| |||||    
T  1487 aactttctgaagttgtttagcaggtgaaacaacaacgttctgatcatcagcagcactagttgagtcaactttctaaagtt 1408  T

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Target: scaffold0059 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 42511 - 42664
Alignment:
Q  294 tgtccctcactcattctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttttaccacatcataagcaacttctt 393  Q
    ||||| ||||||||| ||| ||| || || |||||||||||||| |||||||| ||||||| || ||||||| | ||| | ||| ||| | |||| |  |    
T  42511 tgtccttcactcattatttaagaaaccaggatttcagccacatcatgcatgtcctgatcatctttctgagattccttttcaacaacatcaacaacgttct 42610  T
Q  394 gagcagtttgctcagtattttcttcaacttcattaactttctgaagttgttcag 447  Q
    || | |||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  42611 gaactgttttctcagtattttcttcaacttcaacaactttctgaagttgttcag 42664  T

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Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 42347 - 42404
Alignment:
Q  97 catttgtctgaacattctgagctgtgattgcaggattttcttgaagttcctgaatcat 154  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||  |||||||||||    
T  42347 catttgtttgaacattctgaactatgatttcaggattttcttgaatatcctgaatcat 42404  T

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