View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7863_low_49 (Length: 391)

Name: NF7863_low_49
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7863_low_49
NF7863_low_49
[»] chr5 (27 HSPs)
chr5 (18-373)||(27270410-27270778)
chr5 (328-373)||(27270124-27270169)
chr5 (328-373)||(27270269-27270314)
chr5 (189-234)||(25175262-25175307)
chr5 (189-233)||(15735704-15735748)
chr5 (189-233)||(20595832-20595876)
chr5 (189-233)||(20602118-20602162)
chr5 (189-233)||(20608409-20608453)
chr5 (189-233)||(22317514-22317558)
chr5 (189-233)||(25006809-25006853)
chr5 (189-233)||(25116172-25116216)
chr5 (189-233)||(30759656-30759700)
chr5 (163-225)||(26306847-26306909)
chr5 (192-233)||(22855734-22855775)
chr5 (189-233)||(18073070-18073114)
chr5 (189-233)||(18484213-18484257)
chr5 (189-233)||(20790715-20790759)
chr5 (189-225)||(21387568-21387604)
chr5 (189-233)||(23600637-23600681)
chr5 (189-233)||(23748221-23748265)
chr5 (189-233)||(24219916-24219960)
chr5 (189-233)||(24940704-24940748)
chr5 (189-233)||(24953175-24953219)
chr5 (189-225)||(26847822-26847858)
chr5 (187-233)||(17412740-17412786)
chr5 (122-192)||(28360054-28360124)
chr5 (192-233)||(20444843-20444884)
[»] chr2 (25 HSPs)
chr2 (40-369)||(19805470-19805816)
chr2 (118-231)||(17334535-17334648)
chr2 (189-233)||(5500266-5500310)
chr2 (189-233)||(22665232-22665276)
chr2 (189-233)||(23159386-23159430)
chr2 (189-233)||(23570643-23570687)
chr2 (189-233)||(23644115-23644159)
chr2 (189-233)||(24171516-24171560)
chr2 (189-233)||(25144758-25144802)
chr2 (189-233)||(25804268-25804312)
chr2 (189-233)||(27631666-27631710)
chr2 (189-233)||(27768817-27768861)
chr2 (189-233)||(16775821-16775865)
chr2 (189-233)||(17590577-17590621)
chr2 (189-233)||(22044661-22044705)
chr2 (189-233)||(24795286-24795330)
chr2 (189-233)||(25357681-25357725)
chr2 (193-233)||(25370890-25370930)
chr2 (189-233)||(27627751-27627795)
chr2 (189-222)||(24178194-24178227)
chr2 (192-233)||(24321339-24321380)
chr2 (189-233)||(11616-11660)
chr2 (189-233)||(117713-117757)
chr2 (189-233)||(23798923-23798967)
chr2 (189-233)||(24506820-24506864)
[»] chr3 (42 HSPs)
chr3 (32-193)||(1735670-1735831)
chr3 (189-233)||(3245589-3245633)
chr3 (189-233)||(3339227-3339271)
chr3 (189-233)||(4382916-4382960)
chr3 (189-233)||(10546937-10546981)
chr3 (189-233)||(10602473-10602517)
chr3 (189-233)||(12160208-12160252)
chr3 (189-233)||(12776535-12776579)
chr3 (189-233)||(13001426-13001470)
chr3 (189-233)||(13136211-13136255)
chr3 (189-233)||(13504882-13504926)
chr3 (189-233)||(14348589-14348633)
chr3 (189-233)||(15946779-15946823)
chr3 (189-233)||(20584273-20584317)
chr3 (189-233)||(27356729-27356773)
chr3 (189-233)||(3279354-3279398)
chr3 (189-233)||(7600525-7600569)
chr3 (189-233)||(9360972-9361016)
chr3 (189-233)||(10160174-10160218)
chr3 (189-233)||(11398379-11398423)
chr3 (189-233)||(11947577-11947621)
chr3 (189-233)||(12187077-12187121)
chr3 (189-233)||(13187418-13187462)
chr3 (189-233)||(13195459-13195503)
chr3 (189-233)||(13601232-13601276)
chr3 (189-233)||(14445769-14445813)
chr3 (189-225)||(15556943-15556979)
chr3 (189-233)||(15619284-15619328)
chr3 (189-233)||(15645171-15645215)
chr3 (189-233)||(16373566-16373610)
chr3 (189-233)||(16448761-16448805)
chr3 (189-233)||(17388000-17388044)
chr3 (189-233)||(20156516-20156559)
chr3 (189-233)||(37942548-37942592)
chr3 (187-233)||(12193489-12193535)
chr3 (189-234)||(8686388-8686433)
chr3 (196-233)||(17045865-17045902)
chr3 (196-233)||(17048025-17048062)
chr3 (189-233)||(2721467-2721510)
chr3 (189-233)||(10147181-10147225)
chr3 (189-225)||(13068320-13068356)
chr3 (189-225)||(13097882-13097918)
[»] chr4 (25 HSPs)
chr4 (32-192)||(13898599-13898759)
chr4 (34-192)||(48085559-48085717)
chr4 (189-233)||(10630920-10630964)
chr4 (189-233)||(11496615-11496659)
chr4 (189-233)||(13823083-13823127)
chr4 (189-233)||(14653999-14654043)
chr4 (189-233)||(15254518-15254562)
chr4 (189-233)||(17484911-17484955)
chr4 (189-233)||(18081460-18081504)
chr4 (120-192)||(18273304-18273376)
chr4 (189-233)||(38426893-38426937)
chr4 (189-233)||(42709732-42709776)
chr4 (189-233)||(56580540-56580584)
chr4 (190-233)||(15865658-15865701)
chr4 (174-232)||(14233258-14233316)
chr4 (120-193)||(20958735-20958808)
chr4 (189-233)||(3354810-3354854)
chr4 (189-233)||(10650558-10650602)
chr4 (189-233)||(15260110-15260154)
chr4 (189-233)||(15409540-15409584)
chr4 (189-233)||(16682924-16682968)
chr4 (187-233)||(17296248-17296294)
chr4 (189-223)||(18292118-18292152)
chr4 (189-233)||(9488879-9488923)
chr4 (189-225)||(45234233-45234269)
[»] chr1 (16 HSPs)
chr1 (40-192)||(27775944-27776095)
chr1 (174-231)||(18478219-18478276)
chr1 (189-233)||(17094602-17094646)
chr1 (189-233)||(19364199-19364243)
chr1 (189-233)||(20237626-20237670)
chr1 (189-233)||(27047044-27047088)
chr1 (189-233)||(52938622-52938666)
chr1 (192-233)||(8653286-8653327)
chr1 (192-233)||(19875648-19875689)
chr1 (189-233)||(14070675-14070719)
chr1 (189-233)||(21784473-21784517)
chr1 (189-233)||(21798663-21798707)
chr1 (191-233)||(16382578-16382620)
chr1 (189-233)||(3990109-3990153)
chr1 (189-233)||(4027850-4027894)
chr1 (189-225)||(8947516-8947552)
[»] scaffold0323 (1 HSPs)
scaffold0323 (40-193)||(6426-6578)
[»] chr7 (37 HSPs)
chr7 (34-192)||(25752025-25752183)
chr7 (118-224)||(1826264-1826370)
chr7 (120-193)||(19690044-19690117)
chr7 (189-233)||(538756-538800)
chr7 (189-233)||(825794-825838)
chr7 (189-233)||(4312727-4312771)
chr7 (189-233)||(8718035-8718079)
chr7 (189-233)||(9583063-9583107)
chr7 (189-233)||(11921308-11921352)
chr7 (189-233)||(13658036-13658080)
chr7 (189-233)||(14221719-14221763)
chr7 (189-233)||(14551269-14551313)
chr7 (189-233)||(15065939-15065983)
chr7 (189-233)||(15916777-15916821)
chr7 (189-233)||(16119850-16119894)
chr7 (189-233)||(16465617-16465661)
chr7 (189-233)||(18287772-18287816)
chr7 (189-233)||(27291507-27291551)
chr7 (177-231)||(15940731-15940785)
chr7 (192-233)||(23515237-23515278)
chr7 (189-233)||(4461243-4461287)
chr7 (189-233)||(5397286-5397330)
chr7 (189-225)||(8780937-8780973)
chr7 (189-225)||(9264940-9264976)
chr7 (189-233)||(12548806-12548850)
chr7 (189-233)||(12567184-12567228)
chr7 (189-233)||(13674026-13674070)
chr7 (189-225)||(15206585-15206621)
chr7 (189-233)||(16532266-16532310)
chr7 (189-233)||(16633352-16633396)
chr7 (189-233)||(18593353-18593397)
chr7 (189-233)||(18618287-18618331)
chr7 (189-233)||(48801777-48801821)
chr7 (187-230)||(4791381-4791424)
chr7 (190-233)||(9004122-9004165)
chr7 (189-233)||(9194545-9194589)
chr7 (189-233)||(20108539-20108583)
[»] scaffold0035 (2 HSPs)
scaffold0035 (174-231)||(88346-88403)
scaffold0035 (189-233)||(50507-50551)
[»] scaffold0029 (2 HSPs)
scaffold0029 (177-231)||(77379-77433)
scaffold0029 (189-233)||(123539-123583)
[»] scaffold0011 (3 HSPs)
scaffold0011 (187-233)||(172272-172318)
scaffold0011 (189-233)||(162013-162057)
scaffold0011 (189-233)||(164404-164448)
[»] scaffold0158 (1 HSPs)
scaffold0158 (174-231)||(31415-31472)
[»] scaffold0096 (1 HSPs)
scaffold0096 (189-234)||(38509-38554)
[»] scaffold0974 (1 HSPs)
scaffold0974 (189-233)||(1273-1317)
[»] scaffold0861 (1 HSPs)
scaffold0861 (189-233)||(925-969)
[»] scaffold0773 (1 HSPs)
scaffold0773 (189-233)||(642-686)
[»] scaffold0582 (1 HSPs)
scaffold0582 (189-233)||(8824-8868)
[»] scaffold0566 (1 HSPs)
scaffold0566 (189-233)||(2773-2817)
[»] scaffold0512 (1 HSPs)
scaffold0512 (189-233)||(5250-5294)
[»] scaffold0375 (1 HSPs)
scaffold0375 (189-233)||(12749-12793)
[»] scaffold0230 (1 HSPs)
scaffold0230 (189-233)||(15848-15892)
[»] scaffold0156 (1 HSPs)
scaffold0156 (189-233)||(996-1040)
[»] scaffold0056 (1 HSPs)
scaffold0056 (189-233)||(42255-42299)
[»] scaffold0020 (1 HSPs)
scaffold0020 (189-233)||(121117-121161)
[»] chr8 (24 HSPs)
chr8 (189-233)||(11346954-11346998)
chr8 (189-233)||(19767695-19767739)
chr8 (189-233)||(20002285-20002329)
chr8 (189-233)||(20038982-20039026)
chr8 (189-233)||(21098795-21098839)
chr8 (189-233)||(21104116-21104160)
chr8 (189-233)||(21831187-21831231)
chr8 (189-233)||(21843525-21843569)
chr8 (189-233)||(22033556-22033600)
chr8 (189-233)||(22099656-22099700)
chr8 (189-233)||(22370113-22370157)
chr8 (177-231)||(19902162-19902216)
chr8 (189-233)||(23455108-23455153)
chr8 (189-233)||(8314638-8314682)
chr8 (189-233)||(16418621-16418665)
chr8 (189-233)||(17620916-17620960)
chr8 (189-233)||(21382264-21382308)
chr8 (189-233)||(21939997-21940041)
chr8 (189-233)||(22102563-22102607)
chr8 (189-233)||(22817761-22817805)
chr8 (189-233)||(23911610-23911654)
chr8 (189-233)||(24034185-24034229)
chr8 (189-233)||(8322847-8322891)
chr8 (189-233)||(20712604-20712648)
[»] chr6 (24 HSPs)
chr6 (189-233)||(2181224-2181268)
chr6 (189-233)||(15699725-15699769)
chr6 (189-233)||(18448304-18448348)
chr6 (189-233)||(22165550-22165594)
chr6 (189-233)||(22243982-22244026)
chr6 (189-233)||(23023257-23023301)
chr6 (189-233)||(25963412-25963456)
chr6 (189-233)||(25968059-25968103)
chr6 (189-233)||(30671808-30671852)
chr6 (192-233)||(20107784-20107825)
chr6 (189-234)||(29595858-29595903)
chr6 (189-233)||(18184875-18184919)
chr6 (189-233)||(20170413-20170457)
chr6 (189-233)||(21560555-21560599)
chr6 (189-233)||(22061504-22061548)
chr6 (189-233)||(22767117-22767161)
chr6 (189-233)||(24855246-24855290)
chr6 (189-225)||(25631270-25631306)
chr6 (189-233)||(35270983-35271027)
chr6 (138-192)||(7435216-7435270)
chr6 (189-233)||(11204015-11204059)
chr6 (189-233)||(18731886-18731930)
chr6 (189-233)||(18854181-18854225)
chr6 (189-233)||(25625854-25625898)
[»] scaffold0031 (1 HSPs)
scaffold0031 (189-232)||(22774-22817)
[»] scaffold0258 (1 HSPs)
scaffold0258 (192-233)||(22159-22200)
[»] scaffold0215 (1 HSPs)
scaffold0215 (189-234)||(616-661)
[»] scaffold0123 (1 HSPs)
scaffold0123 (189-234)||(18217-18262)
[»] scaffold0679 (1 HSPs)
scaffold0679 (189-233)||(8104-8148)
[»] scaffold0506 (1 HSPs)
scaffold0506 (189-233)||(2288-2332)
[»] scaffold0420 (1 HSPs)
scaffold0420 (189-233)||(10207-10251)
[»] scaffold0404 (2 HSPs)
scaffold0404 (189-233)||(3479-3523)
scaffold0404 (189-233)||(1208-1252)
[»] scaffold0384 (1 HSPs)
scaffold0384 (189-233)||(10731-10775)
[»] scaffold0162 (1 HSPs)
scaffold0162 (189-233)||(35105-35149)
[»] scaffold0116 (1 HSPs)
scaffold0116 (189-233)||(37744-37788)
[»] scaffold0113 (1 HSPs)
scaffold0113 (189-233)||(383-427)
[»] scaffold0089 (1 HSPs)
scaffold0089 (189-233)||(54850-54894)
[»] scaffold0034 (1 HSPs)
scaffold0034 (189-225)||(58629-58665)
[»] scaffold0032 (1 HSPs)
scaffold0032 (189-233)||(97727-97771)
[»] scaffold0026 (1 HSPs)
scaffold0026 (189-233)||(11219-11263)
[»] scaffold0059 (1 HSPs)
scaffold0059 (190-225)||(12574-12609)
[»] scaffold0013 (1 HSPs)
scaffold0013 (190-225)||(232789-232824)
[»] scaffold0004 (1 HSPs)
scaffold0004 (189-232)||(251871-251914)
[»] scaffold0226 (1 HSPs)
scaffold0226 (177-231)||(3251-3305)
[»] scaffold0094 (1 HSPs)
scaffold0094 (187-233)||(1204-1250)
[»] scaffold1225 (1 HSPs)
scaffold1225 (189-233)||(1857-1901)
[»] scaffold0825 (1 HSPs)
scaffold0825 (189-233)||(2853-2897)
[»] scaffold0328 (1 HSPs)
scaffold0328 (189-233)||(511-555)
[»] scaffold0315 (1 HSPs)
scaffold0315 (189-225)||(14663-14699)
[»] scaffold0278 (1 HSPs)
scaffold0278 (189-225)||(13003-13039)
[»] scaffold0117 (1 HSPs)
scaffold0117 (189-233)||(45229-45273)
[»] scaffold0037 (2 HSPs)
scaffold0037 (189-233)||(72573-72617)
scaffold0037 (189-233)||(84763-84807)


Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 373
Target Start/End: Complemental strand, 27270778 - 27270410
Alignment:
Q  18 catcattgactggttcaagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataaga 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27270778 catcattggctggttcaagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataaaa 27270679  T
Q  118 catgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgc 217  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27270678 catgcaaaacacaataaacaaccctaaaataaataaaaataaatttatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgc 27270579  T
Q  218 ttgtcctcgagcaaaaaccaagggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaatt------------------gctttgttctc 299  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||    
T  27270578 ttgtcctcaagcaaaaaccaagggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaattgcatttttatttttcaaggctttgttctc 27270479  T
Q  300 aggatgcacttatcacaacctaaacacttttcaaggatcacatcaaccctacaacagtttcaagtgagtgtgtg 373  Q
    |||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  27270478 aggatgcacttatcacaacctaaacacttttca-----cacatcaaccctacaacagtttcaagtgagtgtgtg 27270410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 27270169 - 27270124
Alignment:
Q  328 tttcaaggatcacatcaaccctacaacagtttcaagtgagtgtgtg 373  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  27270169 tttcatggatcacatcaaccctacaacagtttcaagtgagtgtgtg 27270124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 27270314 - 27270269
Alignment:
Q  328 tttcaaggatcacatcaaccctacaacagtttcaagtgagtgtgtg 373  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  27270314 tttcatggatcacatcaaccctacaacagtttcaagtgagtgtgtg 27270269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 25175262 - 25175307
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  25175262 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaa 25175307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15735748 - 15735704
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15735748 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15735704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20595832 - 20595876
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20595832 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20595876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20602118 - 20602162
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20602118 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20602162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20608409 - 20608453
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20608409 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20608453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22317514 - 22317558
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22317514 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22317558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 25006809 - 25006853
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25006809 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 25116172 - 25116216
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25116172 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 30759656 - 30759700
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  30759656 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 30759700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 26306847 - 26306909
Alignment:
Q  163 tatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||| ||| |||||||| |||||||||||||| || |||||||||| |||| |||||||||    
T  26306847 tatttaaacagtgtattttacgtgttatcaaactacctcacacttgaaccattacttgtcctc 26306909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 22855775 - 22855734
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  22855775 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22855734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18073114 - 18073070
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  18073114 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18073070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18484213 - 18484257
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  18484213 atcaaactccccaacacttgaatctttgcttgtcctcaagcaaaa 18484257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20790715 - 20790759
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  20790715 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 20790759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 21387604 - 21387568
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21387604 atcaaactcccccacacttgaatctttgcttgtcctc 21387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23600637 - 23600681
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||    
T  23600637 atcaaattcccccacacttgaatctttgcttgtcctcaagcaaaa 23600681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 23748265 - 23748221
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  23748265 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 23748221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24219960 - 24219916
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| || |||||||||||| |||||||    
T  24219960 atcaaactcccccacacttgagtctttgcttgtcctcaagcaaaa 24219916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24940748 - 24940704
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  24940748 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 24953175 - 24953219
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  24953175 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24953219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 26847858 - 26847822
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26847858 atcaaactcccccacacttgaatctttgcttgtcctc 26847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 17412786 - 17412740
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||| ||||||||||||| ||||| || |||||||    
T  17412786 ttatcaaactcccccatacttgaatcattgtttgtcgtcaagcaaaa 17412740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 28360124 - 28360054
Alignment:
Q  122 caaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    ||||||| |||||  ||||||||||||||| ||||  ||  |||||||||| |||||||||| ||||||||    
T  28360124 caaaacaaaataattgactctaaaataaatgaaaaacaaactatttagacagtgtattttgcatgttatca 28360054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20444843 - 20444884
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| ||| |||||||| |||||||    
T  20444843 aaactcccccacacttgaatctttgattgtcctcaagcaaaa 20444884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 40 - 369
Target Start/End: Original strand, 19805470 - 19805816
Alignment:
Q  40 ctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaataaacgac 139  Q
    |||||||||||||||||||| ||||||||  ||| ||||||| ||||||||||||| ||| |||||||||||| ||||||| |||||||||||||| |||    
T  19805470 ctcttttcacctccttcttgattcttttacttttaacaccctcgttacctgaaacataacaaaatactagccagaagacatacaaaacacaataaaagac 19805569  T
Q  140 tctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaaccaag 239  Q
    |||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||    
T  19805570 tctaaa-tgaataaaaattaaactatttagacaatgtattttgcgtgttatcaaactcccccacactagaaccattgcttgtcctcaagcaaaaagcaag 19805668  T
Q  240 ggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaatt------------------gctttgttctcaggatgcacttatcacaaccta 321  Q
    ||| ||||||||||||||||||||||||||||||||||| ||| |||||                  |||||| ||||||| ||||||||||||||||||    
T  19805669 ggatgacaacaacataattcagaaaaacagaatgaactagaaatcaattgcatttttatttttcaaggctttgctctcagggtgcacttatcacaaccta 19805768  T
Q  322 aacacttttcaaggatcacatcaaccctacaacagtttcaagtgagtg 369  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  19805769 aacacttttcaaggatcacatcaaccctacaacaatttcaagtgagtg 19805816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 17334535 - 17334648
Alignment:
Q  118 catgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgc 217  Q
    |||||||||||| | ||| ||| | |||| |||||||||||||  || ||||| | || ||||||| |||||||||||||||||||||||||| |||||     
T  17334535 catgcaaaacacgacaaatgaccccaaaacaaataaaaattaagctacttagatagtgcattttgcttgttatcaaactcccccacacttgaaccattga 17334634  T
Q  218 ttgtcctcgagcaa 231  Q
    |||||||| |||||    
T  17334635 ttgtcctcaagcaa 17334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 5500266 - 5500310
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  5500266 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 5500310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 22665276 - 22665232
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22665276 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22665232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23159386 - 23159430
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  23159386 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23570643 - 23570687
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  23570643 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 23644159 - 23644115
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  23644159 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23644115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24171560 - 24171516
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  24171560 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 24171516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 25144758 - 25144802
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25144758 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25144802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 25804268 - 25804312
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25804268 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25804312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 27631710 - 27631666
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  27631710 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27631666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 27768817 - 27768861
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  27768817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27768861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 16775865 - 16775821
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  16775865 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16775821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 17590621 - 17590577
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  17590621 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 17590577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22044661 - 22044705
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  22044661 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22044705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 24795286 - 24795330
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  24795286 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25357725 - 25357681
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  25357725 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 25357681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 25370890 - 25370930
Alignment:
Q  193 aactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  25370890 aactcccccacacttgaatctttgcttgtcctcaagcaaaa 25370930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 27627795 - 27627751
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  27627795 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 27627751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 24178194 - 24178227
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtc 222  Q
    |||||||||||||||||||||||| |||||||||    
T  24178194 atcaaactcccccacacttgaatctttgcttgtc 24178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 24321380 - 24321339
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||| ||||||||| |||||||||||| |||||||    
T  24321380 aaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24321339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11616 - 11660
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||  || |||||||||||| |||||||    
T  11616 atcaaactcccccacacttgcctctttgcttgtcctcaagcaaaa 11660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 117757 - 117713
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||    
T  117757 atcaaactcccccacacttgcatatttgcttgtcctcaagcaaaa 117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23798923 - 23798967
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||    
T  23798923 atcaaactcccccacacttgaatctttgattatcctcaagcaaaa 23798967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24506864 - 24506820
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||    
T  24506864 atcaaactcccccacacttgaatcttttattgtcctcaagcaaaa 24506820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 1735670 - 1735831
Alignment:
Q  32 tcaagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaa 131  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1735670 tcaagttgctcttttcaccttcttcttgattcttttacttttgacaccctcgttacctgaaacacaacgaaatactagctagaagacatgcaaaacacaa 1735769  T
Q  132 taaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaa 193  Q
    |||| ||| | ||||||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  1735770 taaatgacccgaaaataaataaaaattaaactatttagacaacgtattttgcgtgttgtcaa 1735831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 3245589 - 3245633
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  3245589 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 3245633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 3339227 - 3339271
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  3339227 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 3339271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 4382960 - 4382916
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  4382960 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 4382916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10546937 - 10546981
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  10546937 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10602473 - 10602517
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  10602473 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10602517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 12160208 - 12160252
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  12160208 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 12776535 - 12776579
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  12776535 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 13001426 - 13001470
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  13001426 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13001470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 13136211 - 13136255
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  13136211 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13136255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 13504882 - 13504926
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  13504882 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13504926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 14348589 - 14348633
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  14348589 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14348633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15946823 - 15946779
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15946823 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15946779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20584317 - 20584273
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20584317 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20584273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 27356729 - 27356773
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  27356729 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27356773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 3279398 - 3279354
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||    
T  3279398 atcaaactcccccacacttgaatctttgtttgtcctcaagcaaaa 3279354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 7600569 - 7600525
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  7600569 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 7600525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 9360972 - 9361016
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  9360972 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 9361016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10160174 - 10160218
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  10160174 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 10160218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11398423 - 11398379
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  11398423 atcaaactcccccacacttgaatatttgcttgtcctcaagcaaaa 11398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11947621 - 11947577
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| || ||||||||| |||||||    
T  11947621 atcaaactcccccacacttgaatctttacttgtcctcaagcaaaa 11947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 12187077 - 12187121
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  12187077 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 12187121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 13187418 - 13187462
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  13187418 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 13187462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 13195459 - 13195503
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||    
T  13195459 atcaaactcccacacacttgaatctttgcttgtcctcaagcaaaa 13195503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 13601276 - 13601232
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  13601276 atcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 13601232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 14445769 - 14445813
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  14445769 atcaaactcccccacacttgaatctttgcttgtcctaaagcaaaa 14445813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 15556943 - 15556979
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15556943 atcaaactcccccacacttgaatctttgcttgtcctc 15556979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 15619284 - 15619328
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||    
T  15619284 atcaaactgccccacacttgaatctttgcttgtcctcaagcaaaa 15619328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15645215 - 15645171
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  15645215 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 15645171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16373566 - 16373610
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  16373566 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16373610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16448761 - 16448805
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  16448761 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16448805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 17388044 - 17388000
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  17388044 atcaaactcccccacacttgaatctttgcttgtccttaagcaaaa 17388000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20156516 - 20156559
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20156516 atcaaactcccccacacttgaatc-ttgcttgtcctcaagcaaaa 20156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 37942592 - 37942548
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  37942592 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 37942548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 12193489 - 12193535
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||| || |||||| |||||||||||| |||||||    
T  12193489 ttatcaaactcccccatacctgaatctttgcttgtcctcaagcaaaa 12193535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 8686388 - 8686433
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    |||||||||||||| ||||||||| |||||||||||| | ||||||    
T  8686388 atcaaactcccccatacttgaatctttgcttgtcctcaaacaaaaa 8686433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 17045902 - 17045865
Alignment:
Q  196 tcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaa 17045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 17048062 - 17048025
Alignment:
Q  196 tcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaa 17048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 2721510 - 2721467
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  2721510 atcaaactcccc-acacttgaatctttgcttgtcctcaagcaaaa 2721467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 10147225 - 10147181
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| |||||| || |||||||||||| |||||||    
T  10147225 atcaaactcccccatacttgagtctttgcttgtcctcaagcaaaa 10147181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 13068356 - 13068320
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| || |||||||||    
T  13068356 atcaaactcccccacacttgaatctttacttgtcctc 13068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 13097918 - 13097882
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  13097918 atcaaactcccccacatttgaatctttgcttgtcctc 13097882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 13898599 - 13898759
Alignment:
Q  32 tcaagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaa 131  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||| ||||||||||||| ||| |||||||||| | |||||||||| |||||||    
T  13898599 tcaagttgctcttttcaccttcttcttgattcttttacttttgacaccctcgttacctgaaacataacaaaatactagcaagaagacatgcataacacaa 13898698  T
Q  132 taaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    |||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  13898699 taaaagactctaaaatgaataaaaattaaactatttagacaatgtattttgcgtgttatca 13898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 48085717 - 48085559
Alignment:
Q  34 aagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaata 133  Q
    |||||||||||||||||||||||||| ||||||||  ||||| |||||  |||||| ||||| ||| |||||||||||| |||||||||||||||||| |    
T  48085717 aagttgctcttttcacctccttcttgattcttttacttttgaaaccctcattaccttaaacataacaaaatactagccagaagacatgcaaaacacaaga 48085618  T
Q  134 aacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    |||||| ||||||||||||||||||||  |||||| | | |||  ||||||||||||||    
T  48085617 aacgaccctaaaataaataaaaattaaactatttaaatagtgtgctttgcgtgttatca 48085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 10630964 - 10630920
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  10630964 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11496615 - 11496659
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  11496615 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11496659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 13823127 - 13823083
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  13823127 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13823083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 14653999 - 14654043
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  14653999 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14654043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15254562 - 15254518
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15254562 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15254518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 17484911 - 17484955
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  17484911 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 17484955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18081460 - 18081504
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  18081460 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18081504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 18273376 - 18273304
Alignment:
Q  120 tgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    ||||||||| |||||  |||||||||||||||  |||  ||  ||||||||||||||||||||||||||||||    
T  18273376 tgcaaaacaaaataattgactctaaaataaatggaaaacaaactatttagacaatgtattttgcgtgttatca 18273304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 38426937 - 38426893
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  38426937 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 38426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 42709732 - 42709776
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  42709732 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 42709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 56580540 - 56580584
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  56580540 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 56580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 15865701 - 15865658
Alignment:
Q  190 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15865701 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15865658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 14233316 - 14233258
Alignment:
Q  174 tgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaa 232  Q
    |||||||| | |||||||||||||||| | ||||||| |||||||||||||| ||||||    
T  14233316 tgtattttccatgttatcaaactcccctatacttgaaccattgcttgtcctcaagcaaa 14233258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 20958735 - 20958808
Alignment:
Q  120 tgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaa 193  Q
    |||||||||||||||  ||||||||||||||| |||| |||  |||||||| | || ||||||| |||||||||    
T  20958735 tgcaaaacacaataattgactctaaaataaatgaaaaataaactatttagatagtgcattttgcatgttatcaa 20958808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 3354854 - 3354810
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  3354854 atcaaactcccccacacttgaatagttgcttgtcctcaagcaaaa 3354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 10650602 - 10650558
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  10650602 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 10650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 15260110 - 15260154
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||    
T  15260110 atcaaactcccccacacttgaatctttgcttttcctcaagcaaaa 15260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15409584 - 15409540
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||    
T  15409584 atcaaactcccccacactagaatctttgcttgtcctcaagcaaaa 15409540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 16682968 - 16682924
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||||||||| || |||||||    
T  16682968 atcaaactcccccacacttgaatctttgcttgtcatcaagcaaaa 16682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 17296248 - 17296294
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||    
T  17296248 ttatcaaactcccccatgcttgaatctttgcttgtcctcaagcaaaa 17296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 18292152 - 18292118
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcc 223  Q
    |||||||||||||||||||||||| ||||||||||    
T  18292152 atcaaactcccccacacttgaatctttgcttgtcc 18292118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 9488879 - 9488923
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| |||| |||| |||||||||||| |||||||    
T  9488879 atcaaactcccccatacttcaatctttgcttgtcctcaagcaaaa 9488923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 45234233 - 45234269
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  45234233 atcaaactcccccagacttgaatctttgcttgtcctc 45234269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 27775944 - 27776095
Alignment:
Q  40 ctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaataaacgac 139  Q
    |||||||||||||||||||| ||||||||  ||| ||||||| ||||||||||||| ||| |||||||||||| ||||||| |||||||||||||| |||    
T  27775944 ctcttttcacctccttcttgattcttttacttttaacaccctcgttacctgaaacataacaaaatactagccagaagacatacaaaacacaataaaagac 27776043  T
Q  140 tctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    ||| |||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  27776044 tct-aaatgaataaaaattaaactatttagacaatgtattttgcgtgttatca 27776095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 18478219 - 18478276
Alignment:
Q  174 tgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||    
T  18478219 tgtattttgcatgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaa 18478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 17094602 - 17094646
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  17094602 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 17094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 19364243 - 19364199
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  19364243 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19364199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20237670 - 20237626
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20237670 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20237626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 27047088 - 27047044
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  27047088 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27047044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 52938622 - 52938666
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  52938622 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 52938666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 8653327 - 8653286
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  8653327 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8653286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19875648 - 19875689
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  19875648 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19875689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 14070719 - 14070675
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  14070719 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 14070675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21784473 - 21784517
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  21784473 atcaaactcccccacacttgaatatttgcttgtcctcaagcaaaa 21784517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21798663 - 21798707
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  21798663 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21798707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 16382578 - 16382620
Alignment:
Q  191 caaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||| |||||||||||| |||||||    
T  16382578 caaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16382620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 3990153 - 3990109
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||    
T  3990153 atcaaactcccccatacttgaatctttgtttgtcctcaagcaaaa 3990109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 4027894 - 4027850
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||| |||||||| |||||| ||||| |||||||    
T  4027894 atcaaactcccccacccttgaatctttgcttttcctcaagcaaaa 4027850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 8947516 - 8947552
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| || |||||||||    
T  8947516 atcaaactcccccacacttgaatctttacttgtcctc 8947552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 6426 - 6578
Alignment:
Q  40 ctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaataaacgac 139  Q
    ||||||||||||||||| ||  |||||||| ||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||    
T  6426 ctcttttcacctccttcatgactcttttatttttgacaccctcgttacctaaaacacaacgaaatactagacagaagacatgcaaaacacaataaa-gac 6524  T
Q  140 tctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaa 193  Q
     | ||||||||||||||||||  |||||| | |||||||||||| |||||||||    
T  6525 cccaaaataaataaaaattaaactatttacataatgtattttgcatgttatcaa 6578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 25752183 - 25752025
Alignment:
Q  34 aagttgctcttttcacctccttcttggttcttttatctttgacacccttgttacctgaaacacaacgaaatactagccataagacatgcaaaacacaata 133  Q
    |||||||||| ||||||||||||||| ||||||||  ||||| |||||  |||||||||||| ||| |||||||||||| |||||||||||||||||| |    
T  25752183 aagttgctctcttcacctccttcttgattcttttacttttgaaaccctcattacctgaaacataacaaaatactagccagaagacatgcaaaacacaaga 25752084  T
Q  134 aacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    |||||| ||||||||||||||||||||  |||||| | | |||  ||||||||||||||    
T  25752083 aacgaccctaaaataaataaaaattaaactatttaaatagtgtgctttgcgtgttatca 25752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 1826370 - 1826264
Alignment:
Q  118 catgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaaactcccccacacttgaatcattgc 217  Q
    ||||||| |||||||||  |||||||||| ||||  | || ||  |||||||||||||||||||| ||||||||||| ||||| |||||||||  |||||    
T  1826370 catgcaagacacaataattgactctaaaacaaatggatatcaagctatttagacaatgtattttgtgtgttatcaaagtcccctacacttgaacaattgc 1826271  T
Q  218 ttgtcct 224  Q
    |||||||    
T  1826270 ttgtcct 1826264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 19690044 - 19690117
Alignment:
Q  120 tgcaaaacacaataaacgactctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatcaa 193  Q
    ||||||||||||||| |||||||||||||||| ||||  ||  ||||||||||||||||||||| |||||||||    
T  19690044 tgcaaaacacaataatcgactctaaaataaatgaaaaacaaactatttagacaatgtattttgcatgttatcaa 19690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 538756 - 538800
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  538756 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 538800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 825838 - 825794
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  825838 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 4312771 - 4312727
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  4312771 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 4312727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 8718079 - 8718035
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  8718079 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8718035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 9583107 - 9583063
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  9583107 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 9583063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11921308 - 11921352
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  11921308 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11921352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 13658080 - 13658036
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  13658080 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13658036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 14221719 - 14221763
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  14221719 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14221763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 14551313 - 14551269
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  14551313 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15065983 - 15065939
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15065983 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15065939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 15916777 - 15916821
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15916777 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16119850 - 16119894
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  16119850 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 16119894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16465617 - 16465661
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  16465617 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 16465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18287816 - 18287772
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  18287816 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18287772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 27291551 - 27291507
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  27291551 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27291507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 15940785 - 15940731
Alignment:
Q  177 attttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||||| |||||    
T  15940785 attttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 15940731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 23515278 - 23515237
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  23515278 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23515237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 4461243 - 4461287
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  4461243 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 4461287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 5397330 - 5397286
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  5397330 atcaaactcccctacacttgaatctttgcttgtcctcaagcaaaa 5397286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 8780937 - 8780973
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8780937 atcaaactcccccacacttgaatctttgcttgtcctc 8780973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 9264940 - 9264976
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9264940 atcaaactcccccacacttgaatctttgcttgtcctc 9264976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 12548806 - 12548850
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  12548806 atcaaactccccaacacttgaatctttgcttgtcctcaagcaaaa 12548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 12567228 - 12567184
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  12567228 atcaaactcccccacacttgaatttttgcttgtcctcaagcaaaa 12567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 13674070 - 13674026
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  13674070 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 13674026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 15206585 - 15206621
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15206585 atcaaactcccccacacttgaatctttgcttgtcctc 15206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 16532310 - 16532266
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  16532310 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16532266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16633352 - 16633396
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  16633352 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18593353 - 18593397
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  18593353 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18593397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18618331 - 18618287
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  18618331 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 48801777 - 48801821
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| || ||||||||| |||||||    
T  48801777 atcaaactcccccacacttgaatcttttcttgtcctcaagcaaaa 48801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 4791381 - 4791424
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagca 230  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||    
T  4791381 ttatcaaactcccccatacttgaatctttgcttgtcctcaagca 4791424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 9004165 - 9004122
Alignment:
Q  190 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||    
T  9004165 tcaaactcccccacacttgaatctttgtttgtcctcaagcaaaa 9004122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 9194545 - 9194589
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||    
T  9194545 atcaaactcccccatacttgaatctttgtttgtcctcaagcaaaa 9194589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20108583 - 20108539
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||    
T  20108583 atcaaactcccccacacttgaatcttttattgtcctcaagcaaaa 20108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 88346 - 88403
Alignment:
Q  174 tgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||    
T  88346 tgtattttgcatgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaa 88403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 50507 - 50551
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  50507 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 50551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 77379 - 77433
Alignment:
Q  177 attttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  77379 attttacgtgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaa 77433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 123583 - 123539
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  123583 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 123539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 172318 - 172272
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  172318 ttatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 162057 - 162013
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  162057 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 162013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 164404 - 164448
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||    
T  164404 atcaaactcccccacacttgaatctttgcttatcctcaagcaaaa 164448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 31415 - 31472
Alignment:
Q  174 tgtattttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    |||||||||| |||||||||||||||| | ||||||| |||||||||||||| |||||    
T  31415 tgtattttgcatgttatcaaactcccctaaacttgaaccattgcttgtcctcaagcaa 31472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 38509 - 38554
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  38509 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaa 38554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 1317 - 1273
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  1317 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 969 - 925
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  969 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 686 - 642
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  686 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 8868 - 8824
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  8868 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 2817 - 2773
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  2817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 5294 - 5250
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  5294 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 5250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 12793 - 12749
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  12793 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15892 - 15848
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15892 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 1040 - 996
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  1040 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 42299 - 42255
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  42299 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 42255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 121161 - 121117
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  121161 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 121117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 11346954 - 11346998
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  11346954 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11346998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 19767739 - 19767695
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  19767739 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19767695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20002329 - 20002285
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20002329 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20002285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20038982 - 20039026
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20038982 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21098795 - 21098839
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  21098795 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21098839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21104116 - 21104160
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  21104116 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21104160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 21831231 - 21831187
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  21831231 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21843525 - 21843569
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  21843525 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22033556 - 22033600
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22033556 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22033600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22099656 - 22099700
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22099656 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 22370157 - 22370113
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22370157 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22370113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 19902162 - 19902216
Alignment:
Q  177 attttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||||| |||||    
T  19902162 attttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 19902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 23455153 - 23455108
Alignment:
Q  189 atcaaactccccc-acacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23455153 atcaaactccccccacacttgaatctttgcttgtcctcgagcaaaa 23455108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 8314682 - 8314638
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  8314682 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 8314638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16418621 - 16418665
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  16418621 atcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 16418665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 17620960 - 17620916
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||  |||||||||||| |||||||    
T  17620960 atcaaactcccccacacttgaatttttgcttgtcctcaagcaaaa 17620916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 21382308 - 21382264
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  21382308 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21382264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21939997 - 21940041
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  21939997 atcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 21940041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 22102607 - 22102563
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  22102607 atcaaactcccctacacttgaatctttgcttgtcctcaagcaaaa 22102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 22817805 - 22817761
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||    
T  22817805 atcaaactcccccacacttgaatctttgcttttcctcaagcaaaa 22817761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 23911654 - 23911610
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  23911654 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 23911610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 24034229 - 24034185
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||| | |||||||    
T  24034229 atcaaactcccccacacttgaatctttgcttgtccacaagcaaaa 24034185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 8322847 - 8322891
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||| || ||||||||| |||||||||||| |||||||    
T  8322847 atcaaactccctcatacttgaatctttgcttgtcctcaagcaaaa 8322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20712648 - 20712604
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||| |||||| |||| |||||||||||| |||||||    
T  20712648 atcaaactcccctacacttaaatctttgcttgtcctcaagcaaaa 20712604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 2181268 - 2181224
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  2181268 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 2181224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 15699769 - 15699725
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  15699769 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15699725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18448348 - 18448304
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  18448348 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18448304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22165550 - 22165594
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22165550 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22165594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 22244026 - 22243982
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  22244026 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22243982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 23023301 - 23023257
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  23023301 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25963456 - 25963412
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25963456 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25963412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25968103 - 25968059
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25968103 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25968059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 30671808 - 30671852
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  30671808 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 30671852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20107784 - 20107825
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  20107784 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 29595903 - 29595858
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||    
T  29595903 atcaaactccctcacacttgaatctttgcttgtcctcaagcaaaaa 29595858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18184875 - 18184919
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  18184875 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18184919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20170457 - 20170413
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  20170457 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 20170413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21560555 - 21560599
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  21560555 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21560599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22061504 - 22061548
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  22061504 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22061548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 22767117 - 22767161
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  22767117 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22767161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 24855246 - 24855290
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  24855246 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 25631270 - 25631306
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25631270 atcaaactcccccacacttgaatctttgcttgtcctc 25631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 35271027 - 35270983
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  35271027 atcaaacacccccacacttgaatctttgcttgtcctcaagcaaaa 35270983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 7435216 - 7435270
Alignment:
Q  138 actctaaaataaataaaaattaatttatttagacaatgtattttgcgtgttatca 192  Q
    ||||||||||||||| ||| |||  ||||||||||||||| ||||| ||||||||    
T  7435216 actctaaaataaatagaaaataaactatttagacaatgtagtttgcatgttatca 7435270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11204059 - 11204015
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||| |||  |||||||||||| |||||||    
T  11204059 atcaaactcccccacacttaaatatttgcttgtcctcaagcaaaa 11204015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18731930 - 18731886
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||| ||||||||||||| | |||||||||| |||||||    
T  18731930 atcaaactcctccacacttgaatcttagcttgtcctcaagcaaaa 18731886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18854225 - 18854181
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| || ||||||||| |||||||    
T  18854225 atcaaactcccccatacttgaatcttttcttgtcctcaagcaaaa 18854181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25625898 - 25625854
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||  |||||||||||| |||||||    
T  25625898 atcaaactcccccatacttgaatttttgcttgtcctcaagcaaaa 25625854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 22817 - 22774
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaa 232  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  22817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 22774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 22159 - 22200
Alignment:
Q  192 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  22159 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 616 - 661
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||    
T  616 atcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 18262 - 18217
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 234  Q
    |||||||||||||||||||||||| |||||||||||| || |||||    
T  18262 atcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaa 18217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 8148 - 8104
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||||||||| || |||||||    
T  8148 atcaaactcccccacacttgaatctttgcttgtcttcaagcaaaa 8104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 2288 - 2332
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  2288 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 2332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10207 - 10251
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  10207 atcaaactcccccaaacttgaatctttgcttgtcctcaagcaaaa 10251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 3523 - 3479
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  3523 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 3479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 1252 - 1208
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||||    
T  1252 atcaaactcccccatacttgaatctttgcttttcctcaagcaaaa 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 10775 - 10731
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||    
T  10775 atcaaactcccccacactttaatctttgcttgtcctcaagcaaaa 10731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 35105 - 35149
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| || ||||||||| |||||||    
T  35105 atcaaactcccccacacttgaatctttccttgtcctcaagcaaaa 35149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 37744 - 37788
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||    
T  37744 atcaaattcccccacacttgaatctttgcttgtcctcaagcaaaa 37788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 427 - 383
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  427 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 54850 - 54894
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||    
T  54850 atcaaactcccccacgcttgaatctttgcttgtcctcaagcaaaa 54894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 58629 - 58665
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||||||||||||| ||||||||||||    
T  58629 atcaaactcccccacacttgaatctttgcttgtcctc 58665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 97727 - 97771
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  97727 atcaaactcccccacacttgaatctttgcttgtcctaaagcaaaa 97771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11263 - 11219
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||    
T  11263 atcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 12609 - 12574
Alignment:
Q  190 tcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12609 tcaaactcccccacacttgaatctttgcttgtcctc 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 232789 - 232824
Alignment:
Q  190 tcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    ||||||||||||||||||||||| ||||||||||||    
T  232789 tcaaactcccccacacttgaatctttgcttgtcctc 232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 251871 - 251914
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaa 232  Q
    |||||||||||||||||||||||| || ||||||||| ||||||    
T  251871 atcaaactcccccacacttgaatctttacttgtcctcaagcaaa 251914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 3305 - 3251
Alignment:
Q  177 attttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcgagcaa 231  Q
    ||||| ||||||| |||||||||| ||||||||| | |||||||||||| |||||    
T  3305 attttacgtgttaacaaactcccctacacttgaaccgttgcttgtcctcaagcaa 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 1250 - 1204
Alignment:
Q  187 ttatcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||||    
T  1250 ttatcaaactcccccatacttgaatctttgcttgtccacaagcaaaa 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 1901 - 1857
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| ||| |||| ||| |||||||    
T  1901 atcaaactcccccacacttgaatctttgattgttctcaagcaaaa 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 2853 - 2897
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||| || ||||||||| |||||||||||| |||||||    
T  2853 atcaaactcccacatacttgaatctttgcttgtcctcaagcaaaa 2897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 511 - 555
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||| ||||||||| ||| |||||||| |||||||    
T  511 atcaaactcccccatacttgaatctttgtttgtcctcaagcaaaa 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 14663 - 14699
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  14663 atcaaactcccccatacttgaatctttgcttgtcctc 14699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 13003 - 13039
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctc 225  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  13003 atcaaactccgccacacttgaatctttgcttgtcctc 13039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 45229 - 45273
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    ||||||||||||||||| |||||| |||||||| ||| |||||||    
T  45229 atcaaactcccccacacctgaatctttgcttgttctcaagcaaaa 45273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 72573 - 72617
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| || ||| ||||| |||||||    
T  72573 atcaaactcccccacacttgaatctttacttttcctcaagcaaaa 72617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 84763 - 84807
Alignment:
Q  189 atcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 233  Q
    |||||||||||||||||||||||| || ||| ||||| |||||||    
T  84763 atcaaactcccccacacttgaatctttacttttcctcaagcaaaa 84807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University