View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7863_low_52 (Length: 382)
Name: NF7863_low_52
Description: NF7863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7863_low_52 |
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Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 7704718 - 7705083
Alignment:
| Q |
1 |
tgttatgtttcaattttcattgggtagaaagaaaccagcagctttctaaattgttgtttttatcctgtgtctgaaaggtgtttttaaagtgagtttgttg |
100 |
Q |
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| T |
7704718 |
tgttatgtttcaatttttattgggtagaaagaaaccagcagctttctaaattgttgtttttatcctgtgtctgaaaggtgtttttaaagtgagtttgttg |
7704817 |
T |
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| Q |
101 |
ttatcaagatcttccgtttgactccctttttcgtcttaagacatgaatagagtttaattcattaatgtaatgggatgggtacgttgaattgttgatttaa |
200 |
Q |
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| T |
7704818 |
ttatcaagatcttccgtttgactcactttttcgtcttaagacatgaatagagtttaattcattaatgtaatgggatgggtacgttgaattgttgatttaa |
7704917 |
T |
|
| Q |
201 |
ttacggatgtctcatgatcactaagtatcctacgacgatattgttacgaattaggttttgttcattctattcccctgttcaaaggttttagtttcctttc |
300 |
Q |
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| T |
7704918 |
ttagggatgtctcatgatccctaagtatcctacgacgatattgttacgaattaggttttgttcattctattcccctgttcaaaggttttagtttcctttc |
7705017 |
T |
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| Q |
301 |
attctatttcatctgaattcgatgatgaattcttttttgaaattttgcttatctatagttactttg |
366 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7705018 |
attctatttcatctgaattcgatgatgaattcttttttgaaattttgcttatctatagttactttg |
7705083 |
T |
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