View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7864_high_3 (Length: 212)
Name: NF7864_high_3
Description: NF7864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7864_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 26685297 - 26685123
Alignment:
| Q |
14 |
aatatcatcaatccaaaaagccaacactgaataaacacagtacacacaataacaacaacagtagcatctgtagcaacaaaatatctaagtccacaacaca |
113 |
Q |
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| T |
26685297 |
aatatcatcaatccaaaaagccaacactgaataaacacagtacacacagtaacaacaacattagcatctgtagcaacaaaatatctaagtccacaacaca |
26685198 |
T |
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| Q |
114 |
cgtgacaaagacagaacgaacccaacgtaagtgcaacgaaacaacacaatcaatgtcggcgctcttatttcacag |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26685197 |
cgtgacaaagacagaacgaacccaacgtaagtgcaacgaaacaacacaatcaatgtcggcgctcttatttcacag |
26685123 |
T |
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