View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7865_high_12 (Length: 250)
Name: NF7865_high_12
Description: NF7865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7865_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 32312019 - 32311892
Alignment:
| Q |
105 |
atgtagggttgagtggttatataggtggaggaagttatggaagactagatctcaaccgttggatgtcagattttgaaagaggaagaataaagcgcgcaaa |
204 |
Q |
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| T |
32312019 |
atgtagggttgagtggttatataggtggaggaagttatggaagactagatctcaaccgttggatgtcagattttgaaagaggaagaataaagcgcgcaaa |
32311920 |
T |
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| Q |
205 |
taggagggagtgatgtatatataatttt |
232 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32311919 |
taggagggagtgatgtatatataatttt |
32311892 |
T |
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