View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7865_low_11 (Length: 355)
Name: NF7865_low_11
Description: NF7865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7865_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 149 - 338
Target Start/End: Original strand, 50651352 - 50651541
Alignment:
| Q |
149 |
ataatatttggcattgattgagaagataattctgtcaaatcccagctcaatactccacaaaaatgcatctaacaaagcttttgcttctcccattcggact |
248 |
Q |
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| T |
50651352 |
ataatatttggcattgattgagaagataattctgtcaaatcccagctcaatactccacaaaaatgcatctaacaaagcttttgcttctcccattcggact |
50651451 |
T |
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| Q |
249 |
gacatcaaaggttccaaccatagagtgttcactccgacaaacaaatcatctcgtccctaatacatattccaataccaactcattatgatg |
338 |
Q |
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| T |
50651452 |
gacatcaaaggttccagccatagagtgttcactccgacaaacaaatcatctcgtccctaatacatattccaataccaactcattatgatg |
50651541 |
T |
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