View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7865_low_7 (Length: 480)

Name: NF7865_low_7
Description: NF7865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7865_low_7
NF7865_low_7
[»] scaffold0185 (2 HSPs)
scaffold0185 (212-460)||(3750-3999)
scaffold0185 (18-130)||(3556-3668)
[»] scaffold0048 (2 HSPs)
scaffold0048 (18-123)||(62127-62232)
scaffold0048 (235-330)||(62344-62440)
[»] chr5 (38 HSPs)
chr5 (333-460)||(23979149-23979277)
chr5 (333-462)||(14143904-14144033)
chr5 (333-460)||(6817125-6817252)
chr5 (328-460)||(24074300-24074433)
chr5 (336-460)||(7125923-7126047)
chr5 (333-445)||(17762285-17762397)
chr5 (344-459)||(22571090-22571206)
chr5 (327-460)||(14411693-14411827)
chr5 (327-459)||(14144150-14144283)
chr5 (396-460)||(20709278-20709342)
chr5 (333-454)||(24837171-24837293)
chr5 (333-451)||(41001610-41001728)
chr5 (333-454)||(30512290-30512411)
chr5 (333-454)||(30552630-30552751)
chr5 (333-454)||(4918991-4919114)
chr5 (333-451)||(24837426-24837545)
chr5 (327-460)||(7126165-7126299)
chr5 (333-454)||(31799642-31799764)
chr5 (326-454)||(17762536-17762665)
chr5 (333-457)||(18336707-18336831)
chr5 (326-454)||(14411920-14412048)
chr5 (336-460)||(27158996-27159120)
chr5 (349-457)||(41001374-41001480)
chr5 (333-459)||(993995-994121)
chr5 (335-460)||(29444810-29444936)
chr5 (333-451)||(18336469-18336589)
chr5 (333-460)||(24650704-24650830)
chr5 (396-462)||(29445052-29445118)
chr5 (333-454)||(993752-993871)
chr5 (396-460)||(24074550-24074614)
chr5 (336-444)||(27159221-27159327)
chr5 (397-451)||(6817378-6817432)
chr5 (333-383)||(24651025-24651075)
chr5 (398-460)||(41424584-41424646)
chr5 (412-449)||(4919145-4919182)
chr5 (412-449)||(7126072-7126109)
chr5 (413-449)||(14144088-14144124)
chr5 (335-383)||(31799965-31800013)
[»] chr2 (40 HSPs)
chr2 (333-460)||(23806200-23806328)
chr2 (333-460)||(17850589-17850716)
chr2 (336-451)||(19251476-19251591)
chr2 (320-460)||(15106315-15106454)
chr2 (325-460)||(19251718-19251853)
chr2 (333-454)||(26236349-26236470)
chr2 (333-460)||(42670967-42671095)
chr2 (325-460)||(26560550-26560684)
chr2 (333-460)||(17850834-17850962)
chr2 (333-457)||(17463342-17463467)
chr2 (326-462)||(20498742-20498877)
chr2 (336-439)||(23854693-23854797)
chr2 (342-451)||(26135828-26135938)
chr2 (333-460)||(39878105-39878232)
chr2 (315-462)||(34548558-34548705)
chr2 (333-460)||(15106069-15106197)
chr2 (396-460)||(22263257-22263321)
chr2 (333-460)||(22263439-22263569)
chr2 (335-454)||(30390463-30390583)
chr2 (397-460)||(23854914-23854977)
chr2 (333-384)||(26560880-26560931)
chr2 (336-387)||(30958689-30958740)
chr2 (412-454)||(13254690-13254732)
chr2 (396-454)||(20498999-20499057)
chr2 (328-460)||(26236124-26236257)
chr2 (343-387)||(13284735-13284779)
chr2 (407-454)||(13284485-13284532)
chr2 (336-387)||(42670722-42670773)
chr2 (326-451)||(13254492-13254618)
chr2 (333-451)||(17463094-17463212)
chr2 (333-383)||(26136143-26136193)
chr2 (413-459)||(33290298-33290344)
chr2 (336-385)||(12419046-12419095)
chr2 (336-385)||(12431106-12431155)
chr2 (334-387)||(13254758-13254811)
chr2 (412-449)||(22263346-22263383)
chr2 (412-449)||(23854821-23854858)
chr2 (333-370)||(23855033-23855070)
chr2 (399-460)||(42670788-42670849)
chr2 (397-434)||(44098896-44098933)
[»] scaffold0809 (2 HSPs)
scaffold0809 (322-460)||(1402-1540)
scaffold0809 (333-446)||(1672-1782)
[»] chr8 (31 HSPs)
chr8 (339-460)||(42112993-42113114)
chr8 (333-454)||(43851667-43851788)
chr8 (342-454)||(30789519-30789631)
chr8 (333-451)||(14820297-14820415)
chr8 (336-460)||(10108618-10108743)
chr8 (333-460)||(10108372-10108500)
chr8 (336-460)||(21147941-21148067)
chr8 (339-460)||(5555117-5555239)
chr8 (336-460)||(14820542-14820667)
chr8 (333-460)||(7689771-7689899)
chr8 (333-460)||(30789755-30789883)
chr8 (333-460)||(17622892-17623017)
chr8 (326-444)||(5554864-5554983)
chr8 (333-460)||(42113232-42113357)
chr8 (327-460)||(10171391-10171525)
chr8 (334-460)||(17623135-17623261)
chr8 (327-451)||(7689520-7689644)
chr8 (333-387)||(14767826-14767880)
chr8 (325-383)||(20875692-20875750)
chr8 (396-454)||(22494638-22494696)
chr8 (333-454)||(26136939-26137060)
chr8 (396-460)||(26532849-26532913)
chr8 (333-383)||(18044153-18044203)
chr8 (333-442)||(42606019-42606129)
chr8 (333-381)||(2583322-2583370)
chr8 (396-460)||(14767573-14767637)
chr8 (333-460)||(21148184-21148312)
chr8 (327-387)||(35367406-35367466)
chr8 (333-441)||(43481581-43481691)
chr8 (412-449)||(10108556-10108593)
chr8 (336-385)||(20877069-20877118)
[»] chr6 (27 HSPs)
chr6 (333-454)||(18500317-18500438)
chr6 (333-460)||(32017752-32017879)
chr6 (333-460)||(9481184-9481312)
chr6 (333-454)||(24732192-24732313)
chr6 (334-387)||(26385596-26385649)
chr6 (397-460)||(9854135-9854198)
chr6 (397-460)||(14680949-14681012)
chr6 (396-459)||(19284195-19284258)
chr6 (397-451)||(17142744-17142798)
chr6 (333-383)||(18500655-18500705)
chr6 (333-387)||(24731937-24731991)
chr6 (333-454)||(26385280-26385402)
chr6 (334-460)||(30458903-30459031)
chr6 (335-460)||(10321737-10321860)
chr6 (396-454)||(33714553-33714611)
chr6 (396-460)||(9481430-9481494)
chr6 (325-387)||(2299635-2299697)
chr6 (336-432)||(9154884-9154982)
chr6 (333-383)||(30617969-30618019)
chr6 (341-387)||(32017550-32017596)
chr6 (333-366)||(3229962-3229995)
chr6 (397-434)||(15942410-15942447)
chr6 (412-449)||(30618147-30618184)
chr6 (412-449)||(32017691-32017728)
chr6 (408-449)||(33714642-33714683)
chr6 (399-451)||(24732007-24732059)
chr6 (397-445)||(30618029-30618077)
[»] scaffold0361 (2 HSPs)
scaffold0361 (326-454)||(4817-4945)
scaffold0361 (333-387)||(4564-4618)
[»] chr7 (38 HSPs)
chr7 (328-454)||(23704915-23705041)
chr7 (325-454)||(12006535-12006664)
chr7 (333-460)||(41600206-41600334)
chr7 (333-460)||(28218180-28218309)
chr7 (333-454)||(10409628-10409749)
chr7 (333-454)||(25772366-25772487)
chr7 (333-460)||(16995202-16995329)
chr7 (333-451)||(28218420-28218539)
chr7 (328-460)||(12006788-12006921)
chr7 (325-454)||(20458686-20458815)
chr7 (333-454)||(38879725-38879848)
chr7 (333-459)||(38879973-38880097)
chr7 (333-451)||(48672536-48672655)
chr7 (333-454)||(20419538-20419660)
chr7 (333-451)||(23704664-23704782)
chr7 (333-451)||(20419793-20419913)
chr7 (333-442)||(20963760-20963869)
chr7 (333-454)||(48648264-48648385)
chr7 (328-460)||(48672274-48672409)
chr7 (333-460)||(6465857-6465984)
chr7 (334-460)||(7657972-7658101)
chr7 (333-451)||(23383757-23383876)
chr7 (332-451)||(48648486-48648604)
chr7 (333-454)||(44816833-44816959)
chr7 (333-387)||(7658287-7658341)
chr7 (333-383)||(24195198-24195248)
chr7 (333-460)||(33162783-33162912)
chr7 (333-454)||(41599960-41600082)
chr7 (396-445)||(20458954-20459003)
chr7 (396-460)||(1250454-1250518)
chr7 (396-448)||(24195056-24195108)
chr7 (328-451)||(25772588-25772712)
chr7 (333-460)||(31851243-31851369)
chr7 (333-387)||(6466127-6466181)
chr7 (336-382)||(31852157-31852203)
chr7 (396-448)||(20963561-20963613)
chr7 (413-449)||(20963650-20963686)
chr7 (399-451)||(31851496-31851548)
[»] chr3 (50 HSPs)
chr3 (320-457)||(16722242-16722380)
chr3 (336-460)||(14162119-14162243)
chr3 (333-460)||(4204711-4204838)
chr3 (326-460)||(43572639-43572773)
chr3 (333-460)||(5800607-5800735)
chr3 (333-448)||(9266977-9267093)
chr3 (333-460)||(14171589-14171716)
chr3 (325-460)||(14171834-14171970)
chr3 (336-460)||(30500048-30500171)
chr3 (333-460)||(30500289-30500416)
chr3 (322-460)||(52552681-52552822)
chr3 (325-451)||(9267232-9267358)
chr3 (325-454)||(35995672-35995802)
chr3 (326-454)||(21633150-21633279)
chr3 (327-451)||(43572385-43572510)
chr3 (333-460)||(14262284-14262412)
chr3 (333-454)||(20853697-20853820)
chr3 (333-460)||(33372653-33372780)
chr3 (333-454)||(49986782-49986904)
chr3 (317-451)||(20853953-20854086)
chr3 (328-454)||(45003750-45003876)
chr3 (396-460)||(14161937-14162001)
chr3 (333-454)||(19112766-19112889)
chr3 (325-460)||(33372400-33372536)
chr3 (333-454)||(45970169-45970292)
chr3 (396-460)||(52552936-52553000)
chr3 (336-387)||(27946114-27946165)
chr3 (333-444)||(35995942-35996051)
chr3 (333-451)||(45969917-45970036)
chr3 (333-387)||(15328465-15328519)
chr3 (333-444)||(16721993-16722105)
chr3 (336-454)||(5800859-5800977)
chr3 (333-451)||(11003734-11003853)
chr3 (336-454)||(14262041-14262160)
chr3 (333-451)||(19113022-19113141)
chr3 (343-446)||(36990922-36991025)
chr3 (343-446)||(37016362-37016465)
chr3 (333-451)||(45003498-45003617)
chr3 (327-451)||(49986523-49986649)
chr3 (333-387)||(19720335-19720389)
chr3 (333-387)||(27946187-27946241)
chr3 (326-387)||(17465362-17465423)
chr3 (396-457)||(45058742-45058803)
chr3 (396-460)||(15328708-15328772)
chr3 (343-446)||(35740829-35740931)
chr3 (333-371)||(21632903-21632941)
chr3 (398-460)||(32998382-32998444)
chr3 (412-449)||(14262191-14262228)
chr3 (336-384)||(3425973-3426021)
chr3 (413-449)||(38283737-38283773)
[»] chr4 (52 HSPs)
chr4 (333-454)||(31090062-31090185)
chr4 (333-460)||(38573971-38574098)
chr4 (326-448)||(9396959-9397081)
chr4 (333-462)||(3273866-3273994)
chr4 (334-460)||(9396702-9396829)
chr4 (333-444)||(13132205-13132315)
chr4 (334-460)||(35376376-35376502)
chr4 (331-448)||(48260011-48260128)
chr4 (328-451)||(9618977-9619101)
chr4 (333-460)||(35376165-35376292)
chr4 (333-454)||(9619233-9619355)
chr4 (333-454)||(34063984-34064106)
chr4 (334-460)||(3018014-3018142)
chr4 (336-460)||(4356129-4356253)
chr4 (339-451)||(15640724-15640836)
chr4 (396-460)||(15640963-15641027)
chr4 (333-451)||(9516867-9516986)
chr4 (333-451)||(31090318-31090437)
chr4 (333-454)||(9516612-9516734)
chr4 (334-451)||(38574225-38574343)
chr4 (334-460)||(13131943-13132071)
chr4 (333-454)||(46046432-46046548)
chr4 (336-460)||(3018260-3018383)
chr4 (333-460)||(46046672-46046799)
chr4 (336-451)||(4355887-4356002)
chr4 (333-460)||(37012955-37013082)
chr4 (328-451)||(3273618-3273743)
chr4 (333-387)||(31218303-31218357)
chr4 (333-454)||(12904749-12904870)
chr4 (336-460)||(18713208-18713335)
chr4 (333-448)||(26252497-26252613)
chr4 (396-444)||(34064246-34064294)
chr4 (396-460)||(37012773-37012837)
chr4 (327-451)||(31943946-31944071)
chr4 (336-387)||(36887685-36887736)
chr4 (333-383)||(41947180-41947230)
chr4 (349-387)||(43312227-43312265)
chr4 (333-386)||(41946967-41947020)
chr4 (336-460)||(48579871-48579996)
chr4 (400-460)||(7819262-7819322)
chr4 (399-451)||(26252337-26252389)
chr4 (336-460)||(36888928-36889051)
chr4 (396-451)||(7819080-7819135)
chr4 (333-459)||(31944199-31944326)
chr4 (396-451)||(48580123-48580178)
chr4 (336-378)||(46935170-46935212)
chr4 (333-387)||(48259825-48259879)
chr4 (341-387)||(51029095-51029141)
chr4 (408-449)||(38574123-38574164)
chr4 (413-449)||(4356068-4356104)
chr4 (396-460)||(18713026-18713090)
chr4 (413-449)||(37012862-37012898)
[»] chr1 (39 HSPs)
chr1 (336-460)||(20995916-20996040)
chr1 (333-451)||(18462288-18462406)
chr1 (333-451)||(24467631-24467749)
chr1 (333-460)||(52058256-52058384)
chr1 (333-454)||(39826052-39826174)
chr1 (400-459)||(7473862-7473921)
chr1 (334-460)||(17606307-17606438)
chr1 (336-460)||(17606556-17606679)
chr1 (396-462)||(24467873-24467939)
chr1 (333-451)||(29696567-29696685)
chr1 (333-454)||(30299485-30299607)
chr1 (333-454)||(39711326-39711448)
chr1 (333-442)||(39826312-39826422)
chr1 (333-454)||(34749140-34749261)
chr1 (333-460)||(4906964-4907092)
chr1 (396-460)||(8293055-8293119)
chr1 (333-451)||(30299234-30299352)
chr1 (343-454)||(42510027-42510138)
chr1 (333-460)||(39970647-39970776)
chr1 (396-454)||(52058077-52058135)
chr1 (335-459)||(18462533-18462658)
chr1 (327-454)||(33628686-33628814)
chr1 (333-445)||(39711076-39711187)
chr1 (325-460)||(48072209-48072345)
chr1 (354-460)||(16294195-16294302)
chr1 (336-387)||(33629012-33629063)
chr1 (396-462)||(4907208-4907274)
chr1 (333-387)||(18342339-18342393)
chr1 (333-445)||(34749368-34749481)
chr1 (329-460)||(43539345-43539477)
chr1 (333-387)||(39970968-39971022)
chr1 (333-454)||(29696812-29696933)
chr1 (333-460)||(8292806-8292934)
chr1 (336-387)||(43539669-43539720)
chr1 (327-381)||(16294045-16294099)
chr1 (333-387)||(20995700-20995754)
chr1 (333-382)||(13230059-13230108)
chr1 (412-449)||(17606494-17606531)
chr1 (412-452)||(42510166-42510206)
[»] scaffold0141 (2 HSPs)
scaffold0141 (325-384)||(8319-8378)
scaffold0141 (396-460)||(8570-8634)
[»] scaffold0477 (2 HSPs)
scaffold0477 (326-383)||(4875-4932)
scaffold0477 (397-454)||(5002-5059)
[»] scaffold0117 (1 HSPs)
scaffold0117 (336-460)||(12230-12355)
[»] scaffold0352 (2 HSPs)
scaffold0352 (333-387)||(6001-6055)
scaffold0352 (328-385)||(4664-4721)
[»] scaffold0449 (2 HSPs)
scaffold0449 (333-441)||(7466-7576)
scaffold0449 (396-454)||(7292-7350)
[»] scaffold0176 (1 HSPs)
scaffold0176 (327-387)||(15950-16010)


Alignment Details
Target: scaffold0185 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 212 - 460
Target Start/End: Original strand, 3750 - 3999
Alignment:
Q  212 ggacaaatggatcctannnnnnnagttatagaaaatcatttgaagtaatttttaggtactgttatttaaaacgtgtaataaatggatgaaaacttcaaaa 311  Q
    ||||||||||||||||       |||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  3750 ggacaaatggatcctatttttttagttatagaaaatcatttgaagtagtttttacataccgttatttaaaacgtgtaataaatggatgaaaacttcaaaa 3849  T
Q  312 attattatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtc 410  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||||||||    
T  3850 attattatatttgtttttagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtc 3949  T
Q  411 tctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3950 cctgtaatttcaaattcttccactgttggtcgctcatttcaccatgtcag 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 3556 - 3668
Alignment:
Q  18 aagaggactaaccaaagtaagtaaccatcatagagaggataagccacatagagaaaccaacatagagacgaacaactaaagaggaaataacaatcaaaga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3556 aagaggactaaccaaagtaagtaaccatcatagagaggataagccacatagagaaaccaacatagagacgaacaactaaagaggaattaacaatcaaaga 3655  T
Q  118 gatgaaccatcat 130  Q
    |||||||||||||    
T  3656 gatgaaccatcat 3668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 62127 - 62232
Alignment:
Q  18 aagaggactaaccaaagtaagtaaccatcatagagaggataagccacatagagaaaccaacatagagacgaacaactaaagaggaaataacaatcaaaga 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||| |||||||||  ||||||| ||||    
T  62127 aagaggactaaccaaagtaagtaaccatcataaagaggataagccacatagagaaacaaacataaagacgagcaaccaaagaggaagcaacaatcgaaga 62226  T
Q  118 gatgaa 123  Q
    ||||||    
T  62227 gatgaa 62232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 62344 - 62440
Alignment:
Q  235 agttatagaaaatcatttgaagtaatttttaggtactg-ttatttaaaacgtgtaataaatggatgaaaacttcaaaaattattatatttgttttta 330  Q
    |||||||||||||||||||||||| ||||||| || || ||||| | || |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  62344 agttatagaaaatcatttgaagtagtttttagatattgattattaataatgtgtaacaaatggatgaaaagttcaaaaattattatatttgttttta 62440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 23979277 - 23979149
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||||||||||||    
T  23979277 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttcc 23979178  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||||||||||||||| |||||    
T  23979177 acttttggtccctcatttcaccacgtcag 23979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 462
Target Start/End: Original strand, 14143904 - 14144033
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  14143904 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 14144003  T
Q  433 ctgttggtccctcatttcaccatgtcagta 462  Q
    || ||||| |||||||||| || |||||||    
T  14144004 cttttggtacctcatttcatcacgtcagta 14144033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 6817125 - 6817252
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||| |||||||||||  |||| || |||||||||||||        |||||||||||||||  |||||||||| |||||||||    
T  6817125 gtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttcca 6817224  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||||||||||||||||||| |||||    
T  6817225 cttttggtccctcatttcaccacgtcag 6817252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 460
Target Start/End: Original strand, 24074300 - 24074433
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaatt 426  Q
    |||| ||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||          ||||||||| |||||||||||||||| |||    
T  24074300 ttagggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatatt 24074399  T
Q  427 cttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||| |||||||||| ||||| || |||||    
T  24074400 cttccacttttggtccctcctttcatcacgtcag 24074433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 7125923 - 7126047
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||| || |||||||||||||| |||| ||||||||||||||||        |||||||||| |||| || |||||||| |||||||||||     
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccactt 7126022  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  7126023 ttggtcccttattccaccacgtcag 7126047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 17762285 - 17762397
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||        |||||| ||| |||  ||||||||||| |||||||||    
T  17762285 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttcca 17762384  T
Q  433 ctgttggtccctc 445  Q
    || ||||||||||    
T  17762385 cttttggtccctc 17762397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 22571090 - 22571206
Alignment:
Q  344 tttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnnga-tttagattatgtctctgtaatttcaaattcttccactgttggtcc 442  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||         | |||||||||| |||||||||||||| ||||||||||| |||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  443 ctcatttcaccatgtca 459  Q
    |||||||||||| ||||    
T  22571190 ctcatttcaccacgtca 22571206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 460
Target Start/End: Original strand, 14411693 - 14411827
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||| ||| ||||| |||||||||| ||    
T  14411693 tttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagat 14411792  T
Q  426 tcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| |||||||||| ||||| || |||||    
T  14411793 tcttccacttttggtccctcctttcatcacgtcag 14411827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 459
Target Start/End: Complemental strand, 14144283 - 14144150
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaat 425  Q
    ||||| || |||||||||||| ||| ||||||||||| | |||| ||||||||||||||||         |||||||||| |||| ||||||||||||||    
T  14144283 tttagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaat 14144184  T
Q  426 tcttccactgttggtccctcatttcaccatgtca 459  Q
    ||||||||| ||||||||| ||| ||||| ||||    
T  14144183 tcttccacttttggtcccttattccaccacgtca 14144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 20709278 - 20709342
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcag 20709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 24837171 - 24837293
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||||||||| |||| |||| || |||||||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  24837171 gtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcc 24837270  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  24837271 acttttggtccctcattccacca 24837293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 41001728 - 41001610
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||| |||| ||||||||||||||||| |||| || ||||||||| |||        |||||||||| |||| || |||||||| |||||||||    
T  41001728 gtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagattcttcca 41001629  T
Q  433 ctgttggtccctcatttca 451  Q
    || |||||||||| |||||    
T  41001628 cttttggtccctcctttca 41001610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 30512290 - 30512411
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| ||||||| ||||||||||||||||  ||||| | |||||||||||||        ||||||||||  ||| ||||||||||| ||| |||||    
T  30512290 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30512389  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  30512390 cttttggtccctcattccacca 30512411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 30552630 - 30552751
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| ||||||| ||||||||||||||||  ||||| | |||||||||||||        ||||||||||  ||| ||||||||||| ||| |||||    
T  30552630 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30552729  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  30552730 cttttggtccctcattccacca 30552751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 4918991 - 4919114
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    |||||||||||||||  || ||||||||||||| ||||||| ||||||| |||||          |||||||||| |||| ||||||||||| |||||||    
T  4918991 gtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 4919090  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||||||| |||||    
T  4919091 cacttttggtccctcattccacca 4919114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 24837545 - 24837426
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||         |||||||||| |||| |||||||||||||||||||     
T  24837545 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttct 24837446  T
Q  432 actgttggtccctcatttca 451  Q
    ||| ||| |||||| |||||    
T  24837445 acttttgctccctcctttca 24837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 460
Target Start/End: Complemental strand, 7126299 - 7126165
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaat 425  Q
    ||||| |||||||||||||||  |||||||||||||||| |||| || ||||||||  |||         |||||||||| |||| ||||||||||| ||    
T  7126299 tttagggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatat 7126200  T
Q  426 tcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| |||||||||| ||||| || |||||    
T  7126199 tcttccacttttggtccctcctttcatcacgtcag 7126165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 31799642 - 31799764
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||| |||||||||| |||| || ||| |||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  31799642 gtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 31799741  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||| ||| |||||    
T  31799742 acttttggtcccttattccacca 31799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 17762665 - 17762536
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    |||||| ||||||||||||||| ||||||||| ||||||| ||||  | |||||||||||||         |||||||||| |||| |  |||||||| |    
T  17762665 ttttagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcaga 17762566  T
Q  425 ttcttccactgttggtccctcatttcacca 454  Q
    |||||||||| ||||||||||||| |||||    
T  17762565 ttcttccacttttggtccctcattccacca 17762536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 457
Target Start/End: Complemental strand, 18336831 - 18336707
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||||||| |||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  18336831 gtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 18336733  T
Q  432 actgttggtccctcatttcaccatgt 457  Q
    ||| ||| ||||| ||| ||||||||    
T  18336732 acttttgatcccttattacaccatgt 18336707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 14412048 - 14411920
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    |||||| |||||||||||||||  || || |||||||| | ||||||| |||||||||||||         ||||||||| ||||  |||||||||| ||    
T  14412048 ttttagggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaaatttagattttgtccttgtaatttcagat 14411949  T
Q  426 tcttccactgttggtccctcatttcacca 454  Q
    ||||||||  ||||||||||||| |||||    
T  14411948 tcttccacgtttggtccctcattccacca 14411920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 27158996 - 27159120
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||| |||| |||||||||||| ||||||  |||||||| | ||        |||||| ||| |||| ||||||||||| |||||||||||     
T  27158996 aatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaagatttaaattttgtccctgtaatttcagattcttccactt 27159095  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  27159096 ttggtcccttattccaccacgtcag 27159120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 41001374 - 41001480
Alignment:
Q  349 gtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatt 448  Q
    ||||||||||||||||| ||||||| |||||||||||||         | ||||||| |||| ||||||||||| ||||||||||| ||||||| |||||    
T  41001374 gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattcttccacttttggtccttcatt 41001471  T
Q  449 tcaccatgt 457  Q
     ||||||||    
T  41001472 ccaccatgt 41001480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 994121 - 993995
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||| |||||||||| |||||| |||| ||||||| |||||||||||||         |||||||||| |||| |||||||| || ||||||||    
T  994121 gtaaatacct-tttttgtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattcttcc 994023  T
Q  432 actgttggtccctcatttcaccatgtca 459  Q
    ||| |||||||||| ||| | |||||||    
T  994022 acttttggtccctccttttatcatgtca 993995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 460
Target Start/End: Original strand, 29444810 - 29444936
Alignment:
Q  335 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttccac 433  Q
    ||||| ||||||| ||||||||||||||| | ||||  |||||||||||||||        | ||||||||||||||  |||||||||| ||||||| ||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  434 tgttggtccctcatttcaccatgtcag 460  Q
    | |||||||||| ||||| || |||||    
T  29444910 ttttggtccctcctttcatcacgtcag 29444936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 18336469 - 18336589
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||| ||||||| |||||| |||||||||| |||| ||||||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  18336469 gtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 18336568  T
Q  431 cactgttggtccctcatttca 451  Q
    | || ||| |||||| |||||    
T  18336569 cgcttttgatccctcctttca 18336589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 24650704 - 24650830
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||| | ||||||| ||||| ||  |||        |||||||||| |||  ||||||||||| |||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgt-aaaaaaagatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||  |||||| ||||| |||||    
T  24650803 cttttggtagctcattccaccacgtcag 24650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 29445118 - 29445052
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagta 462  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| |||||||    
T  29445118 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagta 29445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 993752 - 993871
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||| |||||| ||| ||||||||||||| |||| || |||||||||||||         | |||||||  |||  |||||||||| |||||||||    
T  993752 gtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa--aattagatttagtccttgtaatttcatattcttcca 993849  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  993850 cttttggtccctcattccacca 993871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 24074614 - 24074550
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| |||| |||| |||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcag 24074550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 27159327 - 27159221
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||| |||| |||||||||||| ||||||| ||||||||| |||         ||||||||| |||| ||||||||| | ||||||||| |     
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa--atttagattttgtccctgtaattttatattcttccattt 27159230  T
Q  436 ttggtccct 444  Q
    |||||||||    
T  27159229 ttggtccct 27159221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 6817432 - 6817378
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    ||||||||| |||| ||||||||||| ||||||||||| |||||| ||| |||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttca 6817378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 24651075 - 24651025
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| ||| ||||||||||||| |||| || |||||||||    
T  24651075 gtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 460
Target Start/End: Original strand, 41424584 - 41424646
Alignment:
Q  398 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||| |||| |||| |||||| ||||||||||| || ||||||||||| | ||||||||    
T  41424584 tttagattctgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcag 41424646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 4919182 - 4919145
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  4919182 ctgtaatttcaaattcctccacttttggtccctcattt 4919145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 7126109 - 7126072
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  7126109 ctgtaatttcaaattcctccacttttggtccctcattt 7126072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 14144088 - 14144124
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  14144088 tgtaatttcaaattcctccacttttggtccctcattt 14144124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 31800013 - 31799965
Alignment:
Q  335 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||| |||||| |||||||||| |||| || |||||||||    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 23806328 - 23806200
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  23806328 gtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 23806229  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||||||||| ||||| |||||    
T  23806228 acttttggtccctcattccaccacgtcag 23806200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 17850589 - 17850716
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||||| |        |||||||||| |||||||||||||| | |||||||||    
T  17850589 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaagatttagattttgtctctgtaatttaagattcttcca 17850688  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||| ||||||||| ||||| |||||    
T  17850689 cttttgatccctcattccaccacgtcag 17850716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 451
Target Start/End: Original strand, 19251476 - 19251591
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||| |||| ||||||||||| |||||||||||     
T  19251476 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccactt 19251575  T
Q  436 ttggtccctcatttca 451  Q
    |||||||||| |||||    
T  19251576 ttggtccctcctttca 19251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 320 - 460
Target Start/End: Complemental strand, 15106454 - 15106315
Alignment:
Q  320 atttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatt 419  Q
    |||| ||||| | ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||         ||||||||| |||| ||||||||    
T  15106454 attttttttttgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa-atttagattttgtccctgtaatt 15106356  T
Q  420 tcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||||||| ||| ||||||||| ||||| |||||    
T  15106355 tcagattcttccacttttgatccctcattccaccacgtcag 15106315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 19251853 - 19251718
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||||| ||||||||||||||| |||| |||||||||||  |||| || |||||||||||||        |||||||||| ||||  |||||||||| |    
T  19251853 tttttagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattctgtccttgtaatttcata 19251754  T
Q  425 ttcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| | ||||||||||||||||| |||||    
T  19251753 ttcttccactttcggtccctcatttcaccacgtcag 19251718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 26236470 - 26236349
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||         |||||||||| |||| ||||||||||| |||||||||    
T  26236470 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 26236371  T
Q  433 ctgttggtccctcatttcacca 454  Q
     | ||||||||||||| |||||    
T  26236370 tttttggtccctcattccacca 26236349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 42671095 - 42670967
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||         ||||||||||||||| ||||||||||| ||| ||||    
T  42671095 gtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatttttcc 42670996  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  42670995 acttttggtccctcctttcatcacgtcag 42670967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 26560550 - 26560684
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||||| || |||| ||||||| ||||||||||||||| | |||||||||||||||||||||        ||||||||||  ||| ||||||||||| |    
T  26560550 tttttagggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgt-aaaaaaagatttagatttagtccctgtaatttcaga 26560648  T
Q  425 ttcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| ||||||||| ||| ||||| |||||    
T  26560649 ttcttccacttttggtcccttattccaccacgtcag 26560684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 17850962 - 17850834
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||         | |||||||| |||| ||||||||||| ||||||||    
T  17850962 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattcttcc 17850863  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  17850862 acttttggtccctcttttcatcacgtcag 17850834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 457
Target Start/End: Complemental strand, 17463467 - 17463342
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| | ||||||||||||||| |||| || |||||||||||||         |||||||||| |||| |||||||| || ||||||||    
T  17463467 gtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattcttcc 17463368  T
Q  432 actgttggtccctcatttcaccatgt 457  Q
    ||| ||| ||||||||| ||||||||    
T  17463367 acttttgatccctcattccaccatgt 17463342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 462
Target Start/End: Original strand, 20498742 - 20498877
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    |||||| ||||||||||||||| |||  |||||||||||| |||| || |||||||||||||         |||||||||||||| |||| |||||| ||    
T  20498742 ttttagggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaatatttagattatgtccctgt-atttcagat 20498840  T
Q  426 tcttccactgttggtccctcatttcaccatgtcagta 462  Q
    ||||||||| |||||||||| ||| | || |||||||    
T  20498841 tcttccacttttggtccctccttttatcacgtcagta 20498877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 23854693 - 23854797
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  23854693 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 23854792  T
Q  435 gttgg 439  Q
     ||||    
T  23854793 tttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 26135828 - 26135938
Alignment:
Q  342 tctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggt 440  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| ||||||| ||| |||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  441 ccctcatttca 451  Q
    ||||| |||||    
T  26135928 ccctcctttca 26135938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 39878105 - 39878232
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||| ||||||||| |||||||||||| |||| || |||||||||||||          ||||||||||||| |||||||||||| ||||||||    
T  39878105 gtaaatacct-tttttgtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattcttcc 39878203  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||| ||| ||||| || |||||    
T  39878204 acttttggtcactcctttcatcaagtcag 39878232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 462
Target Start/End: Original strand, 34548558 - 34548705
Alignment:
Q  315 attatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctg 414  Q
    ||||| ||| ||||| | |||||||| |||||| ||||||||||||||||  ||||| | |||||||||||||        |||||||||| ||||  ||    
T  34548558 attatttttcttttttgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatg 34548657  T
Q  415 taatttcaaattcttccactgttggtccctcatttcaccatgtcagta 462  Q
    |||||||| ||| ||||||  |||||| ||| ||||| || |||||||    
T  34548658 taatttcatattgttccacctttggtcactcctttcatcacgtcagta 34548705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 15106069 - 15106197
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||| ||||||||||| ||||||| ||||| |||||||         |||||||||| |||| ||||||||| | ||| ||||    
T  15106069 gtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattattcc 15106168  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  15106169 acttttggtccctcctttcatcacgtcag 15106197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 22263257 - 22263321
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||| ||| ||||| |||||    
T  22263257 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcag 22263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 22263569 - 22263439
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaattctt 429  Q
    ||||||||||||||| || |||||||||||||| |||| || |||||||| ||||           |||| ||||| |||| ||||||||||| ||||||    
T  22263569 gtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattctt 22263470  T
Q  430 ccactgttggtccctcatttcaccatgtcag 460  Q
    ||||| |||||||||| ||||| || |||||    
T  22263469 ccacttttggtccctcctttcatcacgtcag 22263439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 454
Target Start/End: Original strand, 30390463 - 30390583
Alignment:
Q  335 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngat-ttagattatgtctctgtaatttcaaattcttccac 433  Q
    ||||| ||||||| |||| |||||||||||| |||| |||||||| |||||||         |  ||||||| |||| ||||||||||| ||||||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  434 tgttggtccctcatttcacca 454  Q
    | ||||||||||||| |||||    
T  30390563 ttttggtccctcattccacca 30390583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 23854977 - 23854914
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| |||||||||||||| | ||||||||||| |||||||||| ||||| || |||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcag 23854914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 26560931 - 26560880
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 384  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||||||||    
T  26560931 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 30958689 - 30958740
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||| ||||| ||||||||||||||||| ||||||| |||||||||||||    
T  30958689 aataccacttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 13254732 - 13254690
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  13254732 ctgtaatttcagattcttccacttttggtccctcatttcacca 13254690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 20499057 - 20498999
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||||| |||| ||||||||||| |||||| |||| ||||||| |||||||||||    
T  20499057 gatttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcacca 20498999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 460
Target Start/End: Original strand, 26236124 - 26236257
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 426  Q
    |||| ||||||| ||||||| |||| |||||||||||| ||||  | |||||||||||||         |||||| ||| |||| ||||||||||| |||    
T  26236124 ttagggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagatt 26236223  T
Q  427 cttccactgttggtccctcatttcaccatgtcag 460  Q
    ||| |||| |||||||||| ||||| || |||||    
T  26236224 ctttcacttttggtccctcctttcatcacgtcag 26236257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 13284779 - 13284735
Alignment:
Q  343 ctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 13284485 - 13284532
Alignment:
Q  407 tgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||| ||||||||||| ||||||||||| || ||||||||||||||||    
T  13284485 tgtccctgtaatttcatattcttccacttttagtccctcatttcacca 13284532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 42670722 - 42670773
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||| |||||||||||| |||| |||| || |||||||||||||    
T  42670722 aatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 13254492 - 13254618
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    |||||| ||||||||||||||  || |||||||||||||| ||||| | ||||| |||||||         |||||||||| ||||  |||||||||| |    
T  13254492 ttttagggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcaga 13254591  T
Q  425 ttcttccactgttggtccctcatttca 451  Q
    ||||| |||| ||||| |||| |||||    
T  13254592 ttctttcacttttggttcctcctttca 13254618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 17463094 - 17463212
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||  |||||| |||||| |||||||||| |||| || |||||||| ||||         | ||||||| |||| |||||||||||  |||| |||    
T  17463094 gtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaattagattttgtccctgtaatttcaggttctccca 17463193  T
Q  433 ctgttggtccctcatttca 451  Q
    || ||||||||||||||||    
T  17463194 cttttggtccctcatttca 17463212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 26136193 - 26136143
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| |||| |||||||||| | ||||||| |||||||||    
T  26136193 gtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 33290344 - 33290298
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcatttcaccatgtca 459  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| ||||    
T  33290344 tgtaatttcatattcttccacttttggtccctaatttcaccacgtca 33290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 12419095 - 12419046
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 385  Q
    |||||| ||||| ||||||||||||||||| |||| || |||||||||||    
T  12419095 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 12431155 - 12431106
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 385  Q
    |||||| ||||| ||||||||||||||||| |||| || |||||||||||    
T  12431155 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||| ||||||| ||||||||||||||||| |||| || |||||||| ||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 22263383 - 22263346
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  22263383 ctgtaatttcaaattcctccacttttggtccctcattt 22263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 23854858 - 23854821
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  23854858 ctgtaatttcaaattcctccacttttggtccctcattt 23854821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 23855070 - 23855033
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatt 370  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  23855070 gtaaatacctcttttcgtccctgtaatattagcgaatt 23855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 460
Target Start/End: Original strand, 42670788 - 42670849
Alignment:
Q  399 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| |||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacgtcag 42670849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 44098933 - 44098896
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  44098933 atttagattatgtccctgtaatttcagattcttccact 44098896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 322 - 460
Target Start/End: Original strand, 1402 - 1540
Alignment:
Q  322 ttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttc 421  Q
    ||||||| || ||||||||||||||| | ||| |||||||| || |||||||||||||||||||||        ||||||||||||||| ||||||||||    
T  1402 ttgttttaagggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttc 1501  T
Q  422 aaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    | ||||||||||| |||||||||| ||||| || |||||    
T  1502 agattcttccacttttggtccctcctttcatcacgtcag 1540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 446
Target Start/End: Complemental strand, 1782 - 1672
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||| |||||||| ||||||||||||||| | |||| || ||||||||||| |         | ||||||||||||  |||||||||| |||||||||    
T  1782 gtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa---aattagattatgtccttgtaatttcagattcttcca 1686  T
Q  433 ctgttggtccctca 446  Q
    || |||||||||||    
T  1685 cttttggtccctca 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 339 - 460
Target Start/End: Original strand, 42112993 - 42113114
Alignment:
Q  339 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttg 438  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||        ||||||||||||||| ||||||||| | |||||| |||| |||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctttcacttttg 42113092  T
Q  439 gtccctcatttcaccatgtcag 460  Q
    |||||||||||||||| |||||    
T  42113093 gtccctcatttcaccacgtcag 42113114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 43851667 - 43851788
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  43851667 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttcca 43851766  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||| ||||||||| |||||    
T  43851767 cttttgatccctcattccacca 43851788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 454
Target Start/End: Original strand, 30789519 - 30789631
Alignment:
Q  342 tctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtc 441  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||        |||||||||| |||||||||||||||| |||| |||||| ||| ||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgatc 30789618  T
Q  442 cctcatttcacca 454  Q
    |||||||||||||    
T  30789619 cctcatttcacca 30789631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 14820297 - 14820415
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||||| |||||        |||||||||| |||| ||||||||||| |||||||||    
T  14820297 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 14820396  T
Q  433 ctgttggtccctcatttca 451  Q
    || |||||||||| |||||    
T  14820397 cttttggtccctcctttca 14820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 10108743 - 10108618
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  10108743 aatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 10108644  T
Q  435 gttggtccctcatttcaccatgtcag 460  Q
     ||||||||| ||| ||||| |||||    
T  10108643 tttggtcccttattccaccacgtcag 10108618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 10108372 - 10108500
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  10108372 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 10108471  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  10108472 acttttggtccctcctttcatcacgtcag 10108500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 21147941 - 21148067
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 433  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| ||||||||||    
T  21147941 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 21148040  T
Q  434 tgttggtccctcatttcaccatgtcag 460  Q
    | ||||||||| ||| ||||| |||||    
T  21148041 ttttggtcccttattccaccacgtcag 21148067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 460
Target Start/End: Complemental strand, 5555239 - 5555117
Alignment:
Q  339 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccactgtt 437  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||| ||||         |||||||||| |||| ||||||||||| ||||||||||| ||    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccactttt 5555140  T
Q  438 ggtccctcatttcaccatgtcag 460  Q
    ||||||| ||| |||||||||||    
T  5555139 ggtcccttattccaccatgtcag 5555117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 14820667 - 14820542
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  14820667 aatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 14820568  T
Q  435 gttggtccctcatttcaccatgtcag 460  Q
     ||||||||| ||| ||||| |||||    
T  14820567 tttggtcccttattccaccacgtcag 14820542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 7689899 - 7689771
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||         |||||| ||| |||| ||||||||||| ||||||||    
T  7689899 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattcttcc 7689800  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||| ||||||||| ||||| |||||    
T  7689799 acttttgatccctcattccaccacgtcag 7689771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 30789883 - 30789755
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||||||||||||| ||||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  30789883 gtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 30789784  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||| || ||||| || |||||    
T  30789783 acttttggtccatcgtttcatcacgtcag 30789755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 17622892 - 17623017
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||| |||||||||||| ||||||  |||||||||||||        |||||||||| ||| |||||||||| | |||||||||    
T  17622892 gtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt-aaaaaaagatttagattttgt-tctgtaattttagattcttcca 17622989  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||||||||||||| ||||| |||||    
T  17622990 cttttggtccctcattccaccacgtcag 17623017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 444
Target Start/End: Original strand, 5554864 - 5554983
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||| ||||| |||| || |||||||| |    
T  5554864 ttttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcata 5554963  T
Q  425 ttcttccactgttggtccct 444  Q
    |||||||||| |||||||||    
T  5554964 ttcttccacttttggtccct 5554983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 42113357 - 42113232
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||| |||||| ||||||||||||||| | ||||||| ||||||| |||||         | |||||||||||| || ||||||||||||||||||    
T  42113357 gtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa--aattagattatgtccctttaatttcaaattcttcca 42113260  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||| |||||| ||||| ||||||||    
T  42113259 cttttgatccctcctttcatcatgtcag 42113232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 460
Target Start/End: Complemental strand, 10171525 - 10171391
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    ||||| ||||||||| ||||| ||||||||||||||||| |||| || |||||||||||||          ||||||||| |||| ||||||||| | ||    
T  10171525 tttagggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagat 10171426  T
Q  426 tcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||| |||| ||||||||||||| || ||||||||    
T  10171425 tctttcacttttggtccctcattccatcatgtcag 10171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 460
Target Start/End: Complemental strand, 17623261 - 17623135
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 433  Q
    ||||||||||||||  |||||||||||||||| ||||  | ||||||| |||||        |||||||||| ||||  |||||||||||||||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaagatttagattttgtccttgtaatttcaaattcttccac 17623162  T
Q  434 tgttggtccctcatttcaccatgtcag 460  Q
    | |||||| ||| ||||| || |||||    
T  17623161 ttttggtcactcctttcatcacgtcag 17623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 7689520 - 7689644
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||  |||||||| |||         |||||||||| ||||  |||||||||| ||    
T  7689520 tttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagatt-tgtccttgtaatttcagat 7689618  T
Q  426 tcttccactgttggtccctcatttca 451  Q
    ||||||||| |||||||||| |||||    
T  7689619 tcttccacttttggtccctcttttca 7689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 14767880 - 14767826
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  14767880 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 14767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 20875692 - 20875750
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  20875692 tttttagggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtcc 20875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 22494696 - 22494638
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||| | |||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  22494696 gatttagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccacca 22494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 26137060 - 26136939
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||| ||||| ||||||||||||||||  ||||||  |||||||||||           | ||||||| |||| ||||||||||| |||||||||    
T  26137060 gtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattcttcca 26136961  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  26136960 cttttggtccctcattccacca 26136939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 26532849 - 26532913
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||||||| ||||||| ||| ||||||||| ||||| |||||    
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcag 26532913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 18044203 - 18044153
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||    
T  18044203 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 42606129 - 42606019
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||||||||||||||||||||| ||||  | ||||||||  |||         |||||||||| |||| | ||||||||||||||||||    
T  42606129 gtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattcttcc 42606030  T
Q  432 actgttggtcc 442  Q
    ||| |||||||    
T  42606029 acttttggtcc 42606019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 2583322 - 2583370
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagt 381  Q
    |||||||||||||||  | |||||||||||||| |||||||||||||||    
T  2583322 gtaaatacctcttttcattcctgtaatattagcgaatttcgattttagt 2583370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 14767573 - 14767637
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||| ||||||| ||||||||| ||| ||||| |||||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcag 14767637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 21148312 - 21148184
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||| ||||||||||||  |||| || |||||||||||||          | ||||||| ||||  |||||||||| ||||||||    
T  21148312 gtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattcttcc 21148213  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| || ||||||| ||||| ||||||||    
T  21148212 acttttagtccctcctttcatcatgtcag 21148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 35367406 - 35367466
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||| || ||||| |||||||    
T  35367406 tttagggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 43481691 - 43481581
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||| ||||||| ||| ||||||||||||| |||| || |||||||| ||||          |||||| ||| |||| |||||||||||||||||||    
T  43481691 gtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattcttc 43481592  T
Q  431 cactgttggtc 441  Q
    |||| ||||||    
T  43481591 cactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 10108556 - 10108593
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  10108556 ctgtaatttcaaattcctccacttttggtccctcattt 10108593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 20877118 - 20877069
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 385  Q
    |||||||||||| ||||||||||||| ||| |||| || |||||||||||    
T  20877118 aatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 18500317 - 18500438
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  18500317 gtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttcca 18500416  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  18500417 cttttggtccctcattccacca 18500438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 32017879 - 32017752
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  32017879 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 32017780  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||||||| ||||| || |||||    
T  32017779 cttttggtccctcctttcatcacgtcag 32017752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 9481184 - 9481312
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         ||||||||||||||| ||||||||||| ||||||||    
T  9481184 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcc 9481283  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    | | |||||||||| ||||| || |||||    
T  9481284 aattttggtccctcctttcatcacgtcag 9481312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 24732313 - 24732192
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| | |||| |||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  24732313 gtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattcttcc 24732215  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  24732214 acttttggtccctcattccacca 24732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 26385649 - 26385596
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 26385596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 9854198 - 9854135
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||||  |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  9854198 atttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcag 9854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 460
Target Start/End: Original strand, 14680949 - 14681012
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcag 14681012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 19284195 - 19284258
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtca 459  Q
    |||||||||| |||| ||||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  19284195 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 17142744 - 17142798
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttca 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 18500705 - 18500655
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  18500705 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 24731937 - 24731991
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||    
T  24731937 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 26385280 - 26385402
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||| ||||||||||||| ||||  | ||||||||| |||         |||||||||| |||| ||||||||| | ||||||||    
T  26385280 gtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattcttcc 26385379  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  26385380 acttttggtccctcattccacca 26385402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 30458903 - 30459031
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| |||||| ||||||||||||||||  ||||||| ||||||| || ||          ||||||||||||||| ||||||||||| |||||||     
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattcttca 30459002  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| || ||| |||||||||||| |||||    
T  30459003 acttttagtctctcatttcaccacgtcag 30459031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 460
Target Start/End: Original strand, 10321737 - 10321860
Alignment:
Q  335 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||| |||||| ||||||||||||||||| |||| || ||||||||||||            ||||||||| || ||||||||||| |||||| ||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata--ttagattatatccctgtaatttcatattcttacact 10321834  T
Q  435 gttggtccctcatttcaccatgtcag 460  Q
     ||| ||||||||||||||| |||||    
T  10321835 tttgctccctcatttcaccacgtcag 10321860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 33714553 - 33714611
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||||||| |||||    
T  33714553 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccacca 33714611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 9481494 - 9481430
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| |||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcag 9481430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 2299697 - 2299635
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||| ||||||| ||||||| || |||||||||||||| |||| || ||||||| |||||    
T  2299697 tttttagggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 9154884 - 9154982
Alignment:
Q  336 aatacctctttttgtccctgtaata-ttagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| |||||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 9154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 30617969 - 30618019
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| ||||||||||||||||  ||||  |||||||||||    
T  30617969 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcc 30618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 32017550 - 32017596
Alignment:
Q  341 ctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||| ||| |||||||| |||||||||||||||| ||||    
T  32017550 ctctttttgtccatgtgatattagcgaatttcgattttagtctctgt 32017596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 366
Target Start/End: Original strand, 3229962 - 3229995
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagca 366  Q
    ||||||| ||||||||||||||||||||||||||    
T  3229962 gtaaatatctctttttgtccctgtaatattagca 3229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 15942447 - 15942410
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccact 434  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  15942447 atttagattatgtctctataatttcatattcttccact 15942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 30618147 - 30618184
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  30618147 ctgtaatttcaaattcctccacttttggtccctcattt 30618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 32017728 - 32017691
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  32017728 ctgtaatttcaaattcctccacttttggtccctcattt 32017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 33714683 - 33714642
Alignment:
Q  408 gtctctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||| |||||| ||||||||||||||    
T  33714683 gtctctgtaatttcagattcctccacttttggtccctcattt 33714642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 24732007 - 24732059
Alignment:
Q  399 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    ||||||| |||| ||||||||||| ||||||| ||| |||||||||| |||||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 24732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 30618029 - 30618077
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctc 445  Q
    ||||||||| |||| ||||||||||| ||| ||||||| ||||||||||    
T  30618029 atttagattttgtccctgtaatttcatattgttccacttttggtccctc 30618077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 4945 - 4817
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| || ||||| |||||||        |||||||||| ||||  |||||||||| ||    
T  4945 ttttagggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatat 4846  T
Q  426 tcttccactgttggtccctcatttcacca 454  Q
    ||||||||| ||||||||||||| |||||    
T  4845 tcttccacttttggtccctcattccacca 4817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 4564 - 4618
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||    
T  4564 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 23705041 - 23704915
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattc 427  Q
    |||| ||||||||||||||| ||| ||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| ||||    
T  23705041 ttagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattc 23704942  T
Q  428 ttccactgttggtccctcatttcacca 454  Q
    ||||||| ||||||||||||| |||||    
T  23704941 ttccacttttggtccctcattccacca 23704915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 12006535 - 12006664
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||         | ||||||| |||| ||||||||||| |    
T  12006535 tttttagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcaga 12006634  T
Q  425 ttcttccactgttggtccctcatttcacca 454  Q
    |||||||||| ||| ||||||||| |||||    
T  12006635 ttcttccacttttgatccctcattccacca 12006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 41600334 - 41600206
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  41600334 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 41600235  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  41600234 acttttggtccctcctttcatcacgtcag 41600206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 28218180 - 28218309
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  28218180 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 28218279  T
Q  431 cactgttggtccctcatttcaccatgtcag 460  Q
    |||| ||||||||||||| ||||| |||||    
T  28218280 cacttttggtccctcattccaccacgtcag 28218309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 10409749 - 10409628
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||||||||  ||| |||||||||||| |||| ||||||||||||||||        |||||||||| |||||||||||||| | |||||||||    
T  10409749 gtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttcca 10409650  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||| ||||||||| |||||    
T  10409649 cttttgatccctcattccacca 10409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 25772366 - 25772487
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||        |||||||||| ||||  |||||||||| |||||||||    
T  25772366 gtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 25772465  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||| ||||||||| |||||    
T  25772466 cttttgttccctcattccacca 25772487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 16995202 - 16995329
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| ||||||| |||||         ||||||||| |||| ||||||||||| |||||||||    
T  16995202 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattcttcca 16995301  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||||| |||| ||||| |||||    
T  16995302 cttttggtcccacattccaccacgtcag 16995329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 28218539 - 28218420
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  28218539 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 28218440  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||||||| |||||    
T  28218439 acttttggtccctcctttca 28218420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 460
Target Start/End: Complemental strand, 12006921 - 12006788
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 426  Q
    |||| ||||||||||||||| || | |||||||||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| |||    
T  12006921 ttagggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagatt 12006822  T
Q  427 cttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||| |||||||||| ||||| || |||||    
T  12006821 cttccacttttggtccctcctttcatcacgtcag 12006788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 20458686 - 20458815
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||||| |||||||| | |||| ||||||||||||||| | |||| || |||||||||||||         ||||||||| |||| ||||||||||| |    
T  20458686 tttttagggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaaatttagattttgtcgctgtaatttcaga 20458785  T
Q  425 ttcttccactgttggtccctcatttcacca 454  Q
    |||||||||| ||||||||||||| |||||    
T  20458786 ttcttccacttttggtccctcattccacca 20458815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 38879725 - 38879848
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||||||||||||||||| |||| | |||||||| |||||          |||||||||| |||| ||||||||||| |||||||    
T  38879725 gtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 38879824  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||||||| |||||    
T  38879825 cacttttggtccctcattccacca 38879848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 38880097 - 38879973
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||||||  | |         ||||||||| |||| ||||||||||| |||||||||    
T  38880097 gtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc--tttaaaaaaaaaatttagattttgtccctgtaatttcagattcttcca 38880000  T
Q  433 ctgttggtccctcatttcaccatgtca 459  Q
    || |||||||||| |||||||| ||||    
T  38879999 cttttggtccctcctttcaccaagtca 38879973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 48672655 - 48672536
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||         |||||||||| | || ||||||||||| ||||||||    
T  48672655 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttcc 48672556  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||||||| |||||    
T  48672555 acttttggtccctcctttca 48672536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 20419538 - 20419660
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||| |||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  20419538 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 20419637  T
Q  432 actgttggtccctcatttcacca 454  Q
    | | ||||||||||||| |||||    
T  20419638 atttttggtccctcattccacca 20419660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 23704664 - 23704782
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||| || ||||        |||||| ||| |||| ||||||||||| |||||||||    
T  23704664 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttcca 23704763  T
Q  433 ctgttggtccctcatttca 451  Q
    || |||||||||| |||||    
T  23704764 cttttggtccctcctttca 23704782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 20419913 - 20419793
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||||||||||||||||||| | |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  20419913 gtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 20419814  T
Q  431 cactgttggtccctcatttca 451  Q
     ||| |||||||||| |||||    
T  20419813 tacttttggtccctcctttca 20419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 20963869 - 20963760
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||         |||||||||  ||| ||||||||||| |||||| ||    
T  20963869 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattctttca 20963770  T
Q  433 ctgttggtcc 442  Q
    || |||||||    
T  20963769 cttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 48648264 - 48648385
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||||||||||| |||        |||||||||| |||| ||||||||||| ||| || ||    
T  48648264 gtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaagatttagattttgtccctgtaatttcagattttttca 48648363  T
Q  433 ctgttggtccctcatttcacca 454  Q
     | ||||||||||||| |||||    
T  48648364 tttttggtccctcattccacca 48648385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 460
Target Start/End: Original strand, 48672274 - 48672409
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaa 424  Q
    |||| ||||||||||||||| ||||||||||||||||  ||||||| |||||||| ||||           ||||||||||  ||||||||||||||| |    
T  48672274 ttagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcaga 48672373  T
Q  425 ttcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| ||| ||||||||| ||||| |||||    
T  48672374 ttcttccacttttgatccctcattccaccacgtcag 48672409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 6465857 - 6465984
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| || |||| |||| |||||||||||| |||| || |||||||||||||         |||||||||||||   |||||||||| |||||||||    
T  6465857 gtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaatatttagattatgttcttgtaatttcagattcttcca 6465956  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||||||| ||||| || |||||    
T  6465957 cttttggtccctcctttcatcacgtcag 6465984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 7657972 - 7658101
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt---nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||           |||||||||||||||  |||||||||||||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  431 cactgttggtccctcatttcaccatgtcag 460  Q
    |||| ||||||| || ||||| || |||||    
T  7658072 cacttttggtccatcctttcatcacgtcag 7658101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 23383876 - 23383757
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg-tnnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||  ||||  ||||||||||||||          |||||||||| |||| ||||||||||| ||||||||    
T  23383876 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 23383777  T
Q  432 actgttggtccctcatttca 451  Q
    ||  |||||||||| |||||    
T  23383776 acctttggtccctcctttca 23383757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 48648604 - 48648486
Alignment:
Q  332 agtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||| |||||| ||||| ||||||||||| |||||||||||||||| || |        |||||||||| ||||| |||||||| | ||||||||    
T  48648604 agtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctat-aaaaaaagatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  432 actgttggtccctcatttca 451  Q
    |||  ||||||||| |||||    
T  48648505 acttctggtccctcctttca 48648486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 44816833 - 44816959
Alignment:
Q  333 gtaaatacctcttttt--gtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaattc 427  Q
    |||||||||||||||   ||||||||||||||||| ||||||| |||||||| ||||           ||||| |||| |||| ||||||||||| ||||    
T  44816833 gtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattc 44816932  T
Q  428 ttccactgttggtccctcatttcacca 454  Q
    ||||||| ||||||||||||| |||||    
T  44816933 ttccacttttggtccctcattccacca 44816959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 7658341 - 7658287
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||| ||||    
T  7658341 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 24195248 - 24195198
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  24195248 gtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 33162912 - 33162783
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||| ||||||||||||| ||||||  ||||||||| | |          ||||| |||||||||  ||||||||||||||||||    
T  33162912 gtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaaattcttc 33162813  T
Q  431 cactgttggtccctcatttcaccatgtcag 460  Q
    |||| || |||  ||||||||||| |||||    
T  33162812 cacttttagtctttcatttcaccacgtcag 33162783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 41599960 - 41600082
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||||||||  |||||||||||||||| ||||||| ||||||||| | |          ||||||||| |||| ||||||||||| ||||||||    
T  41599960 gtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattcttcc 41600059  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||  ||| ||||||||| |||||    
T  41600060 acatttgatccctcattccacca 41600082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 20459003 - 20458954
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctc 445  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||    
T  20459003 gatttagattttgtcactgtaatttcagattcttccacttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 1250518 - 1250454
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| || |||||||| ||||||||||| |||||||||| ||||| || |||||    
T  1250518 gatttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcag 1250454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 24195108 - 24195056
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatt 448  Q
    |||||||||| ||||  |||||||||| ||||||||||| |||||||||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcatt 24195056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 451
Target Start/End: Complemental strand, 25772712 - 25772588
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 426  Q
    |||| ||||||| ||||||| |||||| |||||||||  |||| |  |||||||||||||         |||||||||| |||| ||||||||||| |||    
T  25772712 ttagggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 25772613  T
Q  427 cttccactgttggtccctcatttca 451  Q
    |||| ||| |||||||||| |||||    
T  25772612 cttctacttttggtccctcctttca 25772588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 31851243 - 31851369
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||| | |||||||||  ||||||||||||||| |||||         ||||||||| ||||  |||||||||| ||| |||||    
T  31851243 gtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa-atttagattctgtcattgtaatttcatatttttcca 31851341  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||| || ||| |||||||| |||||    
T  31851342 cttttgatctctcttttcaccacgtcag 31851369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 6466181 - 6466127
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||| ||||||||||  ||||||||||||| ||||||| |||||||| ||||    
T  6466181 gtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgt 6466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 382
Target Start/End: Complemental strand, 31852203 - 31852157
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtc 382  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  31852203 aatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 20963561 - 20963613
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatt 448  Q
    ||||||||||  ||| ||||||||| | ||||||||||| |||||||||||||    
T  20963561 gatttagatttagtccctgtaattttagattcttccacttttggtccctcatt 20963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 20963686 - 20963650
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  20963686 tgtaatttcatattcttccacttttggtccctcattt 20963650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 451
Target Start/End: Complemental strand, 31851548 - 31851496
Alignment:
Q  399 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||| ||| |||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttca 31851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 457
Target Start/End: Complemental strand, 16722380 - 16722242
Alignment:
Q  320 atttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaat 418  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||         |||||||||| |||| |||||||    
T  16722380 atttttttttagggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaat 16722281  T
Q  419 ttcaaattcttccactgttggtccctcatttcaccatgt 457  Q
    |||| ||||||||||| ||||||||| ||| ||||||||    
T  16722280 ttcatattcttccacttttggtcccttattccaccatgt 16722242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 14162243 - 14162119
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||||     
T  14162243 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttccactt 14162144  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  14162143 ttggtcccttattccaccacgtcag 14162119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 4204711 - 4204838
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||| ||||||||| |||||||||||||||   ||||||  ||||||| |||||        ||||||||||||||| ||||||||||| |||||||||    
T  4204711 gtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttcca 4204810  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||||||||||||||||||| |||||    
T  4204811 cttttggtccctcatttcaccacgtcag 4204838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 460
Target Start/End: Complemental strand, 43572773 - 43572639
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    |||||| |||||||||||||||  |||||||||||||  |||||| || ||||||| |||||         ||||||||| |||| ||||||||||| ||    
T  43572773 ttttagggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaaatttagattctgtccctgtaatttcagat 43572674  T
Q  426 tcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||||||||||||||||||| |||||    
T  43572673 tcttccacttttggtccctcatttcaccacgtcag 43572639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 5800607 - 5800735
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||         ||||||||||||||| ||||||||||| ||||||||    
T  5800607 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcc 5800706  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    | | |||||||||| ||||| || |||||    
T  5800707 atttttggtccctcctttcatcacgtcag 5800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 9266977 - 9267093
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  9266977 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 9267076  T
Q  432 actgttggtccctcatt 448  Q
    ||| |||||||||||||    
T  9267077 acttttggtccctcatt 9267093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 14171589 - 14171716
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||||||| |  ||||        |||||||||| |||| |||||||||||||||||||||    
T  14171589 gtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttcca 14171688  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||| ||||||||| ||||| |||||    
T  14171689 cttttgatccctcattccaccacgtcag 14171716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 14171970 - 14171834
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaa 423  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||      
T  14171970 tttttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctg 14171871  T
Q  424 attcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||||| ||||||| || ||||| || |||||    
T  14171870 attcttccacttttggtccttcctttcatcacgtcag 14171834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 30500048 - 30500171
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    ||||||||||||  |||||||||||||||| ||||||| |||||||||||||         ||||||||| |||| ||||||||||| |||||||||||     
T  30500048 aatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcatattcttccactt 30500146  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  30500147 ttggtcccttattccaccacgtcag 30500171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 30500416 - 30500289
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||         ||||||||| |||| ||||||||||| ||| |||||    
T  30500416 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgttcca 30500317  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||||||| ||||| || |||||    
T  30500316 cttttggtccctcctttcatcacgtcag 30500289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 460
Target Start/End: Original strand, 52552681 - 52552822
Alignment:
Q  322 ttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt---nnnnnnnngatttagattatgtctctgtaat 418  Q
    |||||||||  || |||| ||||||| |||||| ||||||||||||||||||||||||||| ||||           |||||||||| |||| |||||||    
T  52552681 ttgtttttaaggttaatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaat 52552780  T
Q  419 ttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||| ||||||||||| ||| ||||| ||| |||||||||||    
T  52552781 ttcagattcttccacttttgatcccttattccaccatgtcag 52552822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 9267358 - 9267232
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||||| ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||          |||||||| |||| ||||||| ||| |    
T  9267358 tttttagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcaga 9267259  T
Q  425 ttcttccactgttggtccctcatttca 451  Q
    |||||| ||| |||||||||| |||||    
T  9267258 ttcttctacttttggtccctcctttca 9267232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 35995672 - 35995802
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaa 423  Q
    ||||||| ||||||||||||||| || |||||||||||||| |||| || |||||||||||||           |||||||| |||| |||||||||||     
T  35995672 tttttagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcag 35995771  T
Q  424 attcttccactgttggtccctcatttcacca 454  Q
    ||||||||||| ||||||||||||| |||||    
T  35995772 attcttccacttttggtccctcattccacca 35995802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 21633279 - 21633150
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaa 424  Q
    |||||| |||||||||| || | ||||||||||||||||| ||||||  ||||||||||| |         |||||||||| |||| ||||||||||| |    
T  21633279 ttttagggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcaga 21633180  T
Q  425 ttcttccactgttggtccctcatttcacca 454  Q
    |||||||||| ||||||||||||| |||||    
T  21633179 ttcttccacttttggtccctcattccacca 21633150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 43572385 - 43572510
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    ||||| |||||||| |||||| || |||||||||||||| ||||||| |||||||||||||          ||||||||| |||| ||||||||||| ||    
T  43572385 tttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagat 43572484  T
Q  426 tcttccactgttggtccctcatttca 451  Q
    ||||||||| |||||||||| |||||    
T  43572485 tcttccacttttggtccctcctttca 43572510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 14262412 - 14262284
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||| ||||    
T  14262412 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgttcc 14262313  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| || ||||||| ||||| || |||||    
T  14262312 acttttagtccctcctttcatcacgtcag 14262284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 20853697 - 20853820
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||  ||||||          |||||||||| |||| || |||||||| |||||||    
T  20853697 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattcttc 20853796  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||||||| |||||    
T  20853797 cacttttggtccctcattccacca 20853820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 33372780 - 33372653
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg-tnnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||| |        |||||||||| |||| ||||||||||| ||||||||    
T  33372780 gtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 33372681  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||| |||| |||| ||||| |||||    
T  33372680 acttttgatccc-cattccaccacgtcag 33372653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 49986904 - 49986782
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng--atttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||||        |  ||||||||| ||||| |||||||||| |||||||    
T  49986904 gtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtct-tgtaatttcatattcttc 49986806  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||||||| |||||    
T  49986805 cacttttggtccctcattccacca 49986782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 451
Target Start/End: Complemental strand, 20854086 - 20853953
Alignment:
Q  317 tatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgt 415  Q
    |||||||||||| || ||||||| ||||||| |||| |||||||||||| ||||||| ||||||||| |||         |||||||||| |||| ||||    
T  20854086 tatatttgtttt-agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgt 20853989  T
Q  416 aatttcaaattcttccactgttggtccctcatttca 451  Q
    ||||||| ||||||||||| |||||||||| |||||    
T  20853988 aatttcagattcttccacttttggtccctcctttca 20853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 45003876 - 45003750
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattc 427  Q
    |||| |||||||  || ||| ||||||||||||||||| ||||||| ||||||| |||||        ||||||||||  ||| || |||||||| ||||    
T  45003876 ttagggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattc 45003777  T
Q  428 ttccactgttggtccctcatttcacca 454  Q
    ||||||| ||||||||||||| |||||    
T  45003776 ttccacttttggtccctcattccacca 45003750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 14161937 - 14162001
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| || |||||    
T  14161937 gatttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcag 14162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 19112766 - 19112889
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| |||| |||||||||||| |||| || |||||||||||||          |||||||||| |||| ||| ||||||| |||||||    
T  19112766 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttc 19112865  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||| ||| |||||    
T  19112866 cacttttggtcccttattccacca 19112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 33372400 - 33372536
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaa 423  Q
    ||||||| ||||||| ||||||| ||||||||||||||||| ||||  | ||||||| |||||         |||||||||| |||| |||||||||||     
T  33372400 tttttagggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcag 33372499  T
Q  424 attcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||| |||||||||| ||||| || |||||    
T  33372500 attattccacttttggtccctcctttcatcacgtcag 33372536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 45970292 - 45970169
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||          |||||| ||| |||| ||||||||||| |||||||    
T  45970292 gtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattcttc 45970193  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||| || |||| |||||    
T  45970192 cacttttggttccccattccacca 45970169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 52553000 - 52552936
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||| || |||||    
T  52553000 gatttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcag 52552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 444
Target Start/End: Complemental strand, 35996051 - 35995942
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||         | ||||| | |||||| ||||||||| |||||||||    
T  35996051 gtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa--aattagaatttgtctcagtaatttcagattcttcca 35995954  T
Q  433 ctgttggtccct 444  Q
    || |||||||||    
T  35995953 cttttggtccct 35995942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 45969917 - 45970036
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||  |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||| |    
T  45969917 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttc 45970016  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||| ||| |||||    
T  45970017 acttttggtctctcctttca 45970036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 15328465 - 15328519
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  15328465 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 15328519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 444
Target Start/End: Original strand, 16721993 - 16722105
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||| ||||          ||||||||| ||||  |||||||||| ||||||||    
T  16721993 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattcttcc 16722092  T
Q  432 actgttggtccct 444  Q
    ||| |||||||||    
T  16722093 acttttggtccct 16722105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 454
Target Start/End: Complemental strand, 5800977 - 5800859
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| ||||||||||||||||| |||| || ||| |||||||||         |||||||||| ||||  |||||||||| |||||||||||    
T  5800977 aatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 5800879  T
Q  435 gttggtccctcatttcacca 454  Q
     ||||||||| ||| |||||    
T  5800878 tttggtcccttattccacca 5800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 11003734 - 11003853
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||||||||||||| |||||||||| | |||| || |||||||||||||         || ||||||| ||||  |||||||||| ||||||||    
T  11003734 gtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattcttcc 11003833  T
Q  432 actgttggtccctcatttca 451  Q
    ||| ||||||| || |||||    
T  11003834 acttttggtccatcctttca 11003853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 454
Target Start/End: Original strand, 14262041 - 14262160
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||| ||||||| ||||||||||||||||| |||| || ||||||||| |||          ||||||||| |||| ||||||||||| |||||||||||    
T  14262041 aatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccact 14262140  T
Q  435 gttggtccctcatttcacca 454  Q
     ||||||||| ||| |||||    
T  14262141 tttggtcccttattccacca 14262160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 19113141 - 19113022
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||||| |||||||| | |||| || |||||||||||||         |||||||||| | || ||||||||||| |||||||     
T  19113141 gtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattcttct 19113042  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||||||| |||||    
T  19113041 acttttggtccctcctttca 19113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 36991025 - 36990922
Alignment:
Q  343 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 442  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||          |||||||| |||| ||||||||| | ||||||||||| || ||||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtcc 36990926  T
Q  443 ctca 446  Q
    ||||    
T  36990925 ctca 36990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 37016465 - 37016362
Alignment:
Q  343 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 442  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||          |||||||| |||| ||||||||| | ||||||||||| || ||||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtcc 37016366  T
Q  443 ctca 446  Q
    ||||    
T  37016365 ctca 37016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 45003498 - 45003617
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||| |||||||||||||||| || ||| ||||||| |         |||||||||| |||| ||||||||||| ||||||||    
T  45003498 gtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattcttcc 45003597  T
Q  432 actgttggtccctcatttca 451  Q
    ||| || ||||||| |||||    
T  45003598 actttttgtccctcctttca 45003617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 49986523 - 49986649
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaa 424  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||| || |||||||| ||||          |||||||||| |||| ||||||||||| |    
T  49986523 tttagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcaga 49986622  T
Q  425 ttcttccactgttggtccctcatttca 451  Q
    |||||| ||| |||||| ||| |||||    
T  49986623 ttcttctacttttggtctctcctttca 49986649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 19720335 - 19720389
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||    
T  19720335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 19720389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 27946241 - 27946187
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||    
T  27946241 gtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 17465362 - 17465423
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||| |||||||||||||||||||| | |||||||||| ||||  ||||||||| |||||    
T  17465362 ttttagggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgt 17465423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 45058803 - 45058742
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgt 457  Q
    |||||||||| |||||||||||||||| ||||||||| | ||| ||||| ||| ||||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgt 45058742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 15328772 - 15328708
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||| ||||||| ||||||||| ||| ||||| |||||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcag 15328708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 446
Target Start/End: Original strand, 35740829 - 35740931
Alignment:
Q  343 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 442  Q
    ||||| ||||||||||||||||| |||| || |||||||||| ||        | |||||||| |||| ||||||||| ||||||||||||| || ||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag-tttagattttgtccctgtaattttaaattcttccacttttagtcc 35740927  T
Q  443 ctca 446  Q
    ||||    
T  35740928 ctca 35740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 371
Target Start/End: Original strand, 21632903 - 21632941
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaattt 371  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  21632903 gtaaatacctcttttcgtccctgtaatattagcgaattt 21632941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 32998444 - 32998382
Alignment:
Q  398 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||| |||| ||||||||||| |||| |||||| || ||||||| ||| ||||||||||    
T  32998444 tttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcag 32998382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 14262228 - 14262191
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  14262228 ctgtaatttcaaattcctccacttttggtccctcattt 14262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 3426021 - 3425973
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 384  Q
    |||||||||||| | ||||||||||||||| |||| || ||||||||||    
T  3426021 aatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 38283737 - 38283773
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  38283737 tgtaatttcaaattcctccacttttggtccctcattt 38283773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 31090062 - 31090185
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  31090062 gtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 31090161  T
Q  431 cactgttggtccctcatttcacca 454  Q
    |||| ||||||||||||| |||||    
T  31090162 cacttttggtccctcattccacca 31090185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 38573971 - 38574098
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||| |||||||||||  |||| |||||||| |||||||        |||||||||| |||| ||||||||||| |||||||||    
T  38573971 gtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 38574070  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || ||||||||||||| ||||| |||||    
T  38574071 cttttggtccctcattccaccacgtcag 38574098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 448
Target Start/End: Complemental strand, 9397081 - 9396959
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    |||||| |||||||| |||||| |||||||||||||||||||||| || |||||||||||||        |||||||||| |||| ||||||||||| ||    
T  9397081 ttttagggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagat 9396982  T
Q  426 tcttccactgttggtccctcatt 448  Q
    ||||||||| |||| || |||||    
T  9396981 tcttccacttttggaccatcatt 9396959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 462
Target Start/End: Complemental strand, 3273994 - 3273866
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||||| |        |||||||||| | || ||||||||||| |||||||||    
T  3273994 gtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaagatttagattttatccctgtaatttcagattcttcca 3273896  T
Q  433 ctgttggtccctcatttcaccatgtcagta 462  Q
    || ||| ||||||||||||||| |||||||    
T  3273895 cttttgatccctcatttcaccacgtcagta 3273866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 9396702 - 9396829
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg-tnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |        |||||||||| |||| || |||||||||||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||||||| ||||| || |||||    
T  9396802 cttttggtccctcctttcatcacgtcag 9396829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 444
Target Start/End: Complemental strand, 13132315 - 13132205
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||        |||||||||| |||| ||||||||||| |||||||||    
T  13132315 gtaaatacctattttcgtccctgtaatattagcgaatttcgattttagt-cctgtaaaaaaaagatttagattctgtccctgtaatttcatattcttcca 13132217  T
Q  433 ctgttggtccct 444  Q
    || |||||||||    
T  13132216 cttttggtccct 13132205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 334 - 460
Target Start/End: Complemental strand, 35376502 - 35376376
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 433  Q
    |||||| ||||||| |||||||||||||||||||||| |  |||||||||||||        |||||| ||| |||| ||||||||||| | ||||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagatttaaattttgtccctgtaatttcagaatcttccac 35376403  T
Q  434 tgttggtccctcatttcaccatgtcag 460  Q
    | ||||||||||||| ||||| |||||    
T  35376402 ttttggtccctcattccaccacgtcag 35376376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 448
Target Start/End: Complemental strand, 48260128 - 48260011
Alignment:
Q  331 gagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||| ||||||| ||||||||||||||||| ||||| ||||||| || ||||        |||||||||| |||| |||||||||||||||||||    
T  48260128 gagtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttc 48260029  T
Q  431 cactgttggtccctcatt 448  Q
    |||| ||| || ||||||    
T  48260028 cacttttgatcgctcatt 48260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 9618977 - 9619101
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaatt 426  Q
    ||||||||||||||| |||| |||| |||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||    
T  9618977 ttagagtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagatt 9619076  T
Q  427 cttccactgttggtccctcatttca 451  Q
    |||||||| |||||||||| |||||    
T  9619077 cttccacttttggtccctcctttca 9619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 35376165 - 35376292
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||| |||| ||||||||||||||||| ||||  | |||||||||||||        |||||||||| |||||||||||||| | |||||||||    
T  35376165 gtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttcca 35376264  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||| ||| ||||| || |||||    
T  35376265 cttttggtctctcctttcatcacgtcag 35376292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 9619355 - 9619233
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||||||||||||||||||||| ||||  | |||||||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  9619355 gtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattcttcc 9619256  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||| ||||| |||||    
T  9619255 acttttggtccttcattccacca 9619233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 34063984 - 34064106
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||| | ||||    |||||||||||||         |||||||||| |||||||||||||||| ||||||||    
T  34063984 gtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttcc 34064083  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  34064084 acttttggtccctcattccacca 34064106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 3018014 - 3018142
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||||||| ||||||||||||||||| |||| || |||||||||| ||          |||||||||| |||| ||||||||||| ||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  3018114 acttttggtccctcctttcatcacgtcag 3018142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 4356253 - 4356129
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    ||||||||||||  |||||||||||||||| ||||||| ||||| || ||||         | || |||| ||||||||||||||||||||||||||||     
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaatttgattttgtctctgtaatttcaaattcttccactt 4356154  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  4356153 ttggtcccttattccaccacgtcag 4356129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 451
Target Start/End: Original strand, 15640724 - 15640836
Alignment:
Q  339 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttg 438  Q
    ||||||||| ||||||||||||||||| |||| || ||||||| |||||        |||||||||| |||| ||||||||||| |||||| |||| |||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttg 15640823  T
Q  439 gtccctcatttca 451  Q
    ||||||| |||||    
T  15640824 gtccctcctttca 15640836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 15641027 - 15640963
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||| |||||    
T  15641027 gatttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcag 15640963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 9516986 - 9516867
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| |||||||| ||||         |||||||||| |||| ||||||||||| |||||||     
T  9516986 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttct 9516887  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||||||| |||||    
T  9516886 acttttggtccctcctttca 9516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 31090437 - 31090318
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||          | ||||||| |||| ||||||||||| |||||||     
T  31090437 gtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattcttct 31090338  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||||||| |||||    
T  31090337 acttttggtccctcctttca 31090318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 9516612 - 9516734
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||||||||||||||| |||| || ||||||||| |||         |||||||||| ||||  |||||||||| ||||||||    
T  9516612 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcc 9516711  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  9516712 acttttggtccctcattccacca 9516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 451
Target Start/End: Complemental strand, 38574343 - 38574225
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||| |||| ||||||||||||||||| ||||  | |||||||||||||         |||||||||| |||| ||||||||||| |||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  433 ctgttggtccctcatttca 451  Q
    || |||||||||| |||||    
T  38574243 cttttggtccctcctttca 38574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 13131943 - 13132071
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||||||| |||| |||||||||| | ||||||  |||||||||||||          ||||||||||||||   |||||||||| ||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||| ||||||||||||||| |||||    
T  13132043 acttttgatccctcatttcaccacgtcag 13132071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 46046432 - 46046548
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||         |  |||||| |||| ||||||||||| |||||||||    
T  46046432 gtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-----aaatagattttgtccctgtaatttcatattcttcca 46046526  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||| ||||||||| |||||    
T  46046527 cttttgatccctcattccacca 46046548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 3018383 - 3018260
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||| ||||||| ||||||||||||||| | ||||||| |||||||||||||        |||||||||| ||||  |||||||||| ||||| |||||     
T  3018383 aatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaagatttagatt-tgtccgtgtaatttcagattctaccactt 3018285  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  3018284 ttggtcccttattccaccacgtcag 3018260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 46046799 - 46046672
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||| |||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  46046799 gtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 46046701  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||| |||||| ||||| || |||||    
T  46046700 acttttgatccctcctttcatcacgtcag 46046672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 451
Target Start/End: Original strand, 4355887 - 4356002
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    ||||||||||||||| | | |||||||||| |||| || ||||||| |||||        | |||||||| ||||| |||||||||| |||||| ||||     
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgtaaaaacaagctttagattttgtctatgtaatttcatattctttcactt 4355986  T
Q  436 ttggtccctcatttca 451  Q
    ||||||||||||||||    
T  4355987 ttggtccctcatttca 4356002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 37013082 - 37012955
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||| ||| ||||||||||||||||| ||||  | |||||||||||||         | ||||||| |||| ||||||||||| |||||||||    
T  37013082 gtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttcca 37012983  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
    || |||||| ||| ||||| || |||||    
T  37012982 cttttggtcactcctttcatcacgtcag 37012955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 3273618 - 3273743
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatt--tagattatgtctctgtaatttcaaat 425  Q
    |||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||| ||          ||  |||||| |||| ||||||||||| ||    
T  3273618 ttagggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatat 3273717  T
Q  426 tcttccactgttggtccctcatttca 451  Q
    ||||||||| |||||||||| |||||    
T  3273718 tcttccacttttggtccctcctttca 3273743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 31218357 - 31218303
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||    
T  31218357 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 12904749 - 12904870
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||| ||||||| |||||| |||||||||| ||||| | |||||||||||||         ||||||||| ||||  | |||||||| |||||||||    
T  12904749 gtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaaatttagattttgtccttataatttcagattcttcca 12904848  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || |||||| |||||| |||||    
T  12904849 cttttggtctctcattccacca 12904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 18713335 - 18713208
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtc---cctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||||||| || |||||| ||||||| | ||||| ||||||||   |||||        |||||||||| |||||||||||||||| |||||||||    
T  18713335 aatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcttcca 18713236  T
Q  433 ctgttggtccctcatttcaccatgtcag 460  Q
     | ||||||||| ||| ||||| |||||    
T  18713235 gttttggtcccttattccaccacgtcag 18713208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 26252613 - 26252497
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||||||||||||||| |||| |  ||||||| |||||         |||||||||| |||| ||||||||||| ||||||||    
T  26252613 gtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 26252514  T
Q  432 actgttggtccctcatt 448  Q
    ||| |||||||| ||||    
T  26252513 acttttggtcccccatt 26252497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 34064294 - 34064246
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccct 444  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtccct 34064246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 37012773 - 37012837
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||| ||| ||||| |||||    
T  37012773 gatttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcag 37012837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 31943946 - 31944071
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaa 424  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||| || ||||||| |||||          |||||||||| |||| ||||||||||| |    
T  31943946 tttagggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcata 31944044  T
Q  425 ttcttccactgttggtccctcatttca 451  Q
    |||||||||| |||||| ||| |||||    
T  31944045 ttcttccacttttggtctctcctttca 31944071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 36887685 - 36887736
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||| ||||||||||||||||| ||||| | |||||||||||||    
T  36887685 aatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 41947230 - 41947180
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| |||||||||    
T  41947230 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 387
Target Start/End: Original strand, 43312227 - 43312265
Alignment:
Q  349 gtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccctgt 43312265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 41946967 - 41947020
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg 386  Q
    ||||||||||||||| ||||||||||||||||  |||| || ||||||||||||    
T  41946967 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 48579871 - 48579996
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| ||||||||||||||| | || |||| ||||||||  |||         |||||||||| |||||||||||||||| |||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  435 gttggtccctcatttcaccatgtcag 460  Q
     ||||||||| ||| ||||| |||||    
T  48579971 tttggtcccttattccaccacgtcag 48579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 7819322 - 7819262
Alignment:
Q  400 tagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||| |||| ||||||| ||| ||||||||||| ||||||||||||| ||||| |||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcag 7819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 26252337 - 26252389
Alignment:
Q  399 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||| |||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 26252389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 36889051 - 36888928
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||| ||||| |||||| |||||||||| ||||| | ||||||||| |||         |||||||||||||| ||||||||||| |||| ||||||     
T  36889051 aataccacttttggtccctataatattagcgaattttggttttagtcc-tgtaaaaaaaaaatttagattatgtccctgtaatttcagattcctccactt 36888953  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    || ||||||| ||| ||| ||||||    
T  36888952 ttagtccctcgtttaaccttgtcag 36888928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 7819080 - 7819135
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||| |||| |||||    
T  7819080 gatttagattttgtccctgtaatttcagattcttccacttttggttcctcctttca 7819135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 31944326 - 31944199
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||| |||||| |||| |||||||||||| ||||||| |||||||| ||||          | ||||||| ||||  |||||||||| ||||||||    
T  31944326 gtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattcttcc 31944227  T
Q  432 actgttggtccctcatttcaccatgtca 459  Q
    ||| || |||||||||| ||||| ||||    
T  31944226 actttttgtccctcattccaccacgtca 31944199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 451
Target Start/End: Complemental strand, 48580178 - 48580123
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 451  Q
    |||||||||| |||| ||||||||||| ||| ||||||| |||||||||| |||||    
T  48580178 gatttagattttgtccctgtaatttcatattgttccacttttggtccctcctttca 48580123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 46935212 - 46935170
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgatttt 378  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  46935212 aatacctcttttggtccctataatattagcgaatttcgatttt 46935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 48259825 - 48259879
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||| ||||||| ||||||||||||||||| |||| || ||||| |||||||    
T  48259825 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgt 48259879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 387
Target Start/End: Complemental strand, 51029141 - 51029095
Alignment:
Q  341 ctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 38574164 - 38574123
Alignment:
Q  408 gtctctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||| |||||| ||||||||||||||    
T  38574164 gtctctgtaatttcatattcctccacttttggtccctcattt 38574123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 4356068 - 4356104
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  4356068 tgtaatttcaaattcctccacttttggtccctcattt 4356104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 18713026 - 18713090
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||| ||||| | |||||||||| ||||| || |||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcag 18713090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 37012898 - 37012862
Alignment:
Q  413 tgtaatttcaaattcttccactgttggtccctcattt 449  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  37012898 tgtaatttcaaattcctccacttttggtccctcattt 37012862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 20996040 - 20995916
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||||||||||||||||||||| |||||   ||||||||| |||        |||||||||| |||||||||||||||| |||||||||||     
T  20996040 aatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattcttccactt 20995941  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  20995940 ttggtcccttattccaccacgtcag 20995916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 18462288 - 18462406
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  18462288 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 18462387  T
Q  433 ctgttggtccctcatttca 451  Q
     | |||||||||| |||||    
T  18462388 tttttggtccctcctttca 18462406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 24467631 - 24467749
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||| |||||| ||||||||||||||||| |||| | ||||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  24467631 gtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 24467730  T
Q  433 ctgttggtccctcatttca 451  Q
    || |||||||||| |||||    
T  24467731 cttttggtccctcctttca 24467749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 52058384 - 52058256
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||||||| |||||         ||||||||||||||| ||||||||||| ||||||||    
T  52058384 gtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattcttcc 52058285  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| |||||||||| ||||| || |||||    
T  52058284 acttttggtccctcctttcatcacgtcag 52058256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 39826052 - 39826174
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||| | |||||||||| |||||||||||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  39826052 gtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 39826151  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||| ||||||||| |||||    
T  39826152 acttttgatccctcattccacca 39826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 7473862 - 7473921
Alignment:
Q  400 tagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtca 459  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtca 7473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 460
Target Start/End: Original strand, 17606307 - 17606438
Alignment:
Q  334 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-----nnnnnnnngatttagattatgtctctgtaatttcaaattct 428  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||             |||||||||| |||  ||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  429 tccactgttggtccctcatttcaccatgtcag 460  Q
    |||||| |||||||||||||||| || |||||    
T  17606407 tccacttttggtccctcatttcatcacgtcag 17606438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 17606679 - 17606556
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 435  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||||     
T  17606679 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaagatttagattttgtccttgtaatttcagattcttccactt 17606581  T
Q  436 ttggtccctcatttcaccatgtcag 460  Q
    ||||||||| ||| ||||| |||||    
T  17606580 ttggtcccttattccaccacgtcag 17606556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 24467939 - 24467873
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagta 462  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  24467939 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagta 24467873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 29696567 - 29696685
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||        |||||||||| |||| | ||||||||| |||||||||    
T  29696567 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttcca 29696666  T
Q  433 ctgttggtccctcatttca 451  Q
    || || ||| ||| |||||    
T  29696667 ctttttgtcactcctttca 29696685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 30299607 - 30299485
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    |||||||||| |||| ||| ||||||||||||||||||||| ||||||| |||||         |||||||||| |||| ||||||||| | ||||||||    
T  30299607 gtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattcttcc 30299508  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  30299507 acttttggtccctcattccacca 30299485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 39711448 - 39711326
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| ||||  | |||||||||||||         |||||||||| |||| | ||||||||| ||||||||    
T  39711448 gtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattcttcc 39711349  T
Q  432 actgttggtccctcatttcacca 454  Q
    ||| ||||||||||||| |||||    
T  39711348 acttttggtccctcattccacca 39711326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 39826422 - 39826312
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  39826422 gtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 39826323  T
Q  432 actgttggtcc 442  Q
    ||| |||||||    
T  39826322 acttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 34749140 - 34749261
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    |||||||| ||||||  |||||||||||||||| ||||  ||||||||||||| |        |||||||||| |||| | ||||||||| |||||||||    
T  34749140 gtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattcttcca 34749239  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  34749240 cttttggtccctcattccacca 34749261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 4906964 - 4907092
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||  ||||    |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  4906964 gtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattcttcc 4907063  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||||||||||| ||||| |||||    
T  4907064 acttttggtccctcattccaccacgtcag 4907092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 8293119 - 8293055
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  8293119 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcag 8293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 30299234 - 30299352
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||| |||||         |||||||||| |||| ||||||||||| ||||||||    
T  30299234 gtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 30299332  T
Q  432 actgttggtccctcatttca 451  Q
    ||| |||||| ||| |||||    
T  30299333 acttttggtctctcctttca 30299352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 42510027 - 42510138
Alignment:
Q  343 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 442  Q
    |||||| |||||||||||||||| |||| || ||||| |||||||         ||||||||| |||| ||||||||||| ||||||||||| || ||||    
T  42510027 ctttttatccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttccacttttagtcc 42510126  T
Q  443 ctcatttcacca 454  Q
    ||||||||||||    
T  42510127 ctcatttcacca 42510138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 39970647 - 39970776
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 430  Q
    ||||||||||||||| |||| |||||||||| | |||||| |||||| || ||||          |||||||||| ||||| |||||||||| |||||||    
T  39970647 gtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattcttc 39970746  T
Q  431 cactgttggtccctcatttcaccatgtcag 460  Q
    |||| ||||||||||||| ||||| |||||    
T  39970747 cacttttggtccctcattccaccacgtcag 39970776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 52058077 - 52058135
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  52058077 gatttagactatgtccctgtaatttcagattcttccacttttggtccctcatttcacca 52058135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 18462658 - 18462533
Alignment:
Q  335 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccac 433  Q
    |||||||||||||  ||||||||||||||||||||| || ||||||| | |||         |||||||||| |||| | ||||||||| ||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  434 tgttggtccctcatttcaccatgtca 459  Q
    | |||||| |||||||||||| ||||    
T  18462558 ttttggtctctcatttcaccacgtca 18462533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 33628686 - 33628814
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 425  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||  | |||||||||| ||         |||||||||| |||| | ||||||||| ||    
T  33628686 tttagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagat 33628785  T
Q  426 tcttccactgttggtccctcatttcacca 454  Q
    |||| |||| ||||||||||||| |||||    
T  33628786 tctttcacttttggtccctcattccacca 33628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 39711076 - 39711187
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| |||  |||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||    
T  39711076 gtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 39711174  T
Q  433 ctgttggtccctc 445  Q
    || ||||||||||    
T  39711175 cttttggtccctc 39711187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 48072345 - 48072209
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaa 423  Q
    ||||||| ||||||||||||||| |||  |||||||||||  |||| || ||||||||| |||          |||||||||||||| |||||||||||     
T  48072345 tttttagggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcat 48072246  T
Q  424 attcttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||||||| ||||  ||||||||||||| |||||    
T  48072245 attcttccacttttgggtcctcatttcaccacgtcag 48072209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 460
Target Start/End: Complemental strand, 16294302 - 16294195
Alignment:
Q  354 tgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcac 452  Q
    ||||||||||||||||||||||||||||||||||          ||||||||| ||||  |||||||||| |||| |||||| ||||||||| |||| ||    
T  16294302 tgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaac 16294203  T
Q  453 catgtcag 460  Q
    ||||||||    
T  16294202 catgtcag 16294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 33629063 - 33629012
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  33629063 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 33629012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 4907274 - 4907208
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagta 462  Q
    |||||||||| |||| ||||||||||| ||||||||||| |||||||||| ||||| || |||||||    
T  4907274 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagta 4907208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 18342393 - 18342339
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||    
T  18342393 gtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 34749481 - 34749368
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||||||||||||||| ||||||||||| | |||| |||||||||||| |||         |||||||||| | || ||||||||||| ||||||||    
T  34749481 gtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattcttcc 34749382  T
Q  432 actgttggtccctc 445  Q
    ||| ||||| ||||    
T  34749381 acttttggtacctc 34749368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 460
Target Start/End: Original strand, 43539345 - 43539477
Alignment:
Q  329 tagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattc 427  Q
    ||||||||||| |||||||  ||| ||||| ||||||||||| |||||||||||| |||         |||||||||| |||| ||||||||| | |||     
T  43539345 tagagtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattg 43539444  T
Q  428 ttccactgttggtccctcatttcaccatgtcag 460  Q
    ||||||| |||||||||| ||||| || |||||    
T  43539445 ttccacttttggtccctcctttcatcacgtcag 43539477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 39971022 - 39970968
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| |||| |||||||||| | ||||||| |||||||||||||    
T  39971022 gtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgt 39970968  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 29696933 - 29696812
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 432  Q
    ||||||||||||||| ||   |||||||||||| |||| || |||||||| ||||         | ||||||| ||||  |||||||||| |||||||||    
T  29696933 gtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaattagattttgtccatgtaatttcagattcttcca 29696834  T
Q  433 ctgttggtccctcatttcacca 454  Q
    || ||||||||||||| |||||    
T  29696833 cttttggtccctcattccacca 29696812  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 8292806 - 8292934
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 431  Q
    ||||||| ||||||| ||||||||| ||||||| |||  || |||||||||||||         |||||||||| |||| ||| ||||||| ||||||||    
T  8292806 gtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattcttcc 8292905  T
Q  432 actgttggtccctcatttcaccatgtcag 460  Q
    ||| ||||| |||| ||||| || |||||    
T  8292906 acttttggttcctcttttcatcacgtcag 8292934  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 43539720 - 43539669
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||| ||||||| |||||||||||||||||||||| || ||||||| |||||    
T  43539720 aatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgt 43539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 16294045 - 16294099
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagt 381  Q
    ||||| || ||||||  |||| ||||||||||||||||| |||||||||||||||    
T  16294045 tttagggttaataccgattttggtccctgtaatattagcgaatttcgattttagt 16294099  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 20995700 - 20995754
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    |||||||||||||||  || ||||||||||||| |||| || |||||||||||||    
T  20995700 gtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 13230108 - 13230059
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtc 382  Q
    ||||||||||||||| ||| ||| ||||||||| ||||||| ||||||||    
T  13230108 gtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 17606494 - 17606531
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcattt 449  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  17606494 ctgtaatttcaaattcctccacttttggtccctcattt 17606531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 42510206 - 42510166
Alignment:
Q  412 ctgtaatttcaaattcttccactgttggtccctcatttcac 452  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  42510206 ctgtaatttcagattcctccacttttggtccctcatttcac 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 384
Target Start/End: Original strand, 8319 - 8378
Alignment:
Q  325 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 384  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  8319 tttttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

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Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 8634 - 8570
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcag 460  Q
    |||||||||| |||| ||||||||| | ||||||||||| ||||||||||||| ||||| |||||    
T  8634 gatttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcag 8570  T

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Target: scaffold0477 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 4875 - 4932
Alignment:
Q  326 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 383  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  4875 ttttagggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 5059 - 5002
Alignment:
Q  397 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||||  ||| ||||||||| | ||||||||||| ||||||||||||| |||||    
T  5059 atttagatttagtccctgtaattttagattcttccacttttggtccctcattccacca 5002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 460
Target Start/End: Complemental strand, 12355 - 12230
Alignment:
Q  336 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 434  Q
    |||||||||||| ||||||||||||||||| |||| || ||||||||||| |         |||||||||| |||| ||||||||||| |||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  435 gttggtccctcatttcaccatgtcag 460  Q
     ||||||| || ||||| || |||||    
T  12255 tttggtccatcctttcatcacgtcag 12230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 6055 - 6001
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||    
T  6055 gtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 4664 - 4721
Alignment:
Q  328 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 385  Q
    |||| ||||||||||||||| ||||||| ||||||||| |||| |  |||||||||||    
T  4664 ttagggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 7576 - 7466
Alignment:
Q  333 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 430  Q
    |||||||||| |||| ||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  7576 gtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 7477  T
Q  431 cactgttggtc 441  Q
     ||| ||||||    
T  7476 tacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 7292 - 7350
Alignment:
Q  396 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcacca 454  Q
    |||||||||| |||| ||||||||||| ||||||||||| | ||||||||||| |||||    
T  7292 gatttagattttgtccctgtaatttcatattcttccactttcggtccctcattccacca 7350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 16010 - 15950
Alignment:
Q  327 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 387  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||| || |||||||| ||||    
T  16010 tttagggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgt 15950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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