View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7866_high_3 (Length: 264)

Name: NF7866_high_3
Description: NF7866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7866_high_3
NF7866_high_3
[»] chr1 (5 HSPs)
chr1 (11-254)||(43298358-43298600)
chr1 (44-254)||(5193036-5193246)
chr1 (13-192)||(32890474-32890653)
chr1 (13-252)||(10103589-10103828)
chr1 (14-191)||(31324862-31325039)
[»] chr6 (3 HSPs)
chr6 (13-256)||(32725373-32725616)
chr6 (53-255)||(24893788-24893990)
chr6 (14-255)||(24990576-24990817)
[»] chr3 (5 HSPs)
chr3 (13-255)||(38647091-38647333)
chr3 (14-255)||(23424497-23424738)
chr3 (125-255)||(3659636-3659766)
chr3 (140-256)||(17718394-17718510)
chr3 (140-256)||(19019623-19019739)
[»] chr2 (3 HSPs)
chr2 (13-255)||(573188-573430)
chr2 (98-255)||(39012526-39012683)
chr2 (83-171)||(177579-177667)
[»] chr7 (1 HSPs)
chr7 (14-237)||(23207779-23208002)
[»] chr4 (2 HSPs)
chr4 (83-253)||(3881716-3881886)
chr4 (202-255)||(24133341-24133394)
[»] chr5 (1 HSPs)
chr5 (92-189)||(23620609-23620706)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 43298600 - 43298358
Alignment:
Q  11 agaagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttcca 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||    
T  43298600 agaagaaggtgggatatttgaggcccttcattggtgatatgaataggatcccaatttccttgaatcacgacgttgttaatagcaatagagagattttcca 43298501  T
Q  111 tgcataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatag 210  Q
    || |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  43298500 tg-ataaaatgaataggtaaggagagagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagagaa 43298402  T
Q  211 ggaggatgatgtgacacaatgcatgataagcttcatggtgatgt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43298401 ggaggatgatgtgacacaatgcatgataagcttcatggtgatgt 43298358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 5193036 - 5193246
Alignment:
Q  44 gtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgcataaaaagaataggtaaggagggagcggat 143  Q
    ||||| ||||||||||||| |||||||| |||||| |||||||||||| ||| |||||| |||| ||||||||||| ||| |||||||||| ||||||||    
T  5193036 gtgatgtgaataggatccctatttccttgaatcacggcgttgttaataacaatagagagctttttcatgcataaaatgaagaggtaaggagagagcggat 5193135  T
Q  144 caccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatagggaggatgatgtgacacaatgcatgataagctt 243  Q
    ||||||||| ||||||||| ||||||||||| | || || |||||||||| ||||||||| ||| |  |  |||||||||||||||||||||||||||||    
T  5193136 caccttgtccaagaccatgtgaaggcttaaaggaggacattttattaccgttccataaaacagaaaatgtagatgatgtgacacaatgcatgataagctt 5193235  T
Q  244 catggtgatgt 254  Q
     ||||||||||    
T  5193236 gatggtgatgt 5193246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 32890653 - 32890474
Alignment:
Q  13 aagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatg 112  Q
    |||||||||||||||||  || ||| |||| |||||||| ||||| ||||||||||||| || ||| || || |||||||||| |||||| |||||||||    
T  32890653 aagaaggtgggatatcttcggtcctccattagtgatatggatagggtcccaatttccttgaagcactgcattattaatagcaatagagagtttttccatg 32890554  T
Q  113 cataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattacc 192  Q
    ||||||| ||| ||||| |||| |||||||||||||||||| ||||| || ||||||||||||| ||||| |||||||||    
T  32890553 cataaaatgaagaggtagggagagagcggatcaccttgtctgagaccgtgggaaggcttaaaagggggcattttattacc 32890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 10103589 - 10103828
Alignment:
Q  13 aagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatg 112  Q
    |||||| || ||||||||||||||| |||| ||||| || ||||| ||||||||||||| |  ||| || ||||| ||||||| |||||| || ||||||    
T  10103589 aagaagatgagatatctgaggccctccattagtgatgtggataggttcccaatttccttgatgcactgcattgttgatagcaatagagagcttctccatg 10103688  T
Q  113 cataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggg 212  Q
    || |  | |||||||||||||| ||||||| |||||||||| |||||||  | |||||| ||   ||||| ||| |||||| ||||||||||||| |  |    
T  10103689 caaaggatgaataggtaaggagagagcggaacaccttgtctgagaccatatgtaggcttgaactagggcattttgttaccgttccataaaatagagaaag 10103788  T
Q  213 aggatgatgtgacacaatgcatgataagcttcatggtgat 252  Q
      ||| | ||||| |||||||||||||| || ||||||||    
T  10103789 ttgataaagtgacgcaatgcatgataagtttgatggtgat 10103828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 31324862 - 31325039
Alignment:
Q  14 agaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgc 113  Q
    |||||||| |||||||  || ||| |||| ||||| || ||||| ||||||||||| |  | |||| | || |||||||||| ||| |  ||||||||||    
T  31324862 agaaggtgtgatatctttggacctccattagtgatgtggataggttcccaatttccgtggaacacaacattattaatagcaatagacaacttttccatgc 31324961  T
Q  114 ataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattac 191  Q
    |||| | ||| ||||| ||||  ||||||||||||| |||||| ||||| || |||||||| |  |||||||||||||    
T  31324962 ataagatgaagaggtagggagatagcggatcaccttatctaaggccatgggagggcttaaagggaggcaatttattac 31325039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 32725373 - 32725616
Alignment:
Q  13 aagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatg 112  Q
    |||||| ||||||||||  || ||| |||||||||| |||||||||||||||||||||| | || | || || |||||||||| |||||| |||||||||    
T  32725373 aagaagatgggatatctttggtcctccattggtgatgtgaataggatcccaatttccttgagtcgcggcattattaatagcaatagagagcttttccatg 32725472  T
Q  113 cataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggg 212  Q
    ||||||| ||| | |||||||| ||||| |||||||||||| ||| |||| ||||||||||| | ||||| |||||||||| ||||||||||||| |  |    
T  32725473 cataaaatgaagatgtaaggagagagcgaatcaccttgtctgagatcatgggaaggcttaaaggagggcattttattaccgttccataaaatagagaatg 32725572  T
Q  213 aggatgatgtgacacaatgcatgataagcttcatggtgatgtcc 256  Q
     |||||||||||||||||||||||||||||| ||||||||||||    
T  32725573 tggatgatgtgacacaatgcatgataagcttgatggtgatgtcc 32725616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 255
Target Start/End: Original strand, 24893788 - 24893990
Alignment:
Q  53 ataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgcataaaaagaataggtaaggagggagcggatcaccttgtc 152  Q
    ||||| |||||| |||||| | |||||||||| ||||||||||| || || |||||||||||||  | ||| || ||||||| |||||| ||||||||||    
T  24893788 ataggttcccaacttccttgactcacagcgttattaatagcaagggaaagcttttccatgcatagtatgaaaagataaggagagagcgggtcaccttgtc 24893887  T
Q  153 taagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatagggaggatgatgtgacacaatgcatgataagcttcatggtgat 252  Q
    | |||||||| |  ||||| |||| ||||| ||| |||||  ||||||| || || |  | ||| || ||||||||||||||||| ||||| ||||||||    
T  24893888 tgagaccatgtgtgggcttgaaagggggcattttgttaccattccataatatggagaatgtggaggaggtgacacaatgcatgatgagcttgatggtgat 24893987  T
Q  253 gtc 255  Q
    |||    
T  24893988 gtc 24893990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 24990576 - 24990817
Alignment:
Q  14 agaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgc 113  Q
    |||||||| || ||||| || ||| |||| ||||| |||||||| |||||| ||||||   | ||||| || || ||||| | ||| || || |||||||    
T  24990576 agaaggtgagacatctggggtcctccattagtgatgtgaataggttcccaacttccttggcttacagcattatttatagcgatagaaagcttctccatgc 24990675  T
Q  114 ataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggga 213  Q
    | | || ||| || ||||||| |||||| ||||||||||| |||||||| |  ||||| |||| ||||| ||| |||||| ||||||||||||| |  |     
T  24990676 aaagaatgaaaagataaggagagagcgggtcaccttgtctgagaccatgggtgggcttgaaagggggcattttgttaccgttccataaaatagaaaaagt 24990775  T
Q  214 ggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
    ||| || |||||||| |||||||| || || |||||||||||    
T  24990776 ggaggaggtgacacagtgcatgatgagtttgatggtgatgtc 24990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 38647091 - 38647333
Alignment:
Q  13 aagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatg 112  Q
    |||||||||||||||||  || ||| |||| |||||||| ||||| ||||||||||||| || ||| || || |||||||||| |||||| |||||||||    
T  38647091 aagaaggtgggatatcttcggtcctccattagtgatatggatagggtcccaatttccttgaagcactgcattattaatagcaatagagagcttttccatg 38647190  T
Q  113 cataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggg 212  Q
    ||||||| ||| ||||| |||| |||||||||||||||||| ||||| || ||||||||||||| ||||| |||||||||| |||| | |||||| | ||    
T  38647191 cataaaatgaagaggtagggagagagcggatcaccttgtctgagaccgtgggaaggcttaaaagggggcattttattaccgttccaaagaatagagaagg 38647290  T
Q  213 aggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
     ||||||||  |||||||||||||| ||||| |||||||||||    
T  38647291 tggatgatgaaacacaatgcatgatgagcttgatggtgatgtc 38647333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 23424738 - 23424497
Alignment:
Q  14 agaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgc 113  Q
    |||||||| || ||||| || ||| |||| || || || ||||| |||||| |||||| | |||||||||| ||||||||||| || || ||||||||||    
T  23424738 agaaggtgagaaatctggggtcctccattagttatgtgtataggttcccaacttccttgactcacagcgttattaatagcaagggaaagcttttccatgc 23424639  T
Q  114 ataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggga 213  Q
    |||  | ||| || ||||||| |||||| ||||||||||| |||||||| |  ||||| |||| ||||| ||| |||||  ||||||| || || |  |     
T  23424638 atagtatgaaaagataaggagagagcgggtcaccttgtctgagaccatgtgtgggcttgaaagggggcattttgttacctttccataatattgagaatgt 23424539  T
Q  214 ggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
    ||| || ||||||||||| ||||| ||||| |||||||||||    
T  23424538 ggaggaggtgacacaatgtatgatgagcttgatggtgatgtc 23424497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 3659636 - 3659766
Alignment:
Q  125 aggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatagggaggatgatgtga 224  Q
    ||||| |||| ||||||||||||||| | ||||||||||| |||||||||| | || |  ||||| ||  |||| |||| ||| | || ||| |||| ||    
T  3659636 aggtagggagagagcggatcaccttgacgaagaccatgagtaggcttaaaattaggaagcttattgccattccacaaaacagagaaggtggaggatgaga 3659735  T
Q  225 cacaatgcatgataagcttcatggtgatgtc 255  Q
    ||||||||||||| ||||| ||||| |||||    
T  3659736 cacaatgcatgatgagcttgatggtaatgtc 3659766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 17718394 - 17718510
Alignment:
Q  140 ggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatagggaggatgatgtgacacaatgcatgataa 239  Q
    |||||||| ||||  ||||||||||||||||| || |  |||| ||| || ||  |||| |||||||| | || |||||| |  |||||||||||||| |    
T  17718394 ggatcaccctgtcagagaccatgagaaggcttgaagggaggcattttgtttccattccacaaaatagagaaggtggatgaggaaacacaatgcatgatga 17718493  T
Q  240 gcttcatggtgatgtcc 256  Q
    |||| ||||||| ||||    
T  17718494 gcttgatggtgacgtcc 17718510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 19019623 - 19019739
Alignment:
Q  140 ggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagatagggaggatgatgtgacacaatgcatgataa 239  Q
    |||||||| ||||  ||||||||||||||||| || |  |||| ||| || ||  |||| |||||||| | || |||||| |  |||||||||||||| |    
T  19019623 ggatcaccctgtcagagaccatgagaaggcttgaagggaggcattttgtttccattccacaaaatagagaaggtggatgaggaaacacaatgcatgatga 19019722  T
Q  240 gcttcatggtgatgtcc 256  Q
    |||| ||||||| ||||    
T  19019723 gcttgatggtgacgtcc 19019739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 573430 - 573188
Alignment:
Q  13 aagaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatg 112  Q
    ||||||||| ||||||||||| ||  |||| || || ||||| |||||||||||||||| || |||  | || ||||| |||| |||||| || ||||||    
T  573430 aagaaggtgtgatatctgaggtcccccattcgtaatgtgaatgggatcccaatttccttgaagcactacattattaattgcaacagagagcttctccatg 573331  T
Q  113 cataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggg 212  Q
    || |  | |||||||||||||| |||||||||||||||||| || ||||| ||||| |||||||   ||| ||| |||||  ||||||||||||| |  |    
T  573330 caaaggatgaataggtaaggagagagcggatcaccttgtctgaggccatgggaaggtttaaaaggatgcattttgttaccattccataaaatagagaacg 573231  T
Q  213 aggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
      | |||||||||| ||||||||||||| || |||||||||||    
T  573230 ttggtgatgtgacataatgcatgataagtttgatggtgatgtc 573188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 39012683 - 39012526
Alignment:
Q  98 gagagattttccatgcataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatcc 197  Q
    ||||| |||||||| ||||  | ||| ||||| |||| ||||||||| ||||| | ||||||||||| |||||||||| | || |  ||||| ||  |||    
T  39012683 gagagtttttccatacataggatgaacaggtagggagagagcggatcgccttgacgaagaccatgagtaggcttaaaattaggaagcttattgccattcc 39012584  T
Q  198 ataaaatagatagggaggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
    | |||| ||| | || ||| |||| ||||||||||||||| || || ||||| |||||    
T  39012583 acaaaacagagaaggtggaggatgagacacaatgcatgatgagtttgatggtaatgtc 39012526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 177667 - 177579
Alignment:
Q  83 ttgttaatagcaagagagagattttccatgcataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggctt 171  Q
    |||||||| ||||| ||||| ||||||||||| |  | ||||||||||||||  |  || ||||||||||| |||||||||| ||||||    
T  177667 ttgttaatggcaagggagagcttttccatgcagatgatgaataggtaaggagacaaagggtcaccttgtcttagaccatgagtaggctt 177579  T

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Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 23207779 - 23208002
Alignment:
Q  14 agaaggtgggatatctgaggcccttcattggtgatatgaataggatcccaatttccttaaatcacagcgttgttaatagcaagagagagattttccatgc 113  Q
    |||||||| || ||||| || ||| |||| ||||| |||||||| |||||  |||||| | ||||||| || |||||||||| ||| || || |||||||    
T  23207779 agaaggtgagaaatctggggtcctccattagtgatgtgaataggttcccatcttccttgactcacagcattattaatagcaatagaaagcttctccatgc 23207878  T
Q  114 ataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttattaccgatccataaaatagataggga 213  Q
    |||  | ||| || ||||||| ||| || |||||||||||||||||||| |  ||||| |||| ||||| ||| |||||| |||||||||| || |  |     
T  23207879 atagtatgaagagataaggagagagtgggtcaccttgtctaagaccatgtgtgggcttgaaagggggcattttgttaccgttccataaaattgagaatgt 23207978  T
Q  214 ggatgatgtgacacaatgcatgat 237  Q
    ||| || ||||| |||||||||||    
T  23207979 ggaggaggtgacgcaatgcatgat 23208002  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 3881886 - 3881716
Alignment:
Q  83 ttgttaatagcaagagagagattttccatgcataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggca 182  Q
    ||||||||||||| ||| || |||||||| || | || ||| |||||| |||  ||||||||||||||||  || ||||| | ||| || |||   ||||    
T  3881886 ttgttaatagcaatagatagcttttccatacaaagaatgaagaggtaaagagaaagcggatcaccttgtcggaggccatgtgtaggtttgaaatgcggca 3881787  T
Q  183 atttattaccgatccataaaatagatagggaggatgatgtgacacaatgcatgataagcttcatggtgatg 253  Q
     ||| |||||  ||||||| ||||| | || ||| || |||||||||||||||||||| || |||||||||    
T  3881786 ttttgttaccattccataagatagagaaggtggaggaggtgacacaatgcatgataagtttgatggtgatg 3881716  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 24133341 - 24133394
Alignment:
Q  202 aatagatagggaggatgatgtgacacaatgcatgataagcttcatggtgatgtc 255  Q
    |||||| || || |||||||| |||||||||||||||||||| |||||||||||    
T  24133341 aatagagagcgaagatgatgtaacacaatgcatgataagcttaatggtgatgtc 24133394  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 23620609 - 23620706
Alignment:
Q  92 gcaagagagagattttccatgcataaaaagaataggtaaggagggagcggatcaccttgtctaagaccatgagaaggcttaaaagtgggcaatttatt 189  Q
    |||||||| ||||||||||| || | || ||||||||| ||||  | |  |||||||||||| ||||||||||  ||||| ||| |||||||||||||    
T  23620609 gcaagagaaagattttccatacaaagaatgaataggtagggagacaacatatcaccttgtctgagaccatgagtgggcttgaaaatgggcaatttatt 23620706  T

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