View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7866_low_4 (Length: 292)

Name: NF7866_low_4
Description: NF7866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7866_low_4
NF7866_low_4
[»] scaffold0007 (1 HSPs)
scaffold0007 (130-275)||(182280-182425)
[»] chr4 (9 HSPs)
chr4 (130-275)||(20395747-20395892)
chr4 (10-134)||(34979273-34979397)
chr4 (132-277)||(42778387-42778532)
chr4 (132-282)||(53486799-53486949)
chr4 (132-283)||(53780188-53780339)
chr4 (132-282)||(18106402-18106552)
chr4 (132-282)||(34322165-34322315)
chr4 (156-275)||(10563179-10563298)
chr4 (178-282)||(30273704-30273808)
[»] chr8 (4 HSPs)
chr8 (132-282)||(23680306-23680456)
chr8 (132-277)||(17658980-17659125)
chr8 (132-275)||(45255675-45255817)
chr8 (132-272)||(36157311-36157451)
[»] chr5 (4 HSPs)
chr5 (132-275)||(20208565-20208708)
chr5 (132-283)||(6049366-6049517)
chr5 (132-277)||(4415546-4415691)
chr5 (132-277)||(7000611-7000756)
[»] chr3 (9 HSPs)
chr3 (132-283)||(47537411-47537562)
chr3 (132-275)||(26846018-26846161)
chr3 (132-282)||(48191943-48192093)
chr3 (135-275)||(50544375-50544515)
chr3 (204-282)||(33121235-33121313)
chr3 (132-242)||(43121512-43121622)
chr3 (140-240)||(23818763-23818863)
chr3 (220-259)||(19222260-19222299)
chr3 (141-209)||(27924921-27924989)
[»] chr6 (6 HSPs)
chr6 (132-282)||(17079037-17079187)
chr6 (132-275)||(17873664-17873807)
chr6 (132-275)||(18051295-18051438)
chr6 (132-277)||(9199098-9199243)
chr6 (132-275)||(11060708-11060848)
chr6 (132-220)||(649912-650000)
[»] chr1 (7 HSPs)
chr1 (132-282)||(17708123-17708273)
chr1 (132-277)||(10711007-10711152)
chr1 (132-283)||(47106527-47106677)
chr1 (132-282)||(30110771-30110921)
chr1 (166-275)||(26720812-26720921)
chr1 (132-273)||(21335216-21335357)
chr1 (132-239)||(28097809-28097916)
[»] chr2 (3 HSPs)
chr2 (132-277)||(1380231-1380376)
chr2 (132-282)||(2999594-2999744)
chr2 (132-233)||(11028063-11028164)
[»] scaffold0179 (2 HSPs)
scaffold0179 (132-275)||(7679-7822)
scaffold0179 (132-275)||(12613-12756)
[»] chr7 (4 HSPs)
chr7 (132-275)||(4077426-4077569)
chr7 (132-282)||(34231843-34231993)
chr7 (132-275)||(7458517-7458660)
chr7 (146-185)||(36228010-36228049)
[»] scaffold0912 (1 HSPs)
scaffold0912 (132-213)||(2719-2799)


Alignment Details
Target: scaffold0007 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 182425 - 182280
Alignment:
Q  130 gtgtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggt 229  Q
    |||||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  182425 gtgtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgcaagattttgtttcagacaggt 182326  T
Q  230 gggtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||    
T  182325 gggtgtggttgcctgaccctgttgagggttacactgttcgtggttc 182280  T

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Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 20395892 - 20395747
Alignment:
Q  130 gtgtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggt 229  Q
    |||||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  20395892 gtgtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgcaagattttgtttcagacaggt 20395793  T
Q  230 gggtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||    
T  20395792 gggtgtggttgcctgaccctgttgagggttacactgttcgtggttc 20395747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 34979397 - 34979273
Alignment:
Q  10 agaacctgtggtagttgactatcgttatgagttcatctttgacagtgtgaaaatgtggcagaaaatttgaacaatgtaaacaaattaataagacgctcta 109  Q
    |||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34979397 agaaccagcggtagttaactatcgttatgagttcatctttaacagtgtgaaaatgtggcagaaaatttgaacaatgtaaacaaattaataagatgctcta 34979298  T
Q  110 cacgtttcttgatgtcaaatgtgtg 134  Q
    |||||||||||||||||||||||||    
T  34979297 cacgtttcttgatgtcaaatgtgtg 34979273  T

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Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 42778532 - 42778387
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42778532 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattctgtttcagataggtgg 42778433  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    || ||||||||||| ||| ||| ||||||| | |||||||||||||    
T  42778432 gtttggttgccagatcctattgtgggttactctgttcgcggttcat 42778387  T

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Target: chr4; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 53486799 - 53486949
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||     
T  53486799 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcgagattttgtttcagacaggtga 53486898  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| ||| ||||||| | ||||| ||||||| ||||    
T  53486899 gtgtggttgccagaccctattgtgggttactctgttcgtggttcatatcac 53486949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 53780339 - 53780188
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || || ||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  53780339 gtggaggaggaggttgtgggcatgggaggaggaggaattataggagtatagggctttattgactgatgtttctctgcaagattttgtttcagacaggtgg 53780240  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcact 283  Q
    |||||||||||||| ||| || |||||||||| ||||||||||||| |||||    
T  53780239 gtgtggttgccagatcctattcagggttacactgttcgcggttcatatcact 53780188  T

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Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 18106402 - 18106552
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  18106402 gtggaggaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattttgtttccgacaggtgg 18106501  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| | | ||||||| | ||||  ||||||| ||||    
T  18106502 gtgtggttgccagaccctttggtgggttactctgttcttggttcatatcac 18106552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 34322165 - 34322315
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  34322165 gtggaggaggaggttgtgggcctgggaggaggaggagttagaggagtgtagagccttattgactgatgtttctttgcaagattttgtttccgacaggtgg 34322264  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| | | ||||||| | ||||| ||||||| ||||    
T  34322265 gtgtggttgccagaccctttggtgggttactctgttcgtggttcatatcac 34322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 10563179 - 10563298
Alignment:
Q  156 ggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgggtgtggttgccagaccctgttgag 255  Q
    |||||| || || ||| ||||||||||||| |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||| || ||    
T  10563179 ggaggaggaggaattagaggagtgtagggctttattgactgatgtttctctgcaagattttgttttagacaggtgggtgtggttgccagatcctattcag 10563278  T
Q  256 ggttacacagttcgcggttc 275  Q
    |||||||| |||||||||||    
T  10563279 ggttacactgttcgcggttc 10563298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 282
Target Start/End: Original strand, 30273704 - 30273808
Alignment:
Q  178 tgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgggtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| | ||||| |||||||    
T  30273704 tgtagggccttattgattgatatttttttgcaagattttgtttcagacaggtgggtgtggttgccagacccttttgtgggttactctgttcgtggttcat 30273803  T
Q  278 ctcac 282  Q
     ||||    
T  30273804 atcac 30273808  T

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Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 23680456 - 23680306
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||| | ||||||| ||||||||| || |||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||    
T  23680456 gtggaggagggggttgtgggtttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgctagattctgtttcagacaggtgg 23680357  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23680356 gtgtggttgccagaccctgttgagggttacactgttcgcggttcatatcac 23680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 17659125 - 17658980
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||  |||||||||||||||||| ||| |||||||||||| || ||||||    
T  17659125 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggttttattgactgatgtttctctgctagattttgtttctgacaggtgg 17659026  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    ||||||||||  |||||| ||||||||||||| ||| | |||||||    
T  17659025 gtgtggttgcttgaccctattgagggttacactgtttgtggttcat 17658980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 45255675 - 45255817
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| || |||||||||||||| || |||||| |||||| |||||  || ||| ||||||||||||||||||||||||||||||| ||||||    
T  45255675 gtggaggaggaggttatgggcttgggaggaggaggagttagaggagt-tagggttttgttggctgatgtttctttgcaagattttgtttcagacaggtgg 45255773  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    |||||||||||||||||| ||||||| || || |||||||||||    
T  45255774 gtgtggttgccagaccctattgagggctatactgttcgcggttc 45255817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 272
Target Start/End: Complemental strand, 36157451 - 36157311
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| ||||||||||| |||||| ||||||||||| | ||| ||  ||||||||||||| | | |  | ||||||| | ||||    
T  36157451 gtggaggaggagtttgtgggcgtgggaggaagaggagttagaggagtgtaggactttactgcttgatgtttctttgtatgctaatatttcagacaagtgg 36157352  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcgg 272  Q
    || ||||| || ||||||  ||| || ||| ||||||||||    
T  36157351 gtttggttaccggacccttctgaagggtactcagttcgcgg 36157311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 20208565 - 20208708
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||| ||||||    
T  20208565 gtggaggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctctgcaagtttatgtttcagacaggtgg 20208664  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  20208665 gtgtggttgccagaccctgttgagggttacactgttcgcggttc 20208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 6049517 - 6049366
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| || | |||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||    
T  6049517 gtggaggaggaggttataggcttgggagaaggaggagttaaaggagtgtagggctttattgactgatgtttctttgcaagattttttttccgacaggtgg 6049418  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcact 283  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||| |||||    
T  6049417 gtgtggttgccagaccctgttaagggttatactgttcgcggttcatatcact 6049366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 4415546 - 4415691
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4415546 gtggaggaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattttgtttccgacaggtgg 4415645  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    |||||||||||||||||| | | ||||||| | ||||| |||||||    
T  4415646 gtgtggttgccagaccctttggtgggttactctgttcgtggttcat 4415691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 7000611 - 7000756
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    ||||| |||||| |||||| |||||||| | || |||||| ||||||||||||| ||||||| |||||||||| ||| ||||| ||||||||| | ||||    
T  7000611 gtggaagaggaggttgtggtcttgggagaaggaggagttagaggagtgtagggctttattgattgatgtttctctgctagattctgtttcagacaagtgg 7000710  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    |||||||||||||||||   |||||||||||| |||||||||||||    
T  7000711 gtgtggttgccagaccccactgagggttacactgttcgcggttcat 7000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 132 - 283
Target Start/End: Complemental strand, 47537562 - 47537411
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||||||||||| ||| ||||||    
T  47537562 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttttctgctagattttgttttagacaggtgg 47537463  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcact 283  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  47537462 gtgtggttgccagaccctgttgagggttacactgttcgtggttcatatcact 47537411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 26846161 - 26846018
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||| ||||||| |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||| ||||||    
T  26846161 gtgggggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctctgcaagtttctgtttcagacaggtgg 26846062  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  26846061 gtgtggttgcctgaccctgttgagggttacactgttcgcggttc 26846018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 48192093 - 48191943
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  48192093 gtggaggaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattttgtttccgacaggtgg 48191994  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||| ||||||||| | | ||||||| | ||||| ||||||| ||||    
T  48191993 gtgtggtttccagaccctttggtgggttactctgttcgtggttcatatcac 48191943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 50544515 - 50544375
Alignment:
Q  135 gaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgggtg 234  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||| | | |||||||||||||||||| ||||||| ||||||||||| || ||||||    
T  50544515 gaggaggaggttgtgggcttgggaggaagaggagttagaggagtgtatgactttattgactgatgtttctctgcaagaatttgtttcagacagatgggtg 50544416  T
Q  235 tggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||| |||||||||||| |||||||||| |||||||||||||    
T  50544415 tggctgccagaccctggtgagggttactcagttcgcggttc 50544375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 33121235 - 33121313
Alignment:
Q  204 tttgcaagattttgtttcagataggtgggtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| || |||||||||||||||||||||||| | | ||||||| | ||||| ||||||| ||||    
T  33121235 tttgcaagattttgtttccgacaggtgggtgtggttgccagaccctttggtgggttactctgttcgtggttcatatcac 33121313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 43121512 - 43121622
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    ||||||| || |||||||||| |||||||| || ||||||||||| |||||| | ||||||  |||||||||| |||| | |  ||||||||| | ||||    
T  43121512 gtggaggcggggattgtgggcgtgggaggaggaggagttaaaggaatgtaggactttattgcttgatgtttctctgcatgctaatgtttcagacaagtgg 43121611  T
Q  232 gtgtggttgcc 242  Q
    || ||||||||    
T  43121612 gtttggttgcc 43121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 23818863 - 23818763
Alignment:
Q  140 ggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgggtgtggtt 239  Q
    ||||||||||||| |||||||| || |||||| |||| |||| | | ||||||  ||||||||||||||| | |  ||||||||| |||||||| |||||    
T  23818863 ggagattgtgggcgtgggaggaggaggagttagaggaatgtatgactttattgcttgatgtttctttgcatgttaatgtttcagacaggtgggtttggtt 23818764  T
Q  240 g 240  Q
    |    
T  23818763 g 23818763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 19222260 - 19222299
Alignment:
Q  220 tcagataggtgggtgtggttgccagaccctgttgagggtt 259  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  19222260 tcagacaggtgggtgtggttgccagaccctgttgagggtt 19222299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 27924921 - 27924989
Alignment:
Q  141 gagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgca 209  Q
    ||||||||||||||||||||| || | |||| ||||||||| | | ||||||  |||||||||||||||    
T  27924921 gagattgtgggcttgggaggaggaggtgttagaggagtgtaagactttattgcttgatgtttctttgca 27924989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 7e-49; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 17079037 - 17079187
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||    
T  17079037 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagcgtagggctttattgactgatgtttctttgcaagattttgtttcagacaagtgg 17079136  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||| |||||||||||| || ||||| ||||||| ||||    
T  17079137 gtgtggttgccagaccttgttgagggttatactgttcgtggttcatatcac 17079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 17873664 - 17873807
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || || ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  17873664 gtggaggaggaggttgtgggcatgggaggaggaggaattagaggagtgtagggctttattgactgatgtttctctgcaagattttgtttcagacaggtgg 17873763  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    |||||||||||||| ||| || |||||||||| |||||||||||    
T  17873764 gtgtggttgccagatcctattcagggttacactgttcgcggttc 17873807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 18051295 - 18051438
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| ||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  18051295 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactaatgtttatttgcaagattttatttcagacaggtgg 18051394  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||| | |||||||||||||||||||| ||||| |||||    
T  18051395 gtgtggttgtctgaccctgttgagggttacactgttcgtggttc 18051438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 9199098 - 9199243
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| ||  ||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||    
T  9199098 gtggaggaggaggttgtgggcttgggaggaggagaagttagaggagtgtagggcattattgactgatgtttctttgcgagattctgtttcagacaggtgg 9199197  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    || ||||||||||||| | ||| ||||||| | |||||||||||||    
T  9199198 gtttggttgccagaccatattgtgggttactctgttcgcggttcat 9199243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 11060708 - 11060848
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| ||   |||| ||||||||||||  |||||||||||| ||||| ||| ||||| |||||| || ||||||    
T  11060708 gtggaggaggaggttgtgggcttgggaggagga---gttagaggagtgtagggatttattgactgatatttctctgctagattatgtttctgacaggtgg 11060804  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||    
T  11060805 gtgtggttgcctgacccttttgagggttacactgttcgcggttc 11060848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 649912 - 650000
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgttt 220  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  649912 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgcaagattttgttt 650000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 17708273 - 17708123
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  17708273 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagacagatgg 17708174  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||| ||||| ||| ||||||| | ||||| ||||||| ||||    
T  17708173 gtgtggttgccaaacccttttgtgggttactctgttcgtggttcatatcac 17708123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 10711007 - 10711152
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||||||||| || || |||||| ||||||||||| | ||||| |||||||||||||| ||||||||||||||||| ||||||    
T  10711007 gtggaggaggaggttgtgggcttgggaagaggaggagttagaggagtgtaggactttattaactgatgtttctttccaagattttgtttcagacaggtgg 10711106  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  10711107 gtgtggttgccagaccctgttgagggttacactgttcgtggttcat 10711152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 132 - 283
Target Start/End: Original strand, 47106527 - 47106677
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| || |||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  47106527 gtggaggaggaggttatgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgcaagattttgtttccgacaggtgg 47106626  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcact 283  Q
    |||||||||||||||||||||||||| |  || ||||||||||||| |||||    
T  47106627 gtgtggttgccagaccctgttgaggggt-tactgttcgcggttcatatcact 47106677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 30110771 - 30110921
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |  ||||||||||||||| | ||||||||||||||||||||||||    
T  30110771 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggcttctttgactgatgtttctctacaagattttgtttcagataggtgg 30110870  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||| ||||||||| ||||||| ||||||||||| ||||||| ||||    
T  30110871 gtgtggttaccagacccttttgaggggtacacagttcggggttcatatcac 30110921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 26720921 - 26720812
Alignment:
Q  166 gagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgggtgtggttgccagaccctgttgagggttacacag 265  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||| |    
T  26720921 gagttagaggagtgtagggctttattgactgatgtttctctgcaagtttttgtttcagacaggtgggtgtggtcgtcagaccctgttgagggttacactg 26720822  T
Q  266 ttcgcggttc 275  Q
    ||||||||||    
T  26720821 ttcgcggttc 26720812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 21335216 - 21335357
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||| | | ||||||  ||||||||||||||| | |  ||||||||| ||||||    
T  21335216 gtggaggcggagattgtgggcttgggaggaagaggagttagaggagtgtaagactttattgcttgatgtttctttgcaggctaatgtttcagacaggtgg 21335315  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggt 273  Q
    || |||||||  |||||| |||| || ||| |||||||||||    
T  21335316 gtatggttgcaggacccttttgaagggtactcagttcgcggt 21335357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 28097809 - 28097916
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    ||||||||||||| ||||||  ||||||||||| |||| | |||||||||||   ||||||  |||||||| |||| | | |  ||||||||||||||||    
T  28097809 gtggaggaggagactgtgggggtgggaggaagaggagtaagaggagtgtaggaatttattgcttgatgtttatttgtatgctaatgtttcagataggtgg 28097908  T
Q  232 gtgtggtt 239  Q
    || |||||    
T  28097909 gtttggtt 28097916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 1380376 - 1380231
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1380376 gtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtaaggccttattgactgatgtttctttgcaagattatgtttcagataggtgg 1380277  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcat 277  Q
    || ||||||||||| ||| ||| ||||||| | |||||||||||||    
T  1380276 gtttggttgccagatcctattgtgggttactctgttcgcggttcat 1380231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 2999594 - 2999744
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  2999594 gtggaggaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggccttattgactgatgtttctttgcaagattttgtttccgacaggtgg 2999693  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| | | ||||||| | ||||  ||||||| ||||    
T  2999694 gtgtggttgccagaccctttggtgggttactctgttcttggttcatatcac 2999744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 11028164 - 11028063
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    ||||||||||||| | | ||  ||||||||||| |||||| ||||||||||| | ||||||  ||||||||||||| | | |  ||||||||| ||||||    
T  11028164 gtggaggaggagactatcggtgtgggaggaagaggagttagaggagtgtaggactttattgcgtgatgtttctttgtatgctaatgtttcagacaggtgg 11028065  T
Q  232 gt 233  Q
    ||    
T  11028064 gt 11028063  T

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Target: scaffold0179 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 7822 - 7679
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||| ||||||    
T  7822 gtggaggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctctgcaagtttctgtttcagacaggtgg 7723  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  7722 gtgtggttgcctgaccctgttgagggttacactgttcgcggttc 7679  T

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Target: scaffold0179; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 12756 - 12613
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||| ||||||| |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||| ||||||    
T  12756 gtggtggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctctgcaagtttctgtttcagacaggtgg 12657  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  12656 gtgtggttgcctgaccctgttgagggttacactgttcgcggttc 12613  T

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Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 4077569 - 4077426
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||  |||||| ||||||||||||||||| ||||| ||||||    
T  4077569 gtggaggaggaggttgtgggcttgggaggaagaggagttagaggagtgtagggctttattgtttgatgtgtctttgcaagattttgtgtcagacaggtgg 4077470  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    |||||||||| |||||||| |||||| || ||||||||||||||    
T  4077469 gtgtggttgctagaccctgctgagggctatacagttcgcggttc 4077426  T

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Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 34231993 - 34231843
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||| ||||| |||||||| |||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  34231993 gtggagtaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggccttattgaatgatgtttctttgcaagattttgtttccgacaggtgg 34231894  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttcatctcac 282  Q
    |||||||||||||||||| | |  |||||| | ||||| ||||||| ||||    
T  34231893 gtgtggttgccagaccctttggtaggttactctgttcgtggttcatatcac 34231843  T

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Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 7458517 - 7458660
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagattttgtttcagataggtgg 231  Q
    |||||||||||| |||||||| |||||||| || || ||| ||||||||||||| ||||| ||| |||||||| ||||||||| |||||| || ||||||    
T  7458517 gtggaggaggaggttgtgggcatgggaggaggaggaattagaggagtgtagggctttattaactaatgtttctctgcaagattctgtttccgacaggtgg 7458616  T
Q  232 gtgtggttgccagaccctgttgagggttacacagttcgcggttc 275  Q
    |||||||||||||| ||| || |||||||||| |||||||||||    
T  7458617 gtgtggttgccagatcctattcagggttacactgttcgcggttc 7458660  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 36228010 - 36228049
Alignment:
Q  146 tgtgggcttgggaggaagatgagttaaaggagtgtagggc 185  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  36228010 tgtgggcgtgggaggaagatgtgttaaaggagtgtagggc 36228049  T

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Target: scaffold0912 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 2719 - 2799
Alignment:
Q  132 gtggaggaggagattgtgggcttgggaggaagatgagttaaaggagtgtagggccttattgactgatgtttctttgcaagat 213  Q
    |||||||||||| |||||||||||| |||| || |||||| |||||| |||||| |||||||||||||||||||||||||||    
T  2719 gtggaggaggaggttgtgggcttgg-aggaggaggagttagaggagtatagggctttattgactgatgtttctttgcaagat 2799  T

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