View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7867_low_2 (Length: 617)
Name: NF7867_low_2
Description: NF7867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7867_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 524; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 22 - 598
Target Start/End: Complemental strand, 37136632 - 37136056
Alignment:
| Q |
22 |
atggattggtgttgtgattattagcagaaccagagttgttctctagaagattataatcataatggtttggatcatcaatcttcttagggtaacaagaaga |
121 |
Q |
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| T |
37136632 |
atggattggtgttgtgattgttagcagaaccagagttgttctctagaagattataatcataatggtttggatcatcaatcttcttagggtaacaagaaga |
37136533 |
T |
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| Q |
122 |
taagagtaaagaaaatgataatgatgaagaagataaaggttgatgttgtagttgcaatagtttatcattgtatgcaatagcttctgcttggatttctgga |
221 |
Q |
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| T |
37136532 |
taagagtaaagaaaatgataatgatgaagaagataaaggttgatgttgtagttgcaatagtttatcattgtatgcaatagcttctgcttggatttctgga |
37136433 |
T |
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| Q |
222 |
ggataaagaggtaagccggctctttgacaccttttcattcttgtgttccaaaagtttttgatttcgttatctgttcttccgggcaactgaaaaaataaca |
321 |
Q |
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| T |
37136432 |
ggataaagaggtaagccggctctttgacgccttttcattcttgtgttccaaaagtttttgatttcgttatctgttcttccgggcaactgaaaaaacaaca |
37136333 |
T |
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| Q |
322 |
aaacattttcaggtgctcggaaaaagannnnnnnataaacaaatgttaatagttaatttgtgtgcagtaaagatcgaattgaactcttaatactttatcg |
421 |
Q |
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| T |
37136332 |
aaacattttcaggtgctcggagaaagatttttttataaacaaatgttaatagttaatttgtttgcagtaaagatcgaattgaactcttaatactttaccg |
37136233 |
T |
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| Q |
422 |
agaaacaataaacaagttctaccaagcaaacttctcaacaaataatttgtatcaagcaaagtacacaaaagacataaagatgagtattttagccttaaat |
521 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
37136232 |
agaaacaataaacaagttctaccaagcaaacttctcaacaaataatttgtatcaagcaaagtacacaaaagacataaagatgagtattttaaccttaaat |
37136133 |
T |
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| Q |
522 |
gagagcttttagaaagtagggcacatatttgaaagaaagaaacaaaaatggcaatttgatattcagacaatgattga |
598 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
37136132 |
gagagcttttagaaagtagggcacatatttgaaagaaacaaacaaaaatggcaatttgatattcagacaatgattga |
37136056 |
T |
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