View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7871_low_8 (Length: 427)
Name: NF7871_low_8
Description: NF7871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7871_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 6 - 409
Target Start/End: Complemental strand, 40078504 - 40078119
Alignment:
| Q |
6 |
aatacttataaatttgacatagttccaaaaataaagatcaaaataatacatcaaaatttgggggaccattgacgaatgttgtcatattttgaagaccaaa |
105 |
Q |
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| T |
40078504 |
aatacttataaatttgacatagttccaaaaataaagatcaaaataatacatcaaaatttgggggaccattgacgaatgttgtcatattttgaagaccaaa |
40078405 |
T |
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| Q |
106 |
atatacttttatctttttcaaaattcaacaagaaattttcaataaaatgcatgatatatactccttgcatgatataaagcttggtagtgcactatattat |
205 |
Q |
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| T |
40078404 |
atatacttttatctttttcaaaattcaacaagaaattttcaataaaatgcatgata------------------taaagcttggtagtgcactatattat |
40078323 |
T |
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| Q |
206 |
tttttgacaaattatattgcatacaattaatggaaattattatatatagtagcaataataatatagtgtaattagttaagttttttccttgccatatatt |
305 |
Q |
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| T |
40078322 |
tttttgacaaattatattgcatataattaatggaaattattatatatagtagcaataataatatagtgtaattagttaagttttttccttgccatatatt |
40078223 |
T |
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| Q |
306 |
atttacttacaataatctcagcaacaactctgggttgacgaaggggtttgaggaagaaggcgagggtgcggctaacaaacatgactagaatggtttgaat |
405 |
Q |
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| T |
40078222 |
atttacttacaataatctcagcaacaactctgggttgacgaaggggtttgaggaagaaggcgagggtgcggctaacaaacatgactagaatggtttgaat |
40078123 |
T |
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