View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7872_low_10 (Length: 270)

Name: NF7872_low_10
Description: NF7872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7872_low_10
NF7872_low_10
[»] chr2 (40 HSPs)
chr2 (1-178)||(44469028-44469202)
chr2 (184-255)||(561634-561705)
chr2 (188-255)||(4381798-4381865)
chr2 (184-255)||(30486209-30486280)
chr2 (183-255)||(6580187-6580259)
chr2 (183-255)||(26891779-26891851)
chr2 (188-255)||(3668229-3668295)
chr2 (184-255)||(27856512-27856583)
chr2 (185-255)||(20552931-20553001)
chr2 (185-255)||(31438646-31438716)
chr2 (182-255)||(32360985-32361058)
chr2 (185-254)||(44587902-44587971)
chr2 (184-255)||(31390011-31390082)
chr2 (185-255)||(43637165-43637234)
chr2 (182-255)||(22887747-22887820)
chr2 (184-252)||(22068438-22068506)
chr2 (184-255)||(38590990-38591061)
chr2 (184-255)||(2898071-2898141)
chr2 (184-255)||(22567601-22567672)
chr2 (184-255)||(32860101-32860172)
chr2 (182-255)||(1859159-1859232)
chr2 (188-255)||(5881221-5881287)
chr2 (185-255)||(8969523-8969591)
chr2 (184-255)||(26387180-26387251)
chr2 (184-255)||(34442648-34442718)
chr2 (175-244)||(44854467-44854536)
chr2 (185-245)||(44854310-44854369)
chr2 (184-255)||(4022595-4022665)
chr2 (186-244)||(29771417-29771476)
chr2 (184-223)||(35851917-35851956)
chr2 (182-255)||(34123140-34123213)
chr2 (185-248)||(28012077-28012140)
chr2 (188-252)||(28600971-28601034)
chr2 (212-255)||(5093655-5093698)
chr2 (188-247)||(25782954-25783012)
chr2 (191-221)||(4022485-4022515)
chr2 (184-252)||(20252739-20252808)
chr2 (216-253)||(27584769-27584806)
chr2 (182-223)||(35470368-35470409)
chr2 (185-254)||(38296178-38296246)
[»] chr5 (29 HSPs)
chr5 (185-255)||(35504356-35504426)
chr5 (184-254)||(35132521-35132591)
chr5 (185-255)||(10069969-10070039)
chr5 (185-255)||(34650949-34651018)
chr5 (184-255)||(10054468-10054539)
chr5 (184-255)||(13661807-13661878)
chr5 (184-255)||(8787338-8787409)
chr5 (185-255)||(11958083-11958153)
chr5 (188-255)||(19647774-19647841)
chr5 (184-255)||(39069380-39069450)
chr5 (185-255)||(12506296-12506366)
chr5 (184-255)||(13470150-13470221)
chr5 (188-254)||(11846075-11846141)
chr5 (185-255)||(21547510-21547579)
chr5 (186-255)||(2619673-2619742)
chr5 (184-255)||(4837257-4837327)
chr5 (184-255)||(31909631-31909701)
chr5 (185-255)||(6283562-6283632)
chr5 (185-255)||(9721723-9721793)
chr5 (186-255)||(20175228-20175297)
chr5 (183-255)||(40564520-40564590)
chr5 (185-244)||(40608662-40608722)
chr5 (184-238)||(21944994-21945048)
chr5 (208-253)||(19436954-19436999)
chr5 (208-255)||(6284818-6284865)
chr5 (218-252)||(40057340-40057374)
chr5 (191-223)||(1919621-1919653)
chr5 (190-222)||(14214054-14214086)
chr5 (182-222)||(20983517-20983557)
[»] scaffold0003 (1 HSPs)
scaffold0003 (183-255)||(53801-53873)
[»] chr6 (36 HSPs)
chr6 (183-255)||(27433490-27433562)
chr6 (185-255)||(392096-392166)
chr6 (184-255)||(3515765-3515836)
chr6 (184-255)||(20897947-20898018)
chr6 (184-255)||(34396643-34396714)
chr6 (184-254)||(12525718-12525788)
chr6 (187-255)||(2350654-2350722)
chr6 (184-255)||(4215694-4215765)
chr6 (184-255)||(32929624-32929695)
chr6 (184-255)||(7851275-7851346)
chr6 (184-255)||(23402137-23402208)
chr6 (185-255)||(12145233-12145303)
chr6 (185-255)||(21878463-21878533)
chr6 (182-255)||(31280318-31280391)
chr6 (185-254)||(35043890-35043959)
chr6 (183-255)||(29451231-29451302)
chr6 (184-255)||(18276731-18276801)
chr6 (185-255)||(29978233-29978302)
chr6 (184-255)||(3026125-3026194)
chr6 (183-255)||(13529453-13529525)
chr6 (184-255)||(1391294-1391364)
chr6 (188-255)||(32985309-32985376)
chr6 (201-255)||(34477666-34477719)
chr6 (189-255)||(34851965-34852030)
chr6 (185-255)||(2580952-2581022)
chr6 (185-255)||(23629692-23629761)
chr6 (207-255)||(26467240-26467288)
chr6 (185-255)||(13417078-13417148)
chr6 (185-255)||(28225221-28225290)
chr6 (187-255)||(9660988-9661056)
chr6 (185-244)||(34712252-34712312)
chr6 (199-254)||(11115212-11115267)
chr6 (184-255)||(14559921-14559992)
chr6 (215-254)||(25165530-25165569)
chr6 (184-244)||(34706719-34706780)
chr6 (227-255)||(961051-961079)
[»] chr4 (44 HSPs)
chr4 (183-255)||(18067995-18068067)
chr4 (184-254)||(15186242-15186312)
chr4 (183-255)||(4268938-4269010)
chr4 (184-255)||(789646-789717)
chr4 (184-255)||(43944506-43944577)
chr4 (184-255)||(7768937-7769008)
chr4 (184-255)||(16536047-16536118)
chr4 (184-255)||(43202499-43202570)
chr4 (185-255)||(54897308-54897378)
chr4 (183-255)||(4089140-4089212)
chr4 (184-254)||(12356243-12356313)
chr4 (185-255)||(32217045-32217115)
chr4 (184-255)||(29591188-29591259)
chr4 (184-255)||(47231988-47232059)
chr4 (184-255)||(52533901-52533972)
chr4 (185-255)||(28755621-28755690)
chr4 (185-255)||(32202596-32202666)
chr4 (185-255)||(54054548-54054618)
chr4 (186-254)||(19503222-19503289)
chr4 (184-255)||(33108789-33108859)
chr4 (184-255)||(37987935-37988005)
chr4 (185-255)||(3783617-3783687)
chr4 (185-255)||(24679758-24679827)
chr4 (183-255)||(42898862-42898934)
chr4 (188-255)||(50619089-50619156)
chr4 (185-255)||(4220195-4220265)
chr4 (185-255)||(54655992-54656062)
chr4 (187-223)||(22225894-22225930)
chr4 (183-255)||(55882682-55882753)
chr4 (182-244)||(10110128-10110191)
chr4 (212-255)||(54945894-54945937)
chr4 (212-254)||(1432659-1432701)
chr4 (184-233)||(46688348-46688397)
chr4 (183-255)||(50167589-50167659)
chr4 (215-255)||(39843937-39843977)
chr4 (183-255)||(49915157-49915229)
chr4 (184-255)||(6164093-6164163)
chr4 (184-255)||(41265458-41265529)
chr4 (184-254)||(5091727-5091797)
chr4 (225-255)||(30154279-30154309)
chr4 (209-255)||(31680579-31680625)
chr4 (225-255)||(36395139-36395169)
chr4 (213-255)||(42815137-42815179)
chr4 (209-255)||(53655994-53656040)
[»] chr3 (37 HSPs)
chr3 (184-255)||(52520680-52520751)
chr3 (185-255)||(39074419-39074489)
chr3 (182-255)||(272217-272290)
chr3 (183-255)||(49893329-49893401)
chr3 (184-255)||(46352633-46352704)
chr3 (185-255)||(43786871-43786941)
chr3 (185-254)||(20923992-20924061)
chr3 (185-255)||(48725271-48725341)
chr3 (182-255)||(41304002-41304075)
chr3 (185-255)||(53489940-53490012)
chr3 (184-255)||(18014671-18014742)
chr3 (185-255)||(4168183-4168253)
chr3 (191-255)||(50395678-50395742)
chr3 (184-255)||(858588-858659)
chr3 (189-255)||(7468417-7468481)
chr3 (184-255)||(40362696-40362767)
chr3 (185-255)||(10617400-10617469)
chr3 (185-255)||(28139309-28139379)
chr3 (185-255)||(52246582-52246652)
chr3 (184-254)||(52718167-52718236)
chr3 (183-255)||(41554056-41554127)
chr3 (184-255)||(11308326-11308397)
chr3 (185-255)||(2119431-2119501)
chr3 (184-254)||(13159896-13159966)
chr3 (185-245)||(2362801-2362861)
chr3 (185-255)||(23925280-23925350)
chr3 (186-255)||(42964365-42964434)
chr3 (187-255)||(43269855-43269923)
chr3 (212-255)||(2391634-2391677)
chr3 (212-255)||(2393395-2393438)
chr3 (185-252)||(2505350-2505416)
chr3 (185-255)||(27994416-27994486)
chr3 (185-250)||(38852216-38852279)
chr3 (212-252)||(22248913-22248953)
chr3 (188-255)||(50359302-50359368)
chr3 (217-255)||(29241669-29241707)
chr3 (191-223)||(23516589-23516621)
[»] chr1 (50 HSPs)
chr1 (176-255)||(29210404-29210483)
chr1 (184-255)||(42770106-42770177)
chr1 (183-255)||(29657769-29657841)
chr1 (184-255)||(18043161-18043232)
chr1 (184-255)||(51065864-51065935)
chr1 (185-255)||(17333398-17333467)
chr1 (187-255)||(38702049-38702117)
chr1 (184-255)||(14350393-14350464)
chr1 (185-255)||(24178579-24178649)
chr1 (185-255)||(38162850-38162920)
chr1 (188-255)||(12072178-12072245)
chr1 (184-255)||(15227738-15227809)
chr1 (184-255)||(51368901-51368972)
chr1 (185-255)||(5694321-5694391)
chr1 (182-255)||(45431276-45431348)
chr1 (184-255)||(29683194-29683266)
chr1 (184-255)||(9266844-9266915)
chr1 (182-253)||(19031933-19032004)
chr1 (184-255)||(30657607-30657678)
chr1 (188-255)||(43286725-43286792)
chr1 (184-255)||(47009992-47010063)
chr1 (185-255)||(3784829-3784899)
chr1 (185-255)||(30294497-30294567)
chr1 (178-255)||(13961205-13961281)
chr1 (186-255)||(19011112-19011180)
chr1 (192-255)||(6770344-6770407)
chr1 (185-255)||(3097659-3097729)
chr1 (184-244)||(28726032-28726093)
chr1 (188-251)||(14881086-14881149)
chr1 (184-255)||(35985737-35985807)
chr1 (185-255)||(38335170-38335239)
chr1 (177-255)||(48071475-48071552)
chr1 (187-255)||(23473580-23473648)
chr1 (187-255)||(36446441-36446508)
chr1 (185-244)||(38595879-38595939)
chr1 (188-244)||(48383238-48383294)
chr1 (185-248)||(28481844-28481907)
chr1 (184-255)||(47532786-47532856)
chr1 (184-255)||(52749601-52749672)
chr1 (184-250)||(41730304-41730370)
chr1 (186-255)||(10976018-10976087)
chr1 (213-254)||(15282631-15282672)
chr1 (185-244)||(52702272-52702332)
chr1 (184-255)||(39912395-39912466)
chr1 (182-223)||(19940684-19940725)
chr1 (218-255)||(39497340-39497377)
chr1 (203-255)||(3838893-3838945)
chr1 (215-255)||(8473030-8473070)
chr1 (191-223)||(12377219-12377251)
chr1 (184-255)||(26228194-26228263)
[»] chr8 (47 HSPs)
chr8 (185-255)||(30675688-30675758)
chr8 (187-255)||(20831669-20831737)
chr8 (184-255)||(168465-168536)
chr8 (186-255)||(21595848-21595916)
chr8 (184-255)||(11112638-11112709)
chr8 (188-255)||(13643015-13643082)
chr8 (188-255)||(13743440-13743507)
chr8 (184-255)||(27988615-27988686)
chr8 (184-255)||(28045917-28045988)
chr8 (184-255)||(33357245-33357316)
chr8 (185-255)||(2805376-2805446)
chr8 (185-255)||(12652630-12652700)
chr8 (185-255)||(34228682-34228752)
chr8 (185-255)||(37373206-37373275)
chr8 (186-255)||(16888660-16888728)
chr8 (183-255)||(12203853-12203924)
chr8 (183-255)||(12448281-12448352)
chr8 (184-255)||(4537860-4537931)
chr8 (185-255)||(16394177-16394247)
chr8 (182-255)||(43119214-43119287)
chr8 (184-255)||(9063168-9063238)
chr8 (184-254)||(4648194-4648263)
chr8 (188-253)||(29444258-29444323)
chr8 (182-255)||(36730442-36730514)
chr8 (198-255)||(42035097-42035154)
chr8 (184-255)||(9278211-9278282)
chr8 (184-255)||(16785086-16785156)
chr8 (182-255)||(3930349-3930421)
chr8 (188-255)||(10618021-10618088)
chr8 (213-255)||(9537940-9537982)
chr8 (185-255)||(32113908-32113978)
chr8 (185-238)||(39751605-39751658)
chr8 (204-255)||(9254017-9254068)
chr8 (185-252)||(36923782-36923849)
chr8 (217-255)||(16890596-16890634)
chr8 (185-255)||(29235235-29235305)
chr8 (184-255)||(40831280-40831347)
chr8 (184-255)||(7304634-7304702)
chr8 (185-244)||(29566700-29566760)
chr8 (184-223)||(6254286-6254325)
chr8 (188-255)||(17467606-17467673)
chr8 (216-255)||(28626799-28626838)
chr8 (185-223)||(23722248-23722286)
chr8 (184-245)||(2490315-2490376)
chr8 (182-223)||(26491573-26491614)
chr8 (187-223)||(7261954-7261990)
chr8 (187-219)||(9254069-9254101)
[»] chr7 (42 HSPs)
chr7 (184-255)||(34333283-34333354)
chr7 (185-255)||(24438477-24438547)
chr7 (183-255)||(5239283-5239355)
chr7 (184-255)||(12218552-12218623)
chr7 (184-255)||(29993603-29993674)
chr7 (186-255)||(28587911-28587979)
chr7 (184-255)||(18485960-18486031)
chr7 (184-255)||(24798519-24798589)
chr7 (184-254)||(4628565-4628635)
chr7 (185-255)||(34606261-34606331)
chr7 (185-255)||(43594152-43594222)
chr7 (182-255)||(27456229-27456301)
chr7 (183-252)||(28262029-28262098)
chr7 (184-255)||(34546430-34546501)
chr7 (185-255)||(8754701-8754771)
chr7 (184-255)||(5729345-5729416)
chr7 (188-255)||(11686440-11686507)
chr7 (185-255)||(1736980-1737050)
chr7 (205-255)||(30810675-30810725)
chr7 (186-255)||(47656981-47657050)
chr7 (173-254)||(47839481-47839561)
chr7 (183-255)||(37631658-37631730)
chr7 (185-255)||(13064993-13065061)
chr7 (187-254)||(22973600-22973667)
chr7 (185-240)||(47118095-47118150)
chr7 (185-254)||(18470056-18470126)
chr7 (184-244)||(6097335-6097396)
chr7 (184-244)||(20402388-20402449)
chr7 (214-255)||(45045799-45045840)
chr7 (206-255)||(47083076-47083125)
chr7 (216-255)||(4100640-4100679)
chr7 (184-255)||(7689316-7689387)
chr7 (188-255)||(18117147-18117213)
chr7 (182-244)||(30924117-30924180)
chr7 (185-223)||(30703689-30703727)
chr7 (216-254)||(42044410-42044448)
chr7 (184-244)||(32805537-32805598)
chr7 (211-255)||(4087649-4087693)
chr7 (183-255)||(23357823-23357895)
chr7 (183-255)||(23363283-23363354)
chr7 (191-223)||(31320382-31320414)
chr7 (191-223)||(35791652-35791684)
[»] scaffold0014 (1 HSPs)
scaffold0014 (184-255)||(68406-68477)
[»] scaffold0264 (1 HSPs)
scaffold0264 (184-254)||(22960-23030)
[»] scaffold0188 (1 HSPs)
scaffold0188 (186-255)||(6226-6295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (188-255)||(116207-116274)
[»] scaffold0206 (1 HSPs)
scaffold0206 (182-255)||(11086-11157)
[»] scaffold0045 (2 HSPs)
scaffold0045 (185-255)||(50548-50618)
scaffold0045 (210-255)||(53462-53507)
[»] scaffold0190 (1 HSPs)
scaffold0190 (185-255)||(14896-14966)
[»] scaffold1152 (1 HSPs)
scaffold1152 (182-254)||(675-747)
[»] scaffold0674 (1 HSPs)
scaffold0674 (201-255)||(8013-8066)
[»] scaffold0549 (1 HSPs)
scaffold0549 (201-255)||(7305-7358)
[»] scaffold0002 (1 HSPs)
scaffold0002 (184-254)||(147022-147092)
[»] scaffold1266 (1 HSPs)
scaffold1266 (183-255)||(291-362)
[»] scaffold0034 (1 HSPs)
scaffold0034 (188-256)||(95699-95767)
[»] scaffold0524 (1 HSPs)
scaffold0524 (185-255)||(825-895)
[»] scaffold0038 (1 HSPs)
scaffold0038 (185-255)||(25719-25788)
[»] scaffold0050 (1 HSPs)
scaffold0050 (212-254)||(69253-69295)
[»] scaffold0007 (1 HSPs)
scaffold0007 (185-241)||(233864-233920)


Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 44469202 - 44469028
Alignment:
Q  1 actagagctcatatacttacaattcaaaaatttaattatgtcgagaatcatatttttt-gttagtctataaaagaaatacataatttaatttgagctcga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||||    
T  44469202 actagagctcatatacttacaattcaaaaatttaattatgtcgagaatcatatttttttgttagtctataaaagaaatacataattt----tgagctcga 44469107  T
Q  100 ttttttcttcatttatacctttaactcttaacttaaactacattatatgctattgtatccgttttattatattatttaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44469106 ttttttcttcatttatacctttaactcttaacttaaactacattatgtgctattgtatccgttttattatattatttaa 44469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 561705 - 561634
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  561705 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 561634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 4381798 - 4381865
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  4381798 aaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatg 4381865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 30486209 - 30486280
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  30486209 agggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 30486280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 6580187 - 6580259
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  6580187 tagggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagttaatg 6580259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 26891851 - 26891779
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||    
T  26891851 tagggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatg 26891779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 3668295 - 3668229
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  3668295 aaatgctaaccggtgcccccgg-acactggttaagggtatggaaaaggaaattatatagtagttaatg 3668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 27856583 - 27856512
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  27856583 agggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatg 27856512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 20552931 - 20553001
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 20553001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 31438646 - 31438716
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatg 31438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 32361058 - 32360985
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||| |||||||||    
T  32361058 ttagggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatg 32360985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 44587902 - 44587971
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaat 44587971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 31390011 - 31390082
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  31390011 agggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagttaatg 31390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 43637165 - 43637234
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||    
T  43637165 gggaaatgctaaccggtgcccc-gagacactggttaaggatatgaataaggaaattatatagtagttaatg 43637234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 22887747 - 22887820
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| |||| ||||| || ||||||||| ||||||||| |||||||||||||||||||||    
T  22887747 ttagggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatg 22887820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 22068506 - 22068438
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  22068506 agggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagggaattatatagtagtta 22068438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 38591061 - 38590990
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| ||| ||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  38591061 agggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatg 38590990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 2898071 - 2898141
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||| ||| || ||||||||||||| |||||||||| ||||||||||||||||||||    
T  2898071 agggaaatgttaaccggtgtccc-ggaacactggttaaggatatgaaaaagaaaattatatagtagttaatg 2898141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 22567601 - 22567672
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| | ||||||   |||||||||||||| ||||||||| |||||||||||||||||||||    
T  22567601 agggaaatgctaactgatgcccctaagacactggttaaggatatgaaaaaagaaattatatagtagttaatg 22567672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 32860101 - 32860172
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||||| ||| ||| |||||||| ||| |||||||||||||||||||| ||||||    
T  32860101 agggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatg 32860172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 1859159 - 1859232
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| ||||||||||||  | ||||||||| ||| ||||| |||||| ||||||||||||||    
T  1859159 ttagggaaatgctaactggtgcccccggggtaatggttaaggatataaaaaaagaaattgtatagtagttaatg 1859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 5881221 - 5881287
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| ||| | | ||| |||||||| |||||||||||||||||||||||||||||||    
T  5881221 aaatgctaaccggtgtcccggag-cacaggttaaggatatgaaaaaggaaattatatagtagttaatg 5881287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 8969591 - 8969523
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| ||||||| ||  |||| ||||||| |||||||||| ||||||||||||||||||||    
T  8969591 gggaaatgctaaccagtgccccggg--cactagttaaggatatgaaaaagaaaattatatagtagttaatg 8969523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 26387251 - 26387180
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||| |||    ||| ||||||| |||||||||||||||||||||||||||||||    
T  26387251 agggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagttaatg 26387180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 34442718 - 34442648
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| ||| |||  ||||||| |||||||||| | ||||||||||||||||||    
T  34442718 agggaaatgctaaccggtgccccgggg-cacatgttaaggatatgaaaaagaagattatatagtagttaatg 34442648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 44854536 - 44854467
Alignment:
Q  175 ttaaaagttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatat 244  Q
    |||||| | |||||||||||||||||| | |||||| |||||||||||| ||  ||||||||||||||||    
T  44854536 ttaaaaataagggaaatgctaaccggtactcccggggcactggttaaggataataaaaaggaaattatat 44854467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 44854310 - 44854369
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatata 245  Q
    |||||||||||||||||||||||||| | |||||||||| ||  |||||||||||||||||    
T  44854310 gggaaatgctaaccggtgcccccgggtc-ctggttaaggataataaaaaggaaattatata 44854369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 4022665 - 4022595
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| ||||||| ||||| |||| |||||  ||||||||| ||||||| |||||||||||||    
T  4022665 agggaaatgctaactggtgcccacgggatactgattaagaatatgaaaaaagaaatta-atagtagttaatg 4022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 29771417 - 29771476
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||| |||||||||| |||||||||||| | || ||||||||||||||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaaggataataaaaaaggaaattatat 29771476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 35851956 - 35851917
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35851956 agggaaatgctaaccggtgcccccggggcactggttaagg 35851917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 34123213 - 34123140
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| |||||  ||||||| ||  ||  ||||| ||||||||||| |||||||||    
T  34123213 ttagggaaatgctaaccggtgcctccggggtactggttgagcatactaaaaaagaaattatataatagttaatg 34123140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 28012140 - 28012077
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaagg-aaattatatagta 248  Q
    |||||||| ||||||||||||| |||| ||||||||||| ||| ||||||| |||||||||||||    
T  28012140 gggaaatgataaccggtgcccc-gggatactggttaaggatattaaaaaggaaaattatatagta 28012077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 28600971 - 28601034
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    ||||||||||| ||||||  ||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  28600971 aaatgctaaccagtgcccggggg-cactggttaaggatatgaaaaagggaattataaagtagtta 28601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 5093698 - 5093655
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||    
T  5093698 cactagttaaggatatgaaaaaggaaattaaatagtagttaatg 5093655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 25783012 - 25782954
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagt 247  Q
    |||||||||||||||||||  | ||||| ||||||  |||||||||||||||||||||||    
T  25783012 aaatgctaaccggtgccccaag-acactagttaagaatatgaaaaaggaaattatatagt 25782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 221
Target Start/End: Original strand, 4022485 - 4022515
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaa 221  Q
    |||||||||||||||||||||||||||||||    
T  4022485 tgctaaccggtgcccccgggacactggttaa 4022515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 20252739 - 20252808
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaa-aaaggaaattatatagtagtta 252  Q
    |||||||||||||| |||||| ||| |||||||||||| | | | || |||||||||||||| |||||||    
T  20252739 agggaaatgctaactggtgcctccgtgacactggttaaagatgtcaagaaaggaaattatattgtagtta 20252808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 27584769 - 27584806
Alignment:
Q  216 ggttaagggtatgaaaaaggaaattatatagtagttaa 253  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  27584769 ggttaaggatatgaaaagggaaattatatagtagttaa 27584806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 35470409 - 35470368
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||    
T  35470409 ttagggaaatgttaaccggtgcctccggggcactggttaagg 35470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 38296178 - 38296246
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||| |   ||| |||||||||| | |||||||||| ||||||||||||| |||||    
T  38296178 gggaaatgctaaccggtgtcttgggg-cactggttaaagatatgaaaaagaaaattatatagtaattaat 38296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 35504426 - 35504356
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 35504356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 35132521 - 35132591
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35132521 agggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaat 35132591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 10069969 - 10070039
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 10070039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 34651018 - 34650949
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34651018 gggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatatagtagttaatg 34650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 10054539 - 10054468
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||    
T  10054539 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatg 10054468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 13661807 - 13661878
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  13661807 agggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 13661878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 8787338 - 8787409
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  8787338 agggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatg 8787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 11958153 - 11958083
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| ||| |||||| | ||| |||||||||||||||||||||||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatg 11958083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 19647841 - 19647774
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||  | ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  19647841 aaatgctaaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 19647774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 39069380 - 39069450
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||  || || ||||||||||||||||| ||||||||||||||||||||||||||    
T  39069380 agggaaatgctaaccggtgcttccagggcactggttaagggtatg-aaaaggaaattatatagtagttaatg 39069450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 12506296 - 12506366
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| | ||  |||| |||||| ||||||||||||||||||||||||||||||||    
T  12506296 gggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagttaatg 12506366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 13470150 - 13470221
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||   ||| |||||||||||| ||||||||||||||| |||||||||| ||||    
T  13470150 agggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatg 13470221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 11846075 - 11846141
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||| ||||| |||||||||||| | ||||| ||| ||||||||||||||||||||||||||    
T  11846075 aaatgctaagcggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagttaat 11846141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 21547579 - 21547510
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| ||||||| ||  |||||||| ||| |||||||||||||||||||||||||||    
T  21547579 gggaaatgctaaccggtgtccccggg-catcggttaaggatataaaaaaggaaattatatagtagttaatg 21547510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 2619742 - 2619673
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| |||| | |||||||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  2619742 ggaaatgctaactggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagttaatg 2619673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 4837257 - 4837327
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||||| ||| ||| |||||||  |||||||||||||||||||||||| ||||||    
T  4837257 agggaaatgttaaccggtgccccgggg-caccggttaagaatatgaaaaaggaaattatatagtaattaatg 4837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 31909631 - 31909701
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||||||    
T  31909631 agggaaatgttaaccggtgcctccgg-atactggttaaggatattaaaagggaaattatatagtagttaatg 31909701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 6283562 - 6283632
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| ||||| |||| ||||| | |||||||||| |||||||||| || ||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatg 6283632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 9721793 - 9721723
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||||||| || ||||  ||||||||||  |||||||||||||||||||||||| ||||||    
T  9721793 gggaaatgttaaccggtgtcctcgggctactggttaagaatatgaaaaaggaaattatatagtaattaatg 9721723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 20175228 - 20175297
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||| | ||| ||||||||||||   ||| ||||| |||||||||||||||||||||    
T  20175228 ggaaatgctaaccggtgtctccgagacactggttaaaaatataaaaaaagaaattatatagtagttaatg 20175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 40564590 - 40564520
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| ||  ||||||  | |||||| | |||||||||||||||||||||||||||||    
T  40564590 tagggaaatgctaaccggtgtcc--gggacatcgattaaggatttgaaaaaggaaattatatagtagttaatg 40564520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 40608722 - 40608662
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||| ||||||||||||||||||| | || |||| |||||||||||    
T  40608722 gggaaatgctaaccggtgctcccgggacactggttaaggataataaaaagggaaattatat 40608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 21945048 - 21944994
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaa 238  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||    
T  21945048 agggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaa 21944994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 19436999 - 19436954
Alignment:
Q  208 gggacactggttaagggtatgaaaaaggaaattatatagtagttaa 253  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||    
T  19436999 gggacactcgttaaggatatgaaaaaggaaattatatagtggttaa 19436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 6284818 - 6284865
Alignment:
Q  208 gggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  6284818 gggacactggttaaggatactaaaaaggaaattatatagtaattaatg 6284865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 40057340 - 40057374
Alignment:
Q  218 ttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    |||||| ||||||||||||||||||||||||||||    
T  40057340 ttaaggatatgaaaaaggaaattatatagtagtta 40057374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 1919653 - 1919621
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||||||||| ||||||||||||    
T  1919653 tgctaaccggtgcccccggggcactggttaagg 1919621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 14214054 - 14214086
Alignment:
Q  190 atgctaaccggtgcccccgggacactggttaag 222  Q
    ||||||||||||||||||||||||| |||||||    
T  14214054 atgctaaccggtgcccccgggacaccggttaag 14214086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 20983517 - 20983557
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaag 222  Q
    |||||| |||||||||||||||||||||| |||||| ||||    
T  20983517 ttagggtaatgctaaccggtgcccccggggcactggataag 20983557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 53873 - 53801
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53873 tagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 53801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 27433490 - 27433562
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27433490 tagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 27433562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 392096 - 392166
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 3515765 - 3515836
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3515765 agggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 3515836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 20897947 - 20898018
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  20897947 agggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 20898018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 34396714 - 34396643
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  34396714 agggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatg 34396643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 12525718 - 12525788
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  12525718 agggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaat 12525788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 2350654 - 2350722
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 2350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 4215694 - 4215765
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  4215694 agggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatg 4215765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 32929695 - 32929624
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||||||    
T  32929695 agggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatg 32929624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 7851346 - 7851275
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||| ||||||    
T  7851346 agggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatg 7851275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 23402137 - 23402208
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  23402137 agggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 23402208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 12145303 - 12145233
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatg 12145233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 21878533 - 21878463
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| || || ||| |||||||| |||||||||||||||||||||||||||||||    
T  21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagttaatg 21878463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 31280318 - 31280391
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| |||| | ||||| ||||| | ||||||||||||||||||||||||||||||    
T  31280318 ttagggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagttaatg 31280391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 35043890 - 35043959
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||| |||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  35043890 gggaaatgctaactggtgtccacgggacactggttaaggatatgaaaaaagaaattatatagtagttaat 35043959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 29451302 - 29451231
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| |||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  29451302 tagggaaatgctaactggtgcctccggg-caccggttaaggatatgaaaaaggaaattatatagtagttaatg 29451231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 18276801 - 18276731
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  18276801 agggaaatgttaactggtgcccctggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 18276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 29978233 - 29978302
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||| ||||||    
T  29978233 gggaaatgctaaccggtgcctccgg-acactagttaaggatatgaaaaaggaaattatatagtatttaatg 29978302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 3026194 - 3026125
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||| ||  |||||||||||||||||||||| ||||||||| |||||||||||    
T  3026194 agggaaatgctaactggtgccccggg--cactggttaagggtatgaaaaatgaaattatacagtagttaatg 3026125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 13529453 - 13529525
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||  |||||  |||| |||||||||||| | |||||||||||||||||||||||||||||    
T  13529453 tagggaaatgctaacttgtgccttcggggcactggttaaggatgtgaaaaaggaaattatatagtagttaatg 13529525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 1391364 - 1391294
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| || |||  |||| |||||| |||||||||||||||||||||||||||||||    
T  1391364 agggaaatgctaaccggtgctccggggt-actgattaaggatatgaaaaaggaaattatatagtagttaatg 1391294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 32985376 - 32985309
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| ||||||||||| |||| || ||||||||| ||| |||||||||||||||||||||||||||    
T  32985376 aaatgcaaaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatg 32985309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 34477719 - 34477666
Alignment:
Q  201 tgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34477719 tgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 34477666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 34852030 - 34851965
Alignment:
Q  189 aatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| || ||||||||| |||| | |||||||||||||||||||||||||||||||    
T  34852030 aatgctaaccggtgctcctgggacactg-ttaaagatatgaaaaaggaaattatatagtagttaatg 34851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 2580952 - 2581022
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||  | |  ||||||||| | ||| |||||||||||||||||||||||||||    
T  2580952 gggaaatgctaaccggtgcccttgaggtactggttaatgatataaaaaaggaaattatatagtagttaatg 2581022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 23629761 - 23629692
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||| |||||| ||| ||||| |||||| |||||||||| ||||||||||||||||||||    
T  23629761 gggaaatgttaaccgatgccccgggg-cactgattaaggatatgaaaaagaaaattatatagtagttaatg 23629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 26467288 - 26467240
Alignment:
Q  207 cgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  26467288 cggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatg 26467240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 13417148 - 13417078
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||| | ||| | || |||| ||||||| ||||||||||||||||||||| |||||||||    
T  13417148 gggaaatgttaaccgataccctcagggcactagttaaggatatgaaaaaggaaattatatattagttaatg 13417078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 28225221 - 28225290
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||| | |||| || |||||||| ||||||||||| |||||||||||| ||||||    
T  28225221 gggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaagg-aattatatagtaattaatg 28225290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 9660988 - 9661056
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| || | |||  ||||||| ||||||||| ||||||| ||| |||||||||    
T  9660988 gaaatgctaaccggtgccctcgtggcaccagttaaggatatgaaaaaagaaattacataatagttaatg 9661056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 34712312 - 34712252
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||||||||| ||||| |||||||||||| | || |||| |||||||||||    
T  34712312 gggaaatgctaaccggtgcctccggggcactggttaaggataataaaaagggaaattatat 34712252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 11115267 - 11115212
Alignment:
Q  199 ggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||| ||||| | |||||||||||| ||| ||||||||||||||||| ||||||||    
T  11115267 ggtgtccccgaggcactggttaaggatataaaaaaggaaattatataatagttaat 11115212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 14559921 - 14559992
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||  ||||  |||| |||| | ||||||||| |||| |||||| |||||||||    
T  14559921 agggaaatgctaaccggtgccttcggggaactgattaaagatatgaaaaaagaaaatatataatagttaatg 14559992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 25165569 - 25165530
Alignment:
Q  215 tggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  25165569 tggttaaggatatgaaaaaagaaattatatagtagttaat 25165530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 34706719 - 34706780
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||||||| ||| ||| |||||||| | || |||| |||||||||||    
T  34706719 agggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagggaaattatat 34706780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 961051 - 961079
Alignment:
Q  227 tgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||    
T  961051 tgaaaaaggaaattatatagtagttaatg 961079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 18068067 - 18067995
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18068067 tagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 18067995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 15186242 - 15186312
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15186242 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaat 15186312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 4269010 - 4268938
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4269010 tagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatg 4268938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 789717 - 789646
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  789717 agggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatg 789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 43944506 - 43944577
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43944506 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 43944577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 7768937 - 7769008
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7768937 agggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 7769008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 16536047 - 16536118
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||    
T  16536047 agggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatg 16536118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 43202570 - 43202499
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  43202570 agggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatg 43202499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 54897308 - 54897378
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatg 54897378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 4089140 - 4089212
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  4089140 tagggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatg 4089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 12356243 - 12356313
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||    
T  12356243 agggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagttaat 12356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 32217045 - 32217115
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatg 32217115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 29591188 - 29591259
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||    
T  29591188 agggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatg 29591259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 47232059 - 47231988
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||| |||||||||    
T  47232059 agggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatg 47231988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 52533972 - 52533901
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||||    
T  52533972 agggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatg 52533901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 28755621 - 28755690
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  28755621 gggaaatgctaaccggtgtcccaggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 28755690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 32202666 - 32202596
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||||||| ||||||| ||| |||||||| ||| |||||||||||||||||||||||||||    
T  32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatg 32202596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 54054548 - 54054618
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||| ||| |||||||| ||||||||| ||||||||||| |||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatg 54054618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 19503289 - 19503222
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||| ||||||||    
T  19503289 ggaaatgctaaccggtgctcccgggt-actggttaaggatatgaaaaaggaaattatatactagttaat 19503222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 33108859 - 33108789
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||| ||||| |||||||||||  ||||||||||||||||||||| |||||||||    
T  33108859 agggaaatgttaaccggtgcctccggggcactggttaaga-tatgaaaaaggaaattatataatagttaatg 33108789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 37987935 - 37988005
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| |||||||||| || |||  | |||||||||||||||||||||||||||||||||||||||||    
T  37987935 agggaaatgttaaccggtgctccagggtaa-tggttaagggtatgaaaaaggaaattatatagtagttaatg 37988005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 3783687 - 3783617
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| ||||| ||| ||||||   ||||||||| |||||||||||||||||||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatg 3783617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 24679827 - 24679758
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| | | ||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtctcgggg-cactggttaaggatatgaaaaaagaaattatatagtagttaatg 24679758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 42898934 - 42898862
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| ||| ||||||  || || |||||||||||| ||| |||||||||||||||||||||||||||    
T  42898934 tagggaaatgttaatcggtgcttccagggcactggttaaggatataaaaaaggaaattatatagtagttaatg 42898862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 50619089 - 50619156
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| ||||| |||||| ||||| |||||  |||||||||| ||||||||||||||||||||    
T  50619089 aaatgctaactggtgctcccggggcactgattaagaatatgaaaaagaaaattatatagtagttaatg 50619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 4220195 - 4220265
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||| ||||  ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  4220195 gggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagttaatg 4220265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 54656062 - 54655992
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||| ||||  || ||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  54656062 gggaaatgttaactggtgttccgggggcactggttaaggatataaaaaaggaaattatatagtagttaatg 54655992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 22225930 - 22225894
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||||||||||||||||||||||||||    
T  22225930 gaaatgctaaccggtgcccccgggacactggttaagg 22225894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 55882682 - 55882753
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| | ||||| |||| ||||||| |||||||||  ||||||||||||| ||||||    
T  55882682 tagggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagtaattaatg 55882753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 10110191 - 10110128
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||||||| ||||||||||| |||||| | || |||| |||||||||||    
T  10110191 ttagggaaatgctaaccggtgcctccgggacactgattaaggataataaaaagggaaattatat 10110128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 54945937 - 54945894
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  54945937 cactggttaaggatatgaaaaaggaaattatatagcagttaatg 54945894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 1432701 - 1432659
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  1432701 cactggttaaggatatgaaaaaggaaattatataatagttaat 1432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 46688397 - 46688348
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaa 233  Q
    |||||||||||||| |||||||||| | |||||||||||| |||||||||    
T  46688397 agggaaatgctaactggtgcccccgaggcactggttaaggatatgaaaaa 46688348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 50167589 - 50167659
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||  | |||| |||||||||| | |||||||||| ||||  ||||||||||||||    
T  50167589 tagggaaatgctaaccggtgttctcggggcactggttaaagatatgaaaaagaaaat--tatagtagttaatg 50167659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 39843937 - 39843977
Alignment:
Q  215 tggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  39843937 tggttaaggatatgaaaaatgaaattatatagtagttaatg 39843977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 49915157 - 49915229
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||| |||||| ||||| ||  ||||| |||||| |||||||||| || |||||||||| ||||||    
T  49915157 tagggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagtaattaatg 49915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 6164093 - 6164163
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| |||||||||| |  ||| |||||||||||| ||| |||| | ||||||||||||||||||||    
T  6164093 agggaaatgataaccggtgctcttggggcactggttaaggatatcaaaa-gaaaattatatagtagttaatg 6164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 41265458 - 41265529
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||| ||||| |||||||||||| ||||||  ||  |||| | ||||||||||||||||||||    
T  41265458 agggaaatgttaatcggtgtccccgggacactagttaagcatactaaaatgaaaattatatagtagttaatg 41265529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 5091797 - 5091727
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||| ||||||||| | |||||| |||||||||||  |||||||||  |||||||||| || |||||    
T  5091797 agggaaatactaaccggtactcccggggcactggttaagaatatgaaaaataaaattatataataattaat 5091727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 255
Target Start/End: Complemental strand, 30154309 - 30154279
Alignment:
Q  225 tatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||||    
T  30154309 tatgaaaaaggaaattatatagtagttaatg 30154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 31680625 - 31680579
Alignment:
Q  209 ggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| || ||| ||| |||||||||    
T  31680625 ggacactggttaagggtatgaaaaagaaagttacataatagttaatg 31680579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 36395139 - 36395169
Alignment:
Q  225 tatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||||    
T  36395139 tatgaaaaaggaaattatatagtagttaatg 36395169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 42815137 - 42815179
Alignment:
Q  213 actggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||| ||||||||||||||||||||  |||||||||    
T  42815137 actggttaaggatatgaaaaaggaaattatatcatagttaatg 42815179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 53656040 - 53655994
Alignment:
Q  209 ggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||| ||||||| ||||||||| ||||||||||| |||||||||    
T  53656040 ggacacttgttaaggatatgaaaaaagaaattatataatagttaatg 53655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 52520680 - 52520751
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52520680 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 52520751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 39074419 - 39074489
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 39074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 272217 - 272290
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  272217 ttagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 272290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 49893329 - 49893401
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  49893329 tagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatg 49893401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 46352633 - 46352704
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  46352633 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatg 46352704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 43786871 - 43786941
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatg 43786941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 20923992 - 20924061
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagttaat 20924061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 48725271 - 48725341
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 48725341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 41304002 - 41304075
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||||||||||| ||||||    
T  41304002 ttagggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatg 41304075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 53490012 - 53489940
Alignment:
Q  185 gggaaatgctaaccggtgccccc--gggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53490012 gggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 53489940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 18014671 - 18014742
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||    
T  18014671 agggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatg 18014742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 4168183 - 4168253
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| |||||  ||||||||||| ||| |||||||||||||||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagttaatg 4168253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 50395742 - 50395678
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||||||| |||||||||||    
T  50395742 tgctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatg 50395678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 858588 - 858659
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| ||||||||||||| |  |||| ||||||| |||||||||||||||||||||||||||||||    
T  858588 agggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatg 858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 7468417 - 7468481
Alignment:
Q  189 aatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7468417 aatgctaaccgg--cccccgggacactggttaaggaaatgaaaaaggaaattatatagtagttaatg 7468481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 40362767 - 40362696
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| ||||| ||||| ||||| |||||| ||||||||| |||||||||||||||||||||    
T  40362767 agggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatg 40362696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 10617469 - 10617400
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||    
T  10617469 gggaaatgttaaccggtgcccccgg-acactgattaaggatataaaaaaggaaattatatagtagttaatg 10617400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 28139309 - 28139379
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||||||  |||||||||||||| ||||||||| ||||||| |||||||||||||    
T  28139309 gggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatg 28139379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 52246582 - 52246652
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||| ||||||||||||| |||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatg 52246652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 52718167 - 52718236
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||| |||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  52718167 agggaaatactaatcggtgctcccgg-acactggttaaggatatgaaaaaggaaattatatagtagttaat 52718236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 41554127 - 41554056
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| |||||||||| |||||||| | | |||||||||||| |||||||||||||||||||||||||||||||    
T  41554127 taggaaaatgctaactggtgccccggtg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 41554056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 11308397 - 11308326
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  11308397 agggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagttaatg 11308326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 2119431 - 2119501
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||||||| || || | |||||||||| | |||||||||||||||||||||||||||||||    
T  2119431 gggaaatgttaaccggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatg 2119501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 13159896 - 13159966
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||||| || |||   || ||||||| ||||||||||||||||||||||||||||||    
T  13159896 agggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaat 13159966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatata 245  Q
    ||||||||||||||||||| |||||  || ||||||||| |||||||||||||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata 2362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 23925280 - 23925350
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| ||| ||||||||  ||||||||||  ||| |||||||||||||||||||| ||||||    
T  23925280 gggaaatgctaactggtacccccggggaactggttaagaatataaaaaaggaaattatatagtaattaatg 23925350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 42964434 - 42964365
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||| |||| |||||  ||||| |||||||||||| ||||||||| |||||| ||||||||||||||    
T  42964434 ggaaatgttaactggtgcttccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatg 42964365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 43269923 - 43269855
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| |||||||||||  |||  |||||||||||| |||||||| |||||||| |||||||||||||    
T  43269923 gaaatgttaaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagttaatg 43269855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 2391634 - 2391677
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  2391634 cactggttaaggataagaaaaaggaaattatatagtagttaatg 2391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 2393395 - 2393438
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  2393395 cactggttaaggataagaaaaaggaaattatatagtagttaatg 2393438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 2505350 - 2505416
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    ||||||||||||||| ||| || || ||| ||||||| | ||||||||||||||||||||||||||||    
T  2505350 gggaaatgctaaccgctgctcctgg-acattggttaaagatatgaaaaaggaaattatatagtagtta 2505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 27994486 - 27994416
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||| |||||||||| |||||||||||| ||  ||||| |||||| ||||||| ||||||    
T  27994486 gggaaatgttaaccgatgcccccggggcactggttaaggatactaaaaaagaaattttatagtaattaatg 27994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 38852216 - 38852279
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagt 250  Q
    |||||||||||||||||  |||||||||| | ||||||| ||| ||||| ||||||||||||||||    
T  38852216 gggaaatgctaaccggt--ccccgggacattcgttaaggatataaaaaatgaaattatatagtagt 38852279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 22248913 - 22248953
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  22248913 cactagttaaggatatgaaaaaggaaattatatagtagtta 22248953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 50359368 - 50359302
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| ||||||||  || |||||||||||| || ||||||  ||||||||||||||||||||    
T  50359368 aaatgctaactggtgccccgtgg-cactggttaaggttaagaaaaaaaaaattatatagtagttaatg 50359302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 29241669 - 29241707
Alignment:
Q  217 gttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  29241669 gttaaggatatgaaaatggaaattatatagtagttaatg 29241707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 23516621 - 23516589
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||||||||| ||||||||||||    
T  23516621 tgctaaccggtgcccccggggcactggttaagg 23516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 29210404 - 29210483
Alignment:
Q  176 taaaagttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29210404 taaaaattagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 29210483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 42770177 - 42770106
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  42770177 agggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatg 42770106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 29657769 - 29657841
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  29657769 tagggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatg 29657841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 18043161 - 18043232
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18043161 agggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatg 18043232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 51065935 - 51065864
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  51065935 agggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatg 51065864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 17333467 - 17333398
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  17333467 gggaaatgctaaccggtgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 17333398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 38702117 - 38702049
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatg 38702049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 14350464 - 14350393
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||    
T  14350464 agggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatg 14350393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 24178649 - 24178579
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatg 24178579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 38162850 - 38162920
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatg 38162920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 12072245 - 12072178
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||    
T  12072245 aaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatg 12072178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 15227738 - 15227809
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| |||| ||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  15227738 agggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 15227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 51368972 - 51368901
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| || || ||  |||||||||||||||||||||||||||||||||||||||||||    
T  51368972 agggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagttaatg 51368901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 5694321 - 5694391
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| |||| ||||||||||||||||||||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatg 5694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 45431276 - 45431348
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| || | ||| |||||| |||||||||||||||||||||||||||||||    
T  45431276 ttagggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagttaatg 45431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 29683194 - 29683266
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtat-gaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||| | |||  |||||||||||||||||||||||||||    
T  29683194 agggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatg 29683266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 9266915 - 9266844
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||| ||||| | |||||||||||| |||||||||||||||||||||||| ||||||    
T  9266915 agggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatg 9266844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 19032004 - 19031933
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaa 253  Q
    |||||||||||||||||||||| || ||| || | ||||||| |||||||||||||||||||||||||||||    
T  19032004 ttagggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagttaa 19031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 30657607 - 30657678
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| |||||| |||| ||||||  ||||||||| |||||||||||||||||||||    
T  30657607 agggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagttaatg 30657678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 43286725 - 43286792
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43286725 aaatgctaaccgatgtccctgggacactggttaaggatatgaaaaaggaaattatataatagttaatg 43286792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 47009992 - 47010063
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| ||||||  ||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  47009992 agggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 47010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 3784899 - 3784829
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| || |||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||    
T  3784899 gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagttaatg 3784829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 30294567 - 30294497
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| ||||| ||||||  || ||||||||| |||||||||||||||||||||||||||||||    
T  30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagttaatg 30294497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 13961205 - 13961281
Alignment:
Q  178 aaagttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| ||| |||||  ||||||||||||||||||||    
T  13961205 aaagatagggaaatgctaaccggtgcccccggggcacgggttaaggatat-aaaaaaaaaattatatagtagttaatg 13961281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 19011180 - 19011112
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  19011180 ggaaatgctaaccggtgtcccgggg-cacgggttaaggatatgaaaaaggaaattatatagtagttaatg 19011112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 6770344 - 6770407
Alignment:
Q  192 gctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| ||||| ||||  |||||| |||||||||||||||||||||||||||||||    
T  6770344 gctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatatagtagttaatg 6770407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 3097659 - 3097729
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||  |||||||||||    |||||||||| |||||||||||||||||||||||||||||||    
T  3097659 gggaaatgctaattggtgcccccggagtcctggttaaggatatgaaaaaggaaattatatagtagttaatg 3097729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 28726093 - 28726032
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||||    
T  28726093 agggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatat 28726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 14881149 - 14881086
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtt 251  Q
    ||||| |||| |||||||||| || ||||||||||| ||||||||||||||||||||| |||||    
T  14881149 aaatgttaactggtgcccccgtgatactggttaaggatatgaaaaaggaaattatataatagtt 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 35985807 - 35985737
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||||||| ||  ||||| |||||| ||| |||||||||||||||||||||||||||    
T  35985807 agggaaatgttaaccggtgcccc-ggatcactgtttaaggatataaaaaaggaaattatatagtagttaatg 35985737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 38335170 - 38335239
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| |   |||||||||||||| | |||||||||||||||||||||||| ||||||    
T  38335170 gggaaatgctaaccggtgtctt-gggacactggttaaagatatgaaaaaggaaattatatagtaattaatg 38335239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 48071475 - 48071552
Alignment:
Q  177 aaaagttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| |||||||||||||||||| ||| || |||  ||||||||||| |||| |||||||||||||||| |||||||||    
T  48071475 aaaaattagggaaatgctaaccgatgctccggggt-actggttaaggatatgtaaaaggaaattatataatagttaatg 48071552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 23473648 - 23473580
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||| | |||||| ||| || ||||||||| |||||||||||| ||||||||| ||||||||    
T  23473648 gaaatgctaactgatgcccctggggcattggttaaggatatgaaaaaggagattatatagcagttaatg 23473580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 36446508 - 36446441
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| |||| |||||||||| | |||||||||||  ||| |||||||||||||||||||||||||||    
T  36446508 gaaatgttaactggtgcccccgaggcactggttaagaatat-aaaaaggaaattatatagtagttaatg 36446441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 38595939 - 38595879
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||||||||||||||| |||||||||||| | || |||| |||||||||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatat 38595879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 48383294 - 48383238
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatat 244  Q
    |||||||||||||||| |||||| |||||||||||| | |||||||| |||||||||    
T  48383294 aaatgctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatat 48383238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 28481844 - 28481907
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagta 248  Q
    |||||||||||||||||||| |  || | |||||||||| ||||||||||||||||||| ||||    
T  28481844 gggaaatgctaaccggtgcctcttgggccctggttaaggatatgaaaaaggaaattatacagta 28481907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 47532856 - 47532786
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| | ||||   |||| |||||| |||||||||| ||||||||||||||||||||    
T  47532856 agggaaatgctaaccggtgtctccggagtactg-ttaaggatatgaaaaagaaaattatatagtagttaatg 47532786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 52749601 - 52749672
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| |  || |||| || ||||||| | ||||||||||||||||||||| |||||||||    
T  52749601 agggaaatgctaaccgatatccgcggggcattggttaaagatatgaaaaaggaaattatataatagttaatg 52749672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 41730304 - 41730370
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagt 250  Q
    ||||||||  ||||||||||||| ||| ||| |||||||  ||||||||| ||||||||||||||||    
T  41730304 agggaaatcttaaccggtgccccaggggcacgggttaagaatatgaaaaaagaaattatatagtagt 41730370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 10976087 - 10976018
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||| | | | | |||| ||||||| |||||||||||| ||||||||||||||||||    
T  10976087 ggaaatgctagccggtgtctctgaggcacttgttaaggatatgaaaaaggagattatatagtagttaatg 10976018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 15282672 - 15282631
Alignment:
Q  213 actggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  15282672 actggttaaggatatgaaaaagaaaattatatagtagttaat 15282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 52702332 - 52702272
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||| |||||| |||||||||||| | || |||| |||||||||||    
T  52702332 gggaaatgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatat 52702272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 39912466 - 39912395
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||| || | |||| ||||| |||||| ||| |||| |||||||||||| |||||||||    
T  39912466 agggaaatgttaaccggcgcactcggggcactgattaaggatataaaaagggaaattatatactagttaatg 39912395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 19940725 - 19940684
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||    
T  19940725 ttaggaaaatgttaaccggtgcccccggggcactggttaagg 19940684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 39497340 - 39497377
Alignment:
Q  218 ttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  39497340 ttaaggatatgaaaaagaaaattatatagtagttaatg 39497377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 3838945 - 3838893
Alignment:
Q  203 cccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| |||||||||||||  ||  ||||||||||||||||| |||||||||    
T  3838945 cccccgcgacactggttaagcatactaaaaaggaaattatataatagttaatg 3838893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 8473070 - 8473030
Alignment:
Q  215 tggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||| ||||||||||||||||| |||||||||    
T  8473070 tggttaaggatataaaaaaggaaattatataatagttaatg 8473030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 12377219 - 12377251
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||| ||||||||||||||||||    
T  12377219 tgctaaccggtgcctccgggacactggttaagg 12377251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 26228194 - 26228263
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| ||||||||||||  ||||||   ||||||||||||  || ||||| |||||||||||||||||||||    
T  26228194 agggtaatgctaaccgg--cccccgaagcactggttaaggagataaaaaatgaaattatatagtagttaatg 26228263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 30675758 - 30675688
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 30675688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 20831737 - 20831669
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatg 20831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 168465 - 168536
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  168465 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 21595848 - 21595916
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  21595848 ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatataggagttaatg 21595916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 11112638 - 11112709
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11112638 agggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatg 11112709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 13643015 - 13643082
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  13643015 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatg 13643082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 13743440 - 13743507
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  13743440 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatg 13743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 27988686 - 27988615
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  27988686 agggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatg 27988615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 28045988 - 28045917
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  28045988 agggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatg 28045917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 33357316 - 33357245
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  33357316 agggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 33357245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2805446 - 2805376
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatg 2805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 12652630 - 12652700
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 12652700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 34228682 - 34228752
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 34228752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 37373206 - 37373275
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  37373206 gggaaatgctaaccggtgcccccgg-acactggttaaggatatgaaaaaggaaattatataatagttaatg 37373275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 16888728 - 16888660
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  16888728 ggaaatgctaaccggtgcccccggg-cacaggttaaggatatgaaaaaggaaattatatagtagttaatg 16888660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12203853 - 12203924
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||    
T  12203853 tagggaaatgctaaccggtgcccccgggt-accggttaagggtatgaaaaaagaaattatatagtagttaatg 12203924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 12448281 - 12448352
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||    
T  12448281 tagggaaatgctaaccggtgcccccgggt-accggttaagggtatgaaaaaagaaattatatagtagttaatg 12448352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 4537931 - 4537860
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  4537931 agggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatg 4537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 16394247 - 16394177
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||| |||||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatg 16394177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 43119214 - 43119287
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| |||| ||||| |||| | |||||||||| ||||||||||||||||||||    
T  43119214 ttagggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatg 43119287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 9063238 - 9063168
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||| ||| | | |||||||||||| |||||||||||||||||||||||||||||||    
T  9063238 agggaaatgctaaccggtgtcccggag-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 9063168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 4648194 - 4648263
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  4648194 agggaaatgctaaccggtgtcccgggg-cactgattaaggatatgaaaaaggaaattatatagtagttaat 4648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 29444323 - 29444258
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaa 253  Q
    ||||| |||||||||| |||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  29444323 aaatgttaaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaa 29444258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 36730442 - 36730514
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| ||||||||| |||||||| || ||||| ||||||| |||||||||||||||||||||||||||||||    
T  36730442 ttaggggaatgctaactggtgccccagg-acactagttaaggatatgaaaaaggaaattatatagtagttaatg 36730514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 42035154 - 42035097
Alignment:
Q  198 cggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatg 42035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 9278211 - 9278282
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||| | |||||||| ||||| | ||||||||||||||||||||| |||||||||    
T  9278211 agggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagttaatg 9278282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 16785086 - 16785156
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||| |||||||||||| ||||||||    
T  16785086 agggaaatgctaaccggtgctccaggg-cactggttaaggatatgaaaaaagaaattatatagcagttaatg 16785156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 3930421 - 3930349
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| ||||||||||||| |||| |||||   ||||||| |||||||||||||||||||||||    
T  3930421 ttagggaaatgctaatcggtgcccccggg-cactagttaataatatgaaagaggaaattatatagtagttaatg 3930349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 10618021 - 10618088
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||| |  || ||| |||||||| |||||||||| ||||||||||||||||||||    
T  10618021 aaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagttaatg 10618088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 9537982 - 9537940
Alignment:
Q  213 actggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  9537982 actggttaaggatatgaaaaaggaaattatatagtagttaatg 9537940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 32113908 - 32113978
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| ||||||||||||| | ||||   | ||||||||| |||||||||||||||||||||||||||||||    
T  32113908 gggagatgctaaccggtgtctccggagtattggttaaggatatgaaaaaggaaattatatagtagttaatg 32113978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 39751658 - 39751605
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaa 238  Q
    |||||||||||||||||||||||||| |||||||||||| ||  ||||||||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaa 39751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 9254068 - 9254017
Alignment:
Q  204 ccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||| |||||||||||| ||||||||| |||||| ||||||||||||||    
T  9254068 ccccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatg 9254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 36923849 - 36923782
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    ||||||| ||||||| |||| ||| | ||||| |||||| ||||||||||||||||||||| ||||||    
T  36923849 gggaaatactaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 16890634 - 16890596
Alignment:
Q  217 gttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  16890634 gttaaggatatgaaaaaggaaattatatagtagttaatg 16890596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 29235235 - 29235305
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||  |||||  || || |||||| ||| ||||| |||||||||||||||||||||    
T  29235235 gggaaatgctaaccggtgttcccggagcattgattaaggatataaaaaaagaaattatatagtagttaatg 29235305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 40831280 - 40831347
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||| ||||||    | |||||||||| | |||||||||| ||||||||||||||||||||    
T  40831280 agggaaatgctaaccagtgccc----ggcactggttaaagatatgaaaaagaaaattatatagtagttaatg 40831347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 7304702 - 7304634
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||| ||| | ||||||   ||||| |||||||||| ||||||||||||||||||||    
T  7304702 agggaaatgttaaccggtgtccctgagacact---taaggatatgaaaaagaaaattatatagtagttaatg 7304634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 29566700 - 29566760
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||||||||||||||| ||| |||||||| | || |||| |||||||||||    
T  29566700 gggaaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatat 29566760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 6254286 - 6254325
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  6254286 agggaaatgttaaccggtgcccccgggaaactggttaagg 6254325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 17467606 - 17467673
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| ||||||  ||||| ||||| | ||||||||||||||||||  |||| ||||||    
T  17467606 aaatgctaaccggtacccccgaaacactagttaatgatatgaaaaaggaaattatgcagtaattaatg 17467673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 28626799 - 28626838
Alignment:
Q  216 ggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  28626799 ggttaaggatgtgaaaaaggaaattatatagtagttaatg 28626838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 23722248 - 23722286
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  23722248 gggaaatgttaaccggtgcccccggggcactggttaagg 23722286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 2490376 - 2490315
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatata 245  Q
    ||||||||||||||||||||| ||||| ||| |||||||| ||  ||||||| || ||||||    
T  2490376 agggaaatgctaaccggtgcctccggggcacaggttaaggataataaaaagggaaatatata 2490315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 26491614 - 26491573
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    ||||||||||| |||||||||||||| ||||||| |||||||    
T  26491614 ttagggaaatgttaaccggtgcccccaggacactagttaagg 26491573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 7261954 - 7261990
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  7261954 gaaatgttaaccggtgcctccgggacactggttaagg 7261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 9254101 - 9254069
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggtt 219  Q
    |||||||||||||||||||||||| ||||||||    
T  9254101 gaaatgctaaccggtgcccccggggcactggtt 9254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 34333283 - 34333354
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  34333283 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatg 34333354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 24438477 - 24438547
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatg 24438547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 5239283 - 5239355
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  5239283 tagggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatg 5239355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 12218623 - 12218552
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||    
T  12218623 agggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatg 12218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 29993674 - 29993603
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  29993674 agggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatg 29993603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 28587911 - 28587979
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  28587911 ggaaatgctaaccggtgcccccgg-acactggttaaggatatgaaaaaggaaattatatagtagtcaatg 28587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 18485960 - 18486031
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||| ||||||    
T  18485960 agggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatg 18486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 24798589 - 24798519
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||    
T  24798589 agggaaatgctaaccggtgcccccggg-cacttgttgaggatatgaaaaaggaaattatatagtagttaatg 24798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 4628565 - 4628635
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||| |||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  4628565 agggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagttaat 4628635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 34606261 - 34606331
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatg 34606331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 43594222 - 43594152
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||| |||||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggatataaaaaaggaaattatataatagttaatg 43594152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 27456301 - 27456229
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||    
T  27456301 ttagggaaatgctaactggtgcccccggg-cactggttaaggatatggaaaaagaaattatatagtagttaatg 27456229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 28262029 - 28262098
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 252  Q
    |||| ||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  28262029 taggaaaatgctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta 28262098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 34546501 - 34546430
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||||||||||||||    
T  34546501 agggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagttaatg 34546430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 8754771 - 8754701
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||||  ||  |||||||||||| ||||||||| |||||||||||||||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagttaatg 8754701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 5729345 - 5729416
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| |||||||||  |||||  |||||||||||| ||||||||||||||||||||| |||||||||    
T  5729345 agggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagttaatg 5729416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 11686507 - 11686440
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||  |||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  11686507 aaatgctaactggtgcttccgggatactggttaaggatataaaaaaggaaattatatagtagttaatg 11686440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 1736980 - 1737050
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||  | ||| |||||||||||| ||||||||| ||||||||||| |||||||||    
T  1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagttaatg 1737050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 30810675 - 30810725
Alignment:
Q  205 cccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  30810675 cccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 30810725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 47656981 - 47657050
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||  | ||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagtaattaatg 47657050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 47839481 - 47839561
Alignment:
Q  173 atttaaaagttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||| ||| ||||||||||||||||||||| ||| |||  ||||||||||| ||||||||||||| ||||||| ||||||||    
T  47839481 attttaaaattagggaaatgctaaccggtgtcccggggt-actggttaaggatatgaaaaaggaatttatataatagttaat 47839561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 37631730 - 37631658
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| ||||||||||  ||||| ||| |||||||| ||| ||||||||||||||||| || ||||||    
T  37631730 tagggaaatgttaaccggtgcttccggggcacgggttaaggatataaaaaaggaaattatataataattaatg 37631658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 13065061 - 13064993
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||| |   ||||||||| ||||||||||||||||||||| || ||||||    
T  13065061 gggaaatgctaaccggtgcccacggtat--tggttaaggatatgaaaaaggaaattatataatatttaatg 13064993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 22973600 - 22973667
Alignment:
Q  187 gaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||  ||||| ||||| |||||||||| | ||| ||||| ||||||||||||||||||||    
T  22973600 gaaatgctaactagtgcctccggggcactggttaatgatataaaaaaagaaattatatagtagttaat 22973667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 47118150 - 47118095
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaatt 240  Q
    ||||||||||||| |||||| ||||| |||||||||| | ||||||||||||||||    
T  47118150 gggaaatgctaactggtgcctccggggcactggttaaagatatgaaaaaggaaatt 47118095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 18470126 - 18470056
Alignment:
Q  185 gggaaatgctaaccggtgccccc-gggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||  ||  |||||||||||||||||| |||||||    
T  18470126 gggaaatgctaaccggtgcccccgggggcaccggttaagcatactaaaaaggaaattatatagcagttaat 18470056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 6097335 - 6097396
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||||| |||||||||| |||||||||||| | || |||| |||||||||||    
T  6097335 agggaaatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatat 6097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 20402388 - 20402449
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||||||||||||||||| |||||||||| ||||||||| | || |||| |||||||||||    
T  20402388 agggaaatgctaaccggtgtccccgggacattggttaaggataataaaaagggaaattatat 20402449  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 45045799 - 45045840
Alignment:
Q  214 ctggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  45045799 ctggttaagggtatgaaaaatgaaattatatagtaattaatg 45045840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 47083076 - 47083125
Alignment:
Q  206 ccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| |||| |||||||| ||||||||| |||||||||||||||||||||    
T  47083076 ccggaacaccggttaaggatatgaaaaaagaaattatatagtagttaatg 47083125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 4100679 - 4100640
Alignment:
Q  216 ggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  4100679 ggttaaggatatgaaaaaggaaattatatagtaattaatg 4100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 7689387 - 7689316
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| ||||||||| | | ||||||||| |||||| ||| |||||||||||| || |||| ||||||    
T  7689387 agggaaatgttaaccggtgtctctgggacactgattaaggatataaaaaaggaaattttacagtaattaatg 7689316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 18117147 - 18117213
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||| ||| || |||||| | ||||||  ||||||| |||||||||||||||||||||||    
T  18117147 aaatgctaaccgatgctcc-gggacatttgttaagtatatgaaagaggaaattatatagtagttaatg 18117213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 30924180 - 30924117
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    ||||| ||||||||||||||||||||||| ||| |||||||| | || |||| |||||||||||    
T  30924180 ttaggaaaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatat 30924117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 30703689 - 30703727
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  30703689 gggaaatgttaaccggtgcccccggggcactggttaagg 30703727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 42044448 - 42044410
Alignment:
Q  216 ggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  42044448 ggttaaaggtatgaaaaaagaaattatatagtagttaat 42044410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 32805537 - 32805598
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatat 244  Q
    |||||||||||||||||||  |||||| |||||||||||| | || |||| |||||||||||    
T  32805537 agggaaatgctaaccggtgttcccggggcactggttaaggataataaaaagggaaattatat 32805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 4087649 - 4087693
Alignment:
Q  211 acactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||  ||  |||||||||||||||||||||||||||    
T  4087649 acactggttaagcatactaaaaaggaaattatatagtagttaatg 4087693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 23357895 - 23357823
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||||| || | ||   ||| ||||||| |||||||||| ||||| ||||||||||||||    
T  23357895 tagggaaatgttaaccggttcctctggagtactcgttaaggatatgaaaaagaaaattgtatagtagttaatg 23357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 23363354 - 23363283
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||| ||||| ||||||||| ||| | | |||| ||||||| || ||||||||||||| ||||||||||||||    
T  23363354 taggaaaatgttaaccggtgtcccggag-cactcgttaaggataagaaaaaggaaattgtatagtagttaatg 23363283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 31320414 - 31320382
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||||||||| ||||||||||||    
T  31320414 tgctaaccggtgcccccggggcactggttaagg 31320382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 35791684 - 35791652
Alignment:
Q  191 tgctaaccggtgcccccgggacactggttaagg 223  Q
    |||||||||||||||||||| ||||||||||||    
T  35791684 tgctaaccggtgcccccggggcactggttaagg 35791652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 68477 - 68406
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  68477 agggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 68406  T

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Target: scaffold0264 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 22960 - 23030
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||    
T  22960 agggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaat 23030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 6295 - 6226
Alignment:
Q  186 ggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatg 6226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 116207 - 116274
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||    
T  116207 aaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatg 116274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 11157 - 11086
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11157 ttagggaaatgctaactggtgcccc--ggacactggttaaggatatgaaaaaggaaattatatattagttaatg 11086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 50548 - 50618
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||| ||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatg 50618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 53507 - 53462
Alignment:
Q  210 gacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  53507 gacactggttaaggatataaaaaaggaaattatatagtagttaatg 53462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 14896 - 14966
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||||||||||| ||||||| |||||||||| | ||| ||||| |||||||||||||||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatg 14966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 675 - 747
Alignment:
Q  182 ttagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    ||||||||||||||| |||||||||| |  ||| |||||| | ||||||||||||||||||||||||||||||    
T  675 ttagggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaat 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 8066 - 8013
Alignment:
Q  201 tgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  8066 tgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 8013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 7305 - 7358
Alignment:
Q  201 tgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  7305 tgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagttaatg 7358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 147092 - 147022
Alignment:
Q  184 agggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||||||||||||||||||| || |||   || ||||||| ||||||||||||||||||||||||||||||    
T  147092 agggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaat 147022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 291 - 362
Alignment:
Q  183 tagggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||| |||||||||||||| ||| |||||||||||  |||||||||| |||||||||| |||||||||    
T  291 tagggaaatcctaaccggtgccccaggg-cactggttaagcatatgaaaaagaaaattatataatagttaatg 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 95767 - 95699
Alignment:
Q  188 aaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatga 256  Q
    ||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||||| || |||||||    
T  95767 aaatgctaaccggtgcccccgaggtactggttaagaatatgaaaaaggaaattatataataattaatga 95699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 825 - 895
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||| |||||||  ||||  |||| ||||||| |||||||||| ||||||||||||||||||||    
T  825 gggaaatgctagccggtgcttccggagcactagttaaggatatgaaaaagaaaattatatagtagttaatg 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 25719 - 25788
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatg 255  Q
    ||||||||||||| |||||| | |||| || |||||||| ||||||||||| |||||||||||| ||||||    
T  25719 gggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaagg-aattatatagtaattaatg 25788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 69253 - 69295
Alignment:
Q  212 cactggttaagggtatgaaaaaggaaattatatagtagttaat 254  Q
    |||| ||||||| |||||||||| |||||||||||||||||||    
T  69253 cactcgttaaggatatgaaaaagtaaattatatagtagttaat 69295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 233864 - 233920
Alignment:
Q  185 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaatta 241  Q
    ||||||||| || ||||| | |||||||| ||||||| | |||||||||||||||||    
T  233864 gggaaatgcgaatcggtgtctccgggacattggttaaagatatgaaaaaggaaatta 233920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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