View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7872_low_12 (Length: 250)

Name: NF7872_low_12
Description: NF7872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7872_low_12
NF7872_low_12
[»] chr3 (50 HSPs)
chr3 (1-250)||(20725164-20725422)
chr3 (2-246)||(19249246-19249493)
chr3 (1-249)||(52920483-52920734)
chr3 (1-249)||(29951269-29951520)
chr3 (1-249)||(30000423-30000674)
chr3 (1-246)||(6090809-6091058)
chr3 (1-249)||(14392836-14393086)
chr3 (1-249)||(13948413-13948665)
chr3 (1-143)||(26417619-26417761)
chr3 (1-205)||(12388733-12388954)
chr3 (2-205)||(49642637-49642843)
chr3 (139-246)||(16199645-16199752)
chr3 (1-249)||(15903276-15903528)
chr3 (1-247)||(20646231-20646482)
chr3 (3-124)||(12968385-12968506)
chr3 (2-249)||(31303464-31303718)
chr3 (149-249)||(41495202-41495303)
chr3 (1-157)||(16032602-16032757)
chr3 (1-103)||(41495076-41495179)
chr3 (160-249)||(12962931-12963021)
chr3 (148-249)||(22803931-22804032)
chr3 (2-157)||(17238847-17239003)
chr3 (84-245)||(25398108-25398271)
chr3 (1-143)||(12726169-12726312)
chr3 (1-106)||(28582183-28582289)
chr3 (1-100)||(46349826-46349926)
chr3 (1-105)||(47207783-47207889)
chr3 (1-106)||(2561265-2561371)
chr3 (1-106)||(14969404-14969510)
chr3 (1-103)||(23538146-23538248)
chr3 (160-249)||(37467541-37467631)
chr3 (2-105)||(47405398-47405502)
chr3 (3-105)||(40799953-40800056)
chr3 (2-164)||(49553407-49553570)
chr3 (1-106)||(37467410-37467516)
chr3 (1-106)||(38177619-38177725)
chr3 (1-66)||(13780601-13780666)
chr3 (1-66)||(19888962-19889027)
chr3 (206-250)||(26417520-26417564)
chr3 (154-205)||(13824265-13824316)
chr3 (1-246)||(18121454-18121704)
chr3 (1-102)||(11223640-11223742)
chr3 (1-106)||(18142728-18142834)
chr3 (1-63)||(53056747-53056809)
chr3 (161-249)||(2561414-2561503)
chr3 (2-106)||(13824147-13824252)
chr3 (160-205)||(49666291-49666336)
chr3 (166-249)||(11223792-11223876)
chr3 (161-205)||(30054117-30054161)
chr3 (161-205)||(46796268-46796312)
[»] chr2 (47 HSPs)
chr2 (1-250)||(22272205-22272454)
chr2 (3-171)||(41121577-41121745)
chr2 (2-250)||(44881240-44881473)
chr2 (1-249)||(22454767-22455018)
chr2 (3-171)||(23595427-23595595)
chr2 (1-249)||(30667061-30667313)
chr2 (1-245)||(23235079-23235327)
chr2 (1-249)||(24850442-24850694)
chr2 (1-131)||(18430838-18430968)
chr2 (1-143)||(18702810-18702952)
chr2 (1-205)||(10009572-10009778)
chr2 (1-171)||(19540488-19540659)
chr2 (1-205)||(22187923-22188130)
chr2 (39-208)||(22260516-22260686)
chr2 (1-234)||(21537040-21537276)
chr2 (3-171)||(23184170-23184333)
chr2 (1-145)||(26618983-26619129)
chr2 (2-189)||(25037096-25037286)
chr2 (2-189)||(25041203-25041393)
chr2 (1-157)||(25829206-25829363)
chr2 (1-247)||(9015149-9015398)
chr2 (1-249)||(39037433-39037670)
chr2 (133-249)||(40782676-40782794)
chr2 (1-205)||(20568571-20568778)
chr2 (1-143)||(18376791-18376934)
chr2 (3-114)||(25189472-25189583)
chr2 (1-157)||(24377173-24377332)
chr2 (148-233)||(28140427-28140514)
chr2 (1-107)||(20151956-20152063)
chr2 (2-105)||(6574045-6574150)
chr2 (7-179)||(7609039-7609213)
chr2 (1-131)||(19115155-19115285)
chr2 (1-205)||(22317665-22317874)
chr2 (2-110)||(30621289-30621398)
chr2 (2-110)||(30623910-30624019)
chr2 (6-204)||(38781476-38781675)
chr2 (1-106)||(13963900-13964006)
chr2 (212-250)||(19115411-19115449)
chr2 (2-66)||(40782550-40782614)
chr2 (161-249)||(6573914-6574003)
chr2 (217-250)||(18703064-18703097)
chr2 (160-205)||(22785487-22785532)
chr2 (161-249)||(24576284-24576373)
chr2 (160-205)||(33074459-33074504)
chr2 (181-245)||(19540654-19540718)
chr2 (161-205)||(28550765-28550809)
chr2 (161-205)||(40332297-40332341)
[»] chr4 (46 HSPs)
chr4 (7-250)||(6641762-6642005)
chr4 (1-205)||(40846171-40846378)
chr4 (1-249)||(45833466-45833719)
chr4 (1-129)||(11915772-11915900)
chr4 (1-131)||(41114679-41114809)
chr4 (3-249)||(16632514-16632762)
chr4 (1-249)||(14604695-14604946)
chr4 (1-187)||(37435387-37435574)
chr4 (1-249)||(12601173-12601424)
chr4 (1-249)||(15139299-15139551)
chr4 (2-157)||(56034647-56034803)
chr4 (46-145)||(17787948-17788047)
chr4 (1-199)||(12811016-12811217)
chr4 (61-215)||(22089721-22089876)
chr4 (1-105)||(22675454-22675559)
chr4 (1-106)||(14833468-14833574)
chr4 (1-105)||(13576048-13576153)
chr4 (6-106)||(413079-413180)
chr4 (1-157)||(55380362-55380519)
chr4 (1-143)||(14904252-14904395)
chr4 (1-131)||(17540467-17540595)
chr4 (211-250)||(17540704-17540743)
chr4 (1-143)||(19884774-19884916)
chr4 (199-250)||(41114540-41114591)
chr4 (1-106)||(3483793-3483899)
chr4 (1-106)||(29680477-29680583)
chr4 (194-250)||(11915989-11916045)
chr4 (215-250)||(17787824-17787859)
chr4 (1-143)||(19911776-19911919)
chr4 (175-249)||(29680346-29680421)
chr4 (1-106)||(19620994-19621100)
chr4 (161-249)||(19884922-19885012)
chr4 (161-249)||(16940196-16940285)
chr4 (6-106)||(19666449-19666550)
chr4 (161-205)||(3105285-3105329)
chr4 (161-205)||(6517704-6517748)
chr4 (161-205)||(17398532-17398576)
chr4 (166-245)||(56034798-56034878)
chr4 (1-64)||(11901259-11901322)
chr4 (1-106)||(9140984-9141090)
chr4 (1-106)||(37985545-37985651)
chr4 (6-106)||(17247321-17247421)
chr4 (161-205)||(10693070-10693114)
chr4 (161-205)||(10906836-10906880)
chr4 (161-205)||(14571243-14571287)
chr4 (161-205)||(22191057-22191101)
[»] chr6 (35 HSPs)
chr6 (1-216)||(19470748-19470963)
chr6 (1-250)||(10640255-10640489)
chr6 (1-205)||(26943654-26943847)
chr6 (1-249)||(24116906-24117158)
chr6 (6-249)||(13435615-13435862)
chr6 (1-249)||(23284642-23284893)
chr6 (2-205)||(25597558-25597764)
chr6 (1-245)||(15531446-15531695)
chr6 (1-248)||(21625179-21625427)
chr6 (1-249)||(9717921-9718173)
chr6 (1-205)||(13602250-13602457)
chr6 (1-125)||(15987311-15987437)
chr6 (181-250)||(3680738-3680807)
chr6 (2-106)||(32544344-32544449)
chr6 (2-171)||(19624058-19624228)
chr6 (2-104)||(20730671-20730774)
chr6 (1-106)||(15302278-15302384)
chr6 (2-106)||(26972193-26972298)
chr6 (161-249)||(20112533-20112621)
chr6 (168-249)||(34451503-34451586)
chr6 (175-249)||(19624217-19624292)
chr6 (161-247)||(33351766-33351853)
chr6 (1-157)||(12715333-12715491)
chr6 (1-106)||(14100405-14100511)
chr6 (161-238)||(16264996-16265074)
chr6 (1-59)||(18435634-18435692)
chr6 (161-249)||(21235338-21235427)
chr6 (1-104)||(18378392-18378496)
chr6 (1-75)||(17927866-17927941)
chr6 (166-216)||(19086379-19086430)
chr6 (1-63)||(20487927-20487989)
chr6 (2-106)||(19688845-19688950)
chr6 (161-249)||(20730539-20730628)
chr6 (211-239)||(12348397-12348425)
chr6 (161-205)||(12423446-12423490)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-250)||(43685-43952)
[»] chr7 (60 HSPs)
chr7 (1-250)||(13880663-13880917)
chr7 (1-205)||(16316436-16316641)
chr7 (2-143)||(39284506-39284647)
chr7 (6-131)||(13893952-13894077)
chr7 (1-131)||(19236997-19237127)
chr7 (72-247)||(9098079-9098271)
chr7 (1-246)||(10883008-10883257)
chr7 (1-249)||(11319479-11319731)
chr7 (1-205)||(15467990-15468197)
chr7 (2-249)||(12366582-12366831)
chr7 (2-205)||(28409114-28409319)
chr7 (6-205)||(22577900-22578100)
chr7 (1-187)||(21283270-21283457)
chr7 (39-249)||(13692454-13692667)
chr7 (1-249)||(11792981-11793233)
chr7 (1-249)||(13880178-13880430)
chr7 (137-249)||(19236845-19236957)
chr7 (1-205)||(21695475-21695668)
chr7 (1-249)||(44467138-44467376)
chr7 (87-249)||(13260456-13260620)
chr7 (5-157)||(24788219-24788372)
chr7 (161-249)||(30026128-30026217)
chr7 (1-106)||(13730653-13730759)
chr7 (1-171)||(29935272-29935442)
chr7 (1-105)||(9709781-9709886)
chr7 (1-157)||(13648803-13648960)
chr7 (148-246)||(14193298-14193398)
chr7 (1-105)||(15088594-15088699)
chr7 (2-106)||(28622334-28622439)
chr7 (161-249)||(2500261-2500351)
chr7 (1-106)||(13302884-13302990)
chr7 (1-111)||(13018478-13018589)
chr7 (1-106)||(2500112-2500218)
chr7 (1-106)||(9069636-9069742)
chr7 (176-249)||(13137756-13137830)
chr7 (147-249)||(5000687-5000790)
chr7 (1-143)||(23279900-23280042)
chr7 (166-249)||(2913453-2913538)
chr7 (2-48)||(9098283-9098329)
chr7 (1-106)||(30944301-30944407)
chr7 (1-66)||(21692361-21692426)
chr7 (1-105)||(33691691-33691796)
chr7 (3-143)||(41842215-41842355)
chr7 (166-249)||(14426756-14426840)
chr7 (161-205)||(15088743-15088787)
chr7 (166-249)||(16542869-16542952)
chr7 (166-249)||(16622710-16622793)
chr7 (161-247)||(21381287-21381374)
chr7 (1-106)||(2913586-2913692)
chr7 (175-249)||(4494725-4494799)
chr7 (148-246)||(13031921-13032019)
chr7 (1-106)||(13137873-13137979)
chr7 (133-171)||(13893895-13893933)
chr7 (1-63)||(14426621-14426683)
chr7 (1-106)||(30945334-30945440)
chr7 (160-205)||(4821708-4821753)
chr7 (160-205)||(12174218-12174263)
chr7 (148-205)||(13303062-13303119)
chr7 (161-249)||(30945221-30945310)
chr7 (1-57)||(14193188-14193244)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-226)||(35992-36217)
scaffold0056 (148-205)||(25501-25559)
scaffold0056 (161-205)||(34655-34699)
[»] chr8 (45 HSPs)
chr8 (6-249)||(19707581-19707824)
chr8 (13-249)||(20382225-20382463)
chr8 (1-246)||(33082927-33083175)
chr8 (1-246)||(16681136-16681384)
chr8 (1-249)||(19156266-19156504)
chr8 (1-246)||(19943306-19943555)
chr8 (1-114)||(43644966-43645079)
chr8 (1-246)||(39693605-39693854)
chr8 (1-249)||(17914529-17914781)
chr8 (1-249)||(17267544-17267793)
chr8 (3-250)||(19956180-19956420)
chr8 (2-204)||(23263488-23263692)
chr8 (1-249)||(24646408-24646659)
chr8 (1-179)||(17701815-17701996)
chr8 (1-245)||(18730810-18731072)
chr8 (1-131)||(22461589-22461719)
chr8 (1-249)||(20255397-20255646)
chr8 (1-130)||(18722597-18722727)
chr8 (1-170)||(18121018-18121190)
chr8 (1-130)||(18685348-18685478)
chr8 (1-196)||(16189054-16189250)
chr8 (1-179)||(16207376-16207557)
chr8 (1-171)||(18321067-18321240)
chr8 (1-105)||(23185202-23185307)
chr8 (1-249)||(29693385-29693639)
chr8 (1-105)||(30421404-30421509)
chr8 (1-246)||(17525562-17525810)
chr8 (39-205)||(22745595-22745764)
chr8 (160-249)||(18680031-18680120)
chr8 (1-106)||(21932953-21933059)
chr8 (1-157)||(18719071-18719228)
chr8 (161-249)||(602564-602652)
chr8 (201-249)||(17702000-17702048)
chr8 (133-245)||(18722465-18722577)
chr8 (1-106)||(12757738-12757844)
chr8 (166-205)||(6407938-6407977)
chr8 (175-249)||(17441652-17441727)
chr8 (166-245)||(18685245-18685324)
chr8 (1-106)||(602695-602801)
chr8 (211-249)||(18772912-18772950)
chr8 (160-205)||(22674009-22674054)
chr8 (160-205)||(43640005-43640050)
chr8 (161-205)||(18151555-18151599)
chr8 (161-205)||(24551521-24551565)
chr8 (182-246)||(43645086-43645150)
[»] chr1 (39 HSPs)
chr1 (1-250)||(17024732-17024967)
chr1 (5-249)||(12613547-12613813)
chr1 (1-250)||(21191630-21191868)
chr1 (1-205)||(33256149-33256354)
chr1 (1-205)||(33276321-33276526)
chr1 (1-249)||(22599932-22600185)
chr1 (1-205)||(19717601-19717806)
chr1 (2-197)||(22153935-22154133)
chr1 (1-106)||(29215874-29215980)
chr1 (1-249)||(35401886-35402137)
chr1 (1-249)||(21028870-21029107)
chr1 (1-187)||(48704281-48704468)
chr1 (1-157)||(12284500-12284657)
chr1 (4-205)||(20954269-20954473)
chr1 (1-105)||(22427255-22427360)
chr1 (1-145)||(18896453-18896600)
chr1 (66-249)||(2268671-2268857)
chr1 (1-106)||(28492301-28492407)
chr1 (1-205)||(38282643-38282850)
chr1 (1-143)||(32785798-32785940)
chr1 (1-102)||(1577944-1578046)
chr1 (160-249)||(12284678-12284768)
chr1 (166-247)||(26701897-26701978)
chr1 (1-249)||(23036279-23036530)
chr1 (1-106)||(1900422-1900528)
chr1 (1-105)||(39200890-39200995)
chr1 (2-105)||(2267167-2267271)
chr1 (211-250)||(18896338-18896377)
chr1 (1-105)||(22464706-22464812)
chr1 (167-208)||(10251221-10251262)
chr1 (1-125)||(16235174-16235299)
chr1 (3-143)||(26701989-26702130)
chr1 (1-45)||(2834767-2834811)
chr1 (173-248)||(30893314-30893390)
chr1 (161-249)||(16235062-16235152)
chr1 (2-157)||(10757499-10757656)
chr1 (161-249)||(35040390-35040479)
chr1 (160-205)||(46089218-46089263)
chr1 (161-205)||(39200804-39200848)
[»] scaffold0081 (1 HSPs)
scaffold0081 (8-249)||(40722-40974)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-249)||(220316-220566)
scaffold0004 (133-250)||(244034-244151)
scaffold0004 (1-131)||(244188-244317)
scaffold0004 (1-205)||(377385-377592)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-250)||(6085-6320)
[»] chr5 (32 HSPs)
chr5 (1-249)||(642520-642770)
chr5 (1-249)||(21099517-21099767)
chr5 (1-246)||(23881141-23881388)
chr5 (1-249)||(17815042-17815293)
chr5 (1-131)||(25096756-25096886)
chr5 (1-131)||(25154726-25154856)
chr5 (1-158)||(21198910-21199066)
chr5 (1-179)||(7745577-7745756)
chr5 (85-249)||(9398571-9398723)
chr5 (2-245)||(19536117-19536363)
chr5 (2-143)||(41566354-41566496)
chr5 (5-157)||(6512337-6512490)
chr5 (1-157)||(21910630-21910787)
chr5 (1-157)||(23412880-23413037)
chr5 (2-105)||(33022739-33022843)
chr5 (137-205)||(25096665-25096733)
chr5 (137-205)||(25154635-25154703)
chr5 (183-249)||(6499480-6499546)
chr5 (1-157)||(89328-89485)
chr5 (116-190)||(12352689-12352765)
chr5 (1-171)||(21072131-21072303)
chr5 (1-106)||(20550968-20551075)
chr5 (173-249)||(89264-89341)
chr5 (1-66)||(31117951-31118016)
chr5 (161-205)||(10848985-10849029)
chr5 (160-247)||(29138222-29138310)
chr5 (160-199)||(23391492-23391531)
chr5 (161-249)||(26784577-26784667)
chr5 (1-63)||(11993962-11994024)
chr5 (166-247)||(28139813-28139895)
chr5 (148-205)||(20551102-20551159)
chr5 (166-249)||(5430110-5430194)
[»] scaffold0290 (1 HSPs)
scaffold0290 (3-249)||(18402-18652)
[»] scaffold0025 (2 HSPs)
scaffold0025 (60-186)||(74705-74831)
scaffold0025 (1-37)||(74659-74695)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-249)||(36557-36808)
scaffold0120 (1-249)||(42197-42448)
[»] scaffold0022 (3 HSPs)
scaffold0022 (7-205)||(159139-159354)
scaffold0022 (1-249)||(39503-39741)
scaffold0022 (1-249)||(137563-137801)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-171)||(9981-10151)
scaffold0047 (1-106)||(30302-30408)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-249)||(553-805)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-249)||(20752-21004)
[»] scaffold0861 (1 HSPs)
scaffold0861 (2-249)||(4728-4979)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-249)||(19256-19505)
[»] scaffold0040 (2 HSPs)
scaffold0040 (4-131)||(1424-1551)
scaffold0040 (201-250)||(1285-1334)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-249)||(212432-212683)
scaffold0005 (1-106)||(6125-6231)
scaffold0005 (161-205)||(246089-246133)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-249)||(9873-10123)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-142)||(10034-10176)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-143)||(5704-5846)
scaffold0273 (215-250)||(8119-8154)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-249)||(568-819)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-205)||(25801-26008)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-205)||(60094-60299)
scaffold0026 (120-216)||(115719-115816)
scaffold0026 (1-129)||(151775-151903)
scaffold0026 (133-205)||(151716-151788)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-249)||(5473-5723)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-157)||(10047-10204)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-187)||(14726-14913)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-157)||(1738-1895)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-249)||(27226-27462)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-106)||(22754-22860)
[»] scaffold0193 (1 HSPs)
scaffold0193 (148-249)||(16006-16109)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-143)||(9997-10141)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-157)||(15196-15352)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-249)||(12287-12540)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-249)||(32563-32802)
scaffold0084 (1-172)||(49410-49584)
scaffold0084 (1-37)||(342-378)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-187)||(1768-1955)
[»] scaffold0251 (1 HSPs)
scaffold0251 (6-106)||(7786-7887)
[»] scaffold0395 (1 HSPs)
scaffold0395 (148-246)||(13318-13416)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-106)||(19109-19215)
scaffold0217 (161-205)||(9784-9828)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-63)||(215468-215530)
[»] scaffold0485 (1 HSPs)
scaffold0485 (120-187)||(9252-9319)
[»] scaffold0247 (1 HSPs)
scaffold0247 (161-247)||(23362-23449)
[»] scaffold0243 (1 HSPs)
scaffold0243 (39-205)||(4819-4988)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-106)||(89982-90088)
scaffold0003 (161-249)||(89852-89941)
[»] scaffold0473 (1 HSPs)
scaffold0473 (161-247)||(2510-2598)
[»] scaffold1359 (2 HSPs)
scaffold1359 (166-249)||(469-553)
scaffold1359 (1-63)||(626-688)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-104)||(143166-143270)
[»] scaffold0020 (1 HSPs)
scaffold0020 (215-246)||(145160-145191)
[»] scaffold0016 (1 HSPs)
scaffold0016 (160-199)||(937-976)
[»] scaffold0066 (1 HSPs)
scaffold0066 (175-249)||(60666-60740)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-63)||(78337-78399)
[»] scaffold0011 (1 HSPs)
scaffold0011 (161-205)||(65271-65315)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 20725164 - 20725422
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20725164 gcatccaatgtcttcaaatccttttgaattagtcgttgcttcactcttctggtcttctgcaatgctagacgtgattagatcttttgaacagcctttgaag 20725263  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||    
T  20725264 ctttaattctctcagcttatgatgatcttcagcttctggtgatgtttcttttgatgaggtgcttatgatgaacttgcttctgatgacatcatcacttcaa 20725363  T
Q  201 gagcat---------ttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||         ||||||| ||||||||||||||||||||||||||||||||||||    
T  20725364 gagcatcagaagcacttgactttagaacctcttttcttcagatgcttcaagcttccttc 20725422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 19249493 - 19249246
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagc 101  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||| |||||||| ||| |||||||| ||||||||||    
T  19249493 catccaatgccttcaaatccttttgaattagctgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatcgtttgaacaacctttgaagc 19249394  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtga-----tgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    ||||| ||||||| ||| | |||||||||| || ||| |||     || ||||  ||||  | ||||| ||||| |  ||||| |||||||||| |||||    
T  19249393 tttaagtctctcatcttctaatgatcttcagctcctgatgaaaaactgcttctagtgat--gttgcttctgatg-aggtgcttctgatgacgtcatcact 19249297  T
Q  197 tcaagagcatttg-acttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19249296 tcaggagcatttgaacttcagaaccacttttcttcagatgcttcaagcttc 19249246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 52920483 - 52920734
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||| ||||  ||||||  ||| |||||||||||||||||| ||||||||| ||||| ||||| |||  |||| |||||||||||    
T  52920483 gcatcaaatgccttcaaatacttta-aattagttgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcagcctttgaa 52920581  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
     |||||| |||  || ||  |||||| ||||| ||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  52920582 actttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 52920681  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||| ||||||| | | ||| ||||||||||||||||||||||||    
T  52920682 caggagcacttttacttcaggagcacttctcttcagatgcttcaagcttcctt 52920734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 29951520 - 29951269
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| |||||||| ||| ||||| | ||||||| ||||| ||||| |||  ||||| | ||||||||    
T  29951520 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaa 29951421  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| ||||||  ||| |||||| ||||| ||||| ||||| ||   |||||||| |||||||| |||||||||||||| ||| |||||| ||||||    
T  29951420 gctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcactt 29951321  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |||||||||| | | || |||| ||||||||||||||||||||    
T  29951320 caggagcacttgacttcagtagcactattctacagatgcttcaagcttcctt 29951269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 30000674 - 30000423
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| |||||||| ||| ||||| | ||||||| ||||| ||||| |||  ||||| | ||||||||    
T  30000674 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaa 30000575  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| ||||||  ||| |||||| ||||| ||||| ||||| ||   |||||||| |||||||| |||||||||||||| ||| |||||| ||||||    
T  30000574 gctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcactt 30000475  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |||||||||| | | || |||| ||||||||||||||||||||    
T  30000474 caggagcacttgacttcagtagcactattctacagatgcttcaagcttcctt 30000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6090809 - 6091058
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||||||||||||||||  ||||||  ||| |||||||||||||||||| |||||||| |||||| ||||| |||  |||| || ||||||||    
T  6090809 gcattcaatgccttcaaatcctttcaaattagatgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcaacctttgaa 6090908  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    | ||||| |||  || ||  |||||| ||||| ||||||||||| |  | ||||||||||| ||||| |||||||||||||| |||||||||| | ||||    
T  6090909 gttttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcataactt 6091008  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    || ||||| ||| ||||||| | | ||| |||||||||||||||||||||    
T  6091009 catgagcactttaacttcaggagcacttctcttcagatgcttcaagcttc 6091058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 14393086 - 14392836
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| ||||  ||||||||||| ||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  14393086 gcatccaatgctttcaaatcctttcaaaatagtcgttgtttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 14392987  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
     |||||| |||   | ||  | |||| ||||| ||||| ||||| || ||| ||||||| |||||||||||| ||||||| |||||||||| ||||||||    
T  14392986 actttaagtcttgtatctcctaatgaacttcagcttctagtgatcttgcttttgatgagatgcttatgatgatcttgcttctgatgacgtcatcacttca 14392887  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||| ||||||| | | ||| ||||||||||||||||||||||||    
T  14392886 ggagcactttaacttcaggagcacttctcttcagatgcttcaagcttcctt 14392836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 13948413 - 13948665
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||||| ||||| ||||| |||  ||||||| |||||||     
T  13948413 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgac 13948512  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||| | ||||||||||| ||   ||||||||||| ||||| |||| ||||||||| |||||||||| ||||||    
T  13948513 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcactt 13948612  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||||  | | ||| ||||||||||||| ||||||||||    
T  13948613 catgagcattttgacttcaagagcacttctcttcagatgctttaagcttcctt 13948665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 26417761 - 26417619
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| || |||| ||| |||||||| | | ||||||||  ||||||||    
T  26417761 gcatccaatgccttcaaattcttttgaattagccgttgcttcattcttctagtcttctggaatgataggcgtgattaaaacatttgaacaaactttgaag 26417662  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||| |||||| ||||||| ||||||||||||||| ||| ||||    
T  26417661 cttcaattctttcagcttctgatgatcttcaactcctgatgat 26417619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 12388954 - 12388733
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||| |||| |||||||||||| |||  ||||||| ||||  |||| |||||| |||||| |||||| ||| |||||||| |||||||||    
T  12388954 gcatccaatgccttaaaattcttttgaattagtcgtagcttcactgttctgatcttctgcaattctagacatgattaaatcctttgaacaacctttgaag 12388855  T
Q  101 ctttaattctctcagcttatgatgatcttca-----------------acttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttga 183  Q
    |||||| ||||||| ||| | ||||||||||                  ||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  12388854 ctttaagtctctcatcttcttatgatcttcagctcttgatgaaaaactgcttctagtgatgttgcttctgatgaggtgcttatgatgaacttgcttctga 12388755  T
Q  184 tgacgtcgtcacttcaagagca 205  Q
    ||||||| |||||||| |||||    
T  12388754 tgacgtcatcacttcaggagca 12388733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 49642843 - 49642637
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||| ||||||| |||||||||    
T  49642843 catccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaag 49642744  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||| |||  || ||  |||||| || |||||||||||||| ||   ||||| ||||| ||||| |||||| ||||||| ||||  |||| |||||||    
T  49642743 ctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctaatgagatgcttctgatgaccttgcttctgattgcgtcatcacttc 49642644  T
Q  199 aagagca 205  Q
    | |||||    
T  49642643 aggagca 49642637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 16199752 - 16199645
Alignment:
Q  139 gtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgctt 238  Q
    |||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||| |||| ||||| |||||||||| | | |||||||||||||||||    
T  16199752 gtgatgttgcttctgatgaggtgcttcttatgaacttgcttctgatgacgtcatcagttcaggagcacttgacttcaggagcacttttcttcagatgctt 16199653  T
Q  239 caagcttc 246  Q
    ||||||||    
T  16199652 caagcttc 16199645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 15903276 - 15903528
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||| ||||||||||||  || ||| |||| |||||||||||||||||| || |||||| ||||| ||||  |||  ||||||||| ||||||    
T  15903276 gcatgcaatgctttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgtaatgcttagacgagattgaatccattgaacagcgtttgaa 15903375  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||| |  | || ||| ||||||| ||   ||||||||||| || || |||||||||||||| |||||||||| ||||||    
T  15903376 gctttaagtcttgcatctcctgataaattacagcttttggtgatcttcagcttctgatgagatggttctgatgaacttgcttctgatgacgtcatcactt 15903475  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||  |||| |||||||| || | | ||| ||||||||||||||||||||||||    
T  15903476 cagaagcactttgacttaaggagcacttctcttcagatgcttcaagcttcctt 15903528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20646231 - 20646482
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||||||| ||||| | ||||||| | ||| ||| | ||   ||||||||||||| ||    
T  20646231 gcatccaatgctttcaaatcctttcaaaatagacgttgcttcactcttctggtcttctacaatgcttggacgagatgaaatacattgaacagccttttaa 20646330  T
Q  100 -gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
     ||||||| |||  || ||  |||||| || |||||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  20646331 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcact 20646430  T
Q  197 tcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    ||| || || ||||||||||| | | ||| |||||| | |||| ||||||||    
T  20646431 tcatgaacactttgacttcaggagcacttctcttcaaacgctttaagcttcc 20646482  T

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Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 12968385 - 12968506
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagct 102  Q
    ||||||||||||||||| |||||||||||| |||| |||||  ||||||||||| ||||||| |||| ||||||| | | ||| |||| |||||||||||    
T  12968385 atccaatgccttcaaattcttttgaattagtcgttacttcatgcttctagtcttctgcaatgatagatgtgattaaaacatttaaacaacctttgaagct 12968484  T
Q  103 ttaattctctcagcttatgatg 124  Q
    | || ||| ||||||| |||||    
T  12968485 tcaaatctttcagcttctgatg 12968506  T

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Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 31303464 - 31303718
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||| |||| |||||||||||||  || |||  ||||||||||||||  |||||| ||||||||| ||||| ||||| ||   ||||||| ||||| |||    
T  31303464 catcaaatgtcttcaaatcctttcaaaatagttgttccttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttaaag 31303563  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgctt---ttgatgacgtcgtcac 195  Q
    |||||| ||| ||| ||  |||  | ||  | ||||||||||| ||   ||||||||||| ||||| ||||||||||||||    |||||||||| ||||    
T  31303564 ctttaagtctttcatctcctgagtaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgacgtcatcac 31303663  T
Q  196 ttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| ||||| ||||||||||| | | ||| ||||||||||||| ||||||||||    
T  31303664 ttcaggagcactttgacttcaggagcacttctcttcagatgctttaagcttcctt 31303718  T

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Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 41495202 - 41495303
Alignment:
Q  149 ttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||||||||| ||||| |||||||||||||| ||||||| || |||||||| ||||| ||||||||||||| | ||| ||||||||||||| ||||||||    
T  41495202 ttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcatgagcactttgacttcagaagcacttctcttcagatgctttaagcttcc 41495301  T
Q  248 tt 249  Q
    ||    
T  41495302 tt 41495303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16032602 - 16032757
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||||||  || ||| ||||  | |||||| || ||||| |||| || ||| | |||||| ||| |||||||| |||||||||    
T  16032602 gcatccaatgccttcaaatcctttcaaaatagtcgttgatacactctcctggtcttctgcagtgataggcatgattaaatcctttgaacaacctttgaag 16032701  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    |||||| ||||||| ||| |||||| |||||||||| |||||| || ||| ||||||    
T  16032702 ctttaagtctctcatcttctgatga-cttcaacttcgggtgatattgcttatgatga 16032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41495076 - 41495179
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| |||||||  |||||| ||||| |||  ||||||||||||||||    
T  41495076 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgtttagacgagattaaatccattgaacagcctttgaa 41495175  T
Q  100 gctt 103  Q
    ||||    
T  41495176 gctt 41495179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 12963021 - 12962931
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||| ||||||||||  | | ||| |||||||| |||||||||||||||    
T  12963021 tgcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactttgacttcaatagcacttctcttcagacgcttcaagcttcctt 12962931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 22804032 - 22803931
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||| |||||| | ||||| || ||||||| | | ||| |||||| ||| |||||||||||    
T  22804032 cttctgatgagatgcttctgaggaacttgcttttgatgacgtcatcactttaggagcacttaacttcaggagcacttctcttcaaatgtttcaagcttcc 22803933  T
Q  248 tt 249  Q
    ||    
T  22803932 tt 22803931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 17239003 - 17238847
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  || ||| || | |||||||||||| ||||| |||||||| |||||| ||||| |||  |||| ||||||||||||    
T  17239003 catccaatgctttcaaatcctttcaaaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaag 17238904  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    |||||| |||  || ||  | |||  ||||| ||||||||||| || ||||||||||    
T  17238903 ctttaagtcttgcatctccttatgcacttcatcttctggtgatcttgcttctgatga 17238847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 25398271 - 25398108
Alignment:
Q  84 ttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgctttt 181  Q
    ||||||| ||||||||||||||| |||  || ||||||||||    ||||||||| |||| ||   ||||| ||||| ||||| |||||||||||||| |    
T  25398271 ttgaacaacctttgaagctttaagtcttgcatcttatgatgaga--caacttctgatgatcttcagcttctaatgagatgcttctgatgaacttgcttct 25398174  T
Q  182 gatgacgtcgtcacttcaagagcatttg--acttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||||||||||||||||| ||||| |||   |||||| | | ||| |||||| |||||||||||||    
T  25398173 gatgacgtcgtcacttcaggagcacttgtatcttcaggagcgcttctcttcaaatgcttcaagctt 25398108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 12726312 - 12726169
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||||||||||||| ||||| || |||||| ||||  |||  ||||| ||||||||||    
T  12726312 gcatccaatgctttcaaatcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaa 12726213  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| |||   | ||  |||||| ||||||||||| |||||    
T  12726212 gctttaagtcttgaatctcctgatgaacttcaacttcttgtgat 12726169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 28582183 - 28582289
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||| | |||||||||  || ||| |||| ||||||||||| | |||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  28582183 gcatccaatgccattaaatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattgaacagcctttgaa 28582282  T
Q  100 gctttaa 106  Q
    |||||||    
T  28582283 gctttaa 28582289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46349926 - 46349826
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  |||||| |||| ||||||| ||| |||||| |||||||| |||||| |||| ||||  ||||||| | ||||||    
T  46349926 gcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaacaacttttgaa 46349827  T
Q  100 g 100  Q
    |    
T  46349826 g 46349826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47207783 - 47207889
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc--tagacgtgattagatcttttgaacagcctttga 98  Q
    |||||||||||||||||||| |||  || |||||||| ||||||| ||| |||||| ||||||||  |||||| ||||| |||  ||||||| |||||||    
T  47207783 gcatccaatgccttcaaatcatttcaaactagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattgaacaacctttga 47207882  T
Q  99 agcttta 105  Q
    || ||||    
T  47207883 agtttta 47207889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2561265 - 2561371
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||  |||||||||||||  || |||  ||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  2561265 gcatccaatttcttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 2561364  T
Q  100 gctttaa 106  Q
    |||||||    
T  2561365 gctttaa 2561371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14969404 - 14969510
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||| |||||||||||  || |||  ||| ||| ||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  14969404 gcatccaatgccatcaaatcctttcaaaatagttgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 14969503  T
Q  100 gctttaa 106  Q
    |||||||    
T  14969504 gctttaa 14969510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23538248 - 23538146
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||| |||||||||||||| |||||||| || |||||  |||| ||||| |||||| ||||||| ||| |||||||| | | ||||||||  ||||||||    
T  23538248 gcattcaatgccttcaaattcttttgaaataaccgttgtttcattcttccagtcttctgcaatgataggcgtgattaaaacatttgaacaaactttgaag 23538149  T
Q  101 ctt 103  Q
    |||    
T  23538148 ctt 23538146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 37467541 - 37467631
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| || ||| ||||||| |||||||||| |||||||| ||||  ||||||||||| | | ||| ||||||||||||||||||||||||    
T  37467541 tgcttctggtgatcttgcttctgatgacgtcatcacttcaggagctctttgacttcaggagcacttatcttcagatgcttcaagcttcctt 37467631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 47405502 - 47405398
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||| ||||||||||||||||||  || |||  ||| ||||| | ||| |||||| ||||||||| ||||| ||||| |||  |||||||||||||||||    
T  47405502 catcaaatgccttcaaatcctttcaaactagttgttgcttcatttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaag 47405403  T
Q  101 cttta 105  Q
    |||||    
T  47405402 cttta 47405398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 40799953 - 40800056
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagc 101  Q
    ||||||| ||||||||| ||||  || ||| |||| |||| || ||| |||||| ||||||||| ||||| ||||| |||  ||||||||||||||||||    
T  40799953 atccaattccttcaaatactttcaaactagtcgttgcttcgcttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagc 40800052  T
Q  102 ttta 105  Q
    ||||    
T  40800053 ttta 40800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 49553570 - 49553407
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |  | ||||||||||  | |||| ||||||||| |||||   ||| |||| || |||||||||||||     
T  49553570 catccaatgccttcaaatcctttcaaaatagtcactgcttcactctttcaatcttctgcaatgcttagacgatgttaaatctattaaacagcctttgaaa 49553471  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgctt 164  Q
    |||||| |||  || ||  |||||| ||||  ||||||||||| || ||||||||||| |||||    
T  49553470 ctttaagtcttgcatctcctgatgaacttcggcttctggtgatcttacttctgatgagatgctt 49553407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37467410 - 37467516
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| | |||||| |||| | ||||| |||  |||||||  |||||||    
T  37467410 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaagctttgaa 37467509  T
Q  100 gctttaa 106  Q
    | |||||    
T  37467510 gatttaa 37467516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38177725 - 38177619
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||| | |||| |||| |||| ||||| ||||| ||   ||||||| ||||||||    
T  38177725 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccaatcttctgcattgctcagacgagattaaattcattgaacaacctttgaa 38177626  T
Q  100 gctttaa 106  Q
    |||||||    
T  38177625 gctttaa 38177619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13780666 - 13780601
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct 66  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||  |||||| |||||||||    
T  13780666 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgct 13780601  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19889027 - 19888962
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct 66  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||| ||| |||||||||||||||    
T  19889027 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcatctggtcttttgcaatgct 19888962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 26417564 - 26417520
Alignment:
Q  206 tttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||    
T  26417564 tttgtctttagaacctattttcttcagatgcttcaagcttccttc 26417520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 13824265 - 13824316
Alignment:
Q  154 atgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  13824265 atgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 13824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18121704 - 18121454
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || |||  ||| ||||||||||| |||||| ||||||||| | ||| ||||  |||  ||||||| ||||||||    
T  18121704 gcattcaatgcctttaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaa 18121605  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatg-aggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||| |||  ||| ||||| |  ||||| |||||||||||||| |||||| |||  |||     
T  18121604 gctttaaatcttgcatctcctgatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgatgaacttgcttctgatgatgtcaccacg 18121505  T
Q  197 tcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||| ||||| |||| |||||| | |  || |||||||| |||| |||||||    
T  18121504 tcaggagcactttgtcttcaggagcagttctcttcagacgctttaagcttc 18121454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11223640 - 11223742
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||  |||||| |||||||| |||||| ||||  | |  ||||||||| ||||||    
T  11223640 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattgaacagcttttgaa 11223739  T
Q  100 gct 102  Q
    |||    
T  11223740 gct 11223742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18142834 - 18142728
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || |||  ||| ||||||||||| |||||| ||||||||| | ||| ||||  |||  ||||| ||||||||||    
T  18142834 gcattcaatgcctttaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaatagcctttgaa 18142735  T
Q  100 gctttaa 106  Q
    |||||||    
T  18142734 gctttaa 18142728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 53056809 - 53056747
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||    
T  53056809 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 53056747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 2561414 - 2561503
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||| |||  ||||||||||||| |||| |||||| | |  || |||||||| |||| ||||||||||    
T  2561414 gcttctgatgaacttgcttctgatgatgtcaccacttcaagagcactttgtcttcaggagcagttctcttcagacgctttaagcttcctt 2561503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 13824147 - 13824252
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| |||  || |||  ||| ||||||||||| |||||| | || ||  |||||| ||||| |||  ||||||| |||||||||    
T  13824147 catccaatgccttcaaatcatttcaaaatagttgttgcttcactcttccagtcttcttcattgtttagacgagattaaatccattgaacaacctttgaag 13824246  T
Q  101 ctttaa 106  Q
    ||||||    
T  13824247 ctttaa 13824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 49666336 - 49666291
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  49666336 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 49666291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 11223792 - 11223876
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  || ||||||||||||| || |||||||    
T  11223792 tgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttctcttcagatgctttaaacttcctt 11223876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 30054161 - 30054117
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  30054161 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagca 30054117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 46796312 - 46796268
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  46796312 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 46796268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 22272205 - 22272454
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||| |||||||||| | || ||||| ||||| |||||| ||||||| |||||||||||| ||| |||||||| ||||||||     
T  22272205 gcatccaatgccttcaaatccatttgaattagtcattgcttcattcttccagtcttctgcaatgatagacgtgattaaatcatttgaacaacctttgaaa 22272304  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    ||  |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| || ||||||||||| || | |||||||| ||||||||     
T  22272305 ctccaattctctcagcttctgatgatcttcagcttctggtgatgttgcttctgatgaggtgtttctgatgaacttgtttctaatgacgtcatcacttcag 22272404  T
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||| |||||||||||||| ||||||||||||| |||||||| ||||||||    
T  22272405 gagtatttgacttcagaaactcttttcttcagttgcttcaaccttccttc 22272454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 41121745 - 41121577
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagct 102  Q
    |||||||||||||||||||||||||||||| | || |||||||| || | |||| ||||||||||| |||||||| ||| ||||||||||||||||||||    
T  41121745 atccaatgccttcaaatccttttgaattagtctttgcttcactcatccaatcttctgcaatgctaggcgtgattaaatcctttgaacagcctttgaagct 41121646  T
Q  103 ttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    ||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||||| | ||||||    
T  41121645 ttaattctcacagcttctgatgatcttcagcttctggtgatgttgcttctgatgaggtgcatctgatga 41121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 44881240 - 44881473
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagc 101  Q
    ||||||||||||||||| || ||||||||||| | | ||||| ||||| |||||| ||||||| ||||||||||||  || |||||||||||||||||||    
T  44881240 catccaatgccttcaaacccatttgaattagctgctgcttcattcttccagtcttctgcaatgatagacgtgattaagtcatttgaacagcctttgaagc 44881339  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaag 201  Q
    || |||| ||||||||| |||||||||||| ||| |||||||||| ||||||||||||               ||||| ||||||||||  ||||||| |    
T  44881340 ttcaattatctcagcttctgatgatcttcagcttttggtgatgttgcttctgatgagg---------------tgcttctgatgacgtcagcacttcagg 44881424  T
Q  202 agcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||    
T  44881425 agcacttgacttcaaaatctcttttcttcagatgcttcaagcttccttc 44881473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 22455018 - 22454767
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagccttt-gaa 99  Q
    ||||||||||||||||| | | ||||||||| | ||| |||||||||||| ||||| ||||||| | | |||||||| |||  ||||||| ||||| |||    
T  22455018 gcatccaatgccttcaacttcatttgaattaactgttgcttcactcttctggtcttctgcaatgttgggcgtgattaaatccattgaacacccttttgaa 22454919  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| ||||||| ||| ||| || ||||| ||||||||||| ||   ||||||||||||||||| |||||| ||||||| ||| |||||  ||||||    
T  22454918 gctttaagtctctcatcttctgaagaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgagcttgcttctgacgacgttatcactt 22454819  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||| | |||||||| | | ||||||||||||||||||||||||||||    
T  22454818 caagagcactagacttcaggagcacttttcttcagatgcttcaagcttcctt 22454767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 23595595 - 23595427
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagct 102  Q
    ||||||||||||||||| | |||||||||| |||| |||||||||||| ||||| |||||||||||  ||||||| ||| |||||||| |||||||||||    
T  23595595 atccaatgccttcaaattcatttgaattagtcgttgcttcactcttctggtcttctgcaatgctaggtgtgattaaatcctttgaacaacctttgaagct 23595496  T
Q  103 ttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    |||||||| ||| ||| |||||||||||| ||||||||||  || ||||||||||||||||| ||||||    
T  23595495 ttaattctttcatcttctgatgatcttcagcttctggtgaacttgcttctgatgaggtgcttctgatga 23595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 30667061 - 30667313
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||| ||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  30667061 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 30667160  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||||||||||  || ||  |||||| || ||||||||| |  | ||   ||||||||||| ||||| ||| |||||||||| |||||||||| ||||||    
T  30667161 gctttaattcttgcatctcctgatgaactacaacttctgatattcttcagcttctgatgagatgcttctgacgaacttgcttctgatgacgtcatcactt 30667260  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||| | | | ||| ||||||||||||||||||||||||    
T  30667261 caggagcactttgacttcgggagcacttctcttcagatgcttcaagcttcctt 30667313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23235079 - 23235327
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||| ||||  || ||| |||| ||| ||||||| |||||| ||||||||| ||||| ||||| |||  ||||||||||||||||    
T  23235079 gcatccaatgccttcaaattctttcaaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 23235178  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || || ||||||| ||  | ||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  23235179 gctttaagtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 23235278  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    || ||||| ||||||||||  | | ||| |||||||| |||| ||||||    
T  23235279 caggagcactttgacttcaagagcacttctcttcagacgctttaagctt 23235327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 24850694 - 24850442
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagccttt-ga 98  Q
    ||||||||||| || |||||||||  || ||  |||| |||||||||||| |||||  ||||||| |||||| ||||| |||  ||||||| ||||| ||    
T  24850694 gcatccaatgctttgaaatcctttcaaaatattcgttgcttcactcttctggtcttcagcaatgcgtagacgagattaaatccattgaacaaccttttga 24850595  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    |||||||| |||  || ||  |||||  ||||| | ||||||||| |||  ||||||||||||||||| |||||||||||||| ||| |||||| | |||    
T  24850594 agctttaagtcttgcatctcctgatgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgatgaacttgcttctgacgacgtcattact 24850495  T
Q  197 tcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||| ||||| |||||||||| | | ||||||||||||||||||||||||||||    
T  24850494 tcaggagcacttgacttcaggagcacttttcttcagatgcttcaagcttcctt 24850442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18430968 - 18430838
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||| |||||||||||||| ||||||||||||||||| |||||  ||||||||||| ||||||| ||| |||||||| | | |||||||| |||||||||    
T  18430968 gcattcaatgccttcaaattcttttgaattagccgttgcttcatgcttctagtcttctgcaatgataggcgtgattaaaacatttgaacaacctttgaag 18430869  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    |||||||||| ||||||| ||||||||||||    
T  18430868 ctttaattctttcagcttctgatgatcttca 18430838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 18702810 - 18702952
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||  ||||||||||| || |||| |||||||||||| | | |||||||| |||||||||    
T  18702810 gcatctaatgccttcaaattcttttgaattagccgttacttcatgcttctagtcttctgtaatgatagacgtgattaaaacatttgaacaacctttgaag 18702909  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||| |||||| ||||||| ||||||||||||||| ||| ||||    
T  18702910 cttcaattctttcagcttctgatgatcttcaactcctgatgat 18702952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10009778 - 10009572
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctag-tcttttgcaatgctag-acgtgattagatcttttgaacagcctttga 98  Q
    ||||||||||| ||||||||||||  || |||  ||| |||||||| ||| | |||||||||||||| | ||| ||||  |||  |||||||||| ||||    
T  10009778 gcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcctcttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttga 10009679  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||||| |||  || ||  |||||| ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||| |||||||    
T  10009678 agctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttc 10009579  T
Q  199 aagagca 205  Q
    | |||||    
T  10009578 aggagca 10009572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19540488 - 19540659
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||| |||||||| ||||| ||| |||||||| ||||||||| |||||||| ||||||||| ||| | ||||| |||  ||||||| | ||||||    
T  19540488 gcatccaataccttcaaaacctttcgaaatagccgttgcttcactctcctagtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaa 19540587  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    ||||||| |||  || || ||||||| ||||| ||||||||||| || ||||||||||||||||| ||||||    
T  19540588 gctttaagtcttgcatctcatgatgaacttcagcttctggtgatcttgcttctgatgaggtgcttctgatga 19540659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22188130 - 22187923
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||  ||  || |||  ||| ||||||||||  |||||| |||||| || ||||| ||||| |||  ||||||||||||||||    
T  22188130 gcatccaatgccttcaaatctattcaaaatagttgttgcttcactctttcagtcttctgcaatacttagacgagattaaatccattgaacagcctttgaa 22188031  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  ||  |  |||||| ||||||||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  22188030 gctttaagtcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 22187931  T
Q  198 caagagca 205  Q
    || |||||    
T  22187930 caggagca 22187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 22260516 - 22260686
Alignment:
Q  39 cttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttct 137  Q
    ||||||| ||| |||||| ||||||||| ||||| ||||| |||  ||||||| | ||||| ||||||| |||  || ||  |||||| ||| |||||||    
T  22260516 cttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatgagctttaacttct 22260615  T
Q  138 ggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcattt 208  Q
    |||||| || ||||||||||| ||||| |||||||||||||| |||||||||| |||||||| ||||||||    
T  22260616 ggtgatcttccttctgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcattt 22260686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 21537276 - 21537040
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||| |||| |||||  || ||| |||| |||||||||||| ||||| ||||||| | | ||| ||||| |||  ||||||| ||||||||    
T  21537276 gcatccaatgcctccaaaacctttcaaaatagtcgttgcttcactcttctggtcttctgcaatgtttaaacgagattaaatccattgaacaacctttgaa 21537177  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||||| ||||| ||||| |||  ||||||||||||||||| || ||| ||||||| |||||||||| | ||||    
T  21537176 gctttaagtcttgcatctcctgatgaacttcatcttctagtgatctttaacttctgatgaggtgcttctggtgagcttgcttctgatgacgtcattactt 21537077  T
Q  198 caagagcatttgacttcagaacctcttttcttcagat 234  Q
    || ||||| | |||||||| | | ||| |||||||||    
T  21537076 caggagcactagacttcaggagcacttctcttcagat 21537040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 23184333 - 23184170
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagct 102  Q
    ||||||||||||||||| | |||||||||| ||| | ||||||||||| ||||| |||| ||||||  ||||||| ||| |||||||| |||||||||||    
T  23184333 atccaatgccttcaaattcatttgaattagtcgtgc-ttcactcttctggtcttctgca-tgctaggtgtgatta-atcctttgaacaacctttgaagct 23184237  T
Q  103 ttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    | |||||| ||| ||| |||||||||||| ||||||||||  || ||||||||||||||||| ||||||    
T  23184236 t-aattct-tcatcttctgatgatcttcagcttctggtgaacttgcttctgatgaggtgcttctgatga 23184170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 26619129 - 26618983
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||| |||||||||||||| |||||||| |||  ||| ||||| ||||| |||||| ||||||| ||| |||||||| ||| |||||||| |||||||||    
T  26619129 gcattcaatgccttcaaattcttttgaaatagttgttgcttcattcttccagtcttctgcaatgataggcgtgattaaatcatttgaacaacctttgaag 26619030  T
Q  101 ctttaattctctcagcttatgatgatcttc--aacttctggtgatgt 145  Q
    ||| |||||| ||||||| || ||||||||  |||||||| ||||||    
T  26619029 cttcaattctttcagcttctgttgatcttcagaacttctgatgatgt 26618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 25037286 - 25037096
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgcta-gacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  |||||| |||| | ||||||||| |||||| |||||||||  |||  ||||  |||  ||||||| |||||||||    
T  25037286 catccaatgctttcaaatcctttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaag 25037187  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgt 189  Q
    |||||| |||  || ||  |||||| || |||||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||    
T  25037186 ctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt 25037096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 25041393 - 25041203
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgcta-gacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  |||||| |||| | ||||||||| |||||| |||||||||  |||  ||||  |||  ||||||| |||||||||    
T  25041393 catccaatgctttcaaatcctttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaag 25041294  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgt 189  Q
    |||||| |||  || ||  |||||| || |||||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||    
T  25041293 ctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt 25041203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 25829206 - 25829363
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  25829206 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaa 25829305  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||| ||| |||  || ||  |||||| ||| | ||||||||||| || ||||||||||    
T  25829306 gctctaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatga 25829363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 9015398 - 9015149
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || |||  |||  |||||||||| |||||| ||||||||| ||||  ||||| |||  ||||||| ||||||||    
T  9015398 gcatccaatgctttcaaatcctttcaaaatagttgttgtttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaa 9015299  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||| |  |||||| ||| ||   ||||||||||| || || |||||||||||||| |||||||||| ||||||    
T  9015298 gctttaagtcttgcatctcctgatgaactttagtttctgg-gatcttctgcttctgatgagttgtttctgatgaacttgcttctgatgacgtcatcactt 9015200  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    || || || ||| ||||||  | | ||| ||||||||||||||||||||||    
T  9015199 caggatcacttttacttcaagagcacttctcttcagatgcttcaagcttcc 9015149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 39037670 - 39037433
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||| | | ||||||||||||||| ||||||| | ||| |||| ||||||||| ||||| ||| | |||   |||||| ||||||||    
T  39037670 gcatctaatgccttcaacttcatttgaattagccgttgcttcactttcctaatcttctgcaatgcttagacgagatcaaatccaatgaacaacctttgaa 39037571  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    | ||||| ||||||| ||| |||| | ||| |||||| ||||||    |||| |        ||| |||||||||||||| |||||||||| ||||||||    
T  39037570 gttttaagtctctcatcttctgatcaactttaacttccggtgat----cttcag--------cttctgatgaacttgcttctgatgacgtcatcacttca 39037483  T
Q  200 agagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
      |||| || ||||||| | | ||| ||||||||||||||||||||||||    
T  39037482 gaagcacttaacttcagtagcacttctcttcagatgcttcaagcttcctt 39037433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 40782676 - 40782794
Alignment:
Q  133 cttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgac-ttcagaacctcttttcttc 230  Q
    ||||||||||| || ||||||||||  ||||| || ||||||||||| |||||||||| |||||||| ||||| |||||| ||||| | | ||| |||||    
T  40782676 cttctggtgatcttgcttctgatgaaatgcttctggtgaacttgcttctgatgacgtcatcacttcaggagcactttgactttcaggagcacttctcttc 40782775  T
Q  231 agatgcttcaagcttcctt 249  Q
    |||||||||||||||||||    
T  40782776 agatgcttcaagcttcctt 40782794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20568778 - 20568571
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || | |  ||| ||||||||||| |||||| |||||||| |||||| ||||| |||  | ||||||||||| ||    
T  20568778 gcatccaatgccttcaaatcctttcaaaattgttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatggaacagcctttaaa 20568679  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| || || ||||||||||| ||   ||||| ||||| ||||| ||||||||||||||   |||||||| |||| |    
T  20568678 gctttaagtcttgcatctcctgatgaactacagcttctggtgatcttgaacttcttatgagatgcttctgatgaacttgcttcaaatgacgtcatcacct 20568579  T
Q  198 caagagca 205  Q
    || |||||    
T  20568578 catgagca 20568571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 18376934 - 18376791
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  |||  |||||| ||  | |||| ||||||||| ||||| ||||| |||  ||||||||||||||||    
T  18376934 gcatccaatgccttcaaatcctttcaaaatagtagttgattcactattaaaatcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 18376835  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| ||||||| |||   |||| |||||||||||||||||    
T  18376834 gctttaagtctctcatcttcaaatgaacttcaacttctggtgat 18376791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 25189472 - 25189583
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagct 102  Q
    ||||||||||||||| | | |||||||||| | || ||||||||| || ||||| |||||||||||  ||||||| |||  ||||||| |||||||||||    
T  25189472 atccaatgccttcaacttcatttgaattagtcattgcttcactctcctggtcttctgcaatgctaggtgtgattaaatccattgaacaacctttgaagct 25189571  T
Q  103 ttaattctctca 114  Q
    |||| |||||||    
T  25189572 ttaagtctctca 25189583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24377173 - 24377332
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    |||||||||||  ||||| |||||  || ||| |||| |||||||||||| ||||| ||||||||||| |||||||| |||  ||||||| || ||||||    
T  24377173 gcatccaatgctctcaaaacctttcaaaatagtcgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatccattgaacaaccttttgaa 24377272  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| |||  ||||||||||    
T  24377273 gctttaagtcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatga 24377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 28140514 - 28140427
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcaga 233  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||  ||||||||||| | | ||| ||||||||    
T  28140514 cttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcacttttgacttcaggagcacttctcttcaga 28140427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20152063 - 20151956
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || || ||||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||||| | ||||||    
T  20152063 gcatccaatgccttcaaatcctttcaaactaaccgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaa 20151964  T
Q  100 gctttaat 107  Q
    ||||||||    
T  20151963 gctttaat 20151956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 6574150 - 6574045
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc--tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||||  |||||| ||||| |||  ||||||| ||||||||    
T  6574150 catccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaa 6574051  T
Q  100 gcttta 105  Q
    ||||||    
T  6574050 gcttta 6574045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 7609039 - 7609213
Alignment:
Q  7 aatgccttcaaatccttttgaattagccgttccttcactcttctag-tcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaagcttt 104  Q
    ||||||||||||||||||  || |||  ||| |||||||| ||| | ||||||| |||||| | ||| ||||  |||  |||||||||| ||||||||||    
T  7609039 aatgccttcaaatcctttcaaaataggtgttgcttcactcctcttggtcttttgtaatgcttggacgagattgaatccattgaacagcccttgaagcttt 7609138  T
Q  105 aattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgctt 179  Q
    || |||  || ||  |||||| ||| | ||||||||||| || ||||||||||| ||||| ||||||||||||||    
T  7609139 aagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgctt 7609213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19115155 - 19115285
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||| || ||||| |||| | ||||||||  ||| ||||| ||||| |||||| ||||||  ||| || ||||| ||  |||||||| |||||||||    
T  19115155 gcatccactggcttcacatccatctgaattagttgttgcttcattcttccagtcttctgcaatagtaggcgagattaaattctttgaacaacctttgaag 19115254  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    ||| |||||| ||||||| ||||||||||||    
T  19115255 cttcaattctttcagcttctgatgatcttca 19115285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22317665 - 22317874
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaat-tagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttga 98  Q
    |||||||||||||| |||||||||  ||  ||| |||| |||||||||||||||||| |||||||| |||| | ||||| |||   |||| |||||||||    
T  22317665 gcatccaatgcctttaaatcctttcaaaaatagtcgttgcttcactcttctagtcttatgcaatgcttagatgagattaaatccaatgaaaagcctttga 22317764  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatg-aggtgcttatgatgaacttgcttttgatgacgtcgtcac 195  Q
    |||||||| |||  || ||  ||||||  |  | ||||||||||| ||   ||||||||| |  |||||||||||||||||||| ||||||||||  |||    
T  22317765 agctttaagtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatgatgacgtcaccac 22317864  T
Q  196 ttcaagagca 205  Q
    |||| |||||    
T  22317865 ttcaggagca 22317874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 30621289 - 30621398
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| || | ||||||||||| |||||| |||||||| || ||| ||||| |||  ||||||| ||||||||     
T  30621289 catccaatgccttcaaatcctttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaac 30621388  T
Q  101 ctttaattct 110  Q
    ||||||||||    
T  30621389 ctttaattct 30621398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 30623910 - 30624019
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| || | ||||||||||| |||||| |||||||| || ||| ||||| |||  ||||||| ||||||||     
T  30623910 catccaatgccttcaaatcctttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaac 30624009  T
Q  101 ctttaattct 110  Q
    ||||||||||    
T  30624010 ctttaattct 30624019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 38781476 - 38781675
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||||||||||||||||  || |||  ||| ||||||| ||| |||||| | || || | ||||| ||||| |||  ||||||| |||||||||||||    
T  38781476 caatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctacattgtttagacgagattaaatcaattgaacaacctttgaagcttt 38781575  T
Q  105 aattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaaga 202  Q
    || |||  || | | ||||||    || ||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| |||||||| ||    
T  38781576 aagtcttgcatcctctgatgaga--catcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcagga 38781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13964006 - 13963900
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||| ||||  || ||| |||| ||||||||||  |||||| | |||||| |||||| ||||| |||  ||||||| ||||||||    
T  13964006 gcatccaatgccttcaaattctttcaaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaa 13963907  T
Q  100 gctttaa 106  Q
    |||||||    
T  13963906 gctttaa 13963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 19115411 - 19115449
Alignment:
Q  212 ttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  19115411 ttcagaacctcttttcttcagacgcttcaagcttccttc 19115449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 40782550 - 40782614
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct 66  Q
    |||||||||| ||||||||||||  || ||| |||| |||||||| ||| |||||||||||||||    
T  40782550 catccaatgctttcaaatcctttcaaaatagtcgttgcttcactcctctggtcttttgcaatgct 40782614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 6574003 - 6573914
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| ||||||||||   |||| | ||||| |||| |||||||| |  ||||||||||||| || ||||||||||    
T  6574003 gcttctgatgaacttgcttctgatgacgtcactactttaggagcactttgtcttcagaagcatttttcttcagatgttttaagcttcctt 6573914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 18703064 - 18703097
Alignment:
Q  217 aacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||||||||||||| ||||||||||||||||    
T  18703064 aacctcttttcttcagacgcttcaagcttccttc 18703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 22785532 - 22785487
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||| ||| ||||||||||||||    
T  22785532 tgcttttgatgaacttgcttctgatgatgtcatcacttcaagagca 22785487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 24576284 - 24576373
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||| ||||||| |||||||||| ||||||||  |||| ||||||||||  | | ||| |||||| ||| |||||||||||||    
T  24576284 gcttctgatgaccttgcttctgatgacgtcatcacttcagaagcactttgacttcatgaacacttatcttcatatgtttcaagcttcctt 24576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 33074459 - 33074504
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  33074459 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 33074504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 19540654 - 19540718
Alignment:
Q  181 tgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||||||||| |||||||| ||||| | |||||||| | | |||||||||||| |||| ||||||    
T  19540654 tgatgacgtcatcacttcaggagcactagacttcaggaacacttttcttcagacgctttaagctt 19540718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 28550809 - 28550765
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  28550809 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagca 28550765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 40332297 - 40332341
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  40332297 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagca 40332341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 6641762 - 6642005
Alignment:
Q  7 aatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagctttaa 106  Q
    |||||||||||||||||||||||||||||||  |||||||||||  |||| | ||||||||| | |||||| ||| |||||||| |||||||||||||||    
T  6641762 aatgccttcaaatccttttgaattagccgttgtttcactcttctgatcttctacaatgctaggcatgattaaatcctttgaacaacctttgaagctttaa 6641861  T
Q  107 ttctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcat 206  Q
     ||||||| ||| ||||||  |||| ||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||     
T  6641862 atctctcatcttctgatgaaattcagcttctggtgatattgcttctgatgaggtgcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac 6641961  T
Q  207 ttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||||||||| | | |||||||||||||||||||||||||||    
T  6641962 ttgacttcagaagcacatttcttcagatgcttcaagcttccttc 6642005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 40846171 - 40846378
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    ||||||||||| ||||| | | |||||||||| |||| ||||||| | || ||||| ||||||||||| |||||||| |||  |||||||||| ||||||    
T  40846171 gcatccaatgctttcaacttcatttgaattagtcgttgcttcactttcctggtcttctgcaatgctaggcgtgattaaatccattgaacagccttttgaa 40846270  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| ||||||| ||| |||||| ||||| |||| |||||| ||   ||||||||||| ||||| ||||||||||| || |||||||||| ||||||    
T  40846271 gctttaagtctctcatcttctgatgaacttcagcttccggtgatcttcagcttctgatgagatgcttctgatgaacttgtttctgatgacgtcatcactt 40846370  T
Q  198 caagagca 205  Q
    || |||||    
T  40846371 caggagca 40846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 45833466 - 45833719
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||| ||||  || |||  ||| ||| ||||||| |||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  45833466 gcatccaatgcattcaaatactttcaaaatagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 45833565  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||| |||  ||||||||||| |||||||||| ||||||||| |||||||||| ||||||    
T  45833566 gctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgataaacttgcttctgatgacgtcatcactt 45833665  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||||  |||| |||||| | | ||| | ||||||||||||||||||||||    
T  45833666 caagagcacttttgtcttcaggagcgcttcttttcagatgcttcaagcttcctt 45833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11915772 - 11915900
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||| |||||| ||| |||| |||||||||| ||||||| ||||||| | | |||||||| ||| ||||| ||||||||||||    
T  11915772 gcatccaatgccttcaaatccatttgaaatagtcgttgcttcactcttttagtcttctgcaatgatgggcgtgattaaatcatttgagcagcctttgaag 11915871  T
Q  101 ctttaattctctcagcttatgatgatctt 129  Q
    ||| |||||||||||||| ||||||||||    
T  11915872 cttcaattctctcagcttctgatgatctt 11915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41114809 - 41114679
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| | |||||| |||||||| ||||| ||||||||||||||||||||  || | |||||| |||  ||||||| |||||||||    
T  41114809 gcatccaatgccttcaaattcatttgaaatagccgttgcttcattcttctagtcttttgcaatgacaggcttgattaaatcaattgaacaacctttgaag 41114710  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    ||| |||||||||||||| ||||||||||||    
T  41114709 cttcaattctctcagcttctgatgatcttca 41114679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 16632514 - 16632762
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagc 101  Q
    |||||||||||||||||| |||  || ||| ||||  |||||||||| |||||| ||||||||| | ||| ||||| |||  ||||||| ||||||||||    
T  16632514 atccaatgccttcaaatcttttcaaaatagtcgttgattcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagc 16632613  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaag 201  Q
    ||||| |||  || ||  |||||| ||| | ||||| ||||| || ||||||||||| ||||| |||||| ||||||| |||||  ||| ||||||||      
T  16632614 tttaagtcttgcatctcctgatgaactttagcttctagtgatcttgcttctgatgagatgcttttgatgaccttgcttctgatggtgtcatcacttcaga 16632713  T
Q  202 agca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||| || | | ||| ||||||||||||||||||||||||    
T  16632714 agcactttgactttaggagcacttctcttcagatgcttcaagcttcctt 16632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 14604946 - 14604695
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaat-tagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttga 98  Q
    ||||||||||| ||||||||||||| ||  |||  ||| |||||||||||||||||| ||||||||| ||||| ||||  |||  | ||| |||||||||    
T  14604946 gcatccaatgctttcaaatccttttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttga 14604847  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||||| |||   | ||  ||||||  || | |||||| |||| || ||||||||||| ||||| |||||||||||||| |||||||||| | |||||    
T  14604846 agctttaagtcttggatctcctgatgaagtttagcttctgatgatcttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttc 14604747  T
Q  199 aagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | ||||| ||||||||||| | | ||| |||||||| | |||||||||||||    
T  14604746 aggagcactttgacttcaggagcacttctcttcagacgtttcaagcttcctt 14604695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37435574 - 37435387
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||| | |||| ||||||||| | ||| ||||| |||  ||||||| ||||||||    
T  37435574 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattgaacaacctttgaa 37435475  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| || | ||||||||| ||||| |||||||||||||| |||||||    
T  37435474 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcctctgatgagatgcttctgatgaacttgcttctgatgac 37435387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 12601173 - 12601424
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| ||||  |||||| ||| |||||| ||||||||| ||||| ||||| |||  |||||||||||||||     
T  12601173 gcatccaatgccttcaaatcctttcaaaatagtcgttgattcactattcaagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgac 12601272  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||   ||||| ||| ||||||| ||||| || ||||||||||| ||||| | |||||  ||||||||||||| || ||||||||    
T  12601273 gctttaagtcttgcatctcgagatgagctttaacttctagtgatcttgcttctgatgagatgcttcttatgaaaatgcttttgatgacatcatcacttca 12601372  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     |||||  |||| ||| || | | ||| ||||||||||| | ||||||||||    
T  12601373 ggagcacttttgtcttaaggaacacttctcttcagatgccttaagcttcctt 12601424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 15139299 - 15139551
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||| | | |||||||||| |||| ||||||||| || ||||| |||||||| || ||| ||||| |||  ||||||| ||||||||    
T  15139299 gcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctggtcttctgcaatgcttaaacgagattaaatccattgaacaacctttgaa 15139398  T
Q  100 gctttaattctctcagcttatgatgatc-ttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
     |||||| ||| ||| ||| |||||| | || | ||||||||||| ||   ||||||| ||||||||| | ||||||||||||  || ||| || |||||    
T  15139399 tctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttctgacgaggtgcttctaatgaacttgcttccgaagacatcatcact 15139498  T
Q  197 tcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||| ||||||| || | | ||||||||||  ||||| ||||||||||    
T  15139499 tctagagcacttgacttaaggagcacttttcttcaattgcttaaagcttcctt 15139551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 56034647 - 56034803
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||  |||  || ||| |||| ||||||||||| |||||| ||||||||| | ||| ||||| |||  |||||||| ||||||||    
T  56034647 catccaatgccttcaaattatttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattgaacagtctttgaag 56034746  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    |||||| |||  || ||| |||||| ||||| ||||||||||| || ||||||||||    
T  56034747 ctttaagtcttgcatcttctgatgaacttcagcttctggtgatcttgcttctgatga 56034803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 17788047 - 17787948
Alignment:
Q  46 cttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgt 145  Q
    ||||||||||| ||||||| ||  |||||||| ||| ||||||||||||||||||||| |||||| ||||||| | ||||||||||||| ||| ||||||    
T  17788047 cttctagtcttctgcaatgataagcgtgattaaatcatttgaacagcctttgaagcttcaattctttcagcttctaatgatcttcaactcctgatgatgt 17787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12811217 - 12811016
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||  |||||| |||||||| ||||||  | || |||  ||||||| ||||||||    
T  12811217 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgaaactaaatccattgaacaacctttgaa 12811118  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  | |||| ||  | ||||||||||| |  | || |||||||| ||||| ||||||||||||||||||||||||  ||||||    
T  12811117 gctttaagtcttgcatctcctaatgaactagagcttctggtgatcttctactactgatgagatgcttctgatgaacttgcttttgatgacgttatcactt 12811018  T
Q  198 ca 199  Q
    ||    
T  12811017 ca 12811016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 22089721 - 22089876
Alignment:
Q  61 aatgctagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgag 158  Q
    |||| ||| |||||||| ||| |||||||| |||||||||||| |||||| ||| ||| |||||||||| | ||||||||||| ||   |||||||||||    
T  22089721 aatgttaggcgtgattaaatcctttgaacaacctttgaagctt-aattctttcatcttctgatgatctttagcttctggtgatcttcaacttctgatgag 22089819  T
Q  159 gtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttca 215  Q
    || ||| ||||| ||||||||   |||||||  |||||||| ||||| |||||||||    
T  22089820 gtacttctgatgcacttgcttcgaatgacgttatcacttcaggagcacttgacttca 22089876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22675559 - 22675454
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| ||||||| |||||||||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  22675559 gcatcaaatgccttcaaatcctttcaaactagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 22675460  T
Q  100 gcttta 105  Q
    ||||||    
T  22675459 gcttta 22675454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14833468 - 14833574
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||  |||| ||||||| ||||||||    
T  14833468 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaa 14833567  T
Q  100 gctttaa 106  Q
    |||||||    
T  14833568 gctttaa 14833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 13576153 - 13576048
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  |||||||| |||||||    
T  13576153 gcatctaatgccttcaaatcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaa 13576054  T
Q  100 gcttta 105  Q
    ||||||    
T  13576053 gcttta 13576048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 413079 - 413180
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||| |||||| |||||||| |||||| ||||  |||  ||||||| | |||||||||||    
T  413079 caatgccttcaaatcctttcaaattagccgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagcttt 413178  T
Q  105 aa 106  Q
    ||    
T  413179 aa 413180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 55380362 - 55380519
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    ||||||||||| ||||||||||||  || |||  ||| |||||||||||| ||||| ||||||| ||| | |||||| |||  |||||||||| ||||||    
T  55380362 gcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcttctggtcttctgcaatgttaggcatgattaaatccattgaacagccttttgaa 55380461  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  | |||| ||||| |||||| |||| || ||||||||||    
T  55380462 gctttaagtcttgcatctcctaatgaacttcagcttctgatgatcttgcttctgatga 55380519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14904395 - 14904252
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || | | |||| ||||||| ||| |||||| ||||||| ||||||| ||||| ||| |||||| ||| ||||||    
T  14904395 gcatccaatgtcttcaaatcctttcaaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatagcttttgaa 14904296  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||  |||  || ||  |||||| || ||||||||||||||    
T  14904295 gctttaggtcttgcatctcctgatgaactacaacttctggtgat 14904252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17540467 - 17540595
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||| || ||||| |||| | ||||||||  ||| ||||| ||||  |||||||||||||| ||| || ||||| ||| |||||||||||  |||||    
T  17540467 gcatccactggcttcacatccatctgaattagttgttgcttcattctttcagtcttttgcaatgataggcgagattaaatcatttgaacagcc--tgaag 17540564  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    ||| |||||| ||| ||| ||||||||||||    
T  17540565 cttcaattctttcaacttctgatgatcttca 17540595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 17540704 - 17540743
Alignment:
Q  211 cttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17540704 cttcagaacctcttttcttcagatgcttcaagcttccttc 17540743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 19884774 - 19884916
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||   |||||| ||||||||    
T  19884774 gcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatc-catgaacatcctttgaa 19884872  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| |||  || ||  |||||| || || |||||||||||    
T  19884873 gctttaagtcttgcatctcctgatgaactacagcttctggtgat 19884916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 41114591 - 41114540
Alignment:
Q  199 aagagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  41114591 aagagcacttgtcttcagaacctcttttcttcatatgcttcaagcttccttc 41114540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3483793 - 3483899
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||| ||  ||||||    
T  3483793 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaatagtttttgaa 3483892  T
Q  100 gctttaa 106  Q
    |||||||    
T  3483893 gctttaa 3483899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29680583 - 29680477
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||  ||||| |||  ||||||| |||||| |    
T  29680583 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgga 29680484  T
Q  100 gctttaa 106  Q
    |||||||    
T  29680483 gctttaa 29680477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 11915989 - 11916045
Alignment:
Q  194 acttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||| ||||| ||  |||||||||||||||||||| |||||||||||||||||||    
T  11915989 acttcaggagcacttatcttcagaacctcttttcttcggatgcttcaagcttccttc 11916045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 17787859 - 17787824
Alignment:
Q  215 agaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  17787859 agaacctcttttcttcagatgcttcaagcttccttc 17787824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19911919 - 19911776
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||  ||| |||||||||||||| | |||| ||||  |||| ||||||| ||||| ||    
T  19911919 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatctattgaacaacctttaaa 19911820  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| |||  || ||  |||||| || ||||||||| ||||    
T  19911819 gctttaagtcttgcatctcctgatgaactacaacttctgatgat 19911776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 29680421 - 29680346
Alignment:
Q  175 tgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||| |||||||| ||||| ||||||||||| | | ||| ||||||||| ||||||||||||||    
T  29680421 tgcttctgatgacgtcatcacttcaggagcactttgacttcaggaacacttctcttcagatacttcaagcttcctt 29680346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19621100 - 19620994
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||  ||| |||||||||||||| | |||| ||||  |||  ||||||| ||||||||    
T  19621100 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcacttctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaa 19621001  T
Q  100 gctttaa 106  Q
    |||||||    
T  19621000 gctttaa 19620994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 19884922 - 19885012
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcac-ttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| ||||||||||| ||| |||||||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  19884922 gcttctgatgaacttgcttctgatgacgtcgccactttcaagagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctt 19885012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 16940196 - 16940285
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||| ||||||||| |||| ||||| |||||||||||||| ||| ||||||| | |  ||||||||||| |||| ||||||||||    
T  16940196 gcttctgataaacttgcttctgattacgtcatcacttcaagagcactttaacttcaggagcagttttcttcagacgctttaagcttcctt 16940285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 19666449 - 19666550
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||| | ||||| |||||||    
T  19666449 caatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttcaagcttt 19666548  T
Q  105 aa 106  Q
    ||    
T  19666549 aa 19666550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 3105329 - 3105285
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||    
T  3105329 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagca 3105285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 6517704 - 6517748
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||    
T  6517704 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagca 6517748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 17398576 - 17398532
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||    
T  17398576 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagca 17398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 56034798 - 56034878
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||||||||||||| |||| ||||| ||||||||  |||| ||| ||||||| | | |||||||||||| |||||||||||    
T  56034798 tgatgaacttgcttctgattacgtcatcacttcagaagcacttttacttcaggatcacttttcttcagacgcttcaagctt 56034878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11901259 - 11901322
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg 64  Q
    ||||||||||||||||||  |||||||||||| |||| |||||   |||||||||| |||||||    
T  11901259 gcatccaatgccttcaaaatcttttgaattagtcgttgcttcatgtttctagtcttctgcaatg 11901322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9140984 - 9141090
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||| ||| ||| |||||| | |||||| |||||| ||||  |||  ||||||| || |||||    
T  9140984 gcatccaatgccttcaaatcctttcaaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaacccttgaa 9141083  T
Q  100 gctttaa 106  Q
    |||||||    
T  9141084 gctttaa 9141090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37985651 - 37985545
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||| ||  |||||| ||| |||| |||| | ||||| |||  ||||||| ||||||||    
T  37985651 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactttttcagtcttctgcgatgcttagatgagattaaatccattgaacaacctttgaa 37985552  T
Q  100 gctttaa 106  Q
    |||||||    
T  37985551 gctttaa 37985545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 17247321 - 17247421
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||||||||||||||||  |||||| |||| ||||||| ||| | |||| |||||||| |||||| ||||  |||  ||||||| | |||||||||||    
T  17247321 caatgccttcaaatcctttcaaattagtcgttgcttcact-ttccaatcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagcttt 17247419  T
Q  105 aa 106  Q
    ||    
T  17247420 aa 17247421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 10693070 - 10693114
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  10693070 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 10693114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 10906836 - 10906880
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  10906836 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 10906880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 14571243 - 14571287
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  14571243 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 14571287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 22191057 - 22191101
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  22191057 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagca 22191101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19470748 - 19470963
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||| ||||||||||| |||||||| |||| ||||||| |||||||||    
T  19470748 gcatccaatgccttcaaatccttttgaattagtcgttgcttcattcttctggtcttgtgcaatgctaggcgtgattaaatctgttgaacaacctttgaag 19470847  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    ||| | |||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||| |     
T  19470848 cttcagttctctcatcttttgatgatcttcaacttcttgtgatgttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcactttag 19470947  T
Q  201 gagcatttgacttcag 216  Q
    ||||| ||||||||||    
T  19470948 gagcacttgacttcag 19470963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 10640489 - 10640255
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||| |||||||| ||| |||||||| |||||||||    
T  10640489 gcatctaatgccttcaaatccttttgaattagtcgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatcctttgaacaacctttgaag 10640390  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||||||||||||||||| ||||||     || || |           || ||||||||||||| |||||||||||||| |||||||||| ||||||||     
T  10640389 ctttaattctctcagcttctgatga----aaaattgt-----------ttttgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcag 10640305  T
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10640304 gagcacttgacttcagaacctcttttcttcatatgcttcaagcttccttc 10640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26943654 - 26943847
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||| |||||| ||||| |||| ||| |||||||||||||||||| ||||||||||||| |||||| |||           ||||||||    
T  26943654 gcatccaatgccttctaatcctattgaaatagcggttgcttcactcttctagtcttctgcaatgctagacatgattaaatc-----------ctttgaag 26943742  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
     | ||||||||||| | | |||||||||||| ||| | |||||||| ||||| ||||||||||| ||| |||||||||| |||||||||| ||||||||     
T  26943743 ttataattctctcatcatctgatgatcttcagcttttagtgatgttgcttctaatgaggtgcttctgacgaacttgcttctgatgacgtcatcacttcag 26943842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 24116906 - 24117158
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttga 98  Q
    ||||||||||| ||||||||||||  || || ||| | |||||||| ||| |||||||||||||| | |||| ||||  |||  |||||||||| |||||    
T  24116906 gcatccaatgctttcaaatcctttcaaaataaccgctacttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacagccttttga 24117005  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctga-tgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||||||| |||  || ||| |||||| ||||| ||||||||||| || ||||| |  ||| ||||| ||||||||||| || |||||||||| ||||||    
T  24117006 agctttaagtcttgcatcttctgatgaacttcatcttctggtgatcttgcttctaaccgagatgcttctgatgaacttgtttctgatgacgtcatcactt 24117105  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||||| | | ||| ||||||||||||| ||||||||||    
T  24117106 caggagcactttgacttcaggagcacttctcttcagatgctttaagcttcctt 24117158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 13435615 - 13435862
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||| ||||||||||||  || ||| |||| ||||||||||| | |||| ||||||||| | ||| ||||| |||  ||||| | |||||||||||||    
T  13435615 caatgctttcaaatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttaaacgagattaaatccattgaaaatcctttgaagcttt 13435714  T
Q  105 aattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaaga 202  Q
    || |||  || ||  |||||| ||||| ||| ||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| |||||||| ||    
T  13435715 aagtcttgcatctcctgatgaacttcagcttatggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcagga 13435814  T
Q  203 gca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||| ||| |||| || | | ||| ||||||||||||||||||||||||    
T  13435815 gcacttttactttaggagcacttctcttcagatgcttcaagcttcctt 13435862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 23284642 - 23284893
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||||||||||||||||  || ||| |||| ||||||| |||| ||||| ||||||||| ||||| ||||| |||  ||||||| | ||||||    
T  23284642 gcattcaatgccttcaaatcctttcaaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaa 23284741  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||||| ||||| | ||| ||   ||||||||||| ||||| | |||||||||||| ||||||| || ||||||    
T  23284742 gctttaagtcttgcatctcctgatgaacttcagcttctagcgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacatcatcactt 23284841  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||  |||| |||||||||| | | ||| |||||||||| |||||||||||||    
T  23284842 cagaagcacttgacttcaggagcacttctcttcagatgtttcaagcttcctt 23284893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 25597558 - 25597764
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||||| |||||| | |||||| |||||| ||||| |||  ||||||| |||||||||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttctacaatgcttagacgagattaaatccattgaacatcctttgaag 25597657  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||| |||  ||  |  |||||| || |||||||||||||| ||   ||| ||||||| ||||| ||||||||||||||  ||||||||| |||||||    
T  25597658 ctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttcagatgacgtcatcacttc 25597757  T
Q  199 aagagca 205  Q
    | |||||    
T  25597758 aggagca 25597764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 15531695 - 15531446
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || || |||||  || |||||||||||||| |||||||| |||||| ||||| ||   ||||||| ||||| ||    
T  15531695 gcatccaatgccttcaaatcctttcaaaataaccgttgttttactcttctagtcttctgcaatgcttagacgagattaaattcattgaacaacctttcaa 15531596  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||| |||||| || |||||||||||||| |  |  |||||||||| ||||| |||||||||||||| |||| | ||| ||||||    
T  15531595 gctttaagtcttgcatcttctgatgaactacaacttctggtgatcttatgattctgatgagatgcttctgatgaacttgcttctgattatgtcatcactt 15531496  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    || || ||  |||| || ||| | | ||| ||||||||||||| ||||||    
T  15531495 caggatcacttttgtctacaggagcgcttctcttcagatgctttaagctt 15531446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 21625179 - 21625427
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||||||||||| ||||  ||| ||||||| ||| ||||||| | |||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  21625179 gcatgcaatgccttcaaatgctttcaaat-agccgttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 21625277  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||| ||| |||  || ||  ||||||    |||||||||||||| ||   ||||||||||| |||||||||||||||||| | ||||| |||| ||||||    
T  21625278 gctgtaagtcttgcatctcctgatgaga--caacttctggtgatcttcagcttctgatgagatgcttatgatgaacttgcctctgatg-cgtcatcactt 21625374  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcct 248  Q
    || |||||  |||| |||||||| | ||| |||||||||||||||||||||||    
T  21625375 caggagcacttttgtcttcagaagcgcttctcttcagatgcttcaagcttcct 21625427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 9717921 - 9718173
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| |||||||| |||||||||  || |||  ||| ||||||||||| |||||| | ||||| | ||||| ||||| |||  ||||||| ||||||||    
T  9717921 gcatcaaatgcctttaaatcctttcaaaatagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattgaacaacctttgaa 9718020  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||||| ||||| |||  ||||||||| | |||||||||| ||||||||| |||||||||| ||||||    
T  9718021 gctttaagtcttgcatctcctgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgataaacttgcttctgatgacgtcatcactt 9718120  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||| |||| |||||| |    || |||||||| |||| ||||||||||    
T  9718121 caagagcactttgtcttcaggagtagttctcttcagacgctttaagcttcctt 9718173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13602250 - 13602457
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||| || |||  || |||  ||| ||||||||||| |||||| |||||||| |||||  ||||| |||  ||||||| ||||||||    
T  13602250 gcatccaatgccttcaattcatttcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaa 13602349  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||||| ||||| ||   ||| ||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  13602350 gctttaagtcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 13602449  T
Q  198 caagagca 205  Q
    || |||||    
T  13602450 caggagca 13602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15987311 - 15987437
Alignment:
Q  1 gcatccaatgccttcaaatcc-ttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttga 98  Q
    ||||||||||||||||||||| |||| || ||| | || |||||||||||| ||||| ||||||||| ||||| ||||| |||  ||||||| |||||||    
T  15987311 gcatccaatgccttcaaatcccttttaaaatagtcattgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacatcctttga 15987410  T
Q  99 agctttaattctctcagcttatgatga 125  Q
    |||| ||| ||||||| ||| ||||||    
T  15987411 agctctaagtctctcatcttctgatga 15987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 3680738 - 3680807
Alignment:
Q  181 tgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||||||| ||||||||  |||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  3680738 tgatgacgtcatcacttcagcagcacttgacttcagaaccacttttcttcagatgctttaagcttccttc 3680807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 32544344 - 32544449
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||| |||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| |||||||||    
T  32544344 catccaatgcctttaaatcctttcaaaatagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaag 32544443  T
Q  101 ctttaa 106  Q
    ||||||    
T  32544444 ctttaa 32544449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 19624058 - 19624228
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||   | ||| |||| |||||||| ||| |||||||||||||| | |||| ||||  |||  ||||||| |||||||||    
T  19624058 catccaatgctttcaaatcctttcagaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaag 19624157  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    ||||||  ||  || ||  |||||| ||||| ||||||||||| ||  |||||||||| ||||| ||||||    
T  19624158 ctttaagacttgcatctcctgatgaacttcagcttctggtgatcttgtttctgatgagatgcttctgatga 19624228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 20730774 - 20730671
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||| | |||| | ||||| |||  |||||||||||||||||    
T  20730774 catccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaag 20730675  T
Q  101 cttt 104  Q
    ||||    
T  20730674 cttt 20730671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15302278 - 15302384
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||| |||||||||  || |||||||| ||||||| ||| |||||| |||||||  |||||| ||||| |||  ||||||| |||||||     
T  15302278 gcatccaatgcctttaaatcctttcaaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgac 15302377  T
Q  100 gctttaa 106  Q
    |||||||    
T  15302378 gctttaa 15302384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 26972298 - 26972193
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||| |||||||||  || |||  ||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| | |||||||    
T  26972298 catccaatgcctttaaatcctttcaaaatagttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaag 26972199  T
Q  101 ctttaa 106  Q
    ||||||    
T  26972198 ctttaa 26972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 20112621 - 20112533
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| ||| |||||||||| |||||||||| |||||||| || || ||||||| || | | ||| |||| |||||||||||||||||||    
T  20112621 gcttctgaagaacttgcttctgatgacgtcatcacttcatgaacacttgactttaggagcacttctctttagatgcttcaagcttcctt 20112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 34451586 - 34451503
Alignment:
Q  168 atgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||| |||||||||| ||||||||  ||||  |||| |||||| | | ||| ||||||||||||||||||||||||    
T  34451586 atgaacttgcttctgatgacgtcatcacttcagaagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcctt 34451503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 19624217 - 19624292
Alignment:
Q  175 tgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||| |||||| | ||||| ||||||||||| | | ||| ||||||||||||||||||||||||    
T  19624217 tgcttctgatgacgtcatcactttaggagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctt 19624292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 33351853 - 33351766
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||| |||||||||||||| ||||||| || |||||||||||||| |||| |||||| | |  ||||||||||| |||| ||||||||    
T  33351853 gcttctgatgaacttgcttctgatgacatcatcacttcaagagcactttgtcttcaggagcagttttcttcagacgctttaagcttcc 33351766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 12715491 - 12715333
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagccttt-ga 98  Q
    |||| |||||| |||||||| |||  || ||| |||| ||||||||||  | |||| ||||||||| ||||| ||||| |||  ||||||||||||| ||    
T  12715491 gcatacaatgctttcaaatcatttcaaaatagtcgttgcttcactctttcaatcttctgcaatgcttagacgagattaaatccattgaacagccttttga 12715392  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    |||||||| |||  || ||  |||||| || |||||||| ||||| || ||||||||||    
T  12715391 agctttaagtcttgcatctcctgatgaactacaacttctagtgatcttgcttctgatga 12715333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14100511 - 14100405
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||| |||||| | |||||| |||| | ||||| |||  ||||||| ||||||||    
T  14100511 gcatccaatgccttcaaatcctttcaaaatagttgtttcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacatcctttgaa 14100412  T
Q  100 gctttaa 106  Q
     ||||||    
T  14100411 actttaa 14100405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 16265074 - 16264996
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgctt 238  Q
    |||| |||||||||||||| ||||||||||| ||||||| ||||| |||| |||||| | |  ||||||||||||||||    
T  16265074 gcttctgatgaacttgcttctgatgacgtcgccacttcaggagcactttgtcttcaggagcagttttcttcagatgctt 16264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18435634 - 18435692
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttg 59  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| |||||||||||||    
T  18435634 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttctagtcttttg 18435692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 21235338 - 21235427
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||||||||  |||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  21235338 gcttctgatgaacttgcttctgatgacgtcgctacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctt 21235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18378392 - 18378496
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||| ||||||| ||||||||||||| | |||||| ||||  |||  ||||||| || |||||    
T  18378392 gcatccaatgccttcaaatcctttcaaaatagttgttgcttgactcttccagtcttttgcaatacttagacgagatttaatccattgaacaaccgttgaa 18378491  T
Q  100 gcttt 104  Q
    |||||    
T  18378492 gcttt 18378496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17927866 - 17927941
Alignment:
Q  1 gcatccaatgccttcaaa-tccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgat 75  Q
    |||||||||||||||||| | ||||||||||||||||| |||||  |||| | |||| ||||||| ||| ||||||    
T  17927866 gcatccaatgccttcaaaattcttttgaattagccgttgcttcaggcttccattcttctgcaatgataggcgtgat 17927941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 19086379 - 19086430
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcag 216  Q
    |||||||||||||| |||||||||| |||||||| ||||| |||||||||||    
T  19086379 tgatgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcag 19086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20487989 - 20487927
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || |||||||| ||||||| ||  |||||| ||||||    
T  20487989 gcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttacagtcttctgcaat 20487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 19688845 - 19688950
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| | || ||||||||||| ||| || | |||||| | |||| || || |||  ||||||| |||||||||    
T  19688845 catccaatgccttcaaatcctttcaaaatagtccttgcttcactcttccagttttctacaatgcttggacgagaataaatccattgaacaacctttgaag 19688944  T
Q  101 ctttaa 106  Q
    ||||||    
T  19688945 ctttaa 19688950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 20730628 - 20730539
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||||||||||||||| ||||||||||   |||||| ||||| |||| |||||  | |  ||||||||||| |||| ||||||||||    
T  20730628 gcttatgatgaacttgcttctgatgacgtcactacttcaggagcactttgtcttcatgagcagttttcttcagacgcttaaagcttcctt 20730539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 12348397 - 12348425
Alignment:
Q  211 cttcagaacctcttttcttcagatgcttc 239  Q
    |||||||||||||||||||||||||||||    
T  12348397 cttcagaacctcttttcttcagatgcttc 12348425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 12423446 - 12423490
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||| ||||||||| |||||||||| ||||||||||||||    
T  12423446 gcttctgataaacttgcttctgatgacgtcatcacttcaagagca 12423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 43952 - 43685
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||  |||| ||||||| ||| |||||||| ||||||||||||||||||||||    
T  43952 gcatccaatgccttcaaatctttttgaattagcctttgcttcactcttctgatcttctgcaatgttaggcgtgattaaatcttttgaacagcctttgaag 43853  T
Q  101 ctttaattctctcagcttatgatgatcttcaact-----------------tctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttga 183  Q
     ||||| ||||||| ||| |||||||||||| ||                 |||||||||||| |||||||| |||||||| |||||||||||||| |||    
T  43852 ttttaagtctctcatcttctgatgatcttcatctcctgatgaaaaactgcttctggtgatgttgcttctgattaggtgcttctgatgaacttgcttctga 43753  T
Q  184 tgacgtcgtcacttcaagagcatttg-acttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  43752 tgacgtcatcacttcaagagcacttgaacttcagaacctcttttcttcagatgcttcaagcttccttc 43685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 13880663 - 13880917
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  13880663 gcatccagtgccttcaaatccttttgaattagtcgttgcttcactcttctagtcttctgcaatgctaggcgtgattaaatcttttgaacagcctttgaag 13880762  T
Q  101 ctttaat--tctctcagcttatgatgatcttcaacttctggtga-----tgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtc 193  Q
    |||||||  ||||||  ||| ||||||| ||||||| ||| |||     || ||||  ||||  | ||||| |||||||||||||| |||||||||| ||    
T  13880763 ctttaattctctctcctcttctgatgatgttcaactcctgatgaaaaactgcttctagtgat--gttgcttctgatgaacttgcttctgatgacgtcatc 13880860  T
Q  194 acttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  13880861 acttcaggagcacttgacttcataaccacttttcttcagatgcttcaagcttccttc 13880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16316641 - 16316436
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || |||| ||| |||||||||||| ||||| |||||| || ||||||||||| |||  ||||||| ||||||||    
T  16316641 gcatccaatggcttcaaatcctttcaaaatagctgttgcttcactcttctggtcttctgcaattcttagacgtgattaaatccattgaacaacctttgaa 16316542  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || |   |||||| ||||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||||| || ||||||||    
T  16316541 gctttaagtcttgcatcccctgatgaacttcaacttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttca 16316442  T
Q  200 agagca 205  Q
     |||||    
T  16316441 ggagca 16316436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 39284647 - 39284506
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagc 101  Q
    |||||||||||||||||| | |||||||||| ||||  ||||||||||| |||||  |||||||||| |||||||| ||| |||||||||||||||||||    
T  39284647 catccaatgccttcaaattcatttgaattagtcgttgtttcactcttctggtcttcagcaatgctaggcgtgattaaatcctttgaacagcctttgaagc 39284548  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||| ||||||||| ||| |||||||||||| |||||||||||    
T  39284547 tttgattctctcatcttctgatgatcttcagcttctggtgat 39284506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 13894077 - 13893952
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagcttta 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| ||| |||||||| ||||||||||||||    
T  13894077 caatgccttcaaatccttttgaattagccgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatcctttgaacaacctttgaagcttta 13893978  T
Q  106 attctctcagcttatgatgatcttca 131  Q
    | | | ||| ||| ||||||||||||    
T  13893977 agtatttcatcttctgatgatcttca 13893952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19237127 - 19236997
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||||||  || |||||||| |||||||||||| ||||| |||||||||||||| ||||| ||| ||||||||||||||||||    
T  19237127 gcatccaatgccttcaaatcctttcaaagtagccgttgcttcactcttctggtcttctgcaatgctagacgagattaaatcctttgaacagcctttgaag 19237028  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    |||||| ||||||| ||| || | |||||||    
T  19237027 ctttaactctctcatcttctggtaatcttca 19236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 247
Target Start/End: Complemental strand, 9098271 - 9098079
Alignment:
Q  72 tgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctg-----------------gtgatgtttcttctga 154  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||                 |||||  | ||| |||    
T  9098271 tgattaaatattttgaacagcctttgaagctttaattctctcatcttctgatgatcttcagcttctgatgaaaaactgcttctggtgataatgcttttga 9098172  T
Q  155 tgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||||||||| | |||||||||||| ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  9098171 tgaggtgcttctaatgaacttgcttctgatgacatcatcacttcaggagcacttgacttcagaacctcttttcttcagatgcttcaagcttcc 9098079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10883257 - 10883008
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| || |||| | ||||| ||||| |||  ||||||| ||||||||    
T  10883257 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaa 10883158  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
     |||||| |||  || ||  |||||| || || ||||||||||| ||   ||||||||| | ||||| |||||||||||||| ||| |||||||||||||    
T  10883157 actttaagtcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtcactt 10883058  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    || ||||| ||||||||||| | | ||| |||||||| |||| |||||||    
T  10883057 caggagcactttgacttcagtagcacttctcttcagacgctttaagcttc 10883008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 11319479 - 11319731
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || |||  ||| ||||||||||  |||||| ||||||||| ||||  ||||| |||  ||||||| ||||||||    
T  11319479 gcatccaatgcattcaaatcctttcaaaatagttgttacttcactctttcagtcttctgcaatgcttagacaagattaaatccattgaacatcctttgaa 11319578  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||| || |||  || ||  |||||| || |||||||||||||| ||   ||||||||||| ||||| |||||||||||||||| |||||||| ||||||    
T  11319579 gcttgaagtcttgcatctcttgatgacctacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttttaatgacgtcatcactt 11319678  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |||| |||||| | | ||| |||||||| |||| ||||||||||    
T  11319679 caggagcactttggcttcaggagcacttctcttcagacgctttaagcttcctt 11319731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 15467990 - 15468197
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||| || ||| ||||  |||||||||| |||||| |||| || ||||||| ||||| |||| ||||||| ||||||||    
T  15467990 gcatccaatgccttcaaatccttttaaaatagtcgttgattcactcttccagtcttctgcattgcctagacgagattaaatctattgaacaccctttgaa 15468089  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | |||||||| || ||   | ||||||||| ||| |||||||||||||||| |||||||||| ||||||    
T  15468090 gctttaagtcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgatgagatgcatatgatgaacttgcttctgatgacgtcatcactt 15468189  T
Q  198 caagagca 205  Q
    ||||||||    
T  15468190 caagagca 15468197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 12366831 - 12366582
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  || |||  ||| ||||||||| | |||||| ||||||||| | ||| ||||| |||  |||||||||| ||||||    
T  12366831 catccaatgctttcaaatcctttcaaaatagttgttgcttcactctcccagtcttctgcaatgcttaaacgagattaaatccattgaacagcccttgaag 12366732  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||||| | |  || ||  |||||| ||||| ||||||||||  || ||||||||||| ||||| ||||||||||| || |||||| ||| ||||||||     
T  12366731 ctttaagttttgcacctcctgatgaacttcagcttctggtgaccttgcttctgatgagatgcttttgatgaacttgattctgatgatgtcatcacttcag 12366632  T
Q  201 gagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| ||| | ||||| | | ||| |||| |||||||||||||||||||    
T  12366631 gagcactttaaattcaggagcacttctctttagatgcttcaagcttcctt 12366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 28409114 - 28409319
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||   ||| |||||||||||||||||| ||||||| | ||||| ||||| |||  ||||||| |||||||||    
T  28409114 catccaatgccttcaaatcctttcaaaataattgttgcttcactcttctagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgaag 28409213  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtga-tgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    | |||  |||  || ||  |||||| ||| | |||||||||| |||| ||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  28409214 ccttatgtcttgcatctcttgatgaactttagcttctggtgactgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttca 28409313  T
Q  200 agagca 205  Q
     |||||    
T  28409314 ggagca 28409319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 22578100 - 22577900
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    |||||||||||||||||||  || |||  ||| ||||||||||  |||||| ||||||||| | ||| ||||| |||| ||||||| |||||||||||||    
T  22578100 caatgccttcaaatcctttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttaaacgagattaaatctattgaacaccctttgaagcttt 22578001  T
Q  105 aattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagc 204  Q
    || |||  || ||  |||||| ||||| ||||||||||| || | ||||||||| ||||| |||||| ||||||| | |||||||| |||||||| ||||    
T  22578000 aagtcttgcatctcctgatgaacttcagcttctggtgatcttgcctctgatgagatgcttctgatgaccttgcttctaatgacgtcatcacttcaggagc 22577901  T
Q  205 a 205  Q
    |    
T  22577900 a 22577900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 21283457 - 21283270
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || | | |||| ||| ||||||| |||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  21283457 gcatccaatgccttcaaatcctttcaaaatggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 21283358  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    ||||||| |||  ||  |  |||||| ||||||||||||||||| || ||||||||||| | ||| ||||||||||| || |||||||    
T  21283357 gctttaagtcttgcatatcctgatgaacttcaacttctggtgatcttgcttctgatgagattcttctgatgaacttgattctgatgac 21283270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 249
Target Start/End: Original strand, 13692454 - 13692667
Alignment:
Q  39 cttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttct 137  Q
    ||||||||||| |||||| ||||||||| | ||| ||||| |||  ||||||| ||||||||||||||| |||  || ||| |||||| ||| | |||||    
T  13692454 cttcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttacatcttctgatgagctttagcttct 13692553  T
Q  138 ggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatg 235  Q
    |||||| || ||||||| ||| ||||| |||||||||||||| |||||| ||| |||||||| |||||  |||| |||||| | | ||| |||||||| |    
T  13692554 ggtgatcttgcttctgaagagatgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacg 13692653  T
Q  236 cttcaagcttcctt 249  Q
    | | ||||||||||    
T  13692654 ccttaagcttcctt 13692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 11792981 - 11793233
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||| ||||||| ||||  || ||| |||| |||||||||| | |||||| |||||||| ||||| |||||  ||  ||||||| ||||| ||    
T  11792981 gcatcaaatgctttcaaatgctttcaaaatagtcgttgcttcactcttatggtctttcgcaatgcttagacgagattaagtccattgaacaacctttaaa 11793080  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgc-ttttgatgacgtcgtcact 196  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| |||  ||||||||||| || ||||||||||||||| |||| |||||||| |||||    
T  11793081 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgatgagatgtttatgatgaacttgctttttaatgacgtcatcact 11793180  T
Q  197 tcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | | ||||| |  ||||||| | | ||| | ||||||||||||||||||||||    
T  11793181 ttaggagcactaaacttcaggagcacttcttttcagatgcttcaagcttcctt 11793233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 13880178 - 13880430
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| |||||||| || |||||| ||||||||| ||||| |||||  ||  ||||||||||||||||    
T  13880178 gcatctaatgccttcaaatcctttcaaaatagtcgttgcttcactcgtcgagtcttctgcaatgcttagacgagattaagtccattgaacagcctttgaa 13880277  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||  |||  ||  |  |||||| ||  | |||||  |||| ||   ||||||||||| ||||| |||||||||||||| |||||| ||| ||||||    
T  13880278 gctttatgtcttgcaattcctgatgaactagagcttctcatgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgtcatcactt 13880377  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||||||| | ||| |||||||| |||| ||||||||||    
T  13880378 caggagcactttgacttcagaagcacttctcttcagacgctttaagcttcctt 13880430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 19236957 - 19236845
Alignment:
Q  137 tggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgc 236  Q
    |||||||||| |||||||||||||| || ||| |||||||||| |||||||||| ||||||||  |||| ||||||||| || | || ||||||||||||    
T  19236957 tggtgatgttgcttctgatgaggtggttctgacgaacttgcttctgatgacgtcatcacttcagaagcacttgacttcaaaatcactattcttcagatgc 19236858  T
Q  237 ttcaagcttcctt 249  Q
    |||| ||||||||    
T  19236857 ttcaggcttcctt 19236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21695475 - 21695668
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||||||| ||||| ||||||||| ||||| ||||| |||  ||||||| | ||||||    
T  21695475 gcatccaatgccttcaaatcattttgaaatagtcgttgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaa 21695574  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||||| |||||||||||    |||| |        ||| |||||||||||||| |||||||||| ||||||||    
T  21695575 gctttaagtcttgcatctcttgatgaacttcagcttctggtgat----cttcag--------cttctgatgaacttgcttatgatgacgtcatcacttca 21695662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44467138 - 44467376
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttga 98  Q
    ||||||||||||||||||||||||  || ||| |||| |||||||||||||||||| |||||||| |||||| ||||| |||  ||||||| || |||||    
T  44467138 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaaccttttga 44467237  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||||| |||  || ||  |||||| ||||| ||| ||||||    |||||         |||| |||||||||||||| ||||| |||| |||||||    
T  44467238 agctttaagtcttgcatctcctgatgaacttcagcttttggtga----tcttc--------agcttctgatgaacttgcttctgatggcgtcatcacttc 44467325  T
Q  199 aagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | ||||| |  ||||||| | | ||| |||||||||||||||| |||||||    
T  44467326 aggagcactatacttcaggagcacttctcttcagatgcttcaaacttcctt 44467376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 13260620 - 13260456
Alignment:
Q  87 aacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatga 186  Q
    ||||| ||||| |||||||| |||  || ||  |||||| ||| | ||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||    
T  13260620 aacagtctttggagctttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctaatgagatgcttatgatgaacttgcttctgatga 13260521  T
Q  187 cgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | || |||||||| |||||  ||||||||||  | | ||| |||| | |||||||||||||||||    
T  13260520 catcatcacttcaggagcacttttgacttcatgagcacttctctttaaatgcttcaagcttcctt 13260456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 24788219 - 24788372
Alignment:
Q  5 ccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagctt 103  Q
    ||||||||||||||||||||  || ||  |||| |||||||||||||||||| |||||||| |||| |  |||| |||| ||||||| ||||||||||||    
T  24788219 ccaatgccttcaaatcctttcaaaatattcgttgcttcactcttctagtcttctgcaatgcttagatgatattaaatctattgaacaacctttgaagctt 24788318  T
Q  104 taattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||| |||  || ||  | |||| ||||| ||||||||||| || ||||||||||    
T  24788319 taagtcttgcatctcctaatgaacttcagcttctggtgatcttgcttctgatga 24788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 30026128 - 30026217
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||||||| |||||||| ||||| ||| ||||||||| | ||| ||||||||||||||||||||||||    
T  30026128 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcagaagcacttctcttcagatgcttcaagcttcctt 30026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13730759 - 13730653
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| |||||||| |||  || |||||||| |||||||||| ||||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  13730759 gcatccaatgcattcaaatcttttcaaaatagccgttgcttcactcttttagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaa 13730660  T
Q  100 gctttaa 106  Q
    |||||||    
T  13730659 gctttaa 13730653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29935442 - 29935272
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||||||| ||||| ||||||| ||   ||||||| || | ||||||| ||||||||     
T  29935442 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttctggtcttctgcaatgttaagtgtgattaaatatattgaacaacctttgaaa 29935343  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
     ||||| |||  || ||  |||||| ||| | ||||||||||| || ||||||||||| ||||| ||||||    
T  29935342 ttttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatga 29935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9709886 - 9709781
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  |||||||| |||||||    
T  9709886 gcatctaatgccttcaaatcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaa 9709787  T
Q  100 gcttta 105  Q
    ||||||    
T  9709786 gcttta 9709781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 13648803 - 13648960
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| ||| |||||||||  || |||||||| ||||||||||  |||||| ||||||||| ||||| ||||| |||  ||||||| | ||||||    
T  13648803 gcatccaatgtctttaaatcctttcaaaatagccgttgcttcactctttcagtcttctgcaatgcttagacgcgattaaatccattgaacatcttttgaa 13648902  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||| || ||  |||||| ||| | |||||| |||| || ||||||||||    
T  13648903 gctttaagtctcgcatctcctgatgagctttagcttctgttgatcttgcttctgatga 13648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 14193298 - 14193398
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||||||| || |||||||||||||||||||| |||||||||| |||||||| |||||  |||| |||||| | | ||| |||||||| |||||||||||    
T  14193298 cttctgataagatgcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagacgcttcaagctt 14193397  T
Q  246 c 246  Q
    |    
T  14193398 c 14193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15088594 - 15088699
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || ||| |||| ||||||||||  |||||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  15088594 gcatccaatgtcttcaaatcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 15088693  T
Q  100 gcttta 105  Q
    ||||||    
T  15088694 gcttta 15088699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 28622439 - 28622334
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  ||||||||||| ||||||| ||||||| || |||||||| |||||| ||||  |||  ||||||| | |||||||    
T  28622439 catccaatgccttcaaatcctttcaaattagccgttgcttcacttttctagtattctgcaatgcttagacgagattgaatccattgaacaacttttgaag 28622340  T
Q  101 ctttaa 106  Q
    ||||||    
T  28622339 ctttaa 28622334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 2500261 - 2500351
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||  |||| |||||| | | ||| ||||||||||||||||||||||||    
T  2500261 gcttctgatgaacttgcttatgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagatgcttcaagcttcctt 2500351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13302884 - 13302990
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| |||||||||||||||||| | |||||| ||||||  |||| |||  ||||||| ||||||||    
T  13302884 gcatctaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctacaatgcttagacgatattaaatccattgaacaacctttgaa 13302983  T
Q  100 gctttaa 106  Q
    |||||||    
T  13302984 gctttaa 13302990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13018589 - 13018478
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    ||||||||||||||||| | | ||| || ||| |||| ||||||||| |||||||| |||||| || | |||||||| |||  |||||||||| ||||||    
T  13018589 gcatccaatgccttcaacttcatttaaaatagtcgttgcttcactctcctagtcttctgcaatactgggcgtgattaaatccattgaacagccttttgaa 13018490  T
Q  100 gctttaattctc 111  Q
    ||||||| ||||    
T  13018489 gctttaagtctc 13018478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2500112 - 2500218
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || |||  ||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| | ||||||    
T  2500112 gcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaa 2500211  T
Q  100 gctttaa 106  Q
    |||||||    
T  2500212 gctttaa 2500218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9069636 - 9069742
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || ||| |||| ||||||||||| |||||| |||||||| ||||||  |||| |||  ||||||| ||||||||    
T  9069636 gcatacaatgcctttaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaa 9069735  T
Q  100 gctttaa 106  Q
    |||||||    
T  9069736 gctttaa 9069742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 13137830 - 13137756
Alignment:
Q  176 gcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||| |||||| |||||||| ||||| ||||||||||| | | ||| ||||||||||||||||||||||||    
T  13137830 gcttttgaagacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctt 13137756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 5000790 - 5000687
Alignment:
Q  147 tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    ||||||| |||| ||||| |||  | ||||||| ||||||| ||||||||||| ||||| ||||||||||| | | ||| |||||||||| ||||| |||    
T  5000790 tcttctggtgagatgcttctgacaatcttgcttctgatgacatcgtcacttcaggagcactttgacttcaggatcacttctcttcagatgtttcaaactt 5000691  T
Q  246 cctt 249  Q
    ||||    
T  5000690 cctt 5000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23280042 - 23279900
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||||||| || |||| ||| |||||| | |||||| |||||  ||||| |||   |||| ||||||||||    
T  23280042 gcatccaatgccttcaaatcctttcaaactagccgttgctccacttttccagtcttctacaatgcttagacaagattaaatc-catgaatagcctttgaa 23279944  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| |||  || ||  |||||| || ||||||||||||||    
T  23279943 gctttaagtcttgcatctcctgatgaactacaacttctggtgat 23279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 2913538 - 2913453
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||||||||||||||||||||| | |||||| |||||  |||| |||||| | | ||| |||||| |||||| ||||||||||    
T  2913538 tgatgaacttgcttttgatgacgtcattacttcaggagcacttttgtcttcaggagcacttctcttcatatgctttaagcttcctt 2913453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 9098329 - 9098283
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactctt 48  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  9098329 catctaatgcattcaaatccttttgaattagccgttgcttcactctt 9098283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30944407 - 30944301
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||| ||| | |||| |||||| | |||||| ||||| |||  ||||||| ||||||||    
T  30944407 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttgaacaacctttgaa 30944308  T
Q  100 gctttaa 106  Q
    |||||||    
T  30944307 gctttaa 30944301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21692361 - 21692426
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct 66  Q
    ||||||||||||||||||||||||  ||  || |||| |||||||||||| ||||| |||||||||    
T  21692361 gcatccaatgccttcaaatcctttcaaaacagtcgttgcttcactcttctggtcttctgcaatgct 21692426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33691796 - 33691691
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| || ||||| |||| ||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  || |||||||||||||    
T  33691796 gcatctaacgcctttaaattctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaa 33691697  T
Q  100 gcttta 105  Q
    ||||||    
T  33691696 gcttta 33691691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 41842355 - 41842215
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagc 101  Q
    |||||||| |||||| | | |||||||||| |||| ||||||||| ||  |||| |||| |||| ||||| ||| | |||   |||||| ||||||||||    
T  41842355 atccaatgtcttcaacttcatttgaattagtcgttgcttcactctcctgatcttatgcagtgcttagacgagatcaaatcaaatgaacaacctttgaagc 41842256  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    || || ||||||| ||| |||||| ||||| |||||||||||    
T  41842255 tt-aagtctctcatcttctgatgaacttcagcttctggtgat 41842215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 14426756 - 14426840
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  14426756 tgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctt 14426840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 15088743 - 15088787
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||    
T  15088743 gcttatgatgaacttgcttctgatgacgtcatcacttcaggagca 15088787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 16542952 - 16542869
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||| ||| ||||||||||  ||||||||||||| |||| |||||||| |  ||||||||||| |||| ||||||||||    
T  16542952 tgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagcagttttcttcagacgctt-aagcttcctt 16542869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 16622710 - 16622793
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||| ||| ||||||||||  ||||||||||||| |||| |||||||| |  ||||||||||| |||| ||||||||||    
T  16622710 tgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagcagttttcttcagacgctt-aagcttcctt 16622793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 21381374 - 21381287
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||| ||||||||| |||| |||||||||| ||||||||  |||| |||||||| || | | |||||||||||| |||| ||||||||    
T  21381374 gcttctgatgaactagcttctgatgacgtcatcacttcagaagcactttgactttaggagcacttttcttcagacgctttaagcttcc 21381287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2913692 - 2913586
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| || |||| |||||||||| |||| ||  |||| | ||||| ||   ||||||||||||||||    
T  2913692 gcatccaatgccttcaaatcctttcaaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacagcctttgaa 2913593  T
Q  100 gctttaa 106  Q
    | |||||    
T  2913592 gatttaa 2913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 4494725 - 4494799
Alignment:
Q  175 tgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||| |||||||| ||||| |  ||||||| | | ||| |||| |||||||||||||||||||    
T  4494725 tgcttctgatgacgtcatcacttcaggagcactatacttcaggagcacttctctttagatgcttcaagcttcctt 4494799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 13032019 - 13031921
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    |||||||||||||| || |  ||||||||||| |||||||||| | | | || ||||| |  ||||||| | | |||||||||||| ||||||||||||    
T  13032019 cttctgatgaggtgtttctagtgaacttgcttctgatgacgtcattaatccaggagcactaaacttcaggagcacttttcttcagacgcttcaagcttc 13031921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13137979 - 13137873
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||||||||| |||  || |||  ||| ||||||||||  |||||| |||||||| |||||| ||||| |||  ||||  | ||||||||    
T  13137979 gcatccaatgccttcaaatcttttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgattaacctttgaa 13137880  T
Q  100 gctttaa 106  Q
    |||||||    
T  13137879 gctttaa 13137873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 13893933 - 13893895
Alignment:
Q  133 cttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  13893933 cttctggtgatgttgcttctgatgaggtgcttttgatga 13893895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14426621 - 14426683
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||    
T  14426621 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 14426683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30945440 - 30945334
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||| ||| | |||| | |||| | |||||| ||||| |||  ||||||| ||||||||    
T  30945440 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatcttctacaatacttagacgagattaaatccgttgaacaacctttgaa 30945341  T
Q  100 gctttaa 106  Q
    |||||||    
T  30945340 gctttaa 30945334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 4821708 - 4821753
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||| |||||||||||||||||| |||||||| |||||    
T  4821708 tgcttctgatgaccttgcttttgatgacgtcatcacttcaggagca 4821753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 12174263 - 12174218
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  12174263 tgcttctgatgaactcgcttttgatgacgtcatcacttcaggagca 12174218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 13303062 - 13303119
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||| ||||| ||||||| |||||| | |||||||| |||||||| |||||    
T  13303062 cttctgatgagatgcttctgatgaagttgcttctaatgacgtcatcacttcaggagca 13303119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 30945310 - 30945221
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  ||||||||||| | || ||||||||||    
T  30945310 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgttttaagcttcctt 30945221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14193188 - 14193244
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttt 57  Q
    |||| |||||||||||||||||||  || ||| |||| ||||||||||| |||||||    
T  14193188 gcattcaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttt 14193244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 36217 - 35992
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||| ||| || |||||| |||  ||| ||||| ||||| |||||| ||||||| |||||||||||| |||  ||||||| |||||||||    
T  36217 gcatccaatgcctttaaaaccatttgaaatagttgttgcttcattcttccagtcttctgcaatgatagacgtgattaaatcaattgaacaacctttgaag 36118  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    ||| |||| |||||| || |||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  36117 cttcaattttctcagattctgatgatcttcagcttatggtgatgttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaa 36018  T
Q  201 gagcatttgacttcagaacctctttt 226  Q
    |||||||||||||||||| |||||||    
T  36017 gagcatttgacttcagaagctctttt 35992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 25559 - 25501
Alignment:
Q  148 cttctgatgaggt-gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||||||| || |||| |||||||||||||| |||||||||| |||||||| |||||    
T  25559 cttctgatgaagttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 25501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 34699 - 34655
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  34699 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 34655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 19707581 - 19707824
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagcttta 105  Q
    |||||||||||||| | ||||||||||||||| |||||||||||| ||||| ||||||| |||   ||||||  || |||||||||||||||||||||||    
T  19707581 caatgccttcaaattcatttgaattagccgttgcttcactcttctggtcttctgcaatgttaggaatgattaagtcctttgaacagcctttgaagcttta 19707680  T
Q  106 attctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| ||| ||| |||||||||||| ||||||| ||| || ||||| ||||||||||| | |||||||||||| |||||| ||| |||||||| |||||    
T  19707681 attctttcatcttctgatgatcttcagcttctggcgatcttgcttctaatgaggtgcttctaatgaacttgcttctgatgatgtcatcacttcaggagca 19707780  T
Q  206 tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     || ||||||| | | ||||||||||||| ||||||||||||||    
T  19707781 cttaacttcaggagcacttttcttcagattcttcaagcttcctt 19707824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 20382463 - 20382225
Alignment:
Q  13 ttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagctttaattctc 111  Q
    ||||||||||||   | |||||||| |||||||| |||||||||||||||||| | |||| ||||  |||  |||||||||||||||||||||||  ||     
T  20382463 ttcaaatcctttcagaatagccgttgcttcactcctctagtcttttgcaatgcatggacgagattgaatccattgaacagcctttgaagctttaagactt 20382364  T
Q  112 tcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttga 210  Q
     || ||  |||||| ||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  20382363 gcatctcctgatgaacttcagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcactttga 20382264  T
Q  211 cttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||| | | ||| |||||||| |||||||||||||||    
T  20382263 cttcaggagcacttctcttcagacgcttcaagcttcctt 20382225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33082927 - 33083175
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||||||||  |||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  33082927 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctgatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 33083026  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| || ||||||||||| |||||  |||||||||| || | |||||||| ||||||||    
T  33083027 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatgagttgcttcagatgaacttgtttctaatgacgtcatcacttca 33083126  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||||||  ||||||||||  | | ||| |||||||| |||| |||||||    
T  33083127 agagcacttttgacttcaagagcacttctcttcagacgctttaagcttc 33083175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16681384 - 16681136
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || ||| |||| ||||||||||| |||||| ||||||||| ||||| ||||| |||  ||||||||||||||||    
T  16681384 gcatctaatgccttcaaatcctttcaaactagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 16681285  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||| ||| |||  || ||  |||||| ||| | ||||| ||||| || ||| ||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  16681284 gctctaagtcttgcatctcctgatgaactttagcttctagtgatcttgcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttca 16681185  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
     |||||  |||| |||||| | | ||| |||||||| |||| |||||||    
T  16681184 tgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttc 16681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 19156266 - 19156504
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  19156266 gcatccaatgccttcaaatcctttcaaattagtcgttgcttcactcttctagtcttctgcaatgcatagacgagattaaatccattgaacagcctttgaa 19156365  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    |||||||||||  || ||  |||||| || |||||||||||||    |||||         |||| |||||||||||||| |||||| ||| ||||||||    
T  19156366 gctttaattcttgcatctcttgatgaactacaacttctggtga----tcttc--------agcttctgatgaacttgcttctgatgatgtcatcacttca 19156453  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||||||||||| | | ||| |||||||| |||| ||||||||||    
T  19156454 ggagcactttgacttcaggagcacttctcttcagacgctttaagcttcctt 19156504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19943306 - 19943555
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagccttt-ga 98  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||| |||||| ||||||||| ||||| ||||| |||  ||||| ||||||| ||    
T  19943306 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaatagccttttga 19943405  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    |||||||| |||  || ||  |||||| ||||| ||||| ||||| |||  ||||||||||| ||||| ||||||||||||||  |||| |||| |||||    
T  19943406 agctttaagtcttgcatctcctgatgaacttcagcttctagtgatctttagcttctgatgagatgcttctgatgaacttgcttccgatgtcgtcatcact 19943505  T
Q  197 tcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||| ||||| |  ||||||| | | ||| |||||||||||||||||||||    
T  19943506 tcaggagcactatacttcaggagcacttctcttcagatgcttcaagcttc 19943555  T

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Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43644966 - 43645079
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| ||| |||||||| |||||||||    
T  43644966 gcatccaatgccttcaaattcatttgaattagccgtttcttcactcttctggtcttctgcaatgctaggcgtgattaaatcatttgaacaacctttgaag 43645065  T
Q  101 ctttaattctctca 114  Q
    |||| |||||||||    
T  43645066 ctttgattctctca 43645079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 39693605 - 39693854
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| | || ||||||||||| |||||| |||||||| |||||| ||||  |||  ||||||| ||||||||    
T  39693605 gcatccaatgctttcaaatcctttcaaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaa 39693704  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| || |||||||||||||| ||   ||||||||||  ||||| ||||||||||| || |||||||||| ||||||    
T  39693705 gctttaagtcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgatgacatgcttttgatgaacttgtttctgatgacgtcatcactt 39693804  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    || | ||| ||||||||||||| | ||| ||||| ||||||| |||||||    
T  39693805 caggtgcactttgacttcagaagcacttctcttcggatgctttaagcttc 39693854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 17914529 - 17914781
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  || |||  ||| ||||||||||  |||||| ||||||||| ||||| ||||| |||  ||||||| | ||||||    
T  17914529 gcatctaatgccttcaaatcctttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaa 17914628  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  | |||| || |||||||| ||||| ||   ||||||||||| ||||| |||||||||||||| | |||||||| | ||||    
T  17914629 gctttaactcttgcaactcctaatgagctacaacttctagtgatcttcagcttctgatgagatgcttctgatgaacttgcttctaatgacgtcattactt 17914728  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||| |||||||| || | | ||| ||||||||||||||||||||||||    
T  17914729 caagagcactttgactttaggagcacttctcttcagatgcttcaagcttcctt 17914781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 17267544 - 17267793
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||| ||||||||||||  || |||| ||| |||||||| |   ||||||||||||||| | ||| |||| || |  ||||||| ||||||||    
T  17267544 gcatctaatgctttcaaatcctttcaaaatagctgttgcttcactcctgcggtcttttgcaatgcttggacgagatt-gaaccattgaacaacctttgaa 17267642  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||||||||| | || ||||| ||||||||    
T  17267643 gctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttgcttctgatgagatgcttttgatgaacttgcttctaataacgtcatcacttca 17267742  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
      |||| |||||||||||   | ||| ||||||||||||||||||||||||    
T  17267743 gaagcactttgacttcaggcacacttctcttcagatgcttcaagcttcctt 17267793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 19956420 - 19956180
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagat-cttttgaacagcctttgaagc 101  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||  |||| | |||| |||| || | ||| || |||||||||||  ||||||||    
T  19956420 atccaatgccttcaaatcctttagaattagtcgttgcttcactcttctgatcttctacaatactaggcgaggttaaatccttttgaacagtatttgaagc 19956321  T
Q  102 tttaattc-tctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgag---gtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||||||| ||||||||| ||||||||||||      ||||      |||||||| ||   ||||||||| |||  |||||| |||||||||| ||||||    
T  19956320 tttaattcttctcagcttctgatgatcttca------ggtg------cttctgataagaatgtgcttatggtgattttgcttctgatgacgtcatcactt 19956233  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    || ||||| ||| ||||||||| |||||| |||||| |||||||| |||||||    
T  19956232 caggagcacttgtcttcagaacatctttttttcagacgcttcaagtttccttc 19956180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 23263692 - 23263488
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| | ||  ||||||||||||||||| |||| || | ||||| ||||| |||| ||||||| |||||||||    
T  23263692 catccaatgccttcaaatcctttcaaaatagtcattgtttcactcttctagtcttctgcattgtttagacgagattaaatctattgaacaacctttgaag 23263593  T
Q  101 ct-ttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
     | |||| | |  || ||  |||||| ||||| |||||| |||| || ||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  23263592 ttcttaagttttgcatctcctgatgaacttcagcttctgatgatcttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttca 23263493  T
Q  200 agagc 204  Q
     ||||    
T  23263492 ggagc 23263488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 24646408 - 24646659
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||| ||||||||||  || |||| ||| || ||||||| ||||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  24646408 gcatccaatgcctgcaaatcctttcaaaatagctgttgctacactcttttagtcttatgcaatgcttagacgagattaaatcaattgaacaacctttgaa 24646507  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||| ||   |||||||| || ||||| |||||||||||||| |||||||||| ||||||    
T  24646508 gctttaactcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgataagatgcttctgatgaacttgcttctgatgacgtcatcactt 24646607  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||  |||| |  ||||||| | | ||| |||  |||||||||||||||||||    
T  24646608 cagaagcactatacttcaggagcacttctctctagatgcttcaagcttcctt 24646659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 17701815 - 17701996
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||||  |||| ||||||||| ||||| ||||| ||   ||||||| ||||||||    
T  17701815 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttctgatcttctgcaatgcttagacgagattaaattcattgaacaacctttgaa 17701914  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat--gtttcttctgatgaggtgcttatgatgaacttgctt 179  Q
    ||||||| ||||||| ||| |||||| ||||| |||||||||||    | ||||||| ||||||||| ||||||||||||||    
T  17701915 gctttaagtctctcatcttctgatgaacttcagcttctggtgatcatctgcttctgaagaggtgcttctgatgaacttgctt 17701996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18731072 - 18730810
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtctt-ttgcaatgctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||| ||||  || ||| |||| |||||||||||| ||||| |||||||||||| |||||||| ||| ||||||||| |||||||    
T  18731072 gcatctaatgccttcaaattctttcaaaatagtcgttgcttcactcttcttgtcttcttgcaatgctagccgtgattaaatcctttgaacagtctttgaa 18730973  T
Q  100 gctttaattctctcagcttatgatgatctt-----------------caacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttg 182  Q
    || |||| ||| ||| ||| ||||||||||                 || ||||||| |||||  |||||||||| |||||| |||| ||||||||| ||    
T  18730972 gcattaactctttcatcttctgatgatcttctgctcctgatgaaagacagcttctggggatgtagcttctgatgaagtgcttctgatcaacttgcttctg 18730873  T
Q  183 atgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||||||| ||| |||| ||| | ||||||||| || | |||||||||| | |||||||||||    
T  18730872 atgacgtcatcatttcatgagaacttgacttcataatcacttttcttcatacgcttcaagctt 18730810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22461719 - 22461589
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||| ||||||| ||  |  ||||| ||| || ||||| |||||||||    
T  22461719 gcatccaatgccttcaaatccatttgaattagtcgttgcttcattcttctagtcttctgcaatgatatgctagattaaatccttcgaacaacctttgaag 22461620  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    ||| |||||  ||||||| ||||||||||||    
T  22461619 cttaaattcgttcagcttctgatgatcttca 22461589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 20255646 - 20255397
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| || ||||| |||||| ||||| |||  |||||||||||||||     
T  20255646 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaatgcttagacgagattaaatccattgaacagcctttgac 20255547  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||    || | | |||| ||| | ||||||||||| ||   ||||||||||| | ||| |||||||||| ||| |||||||||| ||||||    
T  20255546 gctttaagtct---tgcatctaatgagctttatcttctggtgatcttcagcttctgatgagatacttctgatgaacttccttatgatgacgtcatcactt 20255450  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||||| | |  || |||||||| |||| || |||||||    
T  20255449 caggagcactttgacttcaggagcagttctcttcagacgctttaaacttcctt 20255397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18722727 - 18722597
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtctt-ttgcaatgctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||| ||||  || ||| |||| |||||||||||| ||||| |||||||||||| |||||||| ||| ||||||||| |||||||    
T  18722727 gcatctaatgccttcaaattctttcaaaatagtcgttgcttcactcttcttgtcttcttgcaatgctagccgtgattaaatcctttgaacagtctttgaa 18722628  T
Q  100 gctttaattctctcagcttatgatgatcttc 130  Q
    || |||| ||| ||| ||| |||||||||||    
T  18722627 gcattaactctttcatcttctgatgatcttc 18722597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 18121190 - 18121018
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||| |||||||||  || |||| ||| |||||||||||||||||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  18121190 gcatccaatgcctttaaatcctttcaaaatagcagttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 18121091  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatg 170  Q
     |||||| |||  || ||  |||||| ||  | ||||||||||| |||  ||||||||||| ||||| |||||    
T  18121090 actttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgatg 18121018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18685478 - 18685348
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtctt-ttgcaatgctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||| ||||  || |||  ||| |||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||||    
T  18685478 gcatctaatgccttcaaattctttcaaaatagttgttgcttcactcttctggtcttcttgcaatgctagacgtgattatatcctttgaacagtctttgaa 18685379  T
Q  100 gctttaattctctcagcttatgatgatcttc 130  Q
    || |||| ||| | | ||| |||||||||||    
T  18685378 gcattaactcttttatcttctgatgatcttc 18685348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 16189054 - 16189250
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat-gctagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||||||||| |||  || ||| |||| ||||||||||| |||||| |||||| | | |||| ||||| |||  || |||| ||||||||    
T  16189054 gcatccaatgccttcaaatcatttcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaacaacctttgaa 16189153  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    ||||||| |||  || ||  | |||| ||||  ||||||||||| || ||||| ||||| | ||| |||||||||||||| |||||| ||| |||||    
T  16189154 gctttaagtcttgcatctcctaatgaacttcggcttctggtgatcttgcttctaatgagatacttctgatgaacttgcttctgatgatgtcatcact 16189250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 16207376 - 16207557
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||| ||||||| |||||| |||||||| |||||| ||||| |||  ||||||||| ||||||    
T  16207376 gcatccaatgccttcaaatcctttcaaaatagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcgtttgaa 16207475  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgctt 179  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||| |||  ||||| ||||| ||||| |||| |||||||||    
T  16207476 gctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctaatgagatgcttctgataaacttgctt 16207557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18321240 - 18321067
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||| |||||||||||  || |||| ||| |||||||||| | ||||  ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  18321240 gcatccaatgccctcaaatcctttgaaaatagctgttgcttcactcttttggtctcatgcaatgcttagacgagattaaatccattgaacaacctttgaa 18321141  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatga 171  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| |  | ||||||||||| ||||| ||||||    
T  18321140 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgatgagatgcttctgatga 18321067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23185307 - 23185202
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  23185307 gcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 23185208  T
Q  100 gcttta 105  Q
    ||||||    
T  23185207 gcttta 23185202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 29693385 - 29693639
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||| ||||||||||||  || |||  ||| ||||||||||  |||||| ||||||||| ||||| ||||| ||   || ||||| ||||| |    
T  29693385 gcatacaatgctttcaaatcctttcaaaatagtggttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattaaacagtctttgga 29693484  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  | |||| || |||||| ||||||| ||   ||| ||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  29693485 gctttaagtcttgcatctcctaatgaactacaacttatggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 29693584  T
Q  198 caagagca---tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||   |||| |||||  | | ||| ||||||||||||| ||||||||||    
T  29693585 caggagcactttttgtcttcaagagcacttctcttcagatgctttaagcttcctt 29693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30421509 - 30421404
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||| ||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||||||||||||||    
T  30421509 gcatccaatgccttcaaatccattcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 30421410  T
Q  100 gcttta 105  Q
    ||||||    
T  30421409 gcttta 30421404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17525810 - 17525562
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagccttt-ga 98  Q
    ||||||||||| ||||||||||||  || |||  |||  |||||||||| |||||| |||| |||| |||||  |||| |||  ||||||| ||||| ||    
T  17525810 gcatccaatgctttcaaatcctttcaaaatagttgttgtttcactcttccagtcttctgcagtgcttagacgatattaaatccattgaacaaccttttga 17525711  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtc-gtcactt 197  Q
    || ||||| |||  || ||  |||||| || ||  |||||||||| || ||||||||||| ||||| ||| |||||||||| |||||| |||  ||||||    
T  17525710 agatttaagtcttgcatctcctgatgaactacagtttctggtgatcttgcttctgatgagatgcttctgacgaacttgcttctgatgatgtcaatcactt 17525611  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    || ||||| ||| |||||| | | ||| | |||||||||||||| ||||    
T  17525610 caggagcacttgtcttcaggagcacttcttttcagatgcttcaatcttc 17525562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 22745595 - 22745764
Alignment:
Q  39 cttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttct 137  Q
    |||||| |||| |||||| | ||||||| ||||| ||||| |||  ||||||| ||||||||||||||| |||  || ||  |||||| ||  | |||||    
T  22745595 cttcacacttccagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttct 22745694  T
Q  138 ggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||| ||   ||||||||||| ||||| |||||||||||||| ||| |||||| |||||||| |||||    
T  22745695 ggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgacgacgtcatcacttcatgagca 22745764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 18680031 - 18680120
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||||||| |||||||||| |||||||| ||||| ||||||||||| | | | | ||||||||||||| ||||||||||    
T  18680031 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcaggagcac-tctcttcagatgcttaaagcttcctt 18680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21932953 - 21933059
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || ||||||||  |||||||||  |||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  21932953 gcatacaatgcctttaaatcctttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaa 21933052  T
Q  100 gctttaa 106  Q
    |||||||    
T  21933053 gctttaa 21933059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18719071 - 18719228
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| |||||||||| |  || ||| |||| |||||||| ||| ||||||||||||||| | ||| ||||  |||   |||||||||||||||    
T  18719071 gcatccaatgctttcaaatcctatcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttgaacgagattgaatccactgaacagcctttgaa 18719170  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||| ||| |||  || ||| ||| || ||| | ||||||||||| || ||||||||||    
T  18719171 gctctaagtcttgcatcttctgaagaacttaagcttctggtgatcttgcttctgatga 18719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 602652 - 602564
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||||||| |||||||| ||||| | |||||||| | | ||| |||| ||| ||||||| |||||||    
T  602652 gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcactagacttcagcaacgcttctctttagacgcttcaaacttcctt 602564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 17702000 - 17702048
Alignment:
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  17702000 gagcatttgacttcagaagcacttctcttcagatgcttcaagcttcctt 17702048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 18722577 - 18722465
Alignment:
Q  133 cttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcag 232  Q
    ||||||| |||||  |||||||||| |||||| |||| ||||||||| | |||||||  ||| |||| ||| | ||||||||| || | ||||||||||     
T  18722577 cttctggggatgtagcttctgatgaagtgcttctgatcaacttgcttctaatgacgtgatcatttcatgagaacttgacttcataatcacttttcttcat 18722478  T
Q  233 atgcttcaagctt 245  Q
    | |||||||||||    
T  18722477 acgcttcaagctt 18722465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12757844 - 12757738
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||  |||||| |||||||| |||||| ||||| |||  ||||||| ||||| ||    
T  12757844 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacatcctttaaa 12757745  T
Q  100 gctttaa 106  Q
    | |||||    
T  12757744 gttttaa 12757738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 6407938 - 6407977
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  6407938 tgatgaacttgcttttgatgacgtcatcacttcaggagca 6407977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 17441727 - 17441652
Alignment:
Q  175 tgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||| |||||||| ||||| ||||||||||| | | ||| |||||||| |||| ||||||||||    
T  17441727 tgcttctgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagacgctttaagcttcctt 17441652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 18685324 - 18685245
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    |||| ||||||||| |||||||||| ||| |||| ||| | ||||||||| || | |||||||||| | |||||||||||    
T  18685324 tgatcaacttgcttctgatgacgtcatcatttcatgagaacttgacttcataatcacttttcttcatacgcttcaagctt 18685245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 602801 - 602695
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| | || ||||||||||| |||||| |||||||| |||||| ||||  |||   |||||| ||||||||    
T  602801 gcatccaatgctttcaaatcctttcaaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaacctttgaa 602702  T
Q  100 gctttaa 106  Q
    | |||||    
T  602701 gttttaa 602695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 18772912 - 18772950
Alignment:
Q  211 cttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  18772912 cttcagaacctcttttcttcaaatgcttcaagtttcctt 18772950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 22674009 - 22674054
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  22674009 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 22674054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 43640005 - 43640050
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  43640005 tgcttctgatgaacttgcttctgatgacgtcatcacttcatgagca 43640050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 18151599 - 18151555
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  18151599 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 18151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 24551521 - 24551565
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||||||||||| |||| |||||||||| |||||||| |||||    
T  24551521 gcttatgatgaactcgcttctgatgacgtcatcacttcaggagca 24551565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 43645086 - 43645150
Alignment:
Q  182 gatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||||||||| |||||||| ||||| |  ||||||| | | || ||||||||||||||||||||||    
T  43645086 gatgacgtcatcacttcaggagcactaaacttcaggagcgctattcttcagatgcttcaagcttc 43645150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17024967 - 17024732
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||| ||  |||||||| ||| ||||||||| | ||||||    
T  17024967 gcatccaatgccttcaaatccttttgaattagtcgttgcttcactcttatggtcttttgcaatgttatgcgtgattaaatcctttgaacagacattgaag 17024868  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||||||||||||||||| |||||||||||| |||||||||||||              ||||| |||||||||||||| |||||||||  ||||||||     
T  17024867 ctttaattctctcagcttctgatgatcttcagcttctggtgatgt--------------tgcttctgatgaacttgcttctgatgacgttatcacttcag 17024782  T
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
     |||| || |||| ||||||||||||||||||||||||||||||||||||    
T  17024781 aagcacttaactttagaacctcttttcttcagatgcttcaagcttccttc 17024732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 249
Target Start/End: Complemental strand, 12613813 - 12613547
Alignment:
Q  5 ccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| |||||||||||| |||||||||||||    
T  12613813 ccaatgctttcaaatc-ttttgaattagccgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatcttttgaacaacctttgaagcttt 12613715  T
Q  105 aattctc------tcagcttatgatgatcttcaacttc-----------------tggtgatgtttcttctgatgaggtgcttatgatgaacttgctttt 181  Q
    || ||||      ||||||  |||||||||||| ||||                 |||||||||| |||||||||||||| || | |||||||||||| |    
T  12613714 aaatctctcatcttcagctcgtgatgatcttcagcttctgatgaaagaacgcttttggtgatgttgcttctgatgaggtggttctaatgaacttgcttct 12613615  T
Q  182 gatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||||| |||||||| ||||| |||||||||||| | || |||||||||||||||||||||||||    
T  12613614 gatgacgtcatcacttcaggagcacttgacttcagaatcactattcttcagatgcttcaagcttcctt 12613547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21191868 - 21191630
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||| | |  ||||||| ||  |||||||| |||||||||    
T  21191868 gcatccaatgccttcaaatccttttgaattagctgttgcttcactcttctggtcttctgcaatgttgggtgtgattaaatactttgaacaacctttgaag 21191769  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||||| | |||           || ||||| ||||| ||||| ||  |||||||||| |||||  ||||||||||||| |||||||||| ||||||||     
T  21191768 ctttaaatgtct-----------gaacttcagcttcttgtgatattgtttctgatgagatgcttcagatgaacttgcttctgatgacgtcatcacttcag 21191680  T
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||| | |||||||||| | | |||||||||||||||||||||||||||||    
T  21191679 gaggacttgacttcaggagcacttttcttcagatgcttcaagcttccttc 21191630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33256354 - 33256149
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  33256354 gcatccaatgccttcaaatccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 33256255  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  || ||| ||| | ||||||||||| || ||||||||||| ||||| |||||||||||||| |||| | ||| ||||||||    
T  33256254 gctttaagtcttgcatctcctgttgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttca 33256155  T
Q  200 agagca 205  Q
     |||||    
T  33256154 ggagca 33256149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33276526 - 33276321
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  33276526 gcatccaatgccttcaaatccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 33276427  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  || ||| ||| | ||||||||||| || ||||||||||| ||||| |||||||||||||| |||| | ||| ||||||||    
T  33276426 gctttaagtcttgcatctcctggtgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttca 33276327  T
Q  200 agagca 205  Q
     |||||    
T  33276326 ggagca 33276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 22600185 - 22599932
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| ||||  || ||||||| |||||| ||||||||| ||||  ||||| |||  ||||||||||||||||    
T  22600185 gcatccaatgccttcaaatcctttcaaaatagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattgaacagcctttgaa 22600086  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||| |||  ||||||||||| ||||| |||| ||||||||| |||||| ||| ||||||    
T  22600085 gctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgataaacttgcttctgatgatgtcatcactt 22599986  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||  |||| |||||| | | ||| ||||||||||||||||||||||||    
T  22599985 caggagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcctt 22599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19717601 - 19717806
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgcta-gacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||| |||||||||||||||||  || ||| |||| ||||||||||| |||| | |||||||||  |||| ||||| |||  ||||||| ||||||||    
T  19717601 gcatccgatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcctctgcaatgcttcgacgagattaaatccattgaacaacctttgaa 19717700  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||    |||| ||| | ||||||||||| || ||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  19717701 gctttaagtcttgcatctccatatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttatgatgacgtcatcacttca 19717800  T
Q  200 agagca 205  Q
     |||||    
T  19717801 ggagca 19717806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 22153935 - 22154133
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  ||||||  ||| ||||||| |||||||||| |||||||| |||||| ||||| |||  |||||||||||||||||    
T  22153935 catccaatgctttcaaatcctttcaaattagttgttgcttcactattctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaag 22154034  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||||| |||  || ||  |||||| ||||| ||||||||||| |  | ||||| ||||| ||||| | | |||||||||| | |||||||| ||||||    
T  22154035 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttcttatgagatgcttctaaggaacttgcttctaatgacgtcatcactt 22154133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29215874 - 29215980
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||||||| ||||||| ||||||||||||||||||| |||||| ||||| |||  || |||| ||||||||    
T  29215874 gcatccaatgccttcaaatcctttcaaactagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaaacaacctttgaa 29215973  T
Q  100 gctttaa 106  Q
    |||||||    
T  29215974 gctttaa 29215980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 35401886 - 35402137
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| || | || | | ||| ||||| |||  |||||||| |||||||    
T  35401886 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtattgtttaaacgagattaaatccattgaacagtctttgaa 35401985  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||| ||||||    || ||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||| ||| ||||||    
T  35401986 gctttaagtcttgcatcttctgatgaga--cagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgaggtcatcactt 35402083  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||  | || |||||| | | ||| |||||| |||||||||||||||||    
T  35402084 caggagcacttgtgtcttcaggagcgcttctcttcatatgcttcaagcttcctt 35402137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21028870 - 21029107
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||| | | |||||||||| |||| |||||||||| | ||||| ||||||||| | | | ||||| ||   ||||||| | | ||||    
T  21028870 gcatccaatgccttcaacttcatttgaattagtcgttgcttcactcttatggtcttctgcaatgcttggatgagattaaattcattgaacaacatatgaa 21028969  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||||||  || | ||||| |||| |||||||||||    |||| |        ||| ||||||||||||||||||||||||| ||||||||    
T  21028970 gctttaagtctctcatattctaatgatattcagcttctggtgat----cttcag--------cttctgatgaacttgcttttgatgacgtcatcacttca 21029057  T
Q  200 agagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||||||| || | | |||||||||| |||||| ||||||||||    
T  21029058 ggagcacttgacttgaggagcacttttcttcatatgctttaagcttcctt 21029107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 48704281 - 48704468
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||| ||||||||||||||||  || |||  |||  |||||||||| |||||| |||| |||| | ||| ||||| |||  ||||||| ||||||||    
T  48704281 gcatccagtgccttcaaatcctttcaaaatagttgttgtttcactcttccagtcttctgcattgcttaaacgagattaaatccattgaacaacctttgaa 48704380  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    ||||||| |||  || ||| |||||| ||| | ||||||||||| |  ||||||||||| ||||| ||||||||| |||| |||||||    
T  48704381 gctttaagtcttgcatcttctgatgaactttagcttctggtgatctagcttctgatgagatgcttctgatgaactagcttctgatgac 48704468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 12284500 - 12284657
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||| ||| |||||||||||||| | |||| ||||  |||  ||||||| ||||||||    
T  12284500 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaa 12284599  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||| ||| |||  || ||| |||||| ||||| ||||||||||| || ||||||||||    
T  12284600 gctctaagtcttgcatcttctgatgaacttcagcttctggtgatcttgcttctgatga 12284657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 20954473 - 20954269
Alignment:
Q  4 tccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagct 102  Q
    |||||||| ||||||||||||  || | ||| || |||||||||||  ||||| |||||||| |||||| ||||| |||  ||||||| |||||||||||    
T  20954473 tccaatgctttcaaatcctttcaaaatggccattgcttcactcttcctgtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagct 20954374  T
Q  103 ttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||| |||  || ||  |||||| ||  | ||||||||||| ||   ||||||||||| ||||| |||||||||||  | |||||||||| ||||||||     
T  20954373 ttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgaatctgatgacgtcatcacttcag 20954274  T
Q  201 gagca 205  Q
    |||||    
T  20954273 gagca 20954269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22427360 - 22427255
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||| |||||||| |||||||    
T  22427360 gcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacagtctttgaa 22427261  T
Q  100 gcttta 105  Q
    ||||||    
T  22427260 gcttta 22427255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 18896600 - 18896453
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgatt-agatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||| ||||||||||||||||| ||||   ||||||||||| ||||||| ||| ||||||| | ||| ||| |||| | ||||||    
T  18896600 gcatccaatgccttcaaattcttttgaattagccgttgcttcttgcttctagtcttctgcaatgataggcgtgattaacatcatttaaacatcttttgaa 18896501  T
Q  100 gctttaattctctcagcttatgatgatcttc--aacttctggtgatgt 145  Q
     ||| ||| || ||||||| ||| |||||||  |||||||| ||||||    
T  18896500 acttcaatcctttcagcttctgaagatcttcagaacttctgatgatgt 18896453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 2268671 - 2268857
Alignment:
Q  66 tagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgat-gtttcttctgatgaggtgctt 164  Q
    |||||| ||||| |||  ||||||| |||||||||| |||| |||  || ||  | |||| ||| | ||||| ||||| ||| ||||||||||| |||||    
T  2268671 tagacgagattaaatccattgaacaacctttgaagccttaagtcttgcatctcctaatgaactttagcttctagtgattgttgcttctgatgagatgctt 2268770  T
Q  165 atgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     |||||||||||||| |||||||||| |||||||| |||||  |||| |||||| | | ||| |||||||||||| ||| |||||||    
T  2268771 ctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagatgctacaaacttcctt 2268857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28492407 - 28492301
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| |||||||||||||||||| |||||||| ||||||  |||| |||  ||||||| ||||||||    
T  28492407 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgatattaaatccattgaacaacctttgaa 28492308  T
Q  100 gctttaa 106  Q
    |||||||    
T  28492307 gctttaa 28492301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 38282643 - 38282850
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || || ||||| ||||||||||| |||||| ||| |||| |||||| ||||| |||  ||||||| ||||||||    
T  38282643 gcattcaatgcctttaaatcctttcaaaatacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattgaacaacctttgaa 38282742  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||  | ||| ||||||| |||  | ||||||||| ||||| |||| ||||||||| |||||| ||| | ||||    
T  38282743 gctttaagtcttgcatctcctgatgaactagagcttttggtgatctttagcatctgatgagatgcttctgataaacttgcttctgatgaggtcattactt 38282842  T
Q  198 caagagca 205  Q
    || |||||    
T  38282843 caggagca 38282850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32785940 - 32785798
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||   |||||| ||||||||    
T  32785940 gcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatc-catgaacaacctttgaa 32785842  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||||| |||  || || ||||||| || |||||||| |||||    
T  32785841 gctttaagtcttgcatctcatgatgaactacaacttctagtgat 32785798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1577944 - 1578046
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||| ||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||| ||||||| ||||||||    
T  1577944 gcatccaatgctttcaaattctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaa 1578043  T
Q  100 gct 102  Q
    |||    
T  1578044 gct 1578046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 12284678 - 12284768
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||||||| |||||||||| ||||||||  |||| ||||||||||| | | ||| |||||||||| |||||||||||||    
T  12284678 tgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgacttcaggagcacttctcttcagatgtttcaagcttcctt 12284768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 26701978 - 26701897
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||||||||||||| |||||| ||| |||||||| ||||| |||||||||| | | |||||||||| | |||||||||||||    
T  26701978 tgatgaacttgcttctgatgatgtcatcacttcatgagcacttgacttcaggagcacttttcttcatacgcttcaagcttcc 26701897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 23036530 - 23036279
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || |||  |||  |||||| || ||||||| |||| |  | ||||| ||||| |||  ||||| ||||||||||    
T  23036530 gcatccaatgtcttcaaatcctttcaaaatagttgttgtttcacttttttagtcttctgcattatttagacgagattaaatccattgaatagcctttgaa 23036431  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||| ||||||    || ||||||||||| ||   ||||||||||| ||||| ||||||| |||||| |||||| ||| ||||||    
T  23036430 gctttaagtcttgcatcttctgatgaga--cagcttctggtgatcttcagcttctgatgagatgcttctgatgaaattgcttctgatgatgtcatcactt 23036333  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||  | || |||||| | | ||| | ||||||||||||||||||||||    
T  23036332 caggagcacttgtgtcttcaggagcgcttctattcagatgcttcaagcttcctt 23036279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1900422 - 1900528
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| ||||||||| |||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||| | ||||||||    
T  1900422 gcattcaatgcctttaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttgaa 1900521  T
Q  100 gctttaa 106  Q
    |||||||    
T  1900522 gctttaa 1900528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39200995 - 39200890
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || |||||||| ||||||||||  |||||| |||||||| || | | ||||| |||  ||||||||| ||||||    
T  39200995 gcatccaatgtcttcaaatcctttcaaactagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattgaacagcttttgaa 39200896  T
Q  100 gcttta 105  Q
    ||||||    
T  39200895 gcttta 39200890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 2267167 - 2267271
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||| ||||  || |||  ||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||||| |||||||||    
T  2267167 catccaatgccttcaaattctttcaaactagttgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaag 2267266  T
Q  101 cttta 105  Q
    |||||    
T  2267267 cttta 2267271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 18896377 - 18896338
Alignment:
Q  211 cttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18896377 cttcagaacctcttttcttcagatgcttcatgcttccttc 18896338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22464812 - 22464706
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttga 98  Q
    |||||||||||||||||||| |||  |||||| |||| ||||||| ||| |||||| |||||||| |||| | ||||| |||  ||||||| || |||||    
T  22464812 gcatccaatgccttcaaatcatttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttga 22464713  T
Q  99 agcttta 105  Q
    |||||||    
T  22464712 agcttta 22464706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 10251221 - 10251262
Alignment:
Q  167 gatgaacttgcttttgatgacgtcgtcacttcaagagcattt 208  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  10251221 gatgaacttgcttttgatgacgtcatcacttcatgagcattt 10251262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16235299 - 16235174
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||| ||  |||||| ||||| |||  ||||||| ||||||||    
T  16235299 gcattcaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcattgtttagacgagattaaatcaattgaacaacctttgaa 16235200  T
Q  100 gctttaattctctcagcttatgatga 125  Q
    | ||||| |||  || ||||||||||    
T  16235199 gttttaaatcttgcatcttatgatga 16235174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 26702130 - 26701989
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagc 101  Q
    ||||||||||||||| | | |||||||||   ||| ||||||||| || ||||| ||||||||| | ||| ||||  |||  |  |||||||||||||||    
T  26702130 atccaatgccttcaacttcatttgaattaattgttgcttcactctcctggtcttctgcaatgctcaaacgagattgaatccatataacagcctttgaagc 26702031  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||||| |||| || ||| |||||| ||| | |||||||||||    
T  26702030 tttaagtctcccatcttctgatgaactttagcttctggtgat 26701989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2834767 - 2834811
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcact 45  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||    
T  2834767 gcatccaatgccttcaaatcctttcaaattagccgttgcttcact 2834811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 30893314 - 30893390
Alignment:
Q  173 cttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcct 248  Q
    ||||||| |||||||||| |||||||| ||| | ||||||||||| | | ||| ||||||||||||||||| |||||    
T  30893314 cttgcttctgatgacgtcatcacttcaggagtactttgacttcaggagcacttctcttcagatgcttcaagtttcct 30893390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 16235152 - 16235062
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttga--cttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||| ||| |||||||||| |||||||| ||||| |||   |||||| | | ||| | ||||||||||||||||||||||    
T  16235152 gcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttgtgtcttcaggagcacttcttttcagatgcttcaagcttcctt 16235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 10757499 - 10757656
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    |||||||||| ||||||||||||  || |||  ||| ||||||||||||  | || |||||||| |||||| ||||| |||  ||||||| || ||||||    
T  10757499 catccaatgctttcaaatcctttcaaaatagttgttgcttcactcttctgattttctgcaatgcttagacgagattaaatccattgaacaaccttttgaa 10757598  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||||| ||| || |||| || ||||||||||    
T  10757599 gctttaagtcttgcatctcctgatgaacttcagcttttgatgatcttgcttctgatga 10757656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 35040390 - 35040479
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||| ||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  35040390 gcttctgataaacttgcttctgatgacgtcaccacttcatgagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctt 35040479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 46089218 - 46089263
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  46089218 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 46089263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 39200848 - 39200804
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||||||||||||||  ||||||| |||||    
T  39200848 gcttttgatgaacttgcttttgatgacgtcaccacttcaggagca 39200804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 249
Target Start/End: Original strand, 40722 - 40974
Alignment:
Q  8 atgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagctttaat 107  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||  ||||||| ||||||||||||||||||||||||| |||    
T  40722 atgccttcaaattcttttgaattagccgttgcttcactcttctggtcttctgcaatgctaggtgtgattaaatcttttgaacagcctttgaagcttcaat 40821  T
Q  108 tctctcagcttatgatgatcttca-----------acttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcact 196  Q
    ||||||| ||| ||||||||||||            |||||||||||||| ||||| ||||||||||| |||||| ||| ||| ||||||| ||  ||||    
T  40822 tctctcatcttctgatgatcttcagatggaaaactgcttctggtgatgttgcttctaatgaggtgcttctgatgatcttacttctgatgacatcaccact 40921  T
Q  197 tcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||| ||||  |||| ||||||||| |||||||||||||| ||||| |||||||    
T  40922 tcaggagcccttgagttcagaaccacttttcttcagatggttcaaacttcctt 40974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 220316 - 220566
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||||||| || ||||| ||||||||| ||||| ||||| | |   |||||||||||||||    
T  220316 gcatccaatgc-ttcaaattcatttgaattagccgttgcttcactctcctggtcttctgcaatgcttagacgagattaaaaccaatgaacagcctttgaa 220414  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| ||||||| ||  |||||| ||||| ||||||||||| ||   ||||||||||||||||| |||||||||||||| |||||||||| | ||||    
T  220415 gctttaagtctctcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcattactt 220514  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |||||||||| | | |||||||||||| |||||||| ||||||    
T  220515 caggagcacttgacttcaggagcacttttcttcagacgcttcaaggttcctt 220566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 244151 - 244034
Alignment:
Q  133 cttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcag 232  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  244151 cttctggtgatgttgcttctgatgaggtacttttgatgaacttgcttttgatgacgtcatcacttcatgagcacttgacttcagaacctcttttcttcag 244052  T
Q  233 atgcttcaagcttccttc 250  Q
    ||||||||||||||||||    
T  244051 atgcttcaagcttccttc 244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 244317 - 244188
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| |||||||||||||||||||||  ||| |||||||||||| ||||| ||||| || || |||||||| |||||||||||||||||||||     
T  244317 gcatccaatgtcttcaaatccttttgaattagttgttgcttcactcttctggtcttctgcaacgccaggcgtgattaaatcttttgaacagcctttgaaa 244218  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    ||| |||||||||| ||| | ||||||||||    
T  244217 cttcaattctctcatcttct-atgatcttca 244188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 377592 - 377385
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  |  ||| |||| |||||||||||  ||||| ||||||||| ||||| ||||| |||  || |||| | ||||||    
T  377592 gcatccaatgccttcaaatcctttcaatatagtcgttgcttcactcttccggtcttctgcaatgcttagacgagattaaatccattcaacaacatttgaa 377493  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    | ||||| |||  || ||  |||||| ||  ||||||||||||| ||   ||||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  377492 gttttaagtcttgcatctcctgatgaactataacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcactt 377393  T
Q  198 caagagca 205  Q
    || |||||    
T  377392 caggagca 377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 6085 - 6320
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||||||||||||||||  ||| ||||  |||||| ||||| ||||||||||| |||||||| ||| ||||||||| ||||||||    
T  6085 gcatccaatgccttcaaatccttttgaattagttgttgcttcggtcttctggtcttctgcaatgctaggcgtgattaaatcctttgaacagtctttgaag 6184  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaa 200  Q
    |||||| ||||||| ||| |||||| ||||||||||| ||||| |              ||||| |||||||||||||| |||||||||| ||||||||     
T  6185 ctttaaatctctcatcttctgatgaacttcaacttctagtgatat--------------tgcttctgatgaacttgcttctgatgacgtcatcacttcag 6270  T
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    || || |||||||||| | | |||||||||||||||||||||||||||||    
T  6271 gaacacttgacttcaggagcacttttcttcagatgcttcaagcttccttc 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 642770 - 642520
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||| |   |||||||||||||||  |||||||| ||  |||| || ||||||||  ||||||| |||  ||||||| |||||||||    
T  642770 gcatccaatgccttcaactttatttgaattagccgttgtttcactctcctgatcttctgtaatgctaggtgtgattaaatccattgaacaacctttgaag 642671  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||| ||||||| ||| |||||| || ||| |||||||||| ||   | ||| ||||||||||| |||||||||||||| |||||||||| |||||||    
T  642670 ctttaagtctctcatcttctgatgaactgcaatttctggtgatcttcagcatctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttc 642571  T
Q  199 aagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |  |||| |||||||||| | | |||||||||||| |||||||||||||||    
T  642570 agaagcacttgacttcaggatcacttttcttcagacgcttcaagcttcctt 642520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 21099767 - 21099517
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||  | | ||||||||||  ||| |||||||||  | |||||||| |||||||| | |||||| |||  || ||||||||||||||    
T  21099767 gcatccaatgccttcagcttcatttgaattagttgttgcttcactctcttggtcttttgtaatgctaggcatgattaaatccatttaacagcctttgaag 21099668  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||| ||||| | ||| |||||| ||| | ||||||||||| ||   ||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  21099667 ctttaagtctctgatcttctgatgaactttagcttctggtgattttcagcttctgatgaggtgcttttgatgaacttgcttctgatgacgtcatcacttc 21099568  T
Q  199 aagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | ||||| |||||||||  | | |||||||||||| ||||||||| |||||    
T  21099567 aggagcacttgacttcatgagcacttttcttcagacgcttcaagcctcctt 21099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23881141 - 23881388
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagccttt-gaa 99  Q
    ||||||||||||||||| | | |||||||||| |||| ||||||||| || ||||| ||||||||||| |||||||| |||  || |||| ||||| |||    
T  23881141 gcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctggtcttctgcaatgctaggcgtgattaaatccattaaacaaccttttgaa 23881240  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    |||||| | |||||| ||| |||||| ||||| ||||||||| | ||   ||||||||||||||||| |||||| ||||||| |||||| ||| ||||||    
T  23881241 gctttagt-ctctcatcttctgatgaacttcagcttctggtgttcttcagcttctgatgaggtgcttctgatgaccttgcttctgatgatgtcatcactt 23881339  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    || ||||| | |||||||  | | |||||||||||| ||||||||||||    
T  23881340 caggagcagtagacttcaagagcacttttcttcagacgcttcaagcttc 23881388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 17815042 - 17815293
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||| ||||||||||||   | ||| |||| ||||||||||| |||||| ||||||||| ||||| ||||| |||  ||||||||||||||||    
T  17815042 gcatctaatgctttcaaatcctttcagaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 17815141  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  ||||||  || | ||||||||||| || ||||||||||| ||||| |||||||||||||  |||||||||| ||||||||    
T  17815142 gctttaagtcttgcatctcttgatgaaatttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgctactgatgacgtcatcacttca 17815241  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     |||||  |||| |||||| | | ||| |||||||||| || ||||||||||    
T  17815242 ggagcacttttgtcttcaggagcacttctcttcagatgttttaagcttcctt 17815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25096886 - 25096756
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||||||||||  |||| |||||||||||| ||||| ||||||||||| ||| |||| ||| |||||||| |||||||||    
T  25096886 gcatccaatgtcttcaaatccttttgaattaatcgttgcttcactcttctggtcttctgcaatgctaggcgtaattaaatcctttgaacaacctttgaag 25096787  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    |||||| ||||| | ||||||||||||||||    
T  25096786 ctttaagtctcttatcttatgatgatcttca 25096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25154856 - 25154726
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||||||||||  |||| |||||||||||| ||||| ||||||||||| ||| |||| ||| |||||||| |||||||||    
T  25154856 gcatccaatgtcttcaaatccttttgaattaatcgttgcttcactcttctggtcttctgcaatgctaggcgtaattaaatcctttgaacaacctttgaag 25154757  T
Q  101 ctttaattctctcagcttatgatgatcttca 131  Q
    |||||| ||||| | ||||||||||||||||    
T  25154756 ctttaagtctcttatcttatgatgatcttca 25154726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 21199066 - 21198910
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| | ||||||||||||||| || || | |||| ||||| |||| | |||| |||||||| ||| |||||||| |||||||||    
T  21199066 gcatccaatgccttcaaattcatttgaattagccgttgct-catttttctggtcttctgcagtactaggcgtgattaaatcctttgaacaacctttgaag 21198968  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgag 158  Q
    |||||| ||||||| ||| |||||| ||||| || |||||||| || |||||||||||    
T  21198967 ctttaagtctctcatcttctgatgaacttcagctcctggtgatattgcttctgatgag 21198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 7745756 - 7745577
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| |||||||||||||||||| | |||||| | || | ||||| |||  ||||||| ||||||||    
T  7745756 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttctagtcttctccaatgcttggatgcgattaaatccattgaacaacctttgaa 7745657  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgctt 179  Q
    ||||||| |||  || ||  |||||  ||||| ||||| ||||| || ||||||||||| ||||| ||||||||||||||    
T  7745656 gctttaagtcttacatctcctgatgtacttcagcttcttgtgatcttgcttctgatgagatgcttttgatgaacttgctt 7745577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 249
Target Start/End: Complemental strand, 9398723 - 9398571
Alignment:
Q  85 tgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgat 184  Q
    |||||| |||||||| |||||| ||||||| ||| |||||| ||||||||||||||||| ||            | |||| ||||||||||| | |||||    
T  9398723 tgaacaacctttgaacctttaagtctctcatcttctgatgaacttcaacttctggtgatctt------------gagcttctgatgaacttgatgttgat 9398636  T
Q  185 gacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||| |||||||| ||||| |||||||||| | | ||| |||||| |||||||||||||||||    
T  9398635 gacgtcatcacttcaggagcacttgacttcagcagcacttctcttcaaatgcttcaagcttcctt 9398571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 19536363 - 19536117
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactc-ttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| ||||||||| ||  ||  || |||| |||||||| || | ||||||||||||||| | ||| ||||  |||  |||||||||| |||||    
T  19536363 catccaatgctttcaaatccattcaaaaaagtcgttgcttcactccttttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaa 19536264  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||||  ||||| | ||| || ||||||||||| ||||| |||||||||| ||| |||||||||| ||||||||    
T  19536263 gctttaagtcttgcatctcctgatgaacttctgcttcttgcgatcttgcttctgatgagatgcttctgatgaacttacttctgatgacgtcatcacttca 19536164  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
     ||||| ||||  ||||| |   ||| |||| |||||||||||||||    
T  19536163 ggagcactttgtgttcaggagaacttctctttagatgcttcaagctt 19536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 41566496 - 41566354
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |||| ||||||| |||||||||| |||||||| |||||| ||||| |||  ||||| ||| |||||||    
T  41566496 catccaatgccttcaaatcctttcaaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaag 41566397  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    |||||| |||  || ||  |||||| || ||||||||| ||||    
T  41566396 ctttaagtcttgcatctcctgatgaactacaacttctgatgat 41566354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 6512490 - 6512337
Alignment:
Q  5 ccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaagctt 103  Q
    ||||||||||||||||||||  || ||| |||| ||||||||||| ||||||  ||||||| |||||| ||||| |||   |||||| ||||||||||||    
T  6512490 ccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctt 6512391  T
Q  104 taattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||| |||  || ||  |||||| || |||||||| ||||| || ||||||||||    
T  6512390 taagtcttgcatctcctgatgaactacaacttctagtgatcttgcttctgatga 6512337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 21910630 - 21910787
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||  |||| ||||||| ||| ||||||||| ||||| |||||| ||||| |||  || ||||||||||||     
T  21910630 gcatccaatgccttcaaatcctttcaaaataatcgttgcttcacttttccagtcttttgtaatgcttagacgagattaaatcaattcaacagcctttgac 21910729  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||| | ||||||||||| || ||||||||||    
T  21910730 gctttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatga 21910787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 23413037 - 23412880
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||  |||| |||||||||||| ||||| ||||||||| | | | ||||| |||  ||||||| ||||||||    
T  23413037 gcatccaatgctttcaaatcctttcaaaataatcgttgcttcactcttctggtcttctgcaatgcttggatgagattaaatccattgaacaacctttgaa 23412938  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| || ||||||||||    
T  23412937 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatga 23412880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 33022739 - 33022843
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||| | ||||| |||  |||||||||||||||||    
T  33022739 catccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaag 33022838  T
Q  101 cttta 105  Q
    |||||    
T  33022839 cttta 33022843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 25096733 - 25096665
Alignment:
Q  137 tggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||||||| ||||||| | ||||||| |||||||||||||| |||||||||| |||||||| |||||    
T  25096733 tggtgatgttgcttctgacggggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 25096665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 25154703 - 25154635
Alignment:
Q  137 tggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||||||| ||||||| | ||||||| |||||||||||||| |||||||||| |||||||| |||||    
T  25154703 tggtgatgttgcttctgacggggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 25154635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 6499480 - 6499546
Alignment:
Q  183 atgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||| |||||||| ||||| |||||||||||| | ||| | ||||||||||||||||||||||    
T  6499480 atgacgtcatcacttcatgagcacttgacttcagaaacacttcttttcagatgcttcaagcttcctt 6499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 89485 - 89328
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||| |||||| ||||||| ||||  || ||| |||| |||||||||||| ||||| |||||| | |||||| ||||| |||  ||||||| | ||||||    
T  89485 gcatgcaatgctttcaaattctttcaaaatagtcgttgcttcactcttctggtcttctgcaattcttagacgagattaaatccattgaacaacttttgaa 89386  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| | |  || ||  |||||| || |||||||||||||| || ||||||||||    
T  89385 gctttaagttttgcatctcctgatgaactacaacttctggtgatcttgcttctgatga 89328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 12352765 - 12352689
Alignment:
Q  116 cttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtc 190  Q
    |||||| ||| ||||| ||||||||||| ||   ||||||||||| ||||| |||||||||||||||||||||||||    
T  12352765 cttatggtgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatgaacttgcttttgatgacgtc 12352689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21072303 - 21072131
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||| ||||||||||||  || |||  ||| |||||||||||| ||||| |||||||||    ||||||| |||  | ||||| ||||| |||    
T  21072303 gcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcttctggtcttctgcaatgctgtgagtgattaaatccatagaacaaccttttaag 21072204  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatga 171  Q
    |||||| |||  || ||  |||||| ||||| ||||||||||| ||   ||||||||||| ||||| ||||||    
T  21072203 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatga 21072131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20550968 - 20551075
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttga 98  Q
    |||||||||||||||||||| |||  || ||| |||| ||||||||||||||| || |||||||| |||||| ||||| | |  ||||||| || |||||    
T  20550968 gcatccaatgccttcaaatcttttcaaaatagtcgttgcttcactcttctagttttctgcaatgcttagacgagattaaaaccattgaacaaccttttga 20551067  T
Q  99 agctttaa 106  Q
    ||||||||    
T  20551068 agctttaa 20551075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 89341 - 89264
Alignment:
Q  173 cttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||||| |||||||||| ||||||||  |||| ||||||||||||| | ||| ||||||||  ||||||||||||||    
T  89341 cttgcttctgatgacgtcatcacttcagtagcactttgacttcagaagcacttctcttcagacacttcaagcttcctt 89264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31117951 - 31118016
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct 66  Q
    ||||||||||||||||||| ||||  |||||| |||| ||||||| ||| |||||| |||||||||    
T  31117951 gcatccaatgccttcaaattctttcaaattagtcgttgcttcacttttccagtcttctgcaatgct 31118016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 10848985 - 10849029
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||    
T  10848985 gcttatgatgaacttgcttttgatgatgtcatcacttcaggagca 10849029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 29138310 - 29138222
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    ||||| |||||||||||||| |||||||||| ||||| || ||||| |||| |||||| | |  ||||||||||| |||| ||||||||    
T  29138310 tgcttctgatgaacttgcttctgatgacgtcatcactacaggagcactttgtcttcaggaacagttttcttcagacgctttaagcttcc 29138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 23391531 - 23391492
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  23391531 tgcttatgatgaacttgcttctgatgacgtcatcacttca 23391492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 26784577 - 26784667
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| |||||||||| | |||||| |||||  |||| |||||| | | ||| |||||||| |||| ||||||||||    
T  26784577 gcttctgatgaacttgcttctgatgacgtcatgacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcctt 26784667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11993962 - 11994024
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||| ||||||||| ||  ||||||||||| ||||||| ||| |||||| ||||||    
T  11993962 gcatccaatgctttcaaatcccttcaaattagccgttgcttcactattccagtcttctgcaat 11994024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 28139813 - 28139895
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    ||||||||||| || |||||||||| |||||||| ||||| |||  |||||| | |  |||||||||||||||| ||||||||    
T  28139813 tgatgaacttggttctgatgacgtcatcacttcaggagcagtttatcttcaggagcagttttcttcagatgctttaagcttcc 28139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 20551102 - 20551159
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||| ||||| | |||| ||||||| |||||||||| |||||||| |||||    
T  20551102 cttctgatgagatgcttctaatgagcttgcttctgatgacgtcatcacttcaggagca 20551159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 5430110 - 5430194
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||||| ||||||||||  |||||||  |||| |||| |||||| | | ||||||||| || |||| ||||||||||    
T  5430110 tgatgaacttgcttctgatgacgtcaccacttcagaagcactttgtcttcaggagcacttttcttcggacgctttaagcttcctt 5430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 249
Target Start/End: Complemental strand, 18652 - 18402
Alignment:
Q  3 atccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagc 101  Q
    ||||||||||||||||||||||  || ||| |||| ||||||||||| |||||| ||||||||| ||||| ||||| |||  ||||||||||||||||||    
T  18652 atccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagc 18553  T
Q  102 tttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||| |||     ||  |||||| || || ||||||||||| ||   ||| ||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  18552 tttaaatcttgtgtctcctgatgaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttca 18453  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||||||||||| | | ||| ||||||||||||||||||||||||    
T  18452 tgagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctt 18402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 74705 - 74831
Alignment:
Q  60 caatgctagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgagg 159  Q
    ||||||||| |||||||| ||| |||||||| |||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||  |||||||||||    
T  74705 caatgctaggcgtgattaaatcctttgaacaacctttgaagctttaattctcacagcttctgatgatgttcagcttctggtgatgttgtttctgatgagg 74804  T
Q  160 tgcttatgatgaacttgcttttgatga 186  Q
    |||||||||||||||||||| ||||||    
T  74805 tgcttatgatgaacttgcttatgatga 74831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 74659 - 74695
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgtt 37  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  74659 gcatctaattccttcaaatccttttgaattagccgtt 74695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 36808 - 36557
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  |||||| |||| ||||||| |||||||| | |||||||| |||||| ||||| ||   |||| |||||||||||    
T  36808 gcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaa 36709  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||||| ||||| ||||| |  | ||||||||||| ||||| | |||||||||||| |||||||||| ||||||    
T  36708 gctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcactt 36609  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |  |||| || | | ||| ||||||||||||||||||||||||    
T  36608 caggagcactatactttaggatcacttctcttcagatgcttcaagcttcctt 36557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 42197 - 42448
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  |||||| |||| ||||||| |||||||| | |||||||| |||||| ||||| ||   |||| |||||||||||    
T  42197 gcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaa 42296  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgt--ttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||||| ||||| ||||| |  | ||||||||||| ||||| | |||||||||||| |||||||||| ||||||    
T  42297 gctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcactt 42396  T
Q  198 caagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| |  |||| || | | ||| ||||||||||||||||||||||||    
T  42397 caggagcactatactttaggatcacttctcttcagatgcttcaagcttcctt 42448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 159139 - 159354
Alignment:
Q  7 aatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagctttaa 106  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||  |||||||||||| |||||||||||| ||| |||||||| ||||||||||| |||    
T  159139 aatgccttcaaattcatttgaattagccgttgcttcactcttctgatcttttgcaatgttagacgtgattaaatcctttgaacatcctttgaagctctaa 159238  T
Q  107 ttctctcagcttatgatgatcttcaacttctg-----------------gtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgt 189  Q
     ||||||| ||| ||||| |||||| ||||||                 |||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  159239 gtctctcatcttttgatggtcttcagcttctgatgaaaaactgcttcttgtgatgttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgt 159338  T
Q  190 cgtcacttcaagagca 205  Q
    | |||||||| |||||    
T  159339 catcacttcaggagca 159354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 39503 - 39741
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  ||||||  ||| ||||||||||||||||||||| |||| ||||||| ||||| |||  ||||||||||||||||    
T  39503 gcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacagcctttgaa 39602  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||    |||||         |||| |||||||||||||| ||||| |||  | ||||||    
T  39603 gctttaaatcttgcatctcctgatgaactagagcttctggtga----tcttc--------agcttctgatgaacttgcttctgatgtcgttatgacttca 39690  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||| ||||||||||| | | ||| ||||||||||||||||||||||||    
T  39691 agagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctt 39741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 137563 - 137801
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatg-ctagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||||||||||||||||  ||||||  ||| ||||||||||||||||||||| |||| ||||||| ||||| |||  ||||||||||||||||    
T  137563 gcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacagcctttgaa 137662  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||  | ||||||||||    |||||         |||| |||||||||||||| ||||| |||  | ||||||    
T  137663 gctttaaatcttgcatctcctgatgaactagagcttctggtga----tcttc--------agcttctgatgaacttgcttctgatgtcgttatgacttca 137750  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||| ||||||||||| | | ||| ||||||||||||||||||||||||    
T  137751 agagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctt 137801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9981 - 10151
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||| ||||||||||||| | |||||||||| ||||  | |||||||||  |||| |||||||||||||||||||| ||| || |||||||||||||||    
T  9981 gcatctaatgccttcaaattcatttgaattagtcgttgttgcactcttctgatcttctgcaatgctagacgtgattaaatccttagaacagcctttgaag 10080  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatga 171  Q
    |||||| | ||||| ||| |||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||    
T  10081 ctttaagtttctcatcttctgatgaacttcagcttctggtgatattgcttctaatgaggtgcttctgatga 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30302 - 30408
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||  |||| ||||||| ||||||||    
T  30302 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaa 30401  T
Q  100 gctttaa 106  Q
    |||||||    
T  30402 gctttaa 30408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 553 - 805
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||||| ||||| ||||| |||  ||||||| |||||||     
T  553 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgac 652  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||| | ||||||||||| ||   ||||||||||| ||||| |||| ||||||||| |||||||||| ||||||    
T  653 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcactt 752  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| ||||||||||  | | ||| ||||||||||||| ||||||||||    
T  753 catgagcattttgacttcaagagcacttctcttcagatgctttaagcttcctt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 21004 - 20752
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |  ||||| |||||||||||||||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||    
T  21004 gcatccaatgccttcaaatcctttcaaaatgaccgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatcaattgaacaacctttgaa 20905  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||||||||| ||||||| ||   ||||| ||||| ||||| ||||||||||| || |||||||||| ||||||    
T  20904 gctttaagtcttgcatctcttgatgaacttcaacttttggtgatcttcagcttctaatgagatgcttctgatgaacttgtttctgatgacgtcatcactt 20805  T
Q  198 caagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || ||||| | | ||||||| | | ||| |||||||| ||||||| |||||||    
T  20804 caggagcactattacttcaggagcacttctcttcagacgcttcaaacttcctt 20752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 4979 - 4728
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||||||||||||||||  || ||| |||  ||||||||||  |||||| | ||||||| ||||| ||||| |||  |||||||||||||||||    
T  4979 catccaatgccttcaaatcctttcaaaatagtcgtcgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacagcctttgaag 4880  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||| |||  || ||| |||||| ||  | ||||||||||| ||   ||| ||||||| ||||| |||||||||||||| ||||||| || |||||||    
T  4879 ctttaagtcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacatcatcacttc 4780  T
Q  199 aagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | ||||| ||||||||||| | | ||| |||||||||||||||| |||||||    
T  4779 aggagcactttgacttcaggagcacttctcttcagatgcttcaaacttcctt 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 19505 - 19256
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| || |||||||||  || |||  ||| |||||||||||||||||| |||||| || || ||  |||| |||  ||||||| | ||||||    
T  19505 gcatccaatgcttttaaatcctttcaaaatagttgttgcttcactcttctagtcttctgcaattcttaggcgaaattaaatccattgaacaacttttgaa 19406  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  | |||| || |||||||||||||| || ||||| ||||| ||||| |||||||||||||| |||||||||  ||||||||    
T  19405 gctttaagtcttgcatctcctcatgaactacaacttctggtgatcttgcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcacttca 19306  T
Q  200 agagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| |||||||||| | | ||| |||||||| |||||||||||||||    
T  19305 ggagcacttgacttcaggagcacttctcttcagacgcttcaagcttcctt 19256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 1551 - 1424
Alignment:
Q  4 tccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaagctt 103  Q
    ||||||||||||||||||||||||| ||| |||| |||||||| | ||||||| ||||||| | | |||||||| ||| |||||||| ||||||||||||    
T  1551 tccaatgccttcaaatccttttgaaatagtcgttgcttcactcctatagtcttctgcaatgatgggcgtgattaaatcatttgaacaacctttgaagctt 1452  T
Q  104 taattctctcagcttatgatgatcttca 131  Q
     |||||||||||||| ||||||||||||    
T  1451 caattctctcagcttctgatgatcttca 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 1334 - 1285
Alignment:
Q  201 gagcatttgacttcagaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  1334 gagcacttgtcttcagaacctcttttcttcagatgcttcaagcttccttc 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 212432 - 212683
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaat-tagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttga 98  Q
    ||||||||||| ||||||||||||| ||  |||  ||| |||||||||||||||||| ||||||||| ||||| ||||  |||  | ||| |||||||||    
T  212432 gcatccaatgctttcaaatccttttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttga 212531  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttc 198  Q
    |||||||| |||   | ||  ||||||  || | |||||| |||| || ||||||||||| ||||| |||||||||||||| |||||||||| | |||||    
T  212532 agctttaagtcttggatctcctgatgaagtttagcttctgatgatcttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttc 212631  T
Q  199 aagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    | ||||| ||||||||||| | | ||| |||||||| | |||||||||||||    
T  212632 aggagcactttgacttcaggagcacttctcttcagacgtttcaagcttcctt 212683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6231 - 6125
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||  |||| ||||||| ||||||||    
T  6231 gcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaa 6132  T
Q  100 gctttaa 106  Q
    |||||||    
T  6131 gctttaa 6125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 246133 - 246089
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| |||||||||| |||||||| |||||    
T  246133 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 246089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 9873 - 10123
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||| ||||||  || ||| |||| |||||||||| | ||||| |  |||||| ||||| ||||| |||  || ||||  | |||||    
T  9873 gcatccaatgctttcaagtcctttcaaaatagtcgttacttcactcttttggtcttctataatgcttagacgagattaaatccattaaacaaaccttgaa 9972  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||   ||||| ||||| ||||||||||| || ||| ||||||| ||||| |||| ||||||||| |||||||||| ||||||||    
T  9973 gctttaaatcttgcatctccagatgaacttcagcttctggtgatcttgcttatgatgagatgcttctgattaacttgcttctgatgacgtcatcacttca 10072  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||||||||||||| |  || ||||||||||||||||||||||||    
T  10073 ggagcactttgacttcagaagcatttctcttcagatgcttcaagcttcctt 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 10034 - 10176
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcc-tttgaa 99  Q
    ||||| ||||||||||||| | ||||||||||||||| |||||||||| | ||||| ||||||||||| |||||||| |||  |||||||||| ||||||    
T  10034 gcatcgaatgccttcaaattcatttgaattagccgttgcttcactcttatggtcttctgcaatgctaggcgtgattaaatccattgaacagccatttgaa 10133  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtga 142  Q
    ||||||| ||||| | ||| |||||| ||||| ||||||||||    
T  10134 gctttaagtctcttatcttctgatgaacttcagcttctggtga 10176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 5704 - 5846
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||||||||||||||||| | |||||| ||| |||| ||||| |||||||||||| || |||| ||| | |||||| | | ||||||||||||||||||    
T  5704 gcatccaatgccttcaaattcatttgaaatagtcgttgcttcattcttctagtcttctggaatgataggcatgattaaaacatttgaacagcctttgaag 5803  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    ||| |||||| ||||||| ||||||||||||||| ||| ||||    
T  5804 cttcaattctttcagcttctgatgatcttcaactcctgatgat 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 8119 - 8154
Alignment:
Q  215 agaacctcttttcttcagatgcttcaagcttccttc 250  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8119 agaacctcttttcttcagatgcttcaagcttacttc 8154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 819 - 568
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |  | ||||||| ||| |||||| ||||||||| ||||| ||||| ||   |||||||| |||||||    
T  819 gcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctgcaatgcttagacgagattaaattcattgaacagtctttgaa 720  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    | ||||| |||  || ||  |||||| ||| | ||||||||||| || ||||||||||| ||||| |||||||||||||| | |||||||| ||||||||    
T  719 gttttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaacttgcttctaatgacgtcatcacttca 620  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     |||||  |||| |||||| | | ||| ||||||||  ||| ||||||||||    
T  619 ggagcacttttgtcttcaggagcacttctcttcagacactttaagcttcctt 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26008 - 25801
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| ||||||||||||||| |||||| ||||| |||  ||||||| |||||||     
T  26008 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaacctttgac 25909  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||  || ||  |||||| ||| | ||||||||||| ||   ||||||||||| || || | |||||| ||||| |||||||||| ||||||    
T  25908 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgtttttcatgaacgtgcttctgatgacgtcatcactt 25809  T
Q  198 caagagca 205  Q
    || |||||    
T  25808 caggagca 25801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 60094 - 60299
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||| |||||||||||||  || ||| |||| ||||||| ||| |||||| |||||| || | ||| ||||| |||  ||||||| ||||||||    
T  60094 gcatccaatggcttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaattcttggacgagattaaatccattgaacatcctttgaa 60193  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||| |||||| ||| | ||||||||||| || ||||| ||||| ||||| | |||||||||| | |||||||||| |||| |||    
T  60194 gctttaagtcttgcatcttctgatgaactttagcttctggtgatcttgcttcttatgagatgcttctaatgaacttgcatctgatgacgtcatcacatca 60293  T
Q  200 agagca 205  Q
     |||||    
T  60294 ggagca 60299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 115719 - 115816
Alignment:
Q  120 tgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcag 216  Q
    |||||| | ||| ||||||||||| || ||||||||||| ||||| |||| |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  115719 tgatgaacatcagcttctggtgatcttgcttctgatgagatgcttctgataaacttgcttttgatgacgtcatcacttcaggagcactttgacttcag 115816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 151903 - 151775
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctagacgtgattagatcttttgaacagcctttgaag 100  Q
    ||||| ||||||||||||| | |||||||||||||||  |||||  |||| ||||| | |||| ||||  ||||||| ||| |||||||| |||||||||    
T  151903 gcatctaatgccttcaaattcatttgaattagccgttgtttcacgtttctggtcttctacaatactaggtgtgattaaatcctttgaacaacctttgaag 151804  T
Q  101 ctttaattctctcagcttatgatgatctt 129  Q
    |||||| ||||||| ||| || |||||||    
T  151803 ctttaagtctctcatcttctggtgatctt 151775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 151788 - 151716
Alignment:
Q  133 cttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||| || ||||| ||||||||||| |||||||||||||| |||||||||| |||||||| |||||    
T  151788 cttctggtgatcttgcttctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 151716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 5723 - 5473
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgctag-acgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||||| |||||||  || |||  ||| || |||||||| | |||| | |||| || | ||| ||||| |||  ||||||| ||||||||    
T  5723 gcatccaatgccttcatatcctttcaaaatagatgttgctccactcttccaatcttctacaatacttggacgagattaaatccattgaacaacctttgaa 5624  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||| ||| |||  || ||  |||||| ||||| |||| |||||| || |||||  |||| ||||| |||||||||||||| |||||||||| ||||||||    
T  5623 gctctaagtcttgcatctcctgatgaacttcagcttcaggtgatcttgcttctagtgagatgcttctgatgaacttgcttctgatgacgtcatcacttca 5524  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| ||| ||||||| | | ||| |||||||| |||||||| ||||||    
T  5523 ggagcacttttacttcaggagcacttctcttcagacgcttcaaggttcctt 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10047 - 10204
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| |||| |||||||||||||||||| ||||| || |||||| ||||  |||  ||||| ||||||||||    
T  10047 gcatccaatgctttcaaatcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaa 10146  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||||||||||| ||||| || ||||||||||    
T  10147 gctttaagtcttgcatctcctgatgaacttcaacttcttgtgatcttgcttctgatga 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14726 - 14913
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  14726 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 14825  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    ||||||| |||  ||  |  | ||||| || | ||||||||||| || ||||||||||| || || | ||||||| |||| |||||||    
T  14826 gctttaagtcttgcatttcctaatgatttttagcttctggtgatcttgcttctgatgagatgtttctaatgaactagcttctgatgac 14913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1738 - 1895
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||||||||  || ||| ||||  ||||||||||||||||| ||||| || |||||| ||||  |||  ||||||| ||||||||    
T  1738 gcatccaatgctttcaaatcctttcaaaatagtcgttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaa 1837  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    ||||||| |||  || ||  |||||| ||||| ||||||||||| || ||||||||||    
T  1838 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatga 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 27462 - 27226
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||| |||||| |  || |||| ||| ||||||||||  |||||| ||||||||| ||||| ||||| ||   ||||||| ||||||||    
T  27462 gcatccaatgccttcgaatcctatcaaaatagctgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttgaa 27363  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| ||||| | ||||||||| || ||||||||||              |||||||| |||||| ||| ||||||||    
T  27362 gctttaagtcttgcatctcctgatgaacttcagcatctggtgatcttgcttctgatga--------------acttgcttctgatgatgtcatcacttca 27277  T
Q  200 agagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     ||||| |||| |||||||| | ||| ||||||||||||||||||||||||    
T  27276 ggagcactttgccttcagaagcacttctcttcagatgcttcaagcttcctt 27226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22754 - 22860
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  22754 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 22853  T
Q  100 gctttaa 106  Q
    |||||||    
T  22854 gctttaa 22860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 16006 - 16109
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca--tttgacttcagaacctcttttcttcagatgcttcaagctt 245  Q
    ||||||||||| || || |||||||||||||| |||||| ||| |||||||| |||||  ||||||||||| | | | | ||||||||||||||||||||    
T  16006 cttctgatgagatggttctgatgaacttgcttctgatgatgtcatcacttcatgagcacttttgacttcaggagcacatctcttcagatgcttcaagctt 16105  T
Q  246 cctt 249  Q
    ||||    
T  16106 cctt 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10141 - 9997
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcc-tttga 98  Q
    ||||||||||||||||||||||||  || ||| |||| |||||||||||||||||| ||||| || |||| | ||||| |||  ||||||| || |||||    
T  10141 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaaccttttga 10042  T
Q  99 agctttaattctctcagcttatgatgatcttcaacttctggtgat 143  Q
    |||||||| |||  || ||  |||||| ||||| |||||||||||    
T  10041 agctttaagtcttgcatctcctgatgaacttcagcttctggtgat 9997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 15196 - 15352
Alignment:
Q  2 catccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaag 100  Q
    |||||||||| ||||||||||||  || ||| || | |||||||||||| ||||| |||||||| |||||| ||||| |||  |||| ||||||||||||    
T  15196 catccaatgctttcaaatcctttcaaaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaag 15295  T
Q  101 ctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatga 157  Q
    |||||| |||  || ||  | |||  ||||| ||||||||||| || ||||||||||    
T  15296 ctttaagtcttgcatctccttatgcacttcatcttctggtgatcttgcttctgatga 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 12287 - 12540
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||| ||||||| ||||  || |||  ||| ||||||||||| |||||| |||||||| |||||| ||||| ||   ||||||||||||||||    
T  12287 gcatccaatgctttcaaattctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaattcattgaacagcctttgaa 12386  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcactt 197  Q
    ||||||| |||     ||  |||||| ||  | |||||||||||  |   ||||||||||| ||||| |||||||||||||| |||||||||| |||  |    
T  12387 gctttaagtcttgtgtctcctgatgaactagagcttctggtgatcctcaacttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcagct 12486  T
Q  198 caagagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    || |||||  |||  |||||| |   ||||| |||| |||||||||||||||||    
T  12487 caggagcacttttatcttcaggagaacttttattcaaatgcttcaagcttcctt 12540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 32563 - 32802
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| ||||| ||||||||||||  || ||| |||| ||||||||||| |||||| |||||||| |||||| ||||| |||  |||||||| |||||||    
T  32563 gcatcaaatgcattcaaatcctttcaaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagtctttgaa 32662  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    ||||||| |||  || ||  |||||| || ||| || ||||||| |||             |||| |||||||||| ||| |||||||||| ||||||||    
T  32663 gctttaagtcttgcatctcctgatgaactacaagttgtggtgatcttt------------agcttctgatgaacttacttctgatgacgtcatcacttca 32750  T
Q  200 agagca--tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
     |||||  |||| |||||||| | |||||||||||| || | ||||||||||    
T  32751 ggagcacttttgtcttcagaagcacttttcttcagacgccttaagcttcctt 32802  T

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Target: scaffold0084; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 49410 - 49584
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| ||||||||||| | |||| |||||||| |||||| ||||| |||  |||||||  |||||||    
T  49410 gcatccaatgccttcaaatcctttcaaaatagtagttgcttcactcttcaaatcttctgcaatgcttagacgagattaaatccattgaacaaactttgaa 49509  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtt--tcttctgatgaggtgcttatgatgaa 172  Q
    |||||||  ||  || ||  |||||| || |||||||||||||| ||   ||||||||||| ||||| |||||||    
T  49510 gctttaagacttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaa 49584  T

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Target: scaffold0084; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 378 - 342
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgtt 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  378 gcatccaatgccttcaaatcctttcaaattagccgtt 342  T

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Target: scaffold0065 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 1768 - 1955
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || |||  ||| |||||||| || |||||| |||||||| |||||| ||||| |||  ||||||| ||||||||    
T  1768 gcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaa 1867  T
Q  100 gctttaattctctcagcttatgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    ||||||| |||  ||  |  | ||||| || | ||||| ||||| || ||||||||||| || || | ||||||| |||| |||||||    
T  1868 gctttaagtcttgcatttcctaatgatttttagcttctagtgatcttgcttctgatgagatgtttctaatgaactagcttctgatgac 1955  T

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Target: scaffold0251 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 7786 - 7887
Alignment:
Q  6 caatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagcttt 104  Q
    ||||||||| ||||||||   || ||| |||  ||||||||||| |||||||||||||||| ||||| ||||| |||  |||||||||||||||||||||    
T  7786 caatgcctttaaatccttccaaaatagtcgtggcttcactcttccagtcttttgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 7885  T
Q  105 aa 106  Q
    ||    
T  7886 aa 7887  T

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Target: scaffold0395 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 13416 - 13318
Alignment:
Q  148 cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttc 246  Q
    ||||||||||| ||||| |||||||| ||||||| ||||| || |||||||| ||||| |  | ||||| | | ||| |||||||||||||||||||||    
T  13416 cttctgatgagatgcttctgatgaacatgcttttaatgacatcatcacttcaggagcactaaatttcaggagcacttctcttcagatgcttcaagcttc 13318  T

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Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19109 - 19215
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||| |||||||| ||||||||   || |||||||| ||||||||||| |||||| |||||||| | |||| ||||| |||  ||||||||||||| ||    
T  19109 gcatcaaatgcctttaaatccttccaaaatagccgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaacagcctttcaa 19208  T
Q  100 gctttaa 106  Q
    |||||||    
T  19209 gctttaa 19215  T

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Target: scaffold0217; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 9784 - 9828
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    ||||||||||||||||||| ||||||| || |||||||| |||||    
T  9784 gcttatgatgaacttgcttctgatgacatcatcacttcatgagca 9828  T

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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 215530 - 215468
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || |||||||| ||||||| |||||||||| ||||||    
T  215530 gcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttctagtcttctgcaat 215468  T

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Target: scaffold0485 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 9319 - 9252
Alignment:
Q  120 tgatgatcttcaacttctggtgatgtttcttctgatgaggtgcttatgatgaacttgcttttgatgac 187  Q
    |||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||||| ||| |||||||    
T  9319 tgatgaacttcagcttctggtgatcttgcttctgatgagatgcttctgatgaactttcttctgatgac 9252  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 23449 - 23362
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||| ||||||||||||||||||||||||  |||||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||    
T  23449 gcttctgatgaacttgcttttgatgacgttatcacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcc 23362  T

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Target: scaffold0243 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 205
Target Start/End: Complemental strand, 4988 - 4819
Alignment:
Q  39 cttcactcttctagtcttttgcaatgct-agacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcaacttct 137  Q
    ||||||||||  |||||| ||||||||| ||||| ||||| |||  ||||||| ||||||||||||||| |||  || ||  ||||||  |  ||||| |    
T  4988 cttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcttgatgaattaaaactttt 4889  T
Q  138 ggtgatgttt--cttctgatgaggtgcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||||| |    ||||| || || ||||| ||||||||||||||||||||||||  |||||||| |||||    
T  4888 ggtgatctccagcttctaataagatgcttttgatgaacttgcttttgatgacgttatcacttcaggagca 4819  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 90088 - 89982
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    ||||||||||||||||||||||||  || ||||||||  |||||||||| |||||| || ||| | |||||| ||||| ||   |||| || ||||||||    
T  90088 gcatccaatgccttcaaatcctttcaaaatagccgttggttcactcttccagtcttctgtaatacttagacgagattaaatacattgatcaacctttgaa 89989  T
Q  100 gctttaa 106  Q
    |||||||    
T  89988 gctttaa 89982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 89941 - 89852
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||| |||||||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  89941 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggaacaattttcttcagacgctttaagcttcctt 89852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 2598 - 2510
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagcattt--gacttcagaacctcttttcttcagatgcttcaagcttcc 247  Q
    |||| |||||||||||||| |||||||||| |||||||| ||||| ||  |||||||||| |  ||||||||||| |||| || |||||    
T  2598 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcagaagcagttttcttcagacgctttaatcttcc 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 553 - 469
Alignment:
Q  166 tgatgaacttgcttttgatgacgtcgtcacttcaagagca-tttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    |||||||||||||| ||||||||||  ||||||| ||||| |||| |||||| | |  ||||||||||| |||| ||||||||||    
T  553 tgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctt 469  T

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Target: scaffold1359; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 688 - 626
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||    
T  688 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 143166 - 143270
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaatgc-tagacgtgattagatcttttgaacagcctttgaa 99  Q
    |||||||||||||| ||||||||   || ||| |||| ||||||||||| |||||| |||||||| | |||| ||||| |||  ||||| ||||||| ||    
T  143166 gcatccaatgcctttaaatccttccaaaatagtcgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaa 143265  T
Q  100 gcttt 104  Q
    |||||    
T  143266 gcttt 143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 246
Target Start/End: Original strand, 145160 - 145191
Alignment:
Q  215 agaacctcttttcttcagatgcttcaagcttc 246  Q
    ||||||||||||||||||||||||||||||||    
T  145160 agaacctcttttcttcagatgcttcaagcttc 145191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 937 - 976
Alignment:
Q  160 tgcttatgatgaacttgcttttgatgacgtcgtcacttca 199  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  937 tgcttatgatgaacttgcttctgatgacgtcatcacttca 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 60740 - 60666
Alignment:
Q  175 tgcttttgatgacgtcgtcacttcaagagcatttgacttcagaacctcttttcttcagatgcttcaagcttcctt 249  Q
    ||||| |||||||||| |||||||| ||||| |  ||||||| | | ||| |||||||| |||||||||||||||    
T  60740 tgcttctgatgacgtcctcacttcaggagcactaaacttcaggagcacttctcttcagacgcttcaagcttcctt 60666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 78399 - 78337
Alignment:
Q  1 gcatccaatgccttcaaatccttttgaattagccgttccttcactcttctagtcttttgcaat 63  Q
    ||||||||||||||||||||||||  || ||| |||| ||||||| ||| |||||| ||||||    
T  78399 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 78337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 65315 - 65271
Alignment:
Q  161 gcttatgatgaacttgcttttgatgacgtcgtcacttcaagagca 205  Q
    |||| |||||||||||||| ||||||| || ||||||||||||||    
T  65315 gcttctgatgaacttgcttctgatgacatcatcacttcaagagca 65271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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