View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7874_low_9 (Length: 361)
Name: NF7874_low_9
Description: NF7874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7874_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 410257 - 410133
Alignment:
| Q |
1 |
aatccttttgcacgccttgcaacttcagatccaacttttccaaatcccattattgctaatgttttcccaaccatagatactcccacatacttgcttctta |
100 |
Q |
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| T |
410257 |
aatccttttgcacgccttgcaacttcagatccaacttttccaaaccccattattgctaatgttttcccaaccatagatactccaacatacttgcttctca |
410158 |
T |
|
| Q |
101 |
gccattttcctgcaaaaattatcaa |
125 |
Q |
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||||||||||||||||||||||||| |
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| T |
410157 |
gccattttcctgcaaaaattatcaa |
410133 |
T |
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