View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7876_high_2 (Length: 630)

Name: NF7876_high_2
Description: NF7876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7876_high_2
NF7876_high_2
[»] chr5 (5 HSPs)
chr5 (10-613)||(39162463-39163066)
chr5 (121-231)||(36032257-36032367)
chr5 (137-345)||(29794416-29794622)
chr5 (121-183)||(28034388-28034450)
chr5 (62-104)||(29794645-29794687)
[»] chr2 (2 HSPs)
chr2 (123-302)||(21374900-21375076)
chr2 (406-486)||(21637942-21638025)
[»] chr7 (5 HSPs)
chr7 (10-195)||(19863912-19864094)
chr7 (62-185)||(25854136-25854259)
chr7 (404-486)||(41151217-41151303)
chr7 (112-178)||(25871216-25871282)
chr7 (320-375)||(7220211-7220266)
[»] chr1 (4 HSPs)
chr1 (123-230)||(36495680-36495787)
chr1 (406-525)||(21090124-21090243)
chr1 (406-486)||(22024148-22024231)
chr1 (66-94)||(36496257-36496285)
[»] chr4 (5 HSPs)
chr4 (406-523)||(36192552-36192669)
chr4 (406-523)||(46494402-46494519)
chr4 (133-186)||(29172155-29172208)
chr4 (404-486)||(32139209-32139294)
chr4 (450-525)||(50399694-50399765)
[»] chr3 (2 HSPs)
chr3 (406-486)||(55468044-55468128)
chr3 (450-524)||(48077993-48078063)
[»] chr8 (2 HSPs)
chr8 (320-374)||(5124638-5124692)
chr8 (450-522)||(28739613-28739681)


Alignment Details
Target: chr5 (Bit Score: 514; Significance: 0; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 10 - 613
Target Start/End: Original strand, 39162463 - 39163066
Alignment:
Q  10 aagaatatcatgattttacccttaaaatttgaaccgtctaaagagcaatttaccgttttcaaccctaaaccctttcattcattacatgttctctgnnnnn 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||         
T  39162463 aagaaaatcatgattttacccttaaaatttgaaccgtctaaagagaaatttaccgttttcaaccctaaaccctttcattcattacatgttctctgttttt 39162562  T
Q  110 nnatcatatggttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttagattaaatctctaa 209  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39162563 ttatcatatggttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttacattaaatctctaa 39162662  T
Q  210 ctagtaattgttttatcatatannnnnnngttctcctctgtttgtaatacattctctcctctgttcttatacaatctatcctttgtgaccccgctaccgg 309  Q
    ||||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39162663 ctagtaattgttttatcatatatttttttgttctcctctgtttttaatacattctctcctctgttcttatacaatctatcctttgtgaccccgctaccgg 39162762  T
Q  310 ggatcctgcaatcccactattggggtcggccactccacgctgctatccaggatcgactacctagattcaaacctaacttttagttgataacagtaattta 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39162763 ggatcctgcaatcccactattggggtcggccactccacgctgctatccaggatcgactacctagattcaaacctaacttttagttgataacagaaattta 39162862  T
Q  410 gggtgatgggacggtgccccagtccaaggcacagaaaaccggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagggcactagt 509  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  39162863 gggtgatgggacggtgccccagtccaaggcacagaagaccggctcaaagagcatttacacaaggtatttacatttaccttcctcctccaagggcactagt 39162962  T
Q  510 agggctcgaacccgaacctcaagccctcttcttcaaaactaactttttggattcaaaaactcatgtatatatcaataaaactaaatccaattaatttcat 609  Q
     ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39162963 tgggctcgaacccggatctcaagccctctccttcaaaactaactttttggattcaaaaactcatgtatatatcaataaaactaaatccaattaatttcat 39163062  T
Q  610 acat 613  Q
    ||||    
T  39163063 acat 39163066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 36032257 - 36032367
Alignment:
Q  121 ttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttagattaaatctctaactagtaattgt 220  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||    
T  36032257 ttttttgtttattacattggaattagctactacttgaatagacattaaaagacacattgaatctctcctcagttacattgaatctctaactagtaattgt 36032356  T
Q  221 tttatcatata 231  Q
    |||||||||||    
T  36032357 tttatcatata 36032367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 137 - 345
Target Start/End: Complemental strand, 29794622 - 29794416
Alignment:
Q  137 ttggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttagattaaatctctaactagtaattgttttatcatat-annnn 235  Q
    ||||||||| ||||||||||||||||||  |||||||| ||| ||||||||  |||||| ||| |||||||||||| |||||| ||||||||||          
T  29794622 ttggaatcatctactacttgaatagacatgaaaagacatattgaatctctc--ctgttacattgaatctctaactaataattgctttatcatatgtattt 29794525  T
Q  236 nnngttctcctctgtttgtaatacattctctcctctgttcttatacaatctatcctttgtgaccccgctaccggggatcctgcaatcccactattggggt 335  Q
       |||||| ||||||| | ||||| |||||||||| |||||||||||||||||||| |    ||||||||| ||||||| ||  |||||||  ||||||    
T  29794524 tttgttctcttctgttt-ttatacaatctctcctctattcttatacaatctatccttcgcactcccgctacctgggatcccgctttcccacttgtggggt 29794426  T
Q  336 cggccactcc 345  Q
    ||||||||||    
T  29794425 cggccactcc 29794416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 28034388 - 28034450
Alignment:
Q  121 ttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatc 183  Q
    |||||||||||||||||| | || |||||||||| ||||||||| ||||||||||||| ||||    
T  28034388 ttttttgtttgttacatttgtataagctactactagaatagacattaaaagacacattgaatc 28034450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 29794687 - 29794645
Alignment:
Q  62 ccgttttcaaccctaaaccctttcattcattacatgttctctg 104  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  29794687 ccgttttcaaccctaaaccctttcgttgattacatgctctctg 29794645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 123 - 302
Target Start/End: Complemental strand, 21375076 - 21374900
Alignment:
Q  123 ttttgtttgttaca-ttggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttagattaaatctctaactagtaattgtt 221  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||    
T  21375076 ttttttttgttacaattggtatcagctactacttgaatagacattaaaagacacattaaatctctcctatgttacattgaatctctaactagtaattgtt 21374977  T
Q  222 ttatcatatannnnnnngttctcctctgtttgtaatacattctctcctctgttcttatacaatctatcctttgtgaccccg 302  Q
    ||||| |||        |||||      ||| | ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  21374976 ttatcgtatctatttttgttct----gtttttttatacaatctctcctctgttcttatacaatctatcctttgtgatcccg 21374900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 21638025 - 21637942
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttac 486  Q
    |||||||||| |||| ||||||| ||||||||||| |||| |||    ||||||||||||| |||| ||||||||||||||||||    
T  21638025 tttagggtgaggggatggtgccctagtccaaggcagagaagacctttgggctcaaagagcacttac-aaaggtatttacatttac 21637942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 19864094 - 19863912
Alignment:
Q  10 aagaatatcatgattttacccttaaaatttgaaccgtctaaagagcaatttaccgttttcaaccctaaaccctttcattcattacatgttctctgnnnnn 109  Q
    ||||| |||| |||| ||||||| ||||||||||||| | ||| ||||||| | ||||||||| | |||||||| ||||||||||||||||| |          
T  19864094 aagaaaatcacgattgtacccttgaaatttgaaccgtttgaagggcaattt-cggttttcaactccaaacccttccattcattacatgttctgt-ttttt 19863997  T
Q  110 nnatcatatggttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgtta 195  Q
      ||| |||| |||||||||||||||| |||||||||||||||| | |||||||| |||||||||| || ||||||||||||||||    
T  19863996 ttatcgtatgtttttttgtttgttacagtggaatcagctactacat-aatagacattaaaagacacgttgaatctctcctctgtta 19863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 25854259 - 25854136
Alignment:
Q  62 ccgttttcaaccctaaaccctttcattcattacatgttctctgnnnnnnnatcatatggttttttgtttgttacattggaatcagctactacttgaatag 161  Q
    ||||||||||||||||| |||||||||||| ||||||||||||        | | |||  ||||||||||||||| || ||||| ||||||||||||||     
T  25854259 ccgttttcaaccctaaatcctttcattcatcacatgttctctggttttttttaacatgtgtttttgtttgttacaatgaaatcaactactacttgaatat 25854160  T
Q  162 acaataaaagacacattcaatctc 185  Q
    ||| ||||||||||||| ||||||    
T  25854159 acattaaaagacacatttaatctc 25854136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 41151303 - 41151217
Alignment:
Q  404 aatttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttac 486  Q
    |||||||||||| |||| |||||||||||||||||||  ||| |||    ||||||||||||| |||||||||||| ||||||||||    
T  41151303 aatttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaaggtaattacatttac 41151217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 25871282 - 25871216
Alignment:
Q  112 atcatatggttttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacatt 178  Q
    |||||||| |||||||||||| ||| |||||||| |||||||||||||| |||  ||||||||||||    
T  25871282 atcatatgtttttttgtttgtgacaatggaatcaactactacttgaatatacatcaaaagacacatt 25871216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 7220266 - 7220211
Alignment:
Q  320 atcccactattggggtcggccactccacgctgctatccaggatcgactacctagat 375  Q
    ||||| || |||||||||||||||||| |||||||||| |||| ||||||||||||    
T  7220266 atcccgcttttggggtcggccactccatgctgctatccgggattgactacctagat 7220211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 36495787 - 36495680
Alignment:
Q  123 ttttgtttgttacattggaatcagctactacttgaatagacaataaaagacacattcaatctctcctctgttagattaaatctctaactagtaattgttt 222  Q
    |||| ||||||||||||||||||||| |||||||||| || | ||||||||||||| |||| ||||||||||| ||  |||||||||||||||||| |||    
T  36495787 ttttttttgttacattggaatcagctcctacttgaatggatattaaaagacacattgaatcactcctctgttacatcgaatctctaactagtaatttttt 36495688  T
Q  223 tatcatat 230  Q
    ||||||||    
T  36495687 tatcatat 36495680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 525
Target Start/End: Complemental strand, 21090243 - 21090124
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagg 501  Q
    ||||| |||| |||| |||||||||||||||||||  ||| |||    |||||||||||||||||| ||| ||||||||||||||   |  ||||||| |    
T  21090243 tttagagtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttac-aaatgtatttacatttac---ctccctccaacg 21090148  T
Q  502 gcactagtagggctcgaacccgaa 525  Q
    |||||||  |||||||||||||||    
T  21090147 gcactagcggggctcgaacccgaa 21090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 22024231 - 22024148
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttac 486  Q
    |||||||||| |||| ||||||||||||||||||| |||| |||    ||||||||||||| |||| ||||||| ||||||||||    
T  22024231 tttagggtgaggggatggtgccccagtccaaggcagagaagaccttcgggctcaaagagcacttac-aaaggtaattacatttac 22024148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 94
Target Start/End: Complemental strand, 36496285 - 36496257
Alignment:
Q  66 tttcaaccctaaaccctttcattcattac 94  Q
    |||||||||||||||||||||||||||||    
T  36496285 tttcaaccctaaaccctttcattcattac 36496257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 523
Target Start/End: Complemental strand, 36192669 - 36192552
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagg 501  Q
    |||||||||| |||| ||||||||||||||||| |  ||| |||    |||||||||||||||||||||| ||| ||||||||||   |  ||||||| |    
T  36192669 tttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcatttacaaaa-gtaattacatttac---ctccctccaaag 36192574  T
Q  502 gcactagtagggctcgaacccg 523  Q
    |||||||| |||||||||||||    
T  36192573 gcactagtggggctcgaacccg 36192552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 523
Target Start/End: Original strand, 46494402 - 46494519
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagg 501  Q
    |||||||||| |||| ||||||||||||||||| |  ||| |||    ||||||||||||| ||||||| |||||||||||||||   |  ||||||| |    
T  46494402 tttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcacttacaaa-ggtatttacatttac---ctccctccaaag 46494497  T
Q  502 gcactagtagggctcgaacccg 523  Q
    |||||||| |||||||||||||    
T  46494498 gcactagtggggctcgaacccg 46494519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 29172155 - 29172208
Alignment:
Q  133 tacattggaatcagctactacttgaatagacaataaaagacacattcaatctct 186  Q
    |||||||||||||||||||||||||||||||| |||||||  |||| |||||||    
T  29172155 tacattggaatcagctactacttgaatagacattaaaagatgcattgaatctct 29172208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 32139294 - 32139209
Alignment:
Q  404 aatttagggtgatgggacggtgccccagtccaaggcacagaaaacc----ggctcaaagagcatttacaaaaggtatttacatttac 486  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||    |||||||||| || |||| ||||||| ||||||||||    
T  32139294 aatttagggtgaagggatggtgccccagtccaaggcagagaagaccttcaggctcaaagaacacttac-aaaggtaattacatttac 32139209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 525
Target Start/End: Original strand, 50399694 - 50399765
Alignment:
Q  450 ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagggcactagtagggctcgaacccgaa 525  Q
    |||||||||| || ||||||| |||||||||||||||   | ||||||||| |||||||  |||||||||||||||    
T  50399694 ggctcaaagaacacttacaaa-ggtatttacatttac---cttcctccaagagcactagcggggctcgaacccgaa 50399765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 55468128 - 55468044
Alignment:
Q  406 tttagggtgatgggacggtgccccagtccaaggcacagaaaacc-----ggctcaaagagcatttacaaaaggtatttacatttac 486  Q
    |||||||||| |||| ||||||||||||||||||| |||| |||     ||||||||||||| |||| ||||||||||||||||||    
T  55468128 tttagggtgaggggatggtgccccagtccaaggcagagaagaccttcggggctcaaagagcacttac-aaaggtatttacatttac 55468044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 450 - 524
Target Start/End: Original strand, 48077993 - 48078063
Alignment:
Q  450 ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagggcactagtagggctcgaacccga 524  Q
    ||||||||||||| ||||||| | ||||||||||||| |||||||   || |||||||||  |||||||||||||    
T  48077993 ggctcaaagagcacttacaaa-gatatttacatttaccttcctcc---aaaggcactagtgaggctcgaacccga 48078063  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 5124638 - 5124692
Alignment:
Q  320 atcccactattggggtcggccactccacgctgctatccaggatcgactacctaga 374  Q
    |||||||| |||||||| ||| |||||||| ||||||| |||| |||||||||||    
T  5124638 atcccacttttggggtcagccgctccacgccgctatcctggattgactacctaga 5124692  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 450 - 522
Target Start/End: Original strand, 28739613 - 28739681
Alignment:
Q  450 ggctcaaagagcatttacaaaaggtatttacatttacgttcctcctccaagggcactagtagggctcgaaccc 522  Q
    ||||||||||||| ||||||| ||||||||||||||| |   |||||||| ||||||||| ||||| ||||||    
T  28739613 ggctcaaagagcacttacaaa-ggtatttacatttactt---tcctccaaaggcactagtggggcttgaaccc 28739681  T

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