View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7876_low_6 (Length: 361)

Name: NF7876_low_6
Description: NF7876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7876_low_6
NF7876_low_6
[»] chr6 (32 HSPs)
chr6 (116-220)||(31786444-31786547)
chr6 (17-113)||(8365447-8365538)
chr6 (44-113)||(10339053-10339122)
chr6 (44-113)||(4877994-4878062)
chr6 (18-112)||(3209423-3209518)
chr6 (17-112)||(16766737-16766827)
chr6 (53-100)||(21068084-21068131)
chr6 (47-113)||(17327589-17327655)
chr6 (45-111)||(17841530-17841596)
chr6 (36-113)||(10294161-10294238)
chr6 (36-113)||(18367890-18367967)
chr6 (44-109)||(32978842-32978907)
chr6 (56-100)||(21044826-21044870)
chr6 (44-112)||(28152149-28152217)
chr6 (47-111)||(31384984-31385048)
chr6 (44-112)||(34595185-34595253)
chr6 (17-112)||(9522931-9523021)
chr6 (47-112)||(9629448-9629513)
chr6 (36-112)||(16488519-16488595)
chr6 (17-112)||(9107299-9107389)
chr6 (54-100)||(21090632-21090678)
chr6 (76-113)||(426477-426514)
chr6 (44-100)||(853811-853867)
chr6 (56-113)||(8776907-8776964)
chr6 (76-113)||(10649371-10649408)
chr6 (44-113)||(28715346-28715415)
chr6 (76-112)||(5732474-5732510)
chr6 (36-112)||(5970037-5970113)
chr6 (44-112)||(7378030-7378098)
chr6 (36-112)||(8714034-8714110)
chr6 (48-112)||(17435265-17435329)
chr6 (44-112)||(24645532-24645600)
[»] chr8 (29 HSPs)
chr8 (25-112)||(34450961-34451048)
chr8 (17-112)||(22652016-22652106)
chr8 (17-113)||(29510232-29510323)
chr8 (44-112)||(31557047-31557115)
chr8 (20-111)||(29447040-29447126)
chr8 (51-113)||(18407777-18407839)
chr8 (46-112)||(36450694-36450760)
chr8 (44-113)||(5813643-5813712)
chr8 (36-112)||(21465466-21465542)
chr8 (36-112)||(26902104-26902180)
chr8 (41-112)||(12570438-12570509)
chr8 (41-112)||(12570664-12570735)
chr8 (47-116)||(8343381-8343450)
chr8 (44-112)||(3951476-3951544)
chr8 (36-112)||(15816058-15816134)
chr8 (36-112)||(29447498-29447574)
chr8 (47-110)||(3025605-3025668)
chr8 (44-111)||(43737752-43737819)
chr8 (46-112)||(11803323-11803389)
chr8 (48-110)||(15023199-15023261)
chr8 (17-59)||(17468485-17468527)
chr8 (47-113)||(22197670-22197736)
chr8 (48-112)||(6065586-6065650)
chr8 (56-112)||(14134762-14134818)
chr8 (56-100)||(22943301-22943345)
chr8 (44-112)||(33405324-33405392)
chr8 (76-112)||(34260390-34260426)
chr8 (36-112)||(41831875-41831951)
chr8 (62-110)||(44067596-44067644)
[»] chr3 (29 HSPs)
chr3 (17-113)||(41961578-41961669)
chr3 (44-113)||(40993274-40993343)
chr3 (56-110)||(28918066-28918120)
chr3 (44-112)||(18427000-18427068)
chr3 (44-112)||(55401126-55401194)
chr3 (58-113)||(5407198-5407253)
chr3 (46-113)||(7171554-7171621)
chr3 (44-89)||(10955003-10955048)
chr3 (56-111)||(15999951-16000006)
chr3 (17-112)||(34185052-34185142)
chr3 (44-110)||(4987222-4987288)
chr3 (36-113)||(14209167-14209244)
chr3 (17-111)||(14216932-14217021)
chr3 (17-111)||(14223061-14223150)
chr3 (47-112)||(27505305-27505370)
chr3 (63-111)||(1389908-1389956)
chr3 (44-112)||(13845465-13845533)
chr3 (36-88)||(14832153-14832205)
chr3 (44-112)||(20503516-20503584)
chr3 (62-112)||(2408590-2408640)
chr3 (47-101)||(3631738-3631792)
chr3 (62-112)||(11610578-11610628)
chr3 (62-111)||(51512118-51512167)
chr3 (36-112)||(15796223-15796299)
chr3 (62-110)||(24204983-24205031)
chr3 (62-110)||(25775576-25775624)
chr3 (41-113)||(26492144-26492216)
chr3 (44-112)||(35222989-35223057)
chr3 (61-113)||(40052380-40052432)
[»] chr2 (24 HSPs)
chr2 (17-112)||(26769551-26769641)
chr2 (17-112)||(30717459-30717549)
chr2 (36-112)||(35056922-35056998)
chr2 (44-111)||(28596520-28596587)
chr2 (36-113)||(37419797-37419874)
chr2 (44-112)||(24009346-24009414)
chr2 (44-99)||(12224274-12224329)
chr2 (44-110)||(2438661-2438727)
chr2 (36-112)||(32749754-32749830)
chr2 (17-112)||(11223793-11223882)
chr2 (44-110)||(19942316-19942382)
chr2 (47-113)||(34993921-34993987)
chr2 (46-112)||(38117099-38117165)
chr2 (47-112)||(42511322-42511387)
chr2 (44-112)||(27084320-27084388)
chr2 (36-112)||(36096304-36096380)
chr2 (29-112)||(21782744-21782827)
chr2 (48-110)||(15657930-15657992)
chr2 (44-114)||(15972924-15972994)
chr2 (44-101)||(5040785-5040842)
chr2 (76-113)||(19536360-19536397)
chr2 (44-113)||(20242666-20242735)
chr2 (56-112)||(3414928-3414984)
chr2 (44-112)||(37559028-37559096)
[»] chr1 (36 HSPs)
chr1 (44-114)||(37598882-37598952)
chr1 (44-112)||(32461393-32461461)
chr1 (44-111)||(40258874-40258941)
chr1 (62-112)||(2218297-2218347)
chr1 (36-113)||(6427518-6427595)
chr1 (36-113)||(40917803-40917880)
chr1 (17-100)||(6612112-6612190)
chr1 (17-112)||(47989537-47989627)
chr1 (39-113)||(25934673-25934747)
chr1 (36-113)||(9828098-9828175)
chr1 (17-114)||(31694637-31694729)
chr1 (46-110)||(16297223-16297287)
chr1 (44-112)||(18337380-18337448)
chr1 (47-110)||(1486646-1486709)
chr1 (61-112)||(1704935-1704986)
chr1 (57-112)||(17831462-17831517)
chr1 (44-113)||(1815308-1815377)
chr1 (44-113)||(51410076-51410145)
chr1 (36-112)||(18556385-18556461)
chr1 (44-112)||(22515827-22515895)
chr1 (44-112)||(46348323-46348391)
chr1 (36-83)||(27471524-27471571)
chr1 (44-82)||(21530740-21530778)
chr1 (58-112)||(34712323-34712377)
chr1 (44-110)||(42359391-42359457)
chr1 (57-111)||(48415667-48415720)
chr1 (44-113)||(5898205-5898274)
chr1 (67-112)||(6574051-6574096)
chr1 (47-100)||(19562567-19562620)
chr1 (44-113)||(39130706-39130775)
chr1 (41-98)||(40181919-40181976)
chr1 (63-111)||(10233326-10233374)
chr1 (51-111)||(10577676-10577736)
chr1 (76-112)||(16812639-16812675)
chr1 (76-112)||(27965940-27965976)
chr1 (44-112)||(38078601-38078669)
[»] chr4 (38 HSPs)
chr4 (44-113)||(16073445-16073514)
chr4 (44-112)||(23292926-23292994)
chr4 (36-111)||(30982808-30982883)
chr4 (47-112)||(28964188-28964253)
chr4 (47-111)||(3947702-3947766)
chr4 (25-113)||(16184863-16184951)
chr4 (36-124)||(19482722-19482810)
chr4 (63-113)||(18513174-18513224)
chr4 (61-110)||(22440559-22440608)
chr4 (20-113)||(24613629-24613717)
chr4 (36-112)||(5414101-5414177)
chr4 (47-111)||(14465006-14465070)
chr4 (44-112)||(34306744-34306812)
chr4 (44-112)||(49431077-49431145)
chr4 (58-109)||(28084589-28084640)
chr4 (36-110)||(19312389-19312463)
chr4 (39-112)||(903979-904052)
chr4 (59-112)||(18966575-18966628)
chr4 (36-113)||(22234818-22234895)
chr4 (36-112)||(24343555-24343632)
chr4 (56-112)||(715545-715601)
chr4 (56-112)||(752871-752927)
chr4 (56-112)||(29205531-29205587)
chr4 (64-111)||(5922532-5922579)
chr4 (59-110)||(7424724-7424774)
chr4 (36-107)||(30838264-30838335)
chr4 (44-114)||(4672023-4672093)
chr4 (58-112)||(42640589-42640643)
chr4 (56-113)||(3064867-3064924)
chr4 (76-113)||(11596296-11596333)
chr4 (64-113)||(17876237-17876286)
chr4 (47-96)||(38846968-38847017)
chr4 (44-112)||(2361915-2361983)
chr4 (44-112)||(8423658-8423726)
chr4 (44-112)||(12895214-12895282)
chr4 (63-111)||(40965341-40965389)
chr4 (36-112)||(46083920-46083996)
chr4 (38-113)||(53381529-53381605)
[»] chr5 (30 HSPs)
chr5 (36-112)||(32766872-32766948)
chr5 (44-112)||(42893411-42893479)
chr5 (17-111)||(21542070-21542159)
chr5 (36-112)||(21522804-21522880)
chr5 (36-112)||(21533370-21533446)
chr5 (48-112)||(21576685-21576749)
chr5 (47-112)||(31084382-31084447)
chr5 (44-109)||(39268541-39268606)
chr5 (44-108)||(30098982-30099046)
chr5 (36-112)||(39698595-39698671)
chr5 (36-111)||(6401552-6401627)
chr5 (44-110)||(21190998-21191064)
chr5 (44-110)||(30502330-30502396)
chr5 (44-110)||(30542673-30542739)
chr5 (47-113)||(32630674-32630740)
chr5 (44-113)||(28588613-28588682)
chr5 (47-112)||(30098391-30098456)
chr5 (44-113)||(43564932-43565001)
chr5 (36-112)||(21814315-21814391)
chr5 (46-113)||(27932288-27932355)
chr5 (17-88)||(30183589-30183655)
chr5 (47-110)||(43001859-43001922)
chr5 (59-113)||(14873588-14873642)
chr5 (41-99)||(26312817-26312875)
chr5 (44-113)||(11686000-11686069)
chr5 (36-112)||(7677759-7677835)
chr5 (44-100)||(15382536-15382592)
chr5 (44-112)||(17123099-17123166)
chr5 (64-112)||(19820328-19820376)
chr5 (50-110)||(23015926-23015986)
[»] chr7 (23 HSPs)
chr7 (17-112)||(24339682-24339772)
chr7 (47-113)||(5409770-5409836)
chr7 (47-113)||(9778559-9778625)
chr7 (17-113)||(7438746-7438837)
chr7 (44-112)||(21880203-21880271)
chr7 (36-112)||(25822709-25822785)
chr7 (44-112)||(598259-598327)
chr7 (56-112)||(29763129-29763185)
chr7 (41-113)||(1401073-1401143)
chr7 (47-112)||(1433513-1433578)
chr7 (44-112)||(7133212-7133281)
chr7 (44-113)||(15680860-15680929)
chr7 (47-112)||(43027404-43027469)
chr7 (68-112)||(5307331-5307375)
chr7 (44-111)||(32287404-32287471)
chr7 (34-112)||(11831484-11831562)
chr7 (47-112)||(32093954-32094020)
chr7 (48-97)||(15836439-15836488)
chr7 (47-112)||(21138931-21138996)
chr7 (63-112)||(28155624-28155673)
chr7 (48-112)||(21864863-21864927)
chr7 (56-108)||(27229244-27229296)
chr7 (69-113)||(35862027-35862071)
[»] scaffold0306 (1 HSPs)
scaffold0306 (44-110)||(13457-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (44-110)||(21804-21870)
[»] scaffold0380 (1 HSPs)
scaffold0380 (56-113)||(8664-8721)
[»] scaffold0053 (1 HSPs)
scaffold0053 (44-112)||(8849-8917)
[»] scaffold0003 (1 HSPs)
scaffold0003 (36-112)||(241648-241724)
[»] scaffold0361 (1 HSPs)
scaffold0361 (46-112)||(14580-14646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (36-113)||(71779-71856)
[»] scaffold0450 (1 HSPs)
scaffold0450 (36-112)||(8564-8640)
[»] scaffold0652 (1 HSPs)
scaffold0652 (44-111)||(403-470)
[»] scaffold0623 (1 HSPs)
scaffold0623 (36-111)||(5926-6001)
[»] scaffold0136 (1 HSPs)
scaffold0136 (36-114)||(3776-3854)
[»] scaffold0279 (1 HSPs)
scaffold0279 (36-81)||(17840-17885)
[»] scaffold0050 (1 HSPs)
scaffold0050 (44-89)||(70329-70374)
[»] scaffold0004 (1 HSPs)
scaffold0004 (46-111)||(92875-92940)
[»] scaffold0793 (1 HSPs)
scaffold0793 (56-112)||(4821-4877)
[»] scaffold0512 (1 HSPs)
scaffold0512 (44-112)||(4976-5044)
[»] scaffold0057 (1 HSPs)
scaffold0057 (36-113)||(24078-24156)
[»] scaffold0697 (1 HSPs)
scaffold0697 (44-82)||(1695-1733)
[»] scaffold0475 (1 HSPs)
scaffold0475 (47-113)||(3362-3428)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-112)||(135263-135313)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-110)||(263303-263377)
[»] scaffold0086 (1 HSPs)
scaffold0086 (36-112)||(2982-3058)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 31786547 - 31786444
Alignment:
Q  116 ataacaaattttctcatatattattactcattcttctgtcgatttaaaattctttttacaatatattaagaataagaaaaatatgtagaccaattttttg 215  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  31786547 ataacaaattt-ctcatatattattactcattcttctgtcaatttaaaattctttttataatatattaagaataagaaaaatatgtagatcaattttttg 31786449  T
Q  216 gactg 220  Q
     ||||    
T  31786448 aactg 31786444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 8365538 - 8365447
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||||||||||||||     || ||||| ||||||||||||||||||| ||||||||||||||  |||||| ||| |||||||||||    
T  8365538 aattacaagtgtcggtgtcgtgtcg-----gtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatagg 8365447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 10339122 - 10339053
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||  |||||||||| |||||||||||    
T  10339122 tcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagg 10339053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 4877994 - 4878062
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  4877994 tcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatagg 4878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 3209423 - 3209518
Alignment:
Q  18 attacaagtgtcggtgtcg-tgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||| |||||| || |||||| | |||||||| |||||||||  ||||||||||||||  ||||||||   ||||||||||    
T  3209423 attacaagtgtcggtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 16766737 - 16766827
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||     |||||||| || |||||||||||||||  ||||||||||||||  | || ||||| ||||||||||    
T  16766737 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 21068131 - 21068084
Alignment:
Q  53 gatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  21068131 gatacgacatgtgtccgacactgggacacgcctaatctaaggagtgtc 21068084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 17327655 - 17327589
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| |||||||||||| |||||  ||||||||||||||  |||||||||| |||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatagg 17327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 17841596 - 17841530
Alignment:
Q  45 cggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||||||| |||||| ||||||||||||  |||||||||||||  |||||||||| |||||||||    
T  17841596 cggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 10294161 - 10294238
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| | ||||||||| |||||| |||||||| ||||||||||  ||||||| |||||||||  |||||||||||    
T  10294161 gtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcatagg 10294238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 18367890 - 18367967
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| |||||||| || ||||||| |||| |||||  |||||||||| ||| ||||||||||| |||||||||||    
T  18367890 gtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagg 18367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 32978907 - 32978842
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttca 109  Q
    ||||||||||| ||||||| ||||||||||  ||||||| |||||| ||||||||||| |||||||    
T  32978907 tcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 21044870 - 21044826
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    |||||| |||||||||||| |||||||||||||||||||||||||    
T  21044870 acgacatgtgtccgacactgggacacgcctaatctaaggagtgtc 21044826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 28152149 - 28152217
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||  ||||| ||||||||  |||||||| | ||||||||||    
T  28152149 tcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||| ||| ||||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 34595185 - 34595253
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||||||||||| |||||  |||||| |||||||  |||||||||| ||||||||||    
T  34595185 tcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 9522931 - 9523021
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||| ||||||     ||||||||| |||||||||||||||||   ||||||||||||| ||  ||  ||||||||||||||    
T  9522931 aattacaagtgtcggtgttgtgtcg-----gtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaaatagcatccatgcttcatag 9523021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 9629448 - 9629513
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || ||| ||||||||||||  |||||| ||||||  |||||||||||||||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 16488595 - 16488519
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| |||||||||||| | |||  |||||||||| ||| ||||| ||| | ||||||||||    
T  16488595 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 9107389 - 9107299
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||     |||||||| || ||  |||||||||||  |||||| |||||||  ||||||| || ||||||||||    
T  9107389 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 21090678 - 21090632
Alignment:
Q  54 atacgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  21090678 atacgacatgtgtctgacactgggatacgcctaatctaaggagtgtc 21090632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 426514 - 426477
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatagg 426477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 853867 - 853811
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactag-gacacgcctaatctaaggagtgtc 100  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||| || |||||||    
T  853867 tcggtgtcggatacgacatgtgtccgaca-tagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 8776964 - 8776907
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||||||   ||||| |||||||  |||||||||| |||||||||||    
T  8776964 acgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatagg 8776907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 10649371 - 10649408
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatagg 10649408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 28715346 - 28715415
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||||   || ||||| | |||||||||||    
T  28715346 tcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatagg 28715415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||  |||||||||||||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 5970113 - 5970037
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| ||||||| | |||||||   ||||||||| ||||  ||||||| | |||||||||||    
T  5970113 gtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcatag 5970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 7378030 - 7378098
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||||| |  ||||||||  ||||||| ||||||| || ||||||| ||||||||||    
T  7378030 tcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 8714034 - 8714110
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| ||||||| | |||||||   ||||||||| ||||  |||||||||  ||||||||||    
T  8714034 gtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 17435265 - 17435329
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| ||||||| ||||||| ||||||| |  ||||||| | ||||||||    
T  17435265 tgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 24645532 - 24645600
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || |||||||||||||||||| | |||||| ||||||  | |||||||  ||||||||||    
T  24645532 tcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 34451048 - 34450961
Alignment:
Q  25 gtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||  |||||||||| ||| ||||||||||| ||||||||||    
T  34451048 gtgtcggtgtcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 22652016 - 22652106
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||     |||||||| |||||| |||||||||||  ||||||| ||||||  |||||||||| ||||||||||    
T  22652016 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 29510323 - 29510232
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||||||| ||||||     |||||||| ||||| ||||||||||||  |||||| |||||||  |||||||||| |||||||||||    
T  29510323 aattacaagtgtcggtgtagtgtcg-----gtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 29510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 31557047 - 31557115
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || ||||||| |||||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 29447126 - 29447040
Alignment:
Q  20 tacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||||||||||||| ||     ||||||||||| |||||| ||||| ||||| |||||||||||||||  |||||||||| |||||||||    
T  29447126 tacaagtgtcggtgtcatg-----tcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 18407777 - 18407839
Alignment:
Q  51 cggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||| ||||||| |||||||||||||||||||||||||   |||||||||| |||||||||||    
T  18407777 cggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatagg 18407839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 36450760 - 36450694
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||  |||||||||  ||||||||||    
T  36450760 ggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 5813643 - 5813712
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||   |||||||||| |||||| ||||    
T  5813643 tcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtagg 5813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 21465466 - 21465542
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| || |||||||| ||||||||||||| ||||  ||| ||||||||| | |||||||||| ||||||||||    
T  21465466 gtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 26902180 - 26902104
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||  |||||||| |||||||||||| | |||  |||||||||| |||| |||||||||| ||||||||||    
T  26902180 gtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 12570509 - 12570438
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||||| | || ||||| ||||| ||||    
T  12570509 gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 12570735 - 12570664
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||||| | || ||||| ||||| ||||    
T  12570735 gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 8343381 - 8343450
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagggga 116  Q
    ||||| || ||||||||||||||||||  ||||||||||||||  | |||||||  ||||||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagggga 8343450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3951544 - 3951476
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || |||||||||||| |||||  | |||||||||||| ||||||| ||| ||||||||||    
T  3951544 tcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 15816134 - 15816058
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| | ||||||||| ||||||||  ||||||||  ||||||||||||||  || ||||||| ||||||||||    
T  15816134 gtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 29447498 - 29447574
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| |||||||| || |||||| |||||||||||  ||||| | ||||||  |||||||||| ||||||||||    
T  29447498 gtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 3025605 - 3025668
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||| |||||||||||| ||||||  |||||| ||||||  |||||||||| ||||||||    
T  3025605 gtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 43737819 - 43737752
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| |||||| ||||| |||||  ||| |||||| ||| ||||||||||| |||||||||    
T  43737819 tcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 11803323 - 11803389
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| ||||||||||| ||||||||||  | ||||| ||||||  |||||||||| ||||||||||    
T  11803323 ggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 15023261 - 15023199
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||||||||||||||  || | ||||| ||||||  ||||||||||||| |||||    
T  15023261 tgtcggatacgacacgtgtccgatgctggaacacgtctaatccgaggagtgtccatgattcat 15023199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 17468527 - 17468485
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacga 59  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||    
T  17468527 aattacaagtgttggtgtcgtgtcgtgtcggtgtcggacacga 17468485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 22197736 - 22197670
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| | ||||||||||||||||  |  |||||||||||| |||||||||| ||||| |||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttatagg 22197670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 6065650 - 6065586
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||| ||||||||||  | |||||| ||||  ||||||||||| ||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 14134762 - 14134818
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||| ||| ||||||||||||||   |||||||||| || |||||||    
T  14134762 acgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 22943345 - 22943301
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    ||||||||||||||||||  ||||||||||||||  |||||||||    
T  22943345 acgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 33405392 - 33405324
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||| |||| |||||  ||||||| |||||| || |||||||| |||| |||||    
T  33405392 tcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 34260426 - 34260390
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  34260426 ggacacgcctaatctaatgagtgtctatgcttcatag 34260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 41831951 - 41831875
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| | ||||||||| |||| |||| |||||||  |||||||| |||||   |||||||||||| ||||||||    
T  41831951 gtgtcgtgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattcgaggagtgtccattcttcatag 41831875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 44067596 - 44067644
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||| ||||||||||||||   |||||||||| ||||||||    
T  44067596 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 41961669 - 41961578
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||||||||||||||     || ||||| ||||||||||||||||||| ||||||||||||||  || ||||||| |||||||||||    
T  41961669 aattacaagtgtcggtgtcgtgtcg-----gtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagg 41961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 40993343 - 40993274
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||| ||||||||||  ||||||||||||||  ||||||||||||||||||||||    
T  40993343 tcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatagg 40993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 28918066 - 28918120
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  28918066 acgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 18427000 - 18427068
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||| |||  |||||| |||||||| |||||||||| || |||||||    
T  18427000 tcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 55401126 - 55401194
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||  |||||||||| ||||||||||    
T  55401126 tcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 5407253 - 5407198
Alignment:
Q  58 gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||| | ||||||||||||||| || ||||||||||||||||||||    
T  5407253 gacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcatagg 5407198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 7171554 - 7171621
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||| ||||||||||||||||||   ||||||||||||| |||||||||  ||||||||||||    
T  7171554 ggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatagg 7171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 10955003 - 10955048
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatc 89  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  10955003 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 10955048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 16000006 - 15999951
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| ||| |||||    
T  16000006 acgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 34185142 - 34185052
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||||||||       ||||||| | |||| |||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  34185142 aattacaagtgtcggtgtcgtgtcca-----tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 4987288 - 4987222
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||| ||| ||||||||||||||||||  ||||||||||||||  |||||||||| | ||||||    
T  4987288 tcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 14209167 - 14209244
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| ||||||||||| ||||||||||| |||||   ||| || ||||||| ||| ||||||| |||||||||||    
T  14209167 gtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatagg 14209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 14216932 - 14217021
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||||| |||||||||  ||   |||||||| ||||||||||| ||||||| |||||| |||||||  || ||||||| |||||||||    
T  14216932 aattacaagtgtccgtgtcgtgt--ta---gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 14223061 - 14223150
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||||| |||||||||  ||   |||||||| ||||||||||| ||||||| |||||| |||||||  || ||||||| |||||||||    
T  14223061 aattacaagtgtccgtgtcgtgt--ta---gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 27505305 - 27505370
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| || ||||||||||||||||||  ||||| ||||||||  |||||||||| ||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  63 gtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| |||||| |||||||| ||||||||||| |||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 13845533 - 13845465
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||| ||||||| |||||   ||||||||| ||| ||||||||||| ||||||||||    
T  13845533 tcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 14832153 - 14832205
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaat 88  Q
    ||||||| ||||| ||||| ||||||||||||||||||  |||||||||||||    
T  14832153 gtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 20503516 - 20503584
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||| ||||||| |||| |||||  ||||||||||||||  |||||||||| ||||||||||    
T  20503516 tcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 2408640 - 2408590
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| ||||||  |||||||||||||||||||||| ||| ||||||||||    
T  2408640 cgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 3631738 - 3631792
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtcc 101  Q
    |||||||| ||||||| |||||||||| |||||||||||| ||  ||||||||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtcc 3631792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||   ||||||||||||||| |||||||||| ||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 51512167 - 51512118
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||| ||||| ||||||||||||| |||||||||||||  ||||||||    
T  51512167 cgtgtctgacaccaggacacgcctaacctaaggagtgtccgcgcttcata 51512118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 15796299 - 15796223
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| | ||||||||| || |||||||||| ||||  | |||||||||||| || |||||| | ||||||||||    
T  15796299 gtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 24205031 - 24204983
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||| ||||||||||||||   |||||||||| ||||||||    
T  24205031 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 25775576 - 25775624
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||| |||||||||||||||  |||||||| | ||||||||    
T  25775576 cgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 26492216 - 26492144
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||| ||||||| |||| ||||| | |||||| ||||||  |||| |||||  ||||||||||    
T  26492216 gtatcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcatagg 26492144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 35222989 - 35223057
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| | |||||||||| |||||  |||||||| | |||  |||||||||| ||||||||||    
T  35222989 tcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 40052380 - 40052432
Alignment:
Q  61 acgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||  ||||||||||||||  |||||||| | |||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatagg 40052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 26769551 - 26769641
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||| |||||     || ||||| ||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  26769551 aattacaagtgtcggtgtcatgtcg-----gtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 30717549 - 30717459
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||| |||||||||||     ||||||| ||||||||||| ||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  30717549 aattacaagtgtcgatgtcgtgtcgt-----tgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 35056922 - 35056998
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| ||||||||||||||||||    ||||||||||||| |||||||||| ||||||||||    
T  35056922 gtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 28596520 - 28596587
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||  |||||||||| |||||||||    
T  28596520 tcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 37419797 - 37419874
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| ||||||||||| ||||  ||||||||||||  ||||||||||||||  |||||||||| |||||||||||    
T  37419797 gtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 37419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 24009346 - 24009414
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||||||||||| |||||  |||||||||| ||| ||||||||||| ||||||||||    
T  24009346 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 12224274 - 12224329
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgt 99  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||| |||||||||    
T  12224274 tcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 2438727 - 2438661
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| ||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||||    
T  2438727 tcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 32749830 - 32749754
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||| |||||||   |||| |||||||||||| |||||||||| |||||||||||||||  |||||||||    
T  32749830 gtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 11223882 - 11223793
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||| ||| |     |||||||| ||||||| |||| |||||  ||||||||||||||| |||||||||| ||||||||||    
T  11223882 aattacaagtgtcggtgtcatgtag-----gtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 19942316 - 19942382
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| ||| || ||||| |||||  ||||||||||||||  |||||||||||||||||||    
T  19942316 tcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 34993987 - 34993921
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||| | |||||| |||||||||||| |||||||||||||  ||||||||| | |||||||||||    
T  34993987 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 38117165 - 38117099
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||| || |||||||||||||||  ||||||||||||||  ||| |||||| ||||||||||    
T  38117165 ggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || |||||||||||||||  ||||||| ||||||  |||||||||| ||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 27084320 - 27084388
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||| ||||   |||||||||||||  |||||||||  ||||||||||    
T  27084320 tcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 36096380 - 36096304
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||| ||||||| |||||||||||| |||||  |||||||||| | | || |||||||| ||||||||||    
T  36096380 gtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 21782827 - 21782744
Alignment:
Q  29 cggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| || | |||||| |  ||||||||||||| ||||  ||||||| |||||||  ||||||||| ||||||||||    
T  21782827 cggtgtcgtgttgtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 15657930 - 15657992
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||  ||||||||||||||| |  ||||||||||| ||  |||||||||||||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 15972924 - 15972994
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggg 114  Q
    ||||||||||| |||||||||||||||| |  |||||| |||||||  | || ||||| ||||||||||||    
T  15972924 tcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcataggg 15972994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 5040785 - 5040842
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtcc 101  Q
    ||||||||||| |||||| ||||||||| |  ||||||||||| || |||||||||||    
T  5040785 tcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtcc 5040842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 19536397 - 19536360
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatagg 19536360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 20242735 - 20242666
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| || ||||||||| ||||| ||||||||||| |||  | |||||||  |||||||||||    
T  20242735 tcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatagg 20242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 3414984 - 3414928
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||| | ||||||  |||||||||||||||||  ||||| ||||||||||||    
T  3414984 acgacacgtatacgacaccgggacacgcctaatctaataagtgttcatgcttcatag 3414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 37559028 - 37559096
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||   ||||||||||||||||  | |||||| |||||  |||||||||| ||||||||||    
T  37559028 tcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 37598882 - 37598952
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggg 114  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||  |||||||||| ||||||||||||    
T  37598882 tcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcataggg 37598952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 32461461 - 32461393
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||| ||| ||||||| ||||||||||    
T  32461461 tcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 40258941 - 40258874
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||||| || ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||    
T  40258941 tcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 6427518 - 6427595
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| | || |||||| ||||||||||||||||||  ||||||||||||||| | |||||||| |||||||||||    
T  6427518 gtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 40917803 - 40917880
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| ||||||| ||| ||||||||||||||||||  ||||||||||||||  |||| ||||| |||||||||||    
T  40917803 gtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatagg 40917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 6612190 - 6612112
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    |||||||||||||||||||||||||      ||||||| |||| | ||||||||||| ||||||||||||||| ||||||||||    
T  6612190 aattacaagtgtcggtgtcgtgtcga-----tgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 47989537 - 47989627
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||     |||||||| ||||||| |||| ||||   ||||||||||||||  |||||||||| ||||||||||    
T  47989537 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 25934673 - 25934747
Alignment:
Q  39 tcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||| ||||||||||| |||||||||||| |||||  ||| |||||| ||| ||||||||||| |||||||||||    
T  25934673 tcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatagg 25934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 9828098 - 9828175
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| || ||||| || ||||||||||||||||||  ||||||| ||||||  |||||||||| |||||||||||    
T  9828098 gtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagg 9828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 31694729 - 31694637
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggg 114  Q
    |||||||||||||||||||||||||     |||||||| || |||| | | ||||||  | ||||||||||||| |||||||||| ||||||||||||    
T  31694729 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcataggg 31694637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||| |||||  ||||||||||| |||||||||||||||  |||||||||| ||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 18337380 - 18337448
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| || |||||||||||||||| ||||| |||| |||  |||||||||| ||||||||||    
T  18337380 tcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 1486709 - 1486646
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||| ||||||||||||||||||  ||||||||||||||  |||||||||  ||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 1704986 - 1704935
Alignment:
Q  61 acgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||   ||||||||||||| ||||||||||||||||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcatag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 17831517 - 17831462
Alignment:
Q  57 cgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| |||||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  17831517 cgacatgtgtccgacaccgggacacgcctaatcttaggagtgtccatgtttcatag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 1815308 - 1815377
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| || ||||||| ||||||||||  ||||||||||||||| ||||||| || || ||||||||    
T  1815308 tcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 51410076 - 51410145
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||||| ||||||||   ||||||||||||| ||||||| | | |||||||||||    
T  51410076 tcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatagg 51410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 18556461 - 18556385
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||  ||||||| ||  |||||||| ||||||||| ||||||||||||||  || ||||||| ||||||||||    
T  18556461 gtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 22515895 - 22515827
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||| | ||||||||   |||||||||||||  |||||||||| ||||||||||    
T  22515895 tcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 46348391 - 46348323
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||   ||||||||| |||  ||| |||||| ||||||||||    
T  46348391 tcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 27471571 - 27471524
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgc 83  Q
    ||||| ||||||||| ||||||||||||||||||||||  ||||||||    
T  27471571 gtgtcatatcggtgttggatacgacacgtgtccgacaccgggacacgc 27471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 21530740 - 21530778
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacg 82  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  21530740 tcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 34712377 - 34712323
Alignment:
Q  58 gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||| ||||||| |||||  ||||||||||| ||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 42359457 - 42359391
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| | |||  |||||||||||  ||||||||||||||  |||||||||| ||||||||    
T  42359457 tcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 48415720 - 48415667
Alignment:
Q  57 cgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||| |||||||||    
T  48415720 cgacacgtgttggacac-aggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 5898274 - 5898205
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| || ||||||||||||| ||||  ||||||| ||||||  |||||||||| ||||| |||||    
T  5898274 tcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatagg 5898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  67 ccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| |||||||||||||| |||||||| || ||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 19562620 - 19562567
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    ||||||||||| |||||||||||||||  |||||| |||||||  |||||||||    
T  19562620 gtgtcggatacaacacgtgtccgacacagggacacacctaatccgaggagtgtc 19562567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 39130775 - 39130706
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| || |||||||  ||||| | |||||||| ||||| || ||||||||||||||| ||||    
T  39130775 tcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgcttcgtagg 39130706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 40181919 - 40181976
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtg 98  Q
    |||||||||||||| || |||||||||| ||||  ||||||||||||||  |||||||    
T  40181919 gtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 10233326 - 10233374
Alignment:
Q  63 gtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| ||||||| |||||||  |||||||||| |||||||||    
T  10233326 gtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 10577736 - 10577676
Alignment:
Q  51 cggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||| ||||| |||||| |||||  |||||||||| ||| ||||||||||| |||||||||    
T  10577736 cggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 16812639 - 16812675
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  16812639 ggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 27965976 - 27965940
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||  |||||||||||||||||||||    
T  27965976 ggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 38078669 - 38078601
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||| ||| | |||| |||||||||||||||  |||||| | | ||||||||||    
T  38078669 tcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 16073445 - 16073514
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| |||| || |||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  16073445 tcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatagg 16073514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 23292994 - 23292926
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  23292994 tcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 30982883 - 30982808
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||| |||||||| || ||||||||||||||||||  |||||||||||||| || |||||||| |||||||||    
T  30982883 gtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 28964253 - 28964188
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| ||||||| | ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  28964253 gtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 16184863 - 16184951
Alignment:
Q  25 gtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||| |||||||||||| ||||||||| ||||||  | ||||||||||| ||||||||||||||  ||||||||   |||||||||||    
T  16184863 gtgtctgtgtcgtgtcgtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatagg 16184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 19482722 - 19482810
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggggataacaaat 124  Q
    ||||||| ||||| | ||| ||||||||||||||||||| |||||| |||||||  |||||||| | ||||||||||| | ||||||||    
T  19482722 gtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggtgttaacaaat 19482810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 18513224 - 18513174
Alignment:
Q  63 gtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatagg 18513174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  61 acgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 24613717 - 24613629
Alignment:
Q  20 tacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||||| ||     |||||||| || |||||||||||| ||||| |||||||| ||||||  |||||||||| |||||||||||    
T  24613717 tacaagtgtcggtgtcatg-----tcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatagg 24613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 5414177 - 5414101
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| || |||||||| |||||||||||| |||||  |||||| ||| ||| ||||||||||| ||||||||||    
T  5414177 gtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||| || ||||||||||| ||||||| ||||||| ||||||| |||||||||| |||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 34306812 - 34306744
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| |||| ||| | ||||||||||    
T  34306812 tcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 49431077 - 49431145
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||| ||||  |||||||||| |||  |||||||||||||||| ||||    
T  49431077 tcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  58 gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttca 109  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| |||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 19312389 - 19312463
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||| ||| ||||||||||||||||||||||||||   |||||| ||||||| || ||||||| || |||||    
T  19312389 gtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 903979 - 904052
Alignment:
Q  39 tcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||| ||| |||||| |||||||||||| ||||||  |||||| ||| | ||||| ||||||||||    
T  903979 tcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgcttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 18966575 - 18966628
Alignment:
Q  59 acacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||   ||| |||||||||||||||||||||| ||||||||||    
T  18966575 acacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 22234895 - 22234818
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| |||||||| || |||||||||||||||||| |||||||  ||||||  || ||||| | |||||||||||    
T  22234895 gtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatagg 22234818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 24343555 - 24343632
Alignment:
Q  36 gtgtcgtatcggtgtcggatac-gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| |||||||| || || ||| ||||||||||||  ||||||||||| ||| |||||||||| ||||||||||    
T  24343555 gtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 715601 - 715545
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  715601 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 752927 - 752871
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  752927 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 29205531 - 29205587
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||| | ||||||||||    
T  29205531 acgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  64 tgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 7424724 - 7424774
Alignment:
Q  59 acacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||||||||    
T  7424724 acacgtgtccgacacc-gtacacgcctaatccaaggagtgtccatgcttcat 7424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 30838264 - 30838335
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgctt 107  Q
    ||||||| || ||||||||  ||||||||||||||||| | ||||||||||| |  |||||||||| |||||    
T  30838264 gtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 4672093 - 4672023
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggg 114  Q
    |||||||||||||| | |||||| ||||||| | ||| | |||||| ||||||||||  ||||||||||||    
T  4672093 tcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcataggg 4672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 42640589 - 42640643
Alignment:
Q  58 gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||| ||| |||||||||||||||  |||||| ||| ||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 3064924 - 3064867
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| |||||||| ||  |||||||||||||  |||||||||| |||||||||||    
T  3064924 acgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatagg 3064867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 11596333 - 11596296
Alignment:
Q  76 ggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  11596333 ggacacgcctaatctgaggagtgtccgtgcttcatagg 11596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 17876237 - 17876286
Alignment:
Q  64 tgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||| ||||||| ||||||| ||||||||||  |||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatagg 17876286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 38847017 - 38846968
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggag 96  Q
    ||||||||||||||||||||||||||| || |||  |||||||| |||||    
T  38847017 gtgtcggatacgacacgtgtccgacaccagaacatacctaatctgaggag 38846968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 2361983 - 2361915
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||| |||||| |||||   ||||| |||||||| | |||||||| ||||||||||    
T  2361983 tcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 8423726 - 8423658
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||  ||||||||||  ||||||||||||||  || ||||||| ||| ||||||    
T  8423726 tcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 12895282 - 12895214
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| |||||| || |||||||   ||||||||||||||  |||||||| | ||||||||||    
T  12895282 tcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 40965341 - 40965389
Alignment:
Q  63 gtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| | |||||||||||||| |||||||||  |||||||||    
T  40965341 gtgtccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 46083996 - 46083920
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| || || ||||| |||||||||||| ||| |  |||||||||| ||   |||||||||||||||||||||    
T  46083996 gtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgcttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 53381605 - 53381529
Alignment:
Q  38 gtcgtatcggtgtcggatac-gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||| ||||||||||| || ||| ||| ||||||||  |||||| |||||||  |||||||||| |||||||||||    
T  53381605 gtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 53381529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 32766948 - 32766872
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||| | |||||||||||||||||| |||| ||| ||||||| |||||||||| ||||||||||    
T  32766948 gtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 42893411 - 42893479
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || || ||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  42893411 tcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 21542070 - 21542159
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    |||||||||||||||||||||||||     |||||||| ||||||||||||||||||  ||||||||| |||| ||||| ||||| ||| |||||    
T  21542070 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 21522804 - 21522880
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| |||||||||||||| |||  |||||||||||||| || |||||||| ||| ||||||    
T  21522804 gtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 21533370 - 21533446
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| |||||||||||||| |||  |||||||||||||| || |||||||| ||| ||||||    
T  21533370 gtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 21576749 - 21576685
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| |||||||||||| |||||| ||||||||||||||  |||||||||| ||||||||||    
T  21576749 tgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 31084382 - 31084447
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||  |||||||||| || |||||||    
T  31084382 gtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 39268606 - 39268541
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttca 109  Q
    ||||||| ||| |||||| |||||||||||| ||||||||||||||  |||||||||| |||||||    
T  39268606 tcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 30099046 - 30098982
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttc 108  Q
    |||||||||||||||||||||||| |||||  |||||||||| ||| ||||||||| | ||||||    
T  30099046 tcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 39698595 - 39698671
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| |||||| || ||||||||   |||||||||||||  |||||||||| ||||||||||    
T  39698595 gtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 6401552 - 6401627
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||| || |||||||| |||||||||||| |||||  ||| |||||| ||| ||||||||||| |||||||||    
T  6401552 gtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 21191064 - 21190998
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| || ||||||||||||| |  ||||||||||||||  |||||||||| ||||||||    
T  21191064 tcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 30502396 - 30502330
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| ||||||| ||||||||||| ||||| |||||||| ||||| ||| | ||||||||    
T  30502396 tcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 30542739 - 30542673
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| ||||||| ||||||||||| ||||| |||||||| ||||| ||| | ||||||||    
T  30542739 tcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 32630740 - 32630674
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||||||||||||||||||| |  ||||| ||||||   ||||||||| ||||||||||||    
T  32630740 gtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcatagg 32630674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 28588682 - 28588613
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||| | || ||||| ||||||||| |||||  | ||||||||||||||||||||    
T  28588682 tcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatagg 28588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 30098391 - 30098456
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| |||||||||||| ||||| ||||||| |||||||  |||| ||||| ||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 43564932 - 43565001
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| |||||| ||||||||| |  ||||||||||||||  || ||||||| |||||||||||    
T  43564932 tcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatagg 43565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 21814315 - 21814391
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||| |||||||||||| | |||  |||||||||| ||| ||||| ||| | ||||||||||    
T  21814315 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 27932288 - 27932355
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||   ||||||||   |||||||||||    
T  27932288 ggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 30183589 - 30183655
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaat 88  Q
    ||||||||||||||||||||||| |     || || || ||||||||||||||||||| |||||||||||||    
T  30183589 aattacaagtgtcggtgtcgtgttg-----gtatcagacacgacacgtgtccgacactgggacacgcctaat 30183655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    |||||||| ||||||||||||  ||||  ||||||||||||||  |||||||||| ||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 14873588 - 14873642
Alignment:
Q  59 acacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||||| ||||  ||||||||||||||  |||||||||| |||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 26312817 - 26312875
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgt 99  Q
    |||||||||||||| |||| ||||||| ||||| ||||||| |||||||  ||||||||    
T  26312817 gtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 11686000 - 11686069
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||||||||| | || | | |||| ||||||  |||||||||| |||||||||||    
T  11686000 tcggtgtcggacacgacacgtgtccaaaaccaaggcacggctaatcggaggagtgtccgtgcttcatagg 11686069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 7677759 - 7677835
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| |||||||| || ||| ||| ||||||||||  ||||||||||||||  ||||| |||  ||||||||||    
T  7677759 gtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 15382536 - 15382592
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtc 100  Q
    ||||||| ||| ||||||| ||||||||||  ||||||||||||||  |||||||||    
T  15382536 tcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 17123099 - 17123166
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||| |||| || ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  17123099 tcggtgttggacacgaaacatgtccgacacg-ggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  64 tgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 23015986 - 23015926
Alignment:
Q  50 tcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||| |||||| |||||||||| | ||||||||||||||  ||||||||||  |||||||    
T  23015986 tcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 24339682 - 24339772
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||||||     |||||||| ||||||||| ||||||||  ||||||||||||||  ||||||| || ||||||||||    
T  24339682 aattacaagtgtcggtgtcgtgtcg-----gtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 5409836 - 5409770
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| ||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 5409770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 9778559 - 9778625
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| || |||||||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatagg 9778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 7438746 - 7438837
Alignment:
Q  17 aattacaagtgtcggtgtcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||||||| |||||     |||||  | ||||||| ||| |||||||||||||||||||||  ||||||||||| |||||||||||    
T  7438746 aattacaagtgtcggtgtcatgtcg-----gtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatagg 7438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 21880203 - 21880271
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||  || ||||||| ||||||||||    
T  21880203 tcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 25822709 - 25822785
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||| ||||| |||||||||||| ||||   ||||| |||||||||||||||||||| || |||||||    
T  25822709 gtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 598259 - 598327
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||  || ||||||| ||||||||||    
T  598259 tcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 29763185 - 29763129
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||  |||||||||||||||  |||||||||| ||||||||||    
T  29763185 acgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 1401073 - 1401143
Alignment:
Q  41 gtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| || ||||||  |||||||||   |||||| |||||||| ||||||||||||||||||||||    
T  1401073 gtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 1433513 - 1433578
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| | |||| ||||||||||| |||||||| ||||||  |||||||||| ||||||||||    
T  1433513 gtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 7133281 - 7133212
Alignment:
Q  44 tcggtgtcggatac-gacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| || ||| ||||||||||||| |||||| |||||||| ||||| |||| ||||||||||    
T  7133281 tcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 15680860 - 15680929
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||| ||||||||||||||||||   |||||| |||||   |||||||||| |||||||||||    
T  15680860 tcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 43027469 - 43027404
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| || ||||||||||||||||||  ||||||||||||||  | |||||||| ||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 5307331 - 5307375
Alignment:
Q  68 cgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||    
T  5307331 cgacactaggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 32287471 - 32287404
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| | |||| |||||||||||  |||||| |||||||  |||||||||| |||||||||    
T  32287471 tcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 11831484 - 11831562
Alignment:
Q  34 tcgtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||||||||||||| |||||| ||||  |||||  |  ||||||||||| ||| | ||| ||||||||||||    
T  11831484 tcgtgtcgtatcggtgtcggacacgacatgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatag 11831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  47 gtgtcggatacgacacgtgtccgaca-ctaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| ||||||||||||||||| |  ||||||||||||||  |||||||| | ||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 15836488 - 15836439
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagt 97  Q
    ||||||| ||||||| | |||| ||| |||||||||||||||||||||||    
T  15836488 tgtcggacacgacacatatccggcaccaggacacgcctaatctaaggagt 15836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 21138996 - 21138931
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||| | || ||||||||||||| ||||||||| ||||| | ||||||| | ||||||||||    
T  21138996 gtgtcggacatgatacgtgtccgacaccaggacacgcttaatcaagggagtgttcgtgcttcatag 21138931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 28155624 - 28155673
Alignment:
Q  63 gtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||| ||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 21864863 - 21864927
Alignment:
Q  48 tgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||||||||||  ||||||| |||||   |||||||||  ||||||||||    
T  21864863 tgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 27229296 - 27229244
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttc 108  Q
    |||| |||||| |||||||||||||||||||||   |||| ||||||||||||    
T  27229296 acgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgcttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 35862027 - 35862071
Alignment:
Q  69 gacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||| |||||||||||||||  |||||||||| |||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcatagg 35862071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 13457 - 13523
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||||||| ||||||||    
T  13457 tcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 21870 - 21804
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||||||| ||||||||    
T  21870 tcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 8664 - 8721
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||    
T  8664 acgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatagg 8721  T

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Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 8849 - 8917
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| |||||| ||| ||||||||||    
T  8849 tcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 241648 - 241724
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||||||||||||  || ||||||| ||||||||||    
T  241648 gtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 14580 - 14646
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||| ||||||||||||||||||   ||||||||||||| ||||||||| | ||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 71779 - 71856
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| ||||||||||| || |||||||||||||||  ||||||| ||||||  |||||||||  |||||||||||    
T  71779 gtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatagg 71856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 8640 - 8564
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||| ||||| |||| |||||||||||||| | |||||||||||   |||||||||| ||||||||||    
T  8640 gtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 470 - 403
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||| ||||| ||||||||||||  |||||| |||||||  |||||||||| |||||||||    
T  470 tcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 6001 - 5926
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||||||||||| | |||||||||||| |||||   ||||||||| ||| ||||||||||| ||| |||||    
T  6001 gtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 3854 - 3776
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcataggg 114  Q
    ||||||| | ||||||||| ||||||| |||||||||    |||||||||||||  |||||||||| ||||||||||||    
T  3854 gtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcataggg 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 17885 - 17840
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacac 81  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  17885 gtgtcgtatcggtgttggacacgacacgtgtccgacactgggacac 17840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 70329 - 70374
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatc 89  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||    
T  70329 tcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatc 70374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 92875 - 92940
Alignment:
Q  46 ggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcata 111  Q
    ||||||||| ||||||| |||| |||||  ||||||||||||||  |||||||||| |||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 4877 - 4821
Alignment:
Q  56 acgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||||||    
T  4877 acgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 5044 - 4976
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||||||| ||||||||||||||||| |  |||| ||||||||  |||||||||  ||||||||||    
T  5044 tcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 24078 - 24156
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgt--ccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    ||||||| ||||||||||| || ||||||||  |||||||| ||||||||||||||  | |||||||| |||||||||||    
T  24078 gtgtcgtgtcggtgtcggacacaacacgtgtgtccgacact-ggacacgcctaatccgatgagtgtccgtgcttcatagg 24156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 1695 - 1733
Alignment:
Q  44 tcggtgtcggatacgacacgtgtccgacactaggacacg 82  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  1695 tcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 3362 - 3428
Alignment:
Q  47 gtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatagg 113  Q
    |||||||| | ||||||||   |||||| ||||||||||||||  |||||||||| |||||||||||    
T  3362 gtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  62 cgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    |||||||||||| |||||||||||||||| ||| |||| | ||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 263377 - 263303
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcat 110  Q
    ||||||| |||||||| || ||||||||||| ||| || | |||||||||||||  |||||||||| || |||||    
T  263377 gtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 2982 - 3058
Alignment:
Q  36 gtgtcgtatcggtgtcggatacgacacgtgtccgacactaggacacgcctaatctaaggagtgtccatgcttcatag 112  Q
    ||||||| ||||| || || ||||||||||| ||||||  | ||||||||||||  |||||||||| |||| |||||    
T  2982 gtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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