View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7877_high_23 (Length: 241)

Name: NF7877_high_23
Description: NF7877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7877_high_23
NF7877_high_23
[»] chr4 (11 HSPs)
chr4 (1-223)||(5893510-5893732)
chr4 (149-214)||(1827843-1827908)
chr4 (149-214)||(15740992-15741057)
chr4 (149-214)||(23641894-23641959)
chr4 (149-214)||(23647552-23647617)
chr4 (149-214)||(29553104-29553169)
chr4 (149-213)||(47419576-47419640)
chr4 (149-221)||(55725003-55725075)
chr4 (149-214)||(48312866-48312931)
chr4 (149-214)||(54482463-54482528)
chr4 (158-214)||(42952834-42952890)
[»] chr2 (5 HSPs)
chr2 (91-143)||(21518438-21518490)
chr2 (149-214)||(14440516-14440581)
chr2 (154-210)||(25380701-25380757)
chr2 (149-214)||(8065564-8065629)
chr2 (154-214)||(28253506-28253566)
[»] scaffold1350 (1 HSPs)
scaffold1350 (149-214)||(316-381)
[»] chr5 (18 HSPs)
chr5 (149-214)||(8299485-8299550)
chr5 (149-214)||(10780973-10781038)
chr5 (149-214)||(23239155-23239220)
chr5 (149-214)||(28534979-28535044)
chr5 (149-214)||(30731617-30731682)
chr5 (158-214)||(26261621-26261677)
chr5 (154-214)||(42514497-42514557)
chr5 (157-214)||(22437998-22438055)
chr5 (149-214)||(25856742-25856807)
chr5 (149-214)||(27796256-27796321)
chr5 (169-214)||(29572173-29572218)
chr5 (169-214)||(29573550-29573595)
chr5 (169-214)||(29574927-29574972)
chr5 (169-214)||(29576304-29576349)
chr5 (169-214)||(29577681-29577726)
chr5 (169-214)||(29579058-29579103)
chr5 (158-214)||(19506779-19506835)
chr5 (158-214)||(35121991-35122047)
[»] chr6 (9 HSPs)
chr6 (154-214)||(17577020-17577080)
chr6 (154-214)||(13938495-13938555)
chr6 (149-214)||(2554377-2554442)
chr6 (181-214)||(2923634-2923667)
chr6 (149-214)||(14843440-14843505)
chr6 (149-214)||(17605637-17605702)
chr6 (149-214)||(21629425-21629490)
chr6 (149-214)||(24766717-24766782)
chr6 (154-214)||(26206110-26206170)
[»] chr3 (12 HSPs)
chr3 (158-214)||(52907345-52907401)
chr3 (149-214)||(962466-962531)
chr3 (149-214)||(2365050-2365115)
chr3 (149-214)||(19919532-19919597)
chr3 (154-214)||(17077600-17077660)
chr3 (154-214)||(36731670-36731730)
chr3 (155-214)||(23819343-23819402)
chr3 (149-214)||(12341558-12341623)
chr3 (149-214)||(34332118-34332183)
chr3 (149-214)||(43120977-43121042)
chr3 (169-214)||(46907973-46908018)
chr3 (154-214)||(16179717-16179777)
[»] chr8 (11 HSPs)
chr8 (149-207)||(20825071-20825129)
chr8 (149-214)||(17700252-17700317)
chr8 (154-214)||(7925163-7925223)
chr8 (154-214)||(9923378-9923438)
chr8 (154-214)||(13878790-13878850)
chr8 (149-213)||(26774551-26774615)
chr8 (164-214)||(29721214-29721264)
chr8 (149-214)||(8300575-8300640)
chr8 (149-214)||(23942859-23942924)
chr8 (158-214)||(24794501-24794557)
chr8 (158-214)||(36157935-36157991)
[»] scaffold0472 (1 HSPs)
scaffold0472 (149-214)||(4024-4089)
[»] scaffold0034 (1 HSPs)
scaffold0034 (149-214)||(105146-105211)
[»] chr7 (8 HSPs)
chr7 (149-214)||(4937431-4937496)
chr7 (149-214)||(11276551-11276616)
chr7 (149-214)||(17721407-17721472)
chr7 (149-214)||(29968746-29968811)
chr7 (169-221)||(2820017-2820069)
chr7 (157-207)||(4344630-4344680)
chr7 (149-214)||(19735290-19735355)
chr7 (149-214)||(31423366-31423431)
[»] chr1 (4 HSPs)
chr1 (149-214)||(6051375-6051440)
chr1 (149-214)||(35541806-35541871)
chr1 (149-214)||(3544404-3544469)
chr1 (158-214)||(20796441-20796497)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5893732 - 5893510
Alignment:
Q  1 caacaaaactatatggcaccaagaggaagaaacaaatgtcatcatcaaaaccatacgtnnnnnnnnnnnnnntaannnnnnnaatatgcgaaaatagaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||       ||||||| ||||||||||    
T  5893732 caacaaaactatatggcaccaagaggaagaaacaaatgtcatcatcaaaaccatacgtaaaaaagaaaaaaataatttttttaatatgcaaaaatagaat 5893633  T
Q  101 atattaacaccaacaatgtgatatttttagcacaagacgtaccccctgcaaacaaatttattcaacatagattcaagagaagagattatacttgacggaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5893632 atattaacaccaacaatgtgatatttttagcacaagacgtatccactgcaaacaaatttattcaacatagattcaagagaagagattatacttgacggaa 5893533  T
Q  201 ctttgaagaaggaacgaacatgg 223  Q
    |||||||||||||||||||||||    
T  5893532 ctttgaagaaggaacgaacatgg 5893510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 1827908 - 1827843
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  1827908 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 1827843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 15740992 - 15741057
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  15740992 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 15741057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 23641959 - 23641894
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  23641959 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 23641894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 23647617 - 23647552
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  23647617 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 23647552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 29553169 - 29553104
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| || | ||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  29553169 caaaaaaatttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaa 29553104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 47419576 - 47419640
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaagga 213  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| |||||||||||||    
T  47419576 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaagga 47419640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 55725075 - 55725003
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaacgaacat 221  Q
    |||| ||||||||| |||| ||||||||  |||||||||||||  |||||| ||||||| |||||| ||||||    
T  55725075 caaaaaaatttatttaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacat 55725003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 48312866 - 48312931
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  48312866 caaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 48312931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 54482528 - 54482463
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  54482528 caaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 54482463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 42952890 - 42952834
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaa 42952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 21518490 - 21518438
Alignment:
Q  91 aaaatagaatatattaacaccaacaatgtgatatttttagcacaagacgtacc 143  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21518490 aaaattgaatatattaacatcaacaatgtgatctttttagcacaagacgtacc 21518438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 14440516 - 14440581
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| |||||||| |||||||||||||| ||||||| |||| || ||||||    
T  14440516 caaaaaaatttatttaacaaagattcaatagaagagattatacctgacggagctttaaaaaaggaa 14440581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 25380757 - 25380701
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaa 210  Q
    |||||||||||| | |||||||| |||||||||||||| ||| ||| ||||||||||    
T  25380757 aaatttattcaataaagattcaatagaagagattatacctgatggagctttgaagaa 25380701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 8065629 - 8065564
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| |||||||| | ||||||||  ||||||||||||| ||| ||| ||||||||||||||    
T  8065629 caaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctttgaagaaggaa 8065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 28253506 - 28253566
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||| | |||| ||||||||  ||||||||||||| ||||| ||||||||| ||||||    
T  28253506 aaatttaattaacagagattcaatggaagagattatacctgacgaaactttgaaaaaggaa 28253566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 316 - 381
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||||||||||| ||||||| ||||||    
T  316 caaaaaaatttatttaacaaagattcaattgaagagattatacttgacggagctttgaaaaaggaa 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 8299550 - 8299485
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| |||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  8299550 caaaaaaatttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaa 8299485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 10780973 - 10781038
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| |||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  10780973 caaaaaaatttatttaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaa 10781038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23239155 - 23239220
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  23239155 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 23239220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 28535044 - 28534979
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  28535044 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 28534979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 30731682 - 30731617
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  30731682 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 30731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 26261677 - 26261621
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||| ||| |||||| |||||||||||||| ||| ||| ||||||||||||||    
T  26261677 ttattcaaaataaattcaatagaagagattatacctgaaggagctttgaagaaggaa 26261621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 42514497 - 42514557
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  42514497 aaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 42514557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 22437998 - 22438055
Alignment:
Q  157 tttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||| ||||||||||||| | |||||||||||| ||| ||| || |||||||||||    
T  22437998 tttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaa 22438055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 25856807 - 25856742
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||| || | |||||||||||| ||||||| ||||||| ||||||    
T  25856807 caaaaaaatttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaa 25856742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 27796256 - 27796321
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  27796256 caaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 27796321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29572218 - 29572173
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29572218 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29573595 - 29573550
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29573595 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29573550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29574972 - 29574927
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29574972 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29574927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29576349 - 29576304
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29576349 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29576304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29577726 - 29577681
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29577726 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 29579103 - 29579058
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||    
T  29579103 agattcaaaggaagagattatacttgacagagctttgaagaaggaa 29579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 19506779 - 19506835
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaa 19506835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 35122047 - 35121991
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaa 35121991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 17577080 - 17577020
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  17577080 aaatttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaa 17577020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 13938495 - 13938555
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  13938495 aaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 13938555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 2554377 - 2554442
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  |||||||||||||  |||||| ||||||| ||||||    
T  2554377 caaaaaaatttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaa 2554442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 2923634 - 2923667
Alignment:
Q  181 agagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  2923634 agagattatacctgacggaactttgaagaaggaa 2923667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 14843505 - 14843440
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| || ||||||||||    ||||||||||| ||||||| ||||||||||||||    
T  14843505 caaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaa 14843440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 17605702 - 17605637
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| |||| |||||||| |||||||||||||| ||| ||| ||||||| ||||||    
T  17605702 caaaaaaaattatttaacaaagattcaatagaagagattatacctgatggagctttgaaaaaggaa 17605637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 21629490 - 21629425
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| ||||  ||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  21629490 caaaaaaaattatttaacaaggattcaatagaagagattatacctgacggagctttgaaaaaggaa 21629425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 24766782 - 24766717
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||| ||  ||||||||||||| ||||||| ||||||| ||||||    
T  24766782 caaaaaaatttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaa 24766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 26206110 - 26206170
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||| | |||| |||||||| ||| |||||||||| ||| ||| ||||||||||||||    
T  26206110 aaatttaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaa 26206170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 52907401 - 52907345
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaa 52907345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 962531 - 962466
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  962531 caaaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 962466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 2365050 - 2365115
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  2365050 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 2365115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 19919597 - 19919532
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  19919597 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 19919532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 17077660 - 17077600
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||||||| ||||||||  ||||||||||||| |||| || ||||||| ||||||    
T  17077660 aaatttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaa 17077600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 36731670 - 36731730
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  36731670 aaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 36731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 23819343 - 23819402
Alignment:
Q  155 aatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||| | |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  23819343 aatttaataaacaaagattcaatggaagagattatacttgatggagctttgaagaaggaa 23819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 12341623 - 12341558
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| |||||||| ||||||||||||||  |||||| |||| || ||||||    
T  12341623 caaaaaaatttatttaacaaagattcaatagaagagattatacccgacggagctttaaaaaaggaa 12341558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 34332183 - 34332118
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| |||| || ||||||    
T  34332183 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaa 34332118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 43121042 - 43120977
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| | | ||| ||||||||||||||    
T  43121042 caaaaaaatttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaa 43120977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 46908018 - 46907973
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  46908018 agattcaatggaagagattatacttgatggagctttgaagaaggaa 46907973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 16179717 - 16179777
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| |||| || ||||||| ||||||    
T  16179717 aaatttatttaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaa 16179777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 20825071 - 20825129
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaa 207  Q
    |||| ||||||||| |||| |||||||| |||||||||||||| ||||||| |||||||    
T  20825071 caaaaaaatttattaaacaaagattcaatagaagagattatacctgacggagctttgaa 20825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 17700252 - 17700317
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| |||||||| |||||||||||||  ||||||| ||||||| ||||||    
T  17700252 caaaaaaatttatttaacaaagattcaatagaagagattatatctgacggagctttgaaaaaggaa 17700317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 7925163 - 7925223
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  7925163 aaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 7925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 9923378 - 9923438
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  9923378 aaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 9923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 13878850 - 13878790
Alignment:
Q  154 aaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  13878850 aaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 13878790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 26774615 - 26774551
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaagga 213  Q
    |||| ||||||||| || | | |||||| |||||||||||||| ||||||| |||||||||||||    
T  26774615 caaaaaaatttatttaaaagatattcaatagaagagattatacatgacggagctttgaagaagga 26774551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 29721264 - 29721214
Alignment:
Q  164 aacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  29721264 aacatagattcaatggaagagattatacctgacggagctttgaaaaaggaa 29721214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 8300575 - 8300640
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||| ||||||    
T  8300575 caaaaaaatttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaa 8300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23942859 - 23942924
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| |||||||| | ||||||||  ||||||||||||| ||| ||| ||||||||||||||    
T  23942859 caaaaaaaattattcaataaagattcaatggaagagattatacatgatggagctttgaagaaggaa 23942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 24794501 - 24794557
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaa 24794557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 36157935 - 36157991
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    ||||| |||| ||||||||  ||||||||||||| ||| ||| ||||||||||||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaa 36157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 4024 - 4089
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  4024 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 105211 - 105146
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  105211 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 105146  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 4937496 - 4937431
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  4937496 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 4937431  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 11276616 - 11276551
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  11276616 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 11276551  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 17721407 - 17721472
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  17721407 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 17721472  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 29968746 - 29968811
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  29968746 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 29968811  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2820069 - 2820017
Alignment:
Q  169 agattcaagagaagagattatacttgacggaactttgaagaaggaacgaacat 221  Q
    |||||||| |||||||||||||| ||||||  |||||||||||||| ||||||    
T  2820069 agattcaatagaagagattatacctgacggggctttgaagaaggaaagaacat 2820017  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 4344630 - 4344680
Alignment:
Q  157 tttattcaacatagattcaagagaagagattatacttgacggaactttgaa 207  Q
    |||||| ||||||||||||| |||||||||||||| ||| ||| |||||||    
T  4344630 tttattaaacatagattcaatagaagagattatacatgagggagctttgaa 4344680  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 19735290 - 19735355
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  19735290 caaaaaaaattattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaa 19735355  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 31423366 - 31423431
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||| ||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  31423366 caaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 31423431  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 6051375 - 6051440
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| || |||| ||||||||||||||    
T  6051375 caaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaa 6051440  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 35541806 - 35541871
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  35541806 caaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaa 35541871  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 3544469 - 3544404
Alignment:
Q  149 caaacaaatttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||| ||||||||| || ||||||||||    ||||||||||| ||||||| ||||||||||||||    
T  3544469 caaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaa 3544404  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 20796441 - 20796497
Alignment:
Q  158 ttattcaacatagattcaagagaagagattatacttgacggaactttgaagaaggaa 214  Q
    |||||||||| ||||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  20796441 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaa 20796497  T

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