View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7877_high_6 (Length: 375)

Name: NF7877_high_6
Description: NF7877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7877_high_6
NF7877_high_6
[»] chr5 (25 HSPs)
chr5 (105-362)||(19563670-19563924)
chr5 (63-121)||(19563927-19563985)
chr5 (203-324)||(23647701-23647822)
chr5 (203-324)||(23810751-23810872)
chr5 (147-298)||(6095244-6095395)
chr5 (141-250)||(32421893-32422002)
chr5 (192-274)||(40907574-40907656)
chr5 (182-283)||(5465398-5465499)
chr5 (192-283)||(43438592-43438683)
chr5 (194-324)||(6988188-6988318)
chr5 (192-298)||(40910903-40911009)
chr5 (211-300)||(15954950-15955039)
chr5 (224-283)||(35138951-35139010)
chr5 (146-269)||(5969958-5970085)
chr5 (182-239)||(14161064-14161121)
chr5 (219-255)||(24036624-24036660)
chr5 (222-269)||(22811080-22811127)
chr5 (192-269)||(16919468-16919546)
chr5 (222-283)||(117424-117485)
chr5 (203-256)||(7926138-7926191)
chr5 (87-124)||(19563871-19563908)
chr5 (216-269)||(19784861-19784914)
chr5 (222-250)||(4306608-4306636)
chr5 (223-283)||(11185188-11185248)
chr5 (203-247)||(34443052-34443096)
[»] chr3 (23 HSPs)
chr3 (141-320)||(32112009-32112188)
chr3 (192-283)||(25129467-25129558)
chr3 (222-302)||(41115271-41115351)
chr3 (148-262)||(44489365-44489479)
chr3 (223-281)||(24916581-24916639)
chr3 (222-273)||(10852723-10852774)
chr3 (226-285)||(48089616-48089675)
chr3 (141-283)||(40339241-40339383)
chr3 (222-299)||(31766159-31766236)
chr3 (205-298)||(39657983-39658076)
chr3 (280-324)||(36364992-36365036)
chr3 (222-301)||(42644302-42644382)
chr3 (214-250)||(47278795-47278831)
chr3 (226-269)||(3776622-3776665)
chr3 (222-269)||(7012680-7012727)
chr3 (222-300)||(25181250-25181328)
chr3 (203-299)||(30958113-30958210)
chr3 (203-299)||(30973925-30974022)
chr3 (222-283)||(44225605-44225666)
chr3 (205-254)||(49227236-49227285)
chr3 (205-269)||(4001213-4001277)
chr3 (222-298)||(38626752-38626828)
chr3 (204-300)||(51151624-51151719)
[»] chr2 (23 HSPs)
chr2 (141-324)||(36306980-36307163)
chr2 (146-324)||(4007090-4007267)
chr2 (146-269)||(10918576-10918699)
chr2 (168-274)||(36937147-36937253)
chr2 (205-298)||(10618863-10618956)
chr2 (223-303)||(1763270-1763350)
chr2 (205-269)||(8843045-8843109)
chr2 (225-300)||(42650354-42650429)
chr2 (192-242)||(411790-411840)
chr2 (183-257)||(21105520-21105594)
chr2 (221-283)||(42774785-42774847)
chr2 (223-295)||(6767772-6767844)
chr2 (214-269)||(22882866-22882921)
chr2 (222-269)||(23359942-23359989)
chr2 (216-298)||(11650684-11650766)
chr2 (183-269)||(20662990-20663076)
chr2 (205-250)||(9593018-9593063)
chr2 (222-283)||(12110923-12110984)
chr2 (205-298)||(40704659-40704752)
chr2 (234-298)||(42871547-42871612)
chr2 (223-298)||(2149750-2149823)
chr2 (222-301)||(18511151-18511231)
chr2 (221-285)||(43969800-43969864)
[»] chr7 (20 HSPs)
chr7 (141-324)||(35105173-35105356)
chr7 (182-320)||(26984373-26984510)
chr7 (205-300)||(42481801-42481896)
chr7 (222-269)||(29829311-29829358)
chr7 (222-322)||(40491674-40491774)
chr7 (223-298)||(5489783-5489857)
chr7 (147-234)||(38453371-38453458)
chr7 (203-256)||(44570695-44570748)
chr7 (222-273)||(20088930-20088981)
chr7 (219-250)||(26975317-26975348)
chr7 (205-303)||(33076441-33076539)
chr7 (222-284)||(44274699-44274761)
chr7 (219-269)||(44967400-44967450)
chr7 (222-271)||(12306819-12306868)
chr7 (222-283)||(15311203-15311264)
chr7 (203-256)||(25156277-25156330)
chr7 (192-283)||(35812377-35812465)
chr7 (149-250)||(41792383-41792484)
chr7 (223-255)||(18350120-18350152)
chr7 (222-298)||(37148582-37148658)
[»] chr1 (25 HSPs)
chr1 (168-300)||(40642939-40643071)
chr1 (141-250)||(3887409-3887518)
chr1 (203-257)||(6953497-6953551)
chr1 (214-283)||(26605154-26605223)
chr1 (222-283)||(4347038-4347099)
chr1 (183-256)||(44786873-44786946)
chr1 (222-303)||(47981776-47981857)
chr1 (222-298)||(13344837-13344913)
chr1 (193-269)||(47978376-47978452)
chr1 (203-274)||(5268296-5268367)
chr1 (222-269)||(29759715-29759762)
chr1 (222-300)||(3515903-3515981)
chr1 (223-292)||(35961465-35961534)
chr1 (211-283)||(4192560-4192632)
chr1 (217-256)||(7335907-7335946)
chr1 (222-301)||(40352455-40352534)
chr1 (205-255)||(32365126-32365176)
chr1 (202-248)||(35689986-35690032)
chr1 (228-298)||(38512421-38512491)
chr1 (219-269)||(49242997-49243047)
chr1 (219-269)||(50751243-50751293)
chr1 (221-270)||(184819-184868)
chr1 (205-246)||(441600-441641)
chr1 (222-271)||(48510972-48511021)
chr1 (203-300)||(31844170-31844268)
[»] chr8 (22 HSPs)
chr8 (182-292)||(38516306-38516416)
chr8 (169-269)||(24183791-24183891)
chr8 (146-301)||(24776360-24776519)
chr8 (202-257)||(28805251-28805306)
chr8 (237-298)||(13418737-13418798)
chr8 (222-303)||(36779439-36779520)
chr8 (203-283)||(26100074-26100154)
chr8 (222-323)||(32994128-32994231)
chr8 (212-256)||(40991601-40991645)
chr8 (222-269)||(19649234-19649281)
chr8 (203-269)||(3467562-3467628)
chr8 (181-231)||(9722282-9722332)
chr8 (223-269)||(10552923-10552969)
chr8 (222-284)||(20190187-20190249)
chr8 (222-283)||(1373087-1373148)
chr8 (238-295)||(4662823-4662880)
chr8 (223-300)||(10368062-10368139)
chr8 (203-300)||(18123303-18123400)
chr8 (214-283)||(24095385-24095454)
chr8 (202-283)||(35495066-35495147)
chr8 (211-283)||(5656392-5656464)
chr8 (222-298)||(32927988-32928064)
[»] chr4 (14 HSPs)
chr4 (146-251)||(7206302-7206407)
chr4 (219-324)||(48575477-48575582)
chr4 (169-269)||(47733543-47733643)
chr4 (207-296)||(50945390-50945479)
chr4 (203-283)||(17898057-17898136)
chr4 (219-298)||(20911812-20911891)
chr4 (222-299)||(38740286-38740363)
chr4 (148-274)||(11302419-11302543)
chr4 (222-269)||(29468575-29468622)
chr4 (222-269)||(33843807-33843854)
chr4 (222-272)||(36150629-36150679)
chr4 (234-298)||(24364105-24364169)
chr4 (203-247)||(27096562-27096606)
chr4 (203-279)||(46507969-46508045)
[»] chr6 (13 HSPs)
chr6 (203-298)||(1499977-1500072)
chr6 (203-283)||(3525002-3525082)
chr6 (220-283)||(7953077-7953140)
chr6 (227-283)||(579030-579087)
chr6 (219-256)||(20846420-20846457)
chr6 (223-283)||(34073460-34073520)
chr6 (222-269)||(882782-882829)
chr6 (205-256)||(4894013-4894064)
chr6 (203-250)||(32888918-32888965)
chr6 (212-269)||(3816378-3816435)
chr6 (223-256)||(25208723-25208756)
chr6 (222-258)||(42950-42986)
chr6 (203-247)||(2493975-2494019)
[»] scaffold0015 (1 HSPs)
scaffold0015 (222-283)||(65540-65601)
[»] scaffold0009 (1 HSPs)
scaffold0009 (213-271)||(207002-207061)
[»] scaffold0172 (1 HSPs)
scaffold0172 (222-283)||(15257-15318)


Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 105 - 362
Target Start/End: Complemental strand, 19563924 - 19563670
Alignment:
Q  105 agctataatttgtagcttttatgattctactagtatgctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatac 204  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19563924 agctataatttctagcttttatgattctactagta-gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcattgttaaatatac 19563826  T
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgta 304  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  19563825 ttttatataaatacattcaaacataaatcattttacattcagctcatttttatccagaatcaattatacat--tcgatttacttaaaatcaattctcgta 19563728  T
Q  305 aaagctgaaccaaacatacatttacttttttgcttattttattcttgaaatagtgatg 362  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19563727 aaagctgtaccaaacatacatttacttttttgcttattttattcttgaaatagtgatg 19563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 19563985 - 19563927
Alignment:
Q  63 gattctagaggtacttagaattgattttatgattctacaagcagctataatttgtagct 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19563985 gattctagaggtacttagaattgattttatgattctactagcagctataatttgtagct 19563927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 23647701 - 23647822
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcg 302  Q
    |||||||  ||||||||| |||||||||||||||||||||| ||  || ||| ||||| ||| |||| |||  |||||||| ||  |||||||||| |||    
T  23647701 acttttacgtaaatacatccaaacataaatcattttacatttaatccactttcatccaaaattaattttactgaatcaattcacacaaaatcaattatcg 23647800  T
Q  303 taaaagctgaaccaaacataca 324  Q
    ||||||||||||||||||||||    
T  23647801 taaaagctgaaccaaacataca 23647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 23810872 - 23810751
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcg 302  Q
    |||||||  ||||||||| |||||||||||||||||||||| ||  || ||| ||||| ||| |||| |||  |||||||| ||  |||||||||| |||    
T  23810872 acttttacgtaaatacatccaaacataaatcattttacatttaatccactttcatccaaaattaattttactgaatcaattcacacaaaatcaattatcg 23810773  T
Q  303 taaaagctgaaccaaacataca 324  Q
    ||||||||||||||||||||||    
T  23810772 taaaagctgaaccaaacataca 23810751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 298
Target Start/End: Complemental strand, 6095395 - 6095244
Alignment:
Q  147 atttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaa 246  Q
    |||||||| ||||||  ||| || || ||||| | | ||||||| |||||||||  | ||||| ||||||| |||||||||||||||||||| || ||||    
T  6095395 atttgtagtttttggcttctacattttattttagccataaattcattgttaaattcatttttacataaatatattcaaacataaatcatttttcaatcaa 6095296  T
Q  247 ctcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||| ||||| |||||||||| ||   |||||||||||| ||||| ||||    
T  6095295 ctcattattatctagaatcaattttatcaaatcaatttactcaaaattaatt 6095244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 32422002 - 32421893
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||| |||||||||| |||||  ||| ||||||||||| | ||||||||| ||| |||||  ||||||| |||||||||| ||||||||||||| ||| |    
T  32422002 gctacaatttgtagcatttggcttctacaattgattttagccttaaattcattgataaattcacttttacataaatacatccaaacataaatcacttttc 32421903  T
Q  241 attcaactca 250  Q
    ||||||||||    
T  32421902 attcaactca 32421893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 274
Target Start/End: Complemental strand, 40907656 - 40907574
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattataca 274  Q
    |||||||||||| |||||||||||||||||||  |||||||||  |||||||| |||| |||||||| | |||||||| ||||    
T  40907656 ttgttaaatatatttttatataaatacattcatgcataaatcacattacattcgactcgtttttatctaaaatcaattttaca 40907574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 5465499 - 5465398
Alignment:
Q  182 cttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaa 281  Q
    ||||||||| ||| |||||  | ||||| ||||||||||  |||||||||||||||| ||||||| ||| ||||||| | |||||||| |||| ||||||    
T  5465499 cttaaattcattgataaatcaatttttacataaatacatctaaacataaatcatttttcattcaattcacttttatctaaaatcaattttacaaaatcaa 5465400  T
Q  282 tt 283  Q
    ||    
T  5465399 tt 5465398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 43438683 - 43438592
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||||  | ||||| ||||||||||||||||||| || | |||||||| |||||| ||||||| | || ||||| |||||||||||||    
T  43438683 ttgttaaattcatttttacataaatacattcaaacatagataactttacatttaactcacttttatctaaaaacaattttacataatcaatt 43438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 6988188 - 6988318
Alignment:
Q  194 gttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaat 293  Q
    |||||||  ||||||| ||||||||||  ||||||||||||||||| |||||||| | |||||   | |||||||| |||| ||||||||| ||   |||    
T  6988188 gttaaattcacttttagataaatacatctaaacataaatcattttaaattcaacttacttttaattaaaatcaattttacaaaatcaatttcctctgaat 6988287  T
Q  294 caattctcgtaaaagctgaaccaaacataca 324  Q
    ||||||||| ||||  | ||||| |||||||    
T  6988288 caattctcggaaaaattcaaccacacataca 6988318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 40911009 - 40910903
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaa 291  Q
    ||||||||| ||||| || ||||||||||||| ||||||| ||  |||||||||||||| |||||| || ||| |||| |||| ||||| || | | |||    
T  40911009 ttgttaaatttacttctacataaatacattcatacataaaacacattacattcaactcacttttattcaaaataaattttacaaaatcacttcatttaaa 40910910  T
Q  292 atcaatt 298  Q
    |||||||    
T  40910909 atcaatt 40910903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 15955039 - 15954950
Alignment:
Q  211 ataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    ||||||||||| ||||||||||| |||||||||||| ||| |||||  | || |||||| |||| ||||||| |||| ||||| ||||||    
T  15955039 ataaatacatttaaacataaatccttttacattcaaatcacttttaatccgattcaattttacaaaatcaatctactcaaaatgaattct 15954950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 35139010 - 35138951
Alignment:
Q  224 aacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||||||| ||||||||| |||||  ||||||||| | |||||||||||||    
T  35139010 aacataaatcattttaccttcaactcaattttagacagaatcaagtttacataatcaatt 35138951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 269
Target Start/End: Complemental strand, 5970085 - 5969958
Alignment:
Q  146 aatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacatt----caaacataaatcattttaca 241  Q
    |||||| |||||||||  ||| || |||||||| | ||||||||  | |||||||  ||| ||| | |||||||||    ||||||||||||| ||||||    
T  5970085 aatttgcagcttttggcttctacagttgattttagccttaaatttatggttaaatccactattacacaaatacatttaaacaaacataaatcactttaca 5969986  T
Q  242 ttcaactcatttttatccagaatcaatt 269  Q
    ||||||||| || |||||| ||||||||    
T  5969985 ttcaactcacttatatccaaaatcaatt 5969958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 14161121 - 14161064
Alignment:
Q  182 cttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcatttta 239  Q
    ||||||||  |||||||| ||| ||||| || ||||||||||||||||||||||||||    
T  14161121 cttaaatttattgttaaacatatttttacattaatacattcaaacataaatcatttta 14161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 24036624 - 24036660
Alignment:
Q  219 attcaaacataaatcattttacattcaactcattttt 255  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24036624 attcaaacataaatcattttacattcaactcactttt 24036660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 22811080 - 22811127
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  22811080 caaacataaatcactttacattcaactcacttttaaccaaaatcaatt 22811127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 16919468 - 16919546
Alignment:
Q  192 ttgttaaatatactttt-atataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||||||| |||| | ||||||||||  ||||| ||||  ||||| |||||||||||| ||||| ||||||||||    
T  16919468 ttgttaaatatattttttacataaatacatctaaacaaaaatacttttaaattcaactcattattatcaagaatcaatt 16919546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 117485 - 117424
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||| ||||||||||| ||||||||| || ||  ||||||||||  |||||||||||||    
T  117485 caaacatgaatcattttaccttcaactcacttctagtcagaatcaatattacataatcaatt 117424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 7926138 - 7926191
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    ||||||| ||||||| ||||||||||| ||||||  |||||||||||| |||||    
T  7926138 acttttacataaatatattcaaacatagatcattcaacattcaactcactttta 7926191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 19563908 - 19563871
Alignment:
Q  87 ttttatgattctacaagcagctataatttgtagctttt 124  Q
    |||||||||||||| || ||||||||||||||||||||    
T  19563908 ttttatgattctactagtagctataatttgtagctttt 19563871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 19784861 - 19784914
Alignment:
Q  216 tacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||| |||||||||| || ||||||||||||||| ||||| ||| ||||||||    
T  19784861 tacatccaaacataaaccactttacattcaactcacttttaaccaaaatcaatt 19784914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 4306608 - 4306636
Alignment:
Q  222 caaacataaatcattttacattcaactca 250  Q
    |||||||||||||||||||||||||||||    
T  4306608 caaacataaatcattttacattcaactca 4306636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 11185188 - 11185248
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||| ||||||||||||||||| | |||||||  |  |||||||| |||||||||||||    
T  11185188 aaacatgaatcattttacattcaatttatttttaatcttaatcaattttacataatcaatt 11185248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 34443052 - 34443096
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaac 247  Q
    ||||||||||||||  |||||||||||||| ||||||| ||||||    
T  34443052 acttttatataaatgtattcaaacataaattattttactttcaac 34443096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 320
Target Start/End: Original strand, 32112009 - 32112188
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||| ||||||||||||||||  | |  |||||||||| | ||||||||| |||||||||  ||||||| ||||||| || ||||||||||| | ||| |    
T  32112009 gctacaatttgtagcttttggcttttagaattgattttagacttaaattcattgttaaatccacttttacataaataaatccaaacataaattacttttc 32112108  T
Q  241 attcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaaca 320  Q
    |||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||   |||||||||||| ||||||    
T  32112109 attcaactcatttttatccataatcaattttacataatcaattcactcaaaatcaatttgagtaaaagctgaatcaaaca 32112188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 25129558 - 25129467
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||||  ||||||| |||||||||| |||||||||||||  |||||||||||||| |||||||| ||||||||| ||||  |||||||    
T  25129558 ttgttaaatccacttttacataaatacatccaaacataaatcacgttacattcaactcacttttatcctgaatcaattttacaacatcaatt 25129467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 41115351 - 41115271
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcg 302  Q
    |||||||||| |||||||||||||||||||| ||| ||| ||||||||||||| |||||||| | | | ||||||||||||    
T  41115351 caaacataaaccattttacattcaactcattgttagccaaaatcaattatacaaaatcaattcattcataatcaattctcg 41115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 44489479 - 44489365
Alignment:
Q  148 tttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaac 247  Q
    ||||||||||||||| ||| ||||||||||| ||||| ||||| ||||| |||  |||||||  |||||| || |||||||||| || | |||||||||     
T  44489479 tttgtagcttttggtttctacaattgattttagtcttgaattcattgttcaattcacttttacctaaatatatccaaacataaaccactctacattcaat 44489380  T
Q  248 tcatttttatccaga 262  Q
     |||||||| |||||    
T  44489379 ccatttttagccaga 44489365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 24916581 - 24916639
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaa 281  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||| |||| ||||||    
T  24916581 aaacataaatcattttacattcaactcacttttagcctgaatcaattttacaaaatcaa 24916639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 10852774 - 10852723
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatac 273  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||    
T  10852774 caaacataaatcactttacattcaactcacttttaaccaaaatcaattatac 10852723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 48089675 - 48089616
Alignment:
Q  226 cataaatcattttacattcaactcatttttatccagaatcaattatacataatcaattta 285  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| || | ||||||||||    
T  48089675 cataaatcattttacattcaactcacttttaactagaatcaattttaaagaatcaattta 48089616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 283
Target Start/End: Original strand, 40339241 - 40339383
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||| |||||||||||||| |  ||| ||||||||||| | ||| ||||  ||||| |||  |||||||  |||||| || |||||||||| || |||||    
T  40339241 gctacaatttgtagctttttgcttctacaattgattttagccttgaatttattgttcaattcacttttacctaaatatatccaaacataaaccactttac 40339340  T
Q  241 attcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||| |||  ||||   |||||||||||||||| ||| ||||    
T  40339341 attcagctctctttttgacagaatcaattatacaaaattaatt 40339383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 31766236 - 31766159
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattc 299  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||| |||| |||| |||||||| | | |||||||||||    
T  31766236 caaacataaatcactttaacttcaactcacttttatccaaaattaattttacaaaatcaattcattcaaaatcaattc 31766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 39658076 - 39657983
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||||||  | | ||||||||| ||||||||||||||  | |||||   | |||||||| ||||||||||||||| | ||||||||||    
T  39658076 ttttatataaatatgtgcgaacataaattattttacattcaacgaacttttaagtaaaatcaattttacataatcaatttattcaaaatcaatt 39657983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 36364992 - 36365036
Alignment:
Q  280 aatttactgaaaatcaattctcgtaaaagctgaaccaaacataca 324  Q
    |||||||| |||||||||| | |||||||||||||||||||||||    
T  36364992 aatttactcaaaatcaattattgtaaaagctgaaccaaacataca 36365036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 42644302 - 42644382
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaa-ttatacataatcaatttactgaaaatcaattctc 301  Q
    ||||||||||||| ||||||||||||||| ||||| | | |||||| || || | |||||||| ||| |||||||||||||    
T  42644302 caaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaattctc 42644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 47278795 - 47278831
Alignment:
Q  214 aatacattcaaacataaatcattttacattcaactca 250  Q
    |||| ||||||||||||||||||||||||||||||||    
T  47278795 aatatattcaaacataaatcattttacattcaactca 47278831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 3776622 - 3776665
Alignment:
Q  226 cataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  3776622 cataaatcactttacattcaactcaattttagccagaatcaatt 3776665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 7012680 - 7012727
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  7012680 caaacataaatcactttacattcaactcacttttaaccaaaatcaatt 7012727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 25181250 - 25181328
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    ||||||||||| |||||||||| |||||| |||||  || |||||||| |||| |||||||| | | || |||||||||    
T  25181250 caaacataaataattttacattaaactcacttttaatcaaaatcaattctacaaaatcaattcaatcaatatcaattct 25181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 30958113 - 30958210
Alignment:
Q  203 acttttatataaatacattcaaacataaatcat-tttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattc 299  Q
    ||||||| || |||| || ||||||||||| |  |||||||||||||||  |||| ||| |||||||| |||| |||||||| | | |||||||||||    
T  30958113 acttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaattc 30958210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 30973925 - 30974022
Alignment:
Q  203 acttttatataaatacattcaaacataaatcat-tttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattc 299  Q
    ||||||| || |||| || ||||||||||| |  |||||||||||||||  |||| ||| |||||||| |||| |||||||| | | |||||||||||    
T  30973925 acttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaattc 30974022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 44225605 - 44225666
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| |||||||| |||||| ||||| | | |||||||| |||| ||||||||    
T  44225605 caaacataaatcactttacattaaactcacttttaacgaaaatcaattctacaaaatcaatt 44225666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 49227236 - 49227285
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttt 254  Q
    ||||||||||||| |   |||||||||||| |||||||||||||||||||    
T  49227236 ttttatataaatataactaaacataaatcaatttacattcaactcatttt 49227285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 4001213 - 4001277
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||| ||||||||||  ||||||||||||||||| ||||||  || |||||||| ||| |||||    
T  4001213 ttttacataaatacatataaacataaatcattttatattcaaaccacttttatccggaaccaatt 4001277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 38626752 - 38626828
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||||||||| |||||||||||| ||||| | | | || | | ||||||||||||| | | ||||||||||    
T  38626752 caaacataaatcatttcacattcaactcacttttaactaaagtcgactttacataatcaattcattaaaaatcaatt 38626828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 51151624 - 51151719
Alignment:
Q  204 cttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    |||||| |||||||| | |||||||||||||||||| | |||||||| ||||| | | |||||||| || | || ||| || || ||||||||||||    
T  51151624 cttttacataaatac-tccaaacataaatcattttaaaatcaactcaattttaacgataatcaattttatagaaacaaatttctcaaaatcaattct 51151719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 324
Target Start/End: Original strand, 36306980 - 36307163
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||| ||||| |||||||||   ||| ||||||||||| | ||||||||  |||||||||  |||||||||||||||||| ||||||| ||| | |||||    
T  36306980 gctacaatttatagcttttgtcttctacaattgattttagccttaaatttattgttaaatccacttttatataaatacatacaaacatcaattactttac 36307079  T
Q  241 attcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaacataca 324  Q
     ||||||||| ||||||||| |||||||| ||||||||||||| ||| || ||||||| | ||||||||||||| |||||||||    
T  36307080 gttcaactcacttttatccataatcaattttacataatcaattcactcaagatcaatttttgtaaaagctgaactaaacataca 36307163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 4007267 - 4007090
Alignment:
Q  146 aatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattca 245  Q
    ||||||||| |||||   ||| ||||||||||| | ||||||||| ||| |||||  ||||||| |||||||||| ||||||||||| | ||| ||||||    
T  4007267 aatttgtagtttttgccttctgcaattgattttagccttaaattcattgataaatccacttttacataaatacat-caaacataaattacttttcattca 4007169  T
Q  246 actcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaacataca 324  Q
    ||||| ||||||||| |||||||| |||| |||||||  ||| ||||||||||   ||||||||||| |||| ||||||    
T  4007168 actcacttttatccataatcaattttacaaaatcaatccacttaaaatcaattacagtaaaagctgagccaaccataca 4007090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 10918576 - 10918699
Alignment:
Q  146 aatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattca 245  Q
    ||||||||||||||||  ||| ||| || |||| | ||||||||  |||| ||||  ||||||| | |||||||| ||||||||||||| ||||||||||    
T  10918576 aatttgtagcttttggcttctacaaatggttttagccttaaatttattgtcaaatccacttttacacaaatacatccaaacataaatcactttacattca 10918675  T
Q  246 actcatttttatccagaatcaatt 269  Q
    ||||| ||||||||| ||||||||    
T  10918676 actcacttttatccaaaatcaatt 10918699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 36937253 - 36937147
Alignment:
Q  168 caattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaa 267  Q
    ||||||||||| | ||| ||||  ||||| ||||||||||||  |||||| || |||| ||||| |||||||| || |||||| |||||||| |||||||    
T  36937253 caattgattttagccttgaatttattgttcaatatacttttacttaaatatatacaaatataaaccattttacgttaaactcacttttatccggaatcaa 36937154  T
Q  268 ttataca 274  Q
    |||||||    
T  36937153 ttataca 36937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 10618956 - 10618863
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||||||||||  || ||||||||| ||| ||||| ||||| ||||||||| | |||||||||| |||| |||||||| ||| ||||||||||    
T  10618956 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 10618863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 1763270 - 1763350
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgt 303  Q
    |||||||||||| |||| |||||||||| ||||| ||| |||||||| |||| |||||||||  | |||||||||||||||    
T  1763270 aaacataaatcactttaaattcaactcaattttaaccaaaatcaattttacaaaatcaattttatcaaaatcaattctcgt 1763350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 8843045 - 8843109
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||| |||| | ||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  8843045 ttttacataacttcatccaaacataaatcattttacattcaacccaattttatccagaatcaatt 8843109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 42650354 - 42650429
Alignment:
Q  225 acataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    |||||||||| ||||||||||||| | |||| |||| |||||| | ||||||||||||| ||| ||||||||||||    
T  42650354 acataaatcactttacattcaacttagttttgtccacaatcaaatttacataatcaattcactcaaaatcaattct 42650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 411790 - 411840
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacat 242  Q
    |||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  411790 ttgttaaatcaacttttatataaacacatccaaacataaatcattttacat 411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 21105520 - 21105594
Alignment:
Q  183 ttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttat 257  Q
    |||||||  ||||||||| || |||||||| |||| |||  ||||||||||||||||||||||| ||| ||||||    
T  21105520 ttaaattatttgttaaatctatttttatatgaatatattgcaacataaatcattttacattcaattcacttttat 21105594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 42774847 - 42774785
Alignment:
Q  221 tcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||| |||||||| ||||||| |||||||  ||||||||||| |||| ||||||||    
T  42774847 tcaaacataaaccattttaccttcaacttatttttagtcagaatcaattttacaaaatcaatt 42774785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 6767772 - 6767844
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatca 295  Q
    |||| ||||||| |||||||||||||||||||||  || |||||||| |||| ||||| |||| | |||||||    
T  6767772 aaacgtaaatcactttacattcaactcatttttaatcacaatcaattttacaaaatcagtttattcaaaatca 6767844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 22882866 - 22882921
Alignment:
Q  214 aatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||| |||||||||||| || ||||| |||| |||||||||| |||||||||    
T  22882866 aatacatttaaacataaatcacttaacatttaacttatttttatcctgaatcaatt 22882921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 23359989 - 23359942
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  23359989 caaacataaatcactttacattcaactcacttttaaccaaaatcaatt 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 11650766 - 11650684
Alignment:
Q  216 tacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||| ||||||||||||||| || |||||| | | |||||  || |||||| | ||||||||||||| ||| ||||||||||    
T  11650766 tacatccaaacataaatcattctatattcaattaaattttagtcataatcaaatttacataatcaattcactcaaaatcaatt 11650684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 20663076 - 20662990
Alignment:
Q  183 ttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||  |||||||||  ||||||| ||||| | || ||||||||||| | || ||||| |||| ||||||||| ||||||||||    
T  20663076 ttaaatttattgttaaatcaacttttacataaacagatccaaacataaattacttaacatttaactaatttttatctagaatcaatt 20662990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 9593018 - 9593063
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactca 250  Q
    |||||| |||||| ||||||||||||||||||||||| | ||||||    
T  9593018 ttttatgtaaatatattcaaacataaatcattttacagtaaactca 9593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 12110923 - 12110984
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| |||| |||||||||| ||||| ||| ||||||||  ||| ||||||||    
T  12110923 caaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaatt 12110984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 40704659 - 40704752
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||| |||  |||||||  ||||||| ||||||||||| | | ||||| ||| ||||||||  |||||||||||| | | ||||||||||    
T  40704659 ttttatattaatgtattcaaaattaaatcaatttacattcaaataaattttaaccaaaatcaatttcacataatcaattcattcaaaatcaatt 40704752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 42871547 - 42871612
Alignment:
Q  234 attttacattcaactcattttta-tccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||| ||||||||||||||||| | || |||||||| |||||||||||||| |  ||||||||||    
T  42871547 atttttcattcaactcatttttaattcaaaatcaattttacataatcaatttgcataaaatcaatt 42871612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 2149750 - 2149823
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||| ||||||| ||||||||||||||| ||| ||||  ||||  | ||| |||||||| ||||||||||    
T  2149750 aaacataaattattttactttcaactcatttttaaccataatctcttat--agaattaatttactcaaaatcaatt 2149823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 18511151 - 18511231
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattata-cataatcaatttactgaaaatcaattctc 301  Q
    ||||||||||||| || ||||| || ||| ||||| ||| ||||||||||| || |||||||||  | |||||||||||||    
T  18511151 caaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattctc 18511231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 43969800 - 43969864
Alignment:
Q  221 tcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaattta 285  Q
    ||||||||||| || || || ||||||||| |||||| ||||||||| | |||| ||||||||||    
T  43969800 tcaaacataaagcacttcactttcaactcacttttattcagaatcaactttacaaaatcaattta 43969864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 324
Target Start/End: Original strand, 35105173 - 35105356
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||||||||||||| ||||||| ||| ||||||| ||| | ||||||||| | | |||||  ||||||| ||||| |||| ||||||||||||| ||| |    
T  35105173 gctataatttgtagtttttggtttctacaattgactttagccttaaattcatcgataaatccacttttacataaaaacatccaaacataaatcacttttc 35105272  T
Q  241 attcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaacataca 324  Q
    ||||||  || ||| |||||||||||||| || | |||||||| ||| ||||||||||||  |||||||| | |||||||||||    
T  35105273 attcaatccactttcatccagaatcaattttaaaaaatcaattcactcaaaatcaattctgataaaagcttacccaaacataca 35105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 26984510 - 26984373
Alignment:
Q  182 cttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaa 281  Q
    ||||||||  |||||||||  |||||||| |||| |||||||||| ||||||| |||||||||||||| |||||||||| ||||| || |||||||||||    
T  26984510 cttaaatttattgttaaatccacttttatgtaaaaacattcaaacgtaaatcaatttacattcaactc-tttttatccaaaatcagttttacataatcaa 26984412  T
Q  282 tttactgaaaatcaattctcgtaaaagctgaaccaaaca 320  Q
    || | | |||||||||||  ||||||| | |||||||||    
T  26984411 ttcattcaaaatcaattcgtgtaaaagttaaaccaaaca 26984373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 42481896 - 42481801
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    ||||| |||||| ||| | ||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||| ||||||||||||    
T  42481896 ttttagataaatgcatccgaacataaatcattttacattcaactcactttttttcagaatcaattttacataatcaattcacttaaaatcaattct 42481801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 29829358 - 29829311
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29829358 caaacataaatcactttacattcaactcatttttagccagaatcaatt 29829311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 322
Target Start/End: Original strand, 40491674 - 40491774
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaacat 321  Q
    |||| |||||||| ||||| ||||||||| |||||  || |||||||| |||| |||||||| ||| |||||||||||| || |  || |||||||||||    
T  40491674 caaaaataaatcactttaccttcaactcacttttagtcaaaatcaattttacagaatcaattcactcaaaatcaattcttgtcaccgcagaaccaaacat 40491773  T
Q  322 a 322  Q
    |    
T  40491774 a 40491774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 5489857 - 5489783
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||| | ||||||||||||||||||||| || ||||||||| |||| |||||||| ||| |||| |||||    
T  5489857 aaacataaataactttacattcaactcatttttaaccggaatcaatt-tacacaatcaattcacttaaaaccaatt 5489783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 38453371 - 38453458
Alignment:
Q  147 atttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatca 234  Q
    ||||||| ||||||   ||| ||||||||||| | ||||||||| ||| |||||  ||||||| ||||||||||| ||||||||||||    
T  38453371 atttgtaacttttgacttctacaattgattttagccttaaattcattgataaatccacttttacataaatacattaaaacataaatca 38453458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 44570748 - 44570695
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    |||||||||| |||| | |||||||||||||| ||||||||||||||| |||||    
T  44570748 acttttatatgaatataatcaaacataaatcactttacattcaactcaatttta 44570695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 20088930 - 20088981
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatac 273  Q
    ||||||||||||| ||||| ||||||||| ||||| ||| ||||||||||||    
T  20088930 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattatac 20088981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 26975348 - 26975317
Alignment:
Q  219 attcaaacataaatcattttacattcaactca 250  Q
    ||||||||||||||||||||||||||||||||    
T  26975348 attcaaacataaatcattttacattcaactca 26975317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 33076539 - 33076441
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgt 303  Q
    |||||| |||||| |||  ||||| || ||||||  |||||||||||||||| ||| ||||||||| ||| | | |||||| | |||||||||| ||||    
T  33076539 ttttatctaaatatatttcaacatcaaacattttgtattcaactcatttttagccataatcaattaaacaaagttaatttatttaaaatcaattatcgt 33076441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 44274699 - 44274761
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaattt 284  Q
    ||||||||||||||||||  || |||||| ||||| ||| |||||||||| || |||||||||    
T  44274699 caaacataaatcattttatcttaaactcacttttaaccaaaatcaattatgcaaaatcaattt 44274761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 44967450 - 44967400
Alignment:
Q  219 attcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||||||||||| || |||||||||||| ||||| ||| ||||||||    
T  44967450 attcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 44967400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 12306819 - 12306868
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattat 271  Q
    ||||||||||||| ||||  ||||||||| ||||| ||||||||||||||    
T  12306819 caaacataaatcactttatcttcaactcacttttagccagaatcaattat 12306868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 15311264 - 15311203
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| | ||||||||||||| ||||| ||| | |||||| |||| ||||||||    
T  15311264 caaacataaatcactatacattcaactcacttttaaccatattcaattttacacaatcaatt 15311203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 25156277 - 25156330
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    |||||||||| |||  ||||||||| |||||||||||  |||||||||||||||    
T  25156277 acttttatatgaatgtattcaaacacaaatcattttatcttcaactcattttta 25156330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 35812377 - 35812465
Alignment:
Q  192 ttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||||  | ||||||||||||| ||||||   ||||  ||||||||||||||| |||||| | || |||||||| |||| ||||||||    
T  35812377 ttgttaaatccatttttatataaatatattcaa---taaactattttacattcaactaattttttttcaaaatcaattttacaaaatcaatt 35812465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 41792383 - 41792484
Alignment:
Q  149 ttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaact 248  Q
    |||||| ||||||  ||| |||||||||||    |||||||  ||||||||| || |||||  ||||| ||| |||||| |||||| |||||||||||||    
T  41792383 ttgtagtttttggcttctacaattgattttaactttaaatttattgttaaatctatttttacttaaattcatccaaacacaaatcactttacattcaact 41792482  T
Q  249 ca 250  Q
    ||    
T  41792483 ca 41792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 18350152 - 18350120
Alignment:
Q  223 aaacataaatcattttacattcaactcattttt 255  Q
    |||||||||||||||||||||||||||| ||||    
T  18350152 aaacataaatcattttacattcaactcactttt 18350120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 37148658 - 37148582
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||| |||||||||| |||||||||||||||||  || |||||||| || | ||| ||||||   ||||||||||    
T  37148658 caaacagaaatcatttttcattcaactcatttttaatcaaaatcaattttatagaattaatttaaccaaaatcaatt 37148582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 40642939 - 40643071
Alignment:
Q  168 caattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaa 267  Q
    ||||||||||| ||||||||||| |||| |||| |||||||| | |||||| | ||||||||||||| |||||||||||||   | ||||||| ||||||    
T  40642939 caattgattttagtcttaaattcattgtcaaatctacttttacacaaatacgtccaaacataaatcactttacattcaacttgctcttatccaaaatcaa 40643038  T
Q  268 ttatacataatcaatttactgaaaatcaattct 300  Q
    || |||| |||||||| ||| ||||||||||||    
T  40643039 ttttacagaatcaattcactcaaaatcaattct 40643071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 3887518 - 3887409
Alignment:
Q  141 gctataatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttac 240  Q
    |||| ||||||||||||||||  ||| ||||||||||| | ||||||||  || ||||||  ||||||| |||||||||| |||||||||| ||||||||    
T  3887518 gctagaatttgtagcttttggcttctacaattgattttagccttaaatttattattaaatccacttttacataaatacatccaaacataaaacattttac 3887419  T
Q  241 attcaactca 250  Q
    ||| ||||||    
T  3887418 attgaactca 3887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 6953551 - 6953497
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttat 257  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  6953551 acttttacataaatacattcaaacataaaccattttacattctactcatttttat 6953497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 26605154 - 26605223
Alignment:
Q  214 aatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||| |||||||||| | |||||||| |||| | ||||||||| ||||||||||||||||||||||    
T  26605154 aatacattgaaacataaattaatttacatttaactaacttttatccacaatcaattatacataatcaatt 26605223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 4347038 - 4347099
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||| |||| ||||||||    
T  4347038 caaacataaatcactttacattcaactcacttttaaccaaaatcaattctacaaaatcaatt 4347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 44786946 - 44786873
Alignment:
Q  183 ttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    ||||||| |||||| |||  ||||||| || |||  |||| |||||||||||||||||||||||||||||||||    
T  44786946 ttaaatttgttgttgaattcacttttacatgaatgtattcgaacataaatcattttacattcaactcattttta 44786873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 47981857 - 47981776
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgt 303  Q
    ||||||||||||| |||| |||||||||| ||||| ||| ||| |||| |||| |||||||||  | |||||||||||||||    
T  47981857 caaacataaatcactttaaattcaactcaattttaaccaaaattaattttacaaaatcaattttattaaaatcaattctcgt 47981776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 13344837 - 13344913
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||||||||||| ||||| ||||||||| ||||| ||| |||||||| |||| |||||||| | | ||||||||||    
T  13344837 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattctacaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 47978452 - 47978376
Alignment:
Q  193 tgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||  ||||| | |||||||||| ||| ||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  47978452 tgttaaattcactttgacataaatacatccaaccataaatcactttacattcaactcacttttacccaaaatcaatt 47978376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 5268296 - 5268367
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattataca 274  Q
    ||||||| || |||| ||||||||| |||||| ||||||||||||||| |||||  ||||||||||| ||||    
T  5268296 acttttacatgaatatattcaaacaaaaatcactttacattcaactcacttttaggcagaatcaattttaca 5268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 29759715 - 29759762
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  29759715 caaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 3515903 - 3515981
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    |||||| |||||| || || ||||||||| ||||  |||||||||||| ||||||||||||| ||| |||| |||||||    
T  3515903 caaacacaaatcacttcaccttcaactcaattttcaccagaatcaattttacataatcaattcactcaaaaccaattct 3515981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 35961465 - 35961534
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaa 292  Q
    |||||||||||||||||| ||||||||| ||||| ||  |||| ||| |||| |||||||||||| ||||    
T  35961465 aaacataaatcattttaccttcaactcacttttagccgtaatctattttacagaatcaatttactcaaaa 35961534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 4192560 - 4192632
Alignment:
Q  211 ataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||| ||| |||||||| | ||||||||||||| |||||| || |||||||| || ||||| ||||    
T  4192560 ataaatacatttaaagataaatcaatctacattcaactcacttttattcaaaatcaattttatataattaatt 4192632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 7335946 - 7335907
Alignment:
Q  217 acattcaaacataaatcattttacattcaactcattttta 256  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  7335946 acattcaaacataaatcactttacattcaactcactttta 7335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 40352455 - 40352534
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctc 301  Q
    ||||||||||||| |||||||| |||||| ||||| ||| ||||||||  ||| ||||||||   | |||||||||||||    
T  40352455 caaacataaatcactttacattaaactcacttttaaccaaaatcaattccacaaaatcaattctatcaaaatcaattctc 40352534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 32365126 - 32365176
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcattttt 255  Q
    |||||| ||||||  ||||||||||||||| ||||||||||||||| ||||    
T  32365126 ttttatttaaatatgttcaaacataaatcaatttacattcaactcactttt 32365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 35690032 - 35689986
Alignment:
Q  202 tacttttatataaatacattcaaacataaatcattttacattcaact 248  Q
    |||||||| |||| || ||||||| ||||||||||||||||||||||    
T  35690032 tacttttacataactatattcaaatataaatcattttacattcaact 35689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 38512421 - 38512491
Alignment:
Q  228 taaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||| ||| |||||||||||||| || |||| ||||| |||| |||| |||||||| ||| ||||||||||    
T  38512421 taaagcatgttacattcaactcacttatatcaagaattaattttacaaaatcaattcacttaaaatcaatt 38512491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 49243047 - 49242997
Alignment:
Q  219 attcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||||||||||| || |||| ||||||||||||| ||| ||||||||    
T  49243047 attcaaacataaatcaattcacatccaactcatttttaaccaaaatcaatt 49242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 50751293 - 50751243
Alignment:
Q  219 attcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||||||||||||||| |||||| |||||  | |||||||||    
T  50751293 attcaaacataaatcattttacatttaactcacttttagtccgaatcaatt 50751243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 184868 - 184819
Alignment:
Q  221 tcaaacataaatcattttacattcaactcatttttatccagaatcaatta 270  Q
    |||||||||||||||||||| | || |||| |||||||| ||||||||||    
T  184868 tcaaacataaatcattttacctacatctcacttttatcccgaatcaatta 184819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 441641 - 441600
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaa 246  Q
    ||||||||||||  ||||||||||||||||||| ||||||||    
T  441641 ttttatataaatgtattcaaacataaatcatttcacattcaa 441600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 48510972 - 48511021
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattat 271  Q
    ||||||||||||| || |||||||||||| ||||| ||| ||||||||||    
T  48510972 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattat 48511021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 31844268 - 31844170
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaa--ttatacataatcaatttactgaaaatcaattct 300  Q
    ||||||||||||||| ||   ||||||||||| ||||||||||||| | |||||| |  ||||||  ||| ||||||||||||||||  | |||||||||    
T  31844268 acttttatataaatatatatgaacataaatcactttacattcaacttacttttattccaaatcaaagtta-acataatcaatttacttcatatcaattct 31844170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 38516306 - 38516416
Alignment:
Q  182 cttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaa 281  Q
    ||||||||| ||||||||  || ||||| |||||||||| ||||||||||||| ||||||||||||||| | ||||| | |||||||| |||| ||||||    
T  38516306 cttaaattcattgttaaaactatttttacataaatacatccaaacataaatcactttacattcaactcactattatcgaaaatcaattctacaaaatcaa 38516405  T
Q  282 tttactgaaaa 292  Q
    || ||| ||||    
T  38516406 ttcactcaaaa 38516416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 24183791 - 24183891
Alignment:
Q  169 aattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaat 268  Q
    |||||||||| |  |||||||  ||| |||||  ||||||| ||| ||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  24183791 aattgattttagctttaaatttattgataaatccacttttacatatatacattcaaatataaatcatttttcattcaattcatttttattcagaatcaat 24183890  T
Q  269 t 269  Q
    |    
T  24183891 t 24183891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 301
Target Start/End: Original strand, 24776360 - 24776519
Alignment:
Q  146 aatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattca 245  Q
    |||||||| ||||||   ||| |||||||||||   ||||| ||  |||||||||   |||||| |||||| | ||||| ||||||||| ||||||||||    
T  24776360 aatttgtaacttttgacttctacaattgattttacccttaattttattgttaaatccccttttacataaatgccttcaagcataaatcactttacattca 24776459  T
Q  246 actcatttttatccag----aatcaattatacataatcaatttactgaaaatcaattctc 301  Q
    | ||| |||||||||     |||||||| |||| |||||||||| | |||||||||||||    
T  24776460 aatcacttttatccatctataatcaattctacaaaatcaatttaatcaaaatcaattctc 24776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 28805251 - 28805306
Alignment:
Q  202 tacttttatataaatacattcaaacataaatcattttacattcaactcatttttat 257  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||||    
T  28805251 tacttttatattaatgtattcaaacataaatcattttactttcaaatcatttttat 28805306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 13418798 - 13418737
Alignment:
Q  237 ttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||||||| |||||  ||||||||||| ||| ||||||||| ||| ||||||||||    
T  13418798 ttacattcaactcacttttagtcagaatcaattctacctaatcaattcactcaaaatcaatt 13418737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 36779439 - 36779520
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgt 303  Q
    ||||||||||| | ||||||||||||||| |||||  || |||||||| |||| ||||||||   | |||||||||||||||    
T  36779439 caaacataaattactttacattcaactcacttttaatcaaaatcaattctacaaaatcaattatatcaaaatcaattctcgt 36779520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 26100154 - 26100074
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||| |||||| ||| |||||| ||||   ||||| |||||||| ||||||  ||||||||||| |||||||||||||    
T  26100154 acttttacataaatgcatccaaacacaaatagctttaccttcaactcgtttttagtcagaatcaattttacataatcaatt 26100074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 32994231 - 32994128
Alignment:
Q  222 caaacataaatca--ttttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaac 319  Q
    |||||||||||||  |||||| ||||||||| ||| | |||||||||||| |||||||||| || | | |||||||||| || | |  || |||||||||    
T  32994231 caaacataaatcaaattttaccttcaactcactttcagccagaatcaattttacataatcagttcattcaaaatcaattgtcatcactgcagaaccaaac 32994132  T
Q  320 atac 323  Q
    ||||    
T  32994131 atac 32994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 40991645 - 40991601
Alignment:
Q  212 taaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    ||||||||||||||||||||  | |||||||||||||||||||||    
T  40991645 taaatacattcaaacataaacaactttacattcaactcattttta 40991601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 19649234 - 19649281
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  19649234 caaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 3467562 - 3467628
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||| ||||||| || |||||| |||||| || |||||||||||| ||||| ||| ||||||||    
T  3467562 acttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaatt 3467628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 9722332 - 9722282
Alignment:
Q  181 tcttaaattcgttgttaaatatacttttatataaatacattcaaacataaa 231  Q
    |||||||||  || ||||||||||||||| ||||||||||| |||||||||    
T  9722332 tcttaaatttattattaaatatacttttacataaatacattaaaacataaa 9722282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||||||||||| ||||||||||||||| ||||| ||| ||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 20190187 - 20190249
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaattt 284  Q
    ||||||||||||||||||  || |||||| ||||| ||| |||||||||| || |||||||||    
T  20190187 caaacataaatcattttatcttaaactcacttttaaccaaaatcaattatgcaaaatcaattt 20190249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 1373087 - 1373148
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| || |  ||||||||| ||||||||| |||||||| |||| ||||||||    
T  1373087 caaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaatcaatt 1373148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 4662880 - 4662823
Alignment:
Q  238 tacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatca 295  Q
    |||||| |||||| |||||  ||||||||||| ||||||||||||| ||| |||||||    
T  4662880 tacatttaactcagttttagtcagaatcaattttacataatcaattcactcaaaatca 4662823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 10368062 - 10368139
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    ||||| |||||| ||||| ||||||||| |||||  || |||||||| |||| || ||||| ||| ||||||||||||    
T  10368062 aaacacaaatcactttaccttcaactcacttttactcaaaatcaattttacaaaaacaattcactcaaaatcaattct 10368139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 300
Target Start/End: Original strand, 18123303 - 18123400
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattct 300  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||| ||| |||||   ||| || ||| ||||| ||||||| |||  |||||||||||    
T  18123303 acttttacataaatatattccaacacaaatcattttaccttcaattcacttttagttagagtcgattttacatcatcaattcactctaaatcaattct 18123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 24095454 - 24095385
Alignment:
Q  214 aatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||||||||||| |||| || ||||| |  ||||| ||  ||||||| |||||||||||||    
T  24095454 aatacattcaaacataaatcaatttatatccaactaacctttatacatgatcaattttacataatcaatt 24095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 35495066 - 35495147
Alignment:
Q  202 tacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||| || |||| || |||||| |||||| |||| ||||||| || |||||  ||||| ||||| |||||||||||||    
T  35495066 tacttttacatgaatatatccaaacacaaatcactttatattcaacccacttttaatcagaagcaattttacataatcaatt 35495147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 5656392 - 5656464
Alignment:
Q  211 ataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||| |||||||||||||| | |||| |||||| ||| ||||   ||||||||||| |||||||| ||||    
T  5656392 ataaatatattcaaacataaataaatttatattcaattcacttttgatcagaatcaattttacataataaatt 5656464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 32927988 - 32928064
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||| |||||| ||| | ||||||||| |||||   |||||||||| |||||||||||||  || ||||||||||    
T  32927988 caaacacaaatcactttgccttcaactcaattttagtaagaatcaattttacataatcaattccctcaaaatcaatt 32928064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 7206302 - 7206407
Alignment:
Q  146 aatttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattca 245  Q
    ||||||||||||||||  ||| ||||||||||| | ||||||||  ||||||||| || ||||| |||||||||| |||| |||||||| ||||||||||    
T  7206302 aatttgtagcttttggcttctacaattgattttagccttaaatttattgttaaatctagttttacataaatacatccaaatataaatcactttacattca 7206401  T
Q  246 actcat 251  Q
     |||||    
T  7206402 tctcat 7206407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 48575477 - 48575582
Alignment:
Q  219 attcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattctcgtaaaagctgaaccaaa 318  Q
    ||||||| ||||| |||||||||||||||||||||||||| | |||||||| |||| |||||||| | | ||||| |||| | |||||| |  |||||||    
T  48575477 attcaaaaataaaccattttacattcaactcatttttatcaaaaatcaattttacaaaatcaattcattcaaaattaatttttgtaaaaacccaaccaaa 48575576  T
Q  319 cataca 324  Q
    ||||||    
T  48575577 cataca 48575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 47733643 - 47733543
Alignment:
Q  169 aattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaat 268  Q
    |||||||||| | ||||||||  || |||||| || ||||| ||||||||||  ||| ||| |||||||||||||||||| | ||||||||| |||||||    
T  47733643 aattgattttagccttaaatttattattaaatctaattttacataaatacatcaaaatatatatcattttacattcaactaacttttatccataatcaat 47733544  T
Q  269 t 269  Q
    |    
T  47733543 t 47733543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 50945479 - 50945390
Alignment:
Q  207 ttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaa 296  Q
    ||||||||| ||||  |||||||||||| |||||||| ||||||  ||||||| ||||||||| || | |||||||| ||| ||||||||    
T  50945479 ttatataaaaacatcaaaacataaatcactttacatttaactcaaatttatccggaatcaattttataaaatcaattcactcaaaatcaa 50945390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 17898136 - 17898057
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||  |||||| || ||||||||||||| ||||||||||||||| ||| |  |||||||||||||||| ||||||||    
T  17898136 acttttacctaaatatatccaaacataaatcactttacattcaactcactttca-gcagaatcaattatacaaaatcaatt 17898057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 20911891 - 20911812
Alignment:
Q  219 attcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    |||||||||||||| ||||| | |||||||||  |||  ||| |||||||| ||||||||||||| ||| ||||||||||    
T  20911891 attcaaacataaattattttgccttcaactcaacttttgccataatcaattttacataatcaattcactcaaaatcaatt 20911812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 38740363 - 38740286
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaattc 299  Q
    ||||||||||||| || |  ||||||||| ||||||||| |||||||| |||| |||||||| | | |||||||||||    
T  38740363 caaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaatcaattcattcaaaatcaattc 38740286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 11302419 - 11302543
Alignment:
Q  148 tttgtagcttttggtctcttcaattgatttttgtcttaaattcgttgttaaatatacttttatataaatacattcaaacataaatcattttacattcaac 247  Q
    ||||||||||||||  ||| || |||||||| |  |||||||  | || ||||  ||||||| | |||||||| ||||||  |||||||||||||||| |    
T  11302419 tttgtagcttttggcttctacacttgattttagcattaaatttatcgtcaaattcacttttacacaaatacatccaaaca--aatcattttacattcatc 11302516  T
Q  248 tcatttttatccagaatcaattataca 274  Q
    ||| |||||| || |||||||| ||||    
T  11302517 tcacttttattcataatcaattttaca 11302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 29468622 - 29468575
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||| |||||||| ||||||||||||||||||||| ||| ||||||||    
T  29468622 caaatataaatcactttacattcaactcatttttagccataatcaatt 29468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 33843807 - 33843854
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  33843807 caaacataaatcactttacatccaactcacttttagccagaatcaatt 33843854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 36150629 - 36150679
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattata 272  Q
    ||||||||||||| ||||||||||||||| |||||  || |||||||||||    
T  36150629 caaacataaatcactttacattcaactcacttttaatcaaaatcaattata 36150679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 24364169 - 24364105
Alignment:
Q  234 attttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||||||||||| ||| |||||   |||||||||| ||||||||||||| | | ||||||||||    
T  24364169 attttacattcaaatcacttttagtgagaatcaattttacataatcaattcattcaaaatcaatt 24364105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 27096606 - 27096562
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaac 247  Q
    ||||||| ||||||| ||||||||||||||||  |||||||||||    
T  27096606 acttttacataaatatattcaaacataaatcaccttacattcaac 27096562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 46508045 - 46507969
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatc 279  Q
    |||||| || ||| || ||||||||||||||| |||| |||| ||||| ||||||  |||||||||| |||| ||||    
T  46508045 acttttttacaaacacgttcaaacataaatcactttatattccactcacttttatttagaatcaattttacaaaatc 46507969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 298
Target Start/End: Original strand, 1499977 - 1500072
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatttactgaaaatcaatt 298  Q
    ||||||| ||||||  |||||||||||||||| |||||| |||||||  ||||| ||| |||||||| |||| |||||||| | | ||||||||||    
T  1499977 acttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaattttacaaaatcaattcagtcaaaatcaatt 1500072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 3525002 - 3525082
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||| ||||||  ||||||| ||||| || ||| ||||||||||| ||||| ||| |||||||| |||||||||||||    
T  3525002 acttttacataaatgtattcaaatataaaccagtttgcattcaactcacttttagccacaatcaattttacataatcaatt 3525082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 7953077 - 7953140
Alignment:
Q  220 ttcaaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||||| ||||| ||||||||| ||||  |||||||||||| | |||||||||||    
T  7953077 ttcaaacataaatcactttaccttcaactcaattttggccagaatcaatttttcataatcaatt 7953140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 579030 - 579087
Alignment:
Q  227 ataaatcattttacattcaac-tcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||| |||||||||||| |  |||||| ||||||||||||||||||||||||||    
T  579030 ataaatcactttacattcaaccttttttttagccagaatcaattatacataatcaatt 579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 20846420 - 20846457
Alignment:
Q  219 attcaaacataaatcattttacattcaactcattttta 256  Q
    |||||||||||||||||||||||||| |||||||||||    
T  20846420 attcaaacataaatcattttacattctactcattttta 20846457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 34073520 - 34073460
Alignment:
Q  223 aaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    |||||||||| | |||||||||||||||||||||  | ||||||||| |||||||| ||||    
T  34073520 aaacataaataactttacattcaactcatttttaagcggaatcaattttacataattaatt 34073460  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 882782 - 882829
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    ||||||||||||||||||| ||||||||| ||||| | ||||||||||    
T  882782 caaacataaatcattttaccttcaactcaattttaactagaatcaatt 882829  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 4894013 - 4894064
Alignment:
Q  205 ttttatataaatacattcaaacataaatcattttacattcaactcattttta 256  Q
    ||||| ||||||| |||||||||||||| ||||||| ||||||| |||||||    
T  4894013 ttttacataaatatattcaaacataaattattttaccttcaactaattttta 4894064  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 32888965 - 32888918
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaactca 250  Q
    ||||||| ||||||| |||||||||||||||||||||  |||||||||    
T  32888965 acttttacataaatatattcaaacataaatcattttatcttcaactca 32888918  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 3816435 - 3816378
Alignment:
Q  212 taaatacattcaaacataaatcattttacattcaactcatttttatccagaatcaatt 269  Q
    |||| |||| |||||||||| |   |||||||||||||| ||||||||||||||||||    
T  3816435 taaagacatccaaacataaagcgcattacattcaactcacttttatccagaatcaatt 3816378  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 25208723 - 25208756
Alignment:
Q  223 aaacataaatcattttacattcaactcattttta 256  Q
    |||||||||||||||||||||||||||| |||||    
T  25208723 aaacataaatcattttacattcaactcactttta 25208756  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 42986 - 42950
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatc 258  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  42986 caaacataagtcattttacattcaactcatttgtatc 42950  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 2494019 - 2493975
Alignment:
Q  203 acttttatataaatacattcaaacataaatcattttacattcaac 247  Q
    ||||||| ||||||| ||||||||||||||||  |||||||||||    
T  2494019 acttttacataaatatattcaaacataaatcaccttacattcaac 2493975  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 65540 - 65601
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| |||||||| |||||||||||| ||| ||||||||  ||| ||||||||    
T  65540 caaacataaatcactttacattaaactcatttttaaccaaaatcaatttcacagaatcaatt 65601  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 207061 - 207002
Alignment:
Q  213 aaatacattcaaacataaa-tcattttacattcaactcatttttatccagaatcaattat 271  Q
    ||||| || |||||||||| ||||||||||||||||||   |||||||||||||||||||    
T  207061 aaataaatccaaacataaaatcattttacattcaactcgaatttatccagaatcaattat 207002  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 15318 - 15257
Alignment:
Q  222 caaacataaatcattttacattcaactcatttttatccagaatcaattatacataatcaatt 283  Q
    ||||||||||||| |||| |||||||||| ||||| ||| ||||||||  ||| ||||||||    
T  15318 caaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaatt 15257  T

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