View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7877_high_8 (Length: 330)
Name: NF7877_high_8
Description: NF7877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7877_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 24159992 - 24160305
Alignment:
| Q |
1 |
atatcaggttttgtacgtcgaattctttctagggcttgtaaacttaaactatggtcatattttgtttaatcaagggattacttgatatttgatgcatatt |
100 |
Q |
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| T |
24159992 |
atatcaggttttgtacgtcgaattctttctagggcttgtaaacttaaactatggtcatattttgtttaatcaagggattacttgatatttgatgcatatt |
24160091 |
T |
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| Q |
101 |
ctgggtgtccctccaaaggtaacaataatacggattaatataaattaaaattaatgaaaacaataacacagatctgtatgtctataggtttatatattct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24160092 |
ctgggtgtccctccaaaggtaacaataatacggattaatataaattaaaattaatgaaaacaataacacagatctgtatgtctataggtttatatattct |
24160191 |
T |
|
| Q |
201 |
cttagcttaatgagtgtaggctcatctagggaaaatgctaaacttaatttatgtaacgtggagaatcaatgtttgaattttgacggtaaaagatgtccac |
300 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24160192 |
cttagcttaatcagtgtaggctcatctagggaaaatgctaaacttaacttatgtaacgtggagaatcaatgtttgaattttgacggtaaaagatgtccac |
24160291 |
T |
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| Q |
301 |
atatgtagtatttg |
314 |
Q |
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|||||||||||||| |
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| T |
24160292 |
atatgtagtatttg |
24160305 |
T |
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