View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7877_high_9 (Length: 323)
Name: NF7877_high_9
Description: NF7877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7877_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 308
Target Start/End: Original strand, 53426304 - 53426593
Alignment:
| Q |
19 |
gtttcgcacaatcctttgaaccgatggatgtttgataatgcagaattgtgaagcgctccagatacgttcaaccaacgcagaatcttatatcagatctcca |
118 |
Q |
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| T |
53426304 |
gtttcacacaatcctttgaaccgatggatgtttgataatgcagaattgtgaagcgctccagatacgttcaaccaactcagaatcttatatcagatctcca |
53426403 |
T |
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| Q |
119 |
tgtttaagttgcactcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426404 |
tgtttaagttgcactcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaata |
53426503 |
T |
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| Q |
219 |
agttatccttagtcataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgat |
308 |
Q |
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| T |
53426504 |
aattatccttagtcataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgat |
53426593 |
T |
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