View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7877_low_12 (Length: 305)
Name: NF7877_low_12
Description: NF7877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7877_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 35049091 - 35049358
Alignment:
| Q |
18 |
gtaatctatcgaggcctaacttctgatcattgtagaacgagaattatgatatgaaagttaccgaaacttatgcttcatttgtgttttagttaaatcaaaa |
117 |
Q |
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| T |
35049091 |
gtaacctatcgaggcctaacttccgatcattgtagaacgaaaattatgatatgaaagttaccgaaacttatgcttcatttgagttttagttaaatcaaaa |
35049190 |
T |
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| Q |
118 |
ttttccaaacattttccttaatccagcaagtgatttcatcgaacgatatcaaagatattgcatttgttgtgacatccttttaggttagggtttttgtgga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
35049191 |
ttttccaaacattttccttaatccagcaagtgatttcatcgaacgatatcaaagatattgcatttgttgtggcatccttttaggttagggtttttgtgga |
35049290 |
T |
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| Q |
218 |
atgtagatgtagtttagaaactttgtagttgttgactaagcaaaatgtgattgtgaagtatatgtatt |
285 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
35049291 |
atgtagatgtagtttagaaactttgtagttgttgattaagcaaaatgtgattgtgaagtatatgtatt |
35049358 |
T |
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