View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7880_low_12 (Length: 207)
Name: NF7880_low_12
Description: NF7880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7880_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 8563131 - 8563305
Alignment:
| Q |
16 |
aagaatgatctttgcatgtttaaatcagtgtagaatttcacaatctccagtgcaagagatttctctggaagatggagtgaagttttatccatgagctgat |
115 |
Q |
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| T |
8563131 |
aagaatgatctttgcatgtttaaatcagtgtagaatttcacaatctccagtgcaagagatttctctggaagatggagtgaagttttatccatgagctgat |
8563230 |
T |
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| Q |
116 |
atgttaaaaataacacatcaatatattagattcacatccacagaaacatacgttaatatattcgcataaacaagt |
190 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
8563231 |
atgttaaaaaaaacacatcaatatattagattcacatccacagaaacatacgttaatagattcgcataaacaagt |
8563305 |
T |
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