View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7881_high_1 (Length: 547)

Name: NF7881_high_1
Description: NF7881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7881_high_1
NF7881_high_1
[»] chr5 (18 HSPs)
chr5 (16-529)||(24545947-24546462)
chr5 (308-531)||(22865658-22865883)
chr5 (309-529)||(25537303-25537525)
chr5 (431-529)||(24647309-24647408)
chr5 (308-525)||(25828963-25829182)
chr5 (402-529)||(26994577-26994706)
chr5 (393-529)||(26348062-26348188)
chr5 (382-525)||(22903064-22903209)
chr5 (391-532)||(18803898-18804040)
chr5 (382-529)||(20025254-20025403)
chr5 (470-529)||(31202346-31202407)
chr5 (481-529)||(21213315-21213363)
chr5 (393-529)||(18799762-18799899)
chr5 (481-527)||(25679219-25679265)
chr5 (395-531)||(32418455-32418593)
chr5 (397-526)||(8938898-8939028)
chr5 (383-507)||(27083231-27083356)
chr5 (388-531)||(25333712-25333857)
[»] chr7 (25 HSPs)
chr7 (310-529)||(13292094-13292315)
chr7 (333-529)||(16987063-16987261)
chr7 (393-529)||(5925446-5925584)
chr7 (388-528)||(34854220-34854362)
chr7 (393-526)||(9135335-9135470)
chr7 (392-528)||(1979043-1979181)
chr7 (393-531)||(18773963-18774103)
chr7 (393-529)||(10287567-10287705)
chr7 (396-529)||(4781471-4781605)
chr7 (396-529)||(4813902-4814036)
chr7 (393-529)||(12644767-12644906)
chr7 (413-520)||(5928991-5929100)
chr7 (395-528)||(20034300-20034434)
chr7 (471-528)||(12265097-12265155)
chr7 (382-483)||(21161213-21161314)
chr7 (388-479)||(39879364-39879456)
chr7 (393-534)||(26762877-26763020)
chr7 (382-529)||(29373417-29373566)
chr7 (393-523)||(7486527-7486659)
chr7 (350-463)||(9867977-9868091)
chr7 (393-431)||(26562899-26562937)
chr7 (496-529)||(43172007-43172040)
chr7 (405-476)||(9573451-9573523)
chr7 (308-348)||(12265246-12265286)
chr7 (495-531)||(17150046-17150082)
[»] scaffold0002 (2 HSPs)
scaffold0002 (311-529)||(379616-379836)
scaffold0002 (437-529)||(120982-121075)
[»] chr3 (23 HSPs)
chr3 (308-525)||(12731536-12731755)
chr3 (309-527)||(12516083-12516303)
chr3 (388-529)||(14860070-14860213)
chr3 (308-529)||(25495836-25496058)
chr3 (394-528)||(9801056-9801191)
chr3 (431-529)||(16704423-16704522)
chr3 (393-527)||(1770807-1770944)
chr3 (431-529)||(30606949-30607048)
chr3 (382-534)||(431282-431436)
chr3 (383-522)||(2311812-2311953)
chr3 (414-531)||(17143718-17143837)
chr3 (382-510)||(17485614-17485744)
chr3 (488-529)||(20118948-20118989)
chr3 (480-529)||(20122750-20122799)
chr3 (393-527)||(21342260-21342396)
chr3 (490-528)||(12108500-12108538)
chr3 (482-526)||(17396796-17396840)
chr3 (492-534)||(20622491-20622533)
chr3 (438-523)||(28715465-28715551)
chr3 (382-457)||(21649384-21649460)
chr3 (401-455)||(8122960-8123015)
chr3 (440-492)||(9781514-9781567)
chr3 (437-492)||(12252015-12252071)
[»] chr4 (19 HSPs)
chr4 (316-534)||(15742119-15742339)
chr4 (388-528)||(15514533-15514675)
chr4 (397-534)||(14601981-14602120)
chr4 (395-534)||(5518524-5518665)
chr4 (308-529)||(16012443-16012664)
chr4 (393-529)||(12683767-12683905)
chr4 (394-527)||(1638291-1638425)
chr4 (383-529)||(47253249-47253397)
chr4 (382-531)||(19643673-19643824)
chr4 (395-526)||(13896453-13896586)
chr4 (393-529)||(17110680-17110817)
chr4 (393-529)||(29157084-29157222)
chr4 (437-529)||(25066171-25066264)
chr4 (394-527)||(19563945-19564079)
chr4 (399-529)||(19809689-19809821)
chr4 (397-466)||(13171065-13171135)
chr4 (467-529)||(18463857-18463920)
chr4 (492-531)||(50151773-50151812)
chr4 (481-526)||(12415507-12415552)
[»] chr6 (37 HSPs)
chr6 (311-527)||(19730564-19730781)
chr6 (310-527)||(9403076-9403290)
chr6 (336-529)||(12449554-12449749)
chr6 (316-529)||(31295506-31295721)
chr6 (382-534)||(27860914-27861068)
chr6 (397-529)||(34064181-34064315)
chr6 (442-529)||(19277047-19277135)
chr6 (393-528)||(34187281-34187413)
chr6 (382-526)||(22497272-22497418)
chr6 (394-529)||(12424285-12424422)
chr6 (394-528)||(16343562-16343698)
chr6 (393-528)||(20148299-20148434)
chr6 (393-528)||(22184394-22184529)
chr6 (382-526)||(12487970-12488116)
chr6 (394-523)||(23768176-23768307)
chr6 (393-529)||(19305446-19305584)
chr6 (383-480)||(19331701-19331799)
chr6 (482-527)||(14184529-14184574)
chr6 (437-529)||(16130995-16131088)
chr6 (394-529)||(22572028-22572164)
chr6 (393-528)||(9277273-9277409)
chr6 (481-529)||(13823349-13823397)
chr6 (393-527)||(18147288-18147424)
chr6 (393-529)||(9291991-9292128)
chr6 (431-531)||(14921230-14921331)
chr6 (438-529)||(18566685-18566777)
chr6 (481-529)||(18994051-18994099)
chr6 (394-476)||(25008415-25008498)
chr6 (401-529)||(689829-689958)
chr6 (393-529)||(33596843-33596981)
chr6 (382-462)||(30680963-30681044)
chr6 (344-424)||(31423906-31423986)
chr6 (437-535)||(3404827-3404926)
chr6 (437-531)||(17380124-17380219)
chr6 (495-534)||(31423803-31423842)
chr6 (391-483)||(14080464-14080556)
chr6 (492-528)||(27772537-27772573)
[»] chr1 (23 HSPs)
chr1 (307-528)||(14255014-14255225)
chr1 (308-525)||(4601462-4601681)
chr1 (397-529)||(23728791-23728925)
chr1 (393-532)||(25408078-25408219)
chr1 (393-529)||(26977722-26977860)
chr1 (393-527)||(12177368-12177504)
chr1 (393-527)||(21098819-21098954)
chr1 (308-534)||(16299547-16299767)
chr1 (394-531)||(21682559-21682698)
chr1 (382-532)||(52565551-52565703)
chr1 (393-527)||(1659762-1659898)
chr1 (395-529)||(3590811-3590947)
chr1 (393-528)||(22414757-22414894)
chr1 (393-524)||(18246125-18246257)
chr1 (393-527)||(34273069-34273205)
chr1 (382-527)||(16050365-16050512)
chr1 (482-529)||(48637612-48637659)
chr1 (402-483)||(5671761-5671843)
chr1 (401-483)||(33101525-33101608)
chr1 (395-464)||(16522759-16522829)
chr1 (397-480)||(48637537-48637621)
chr1 (382-535)||(8018920-8019074)
chr1 (309-362)||(29217657-29217710)
[»] chr2 (26 HSPs)
chr2 (308-529)||(15390556-15390779)
chr2 (308-529)||(15825052-15825274)
chr2 (388-529)||(29710995-29711136)
chr2 (339-529)||(18135799-18135991)
chr2 (344-528)||(19050407-19050593)
chr2 (344-529)||(3586296-3586483)
chr2 (395-534)||(24157272-24157413)
chr2 (308-534)||(10923131-10923359)
chr2 (308-480)||(29137798-29137971)
chr2 (393-529)||(12168954-12169093)
chr2 (388-529)||(19919037-19919180)
chr2 (394-531)||(36267481-36267620)
chr2 (399-531)||(24499777-24499911)
chr2 (382-483)||(45714966-45715068)
chr2 (393-527)||(20120329-20120465)
chr2 (382-527)||(45258125-45258272)
chr2 (398-526)||(18772239-18772365)
chr2 (393-529)||(24318895-24319032)
chr2 (399-507)||(27846512-27846622)
chr2 (431-535)||(23257803-23257907)
chr2 (395-483)||(18770296-18770387)
chr2 (487-526)||(19290545-19290584)
chr2 (388-483)||(12127681-12127777)
chr2 (431-507)||(18134339-18134418)
chr2 (382-424)||(17671944-17671986)
chr2 (392-424)||(17626882-17626914)
[»] scaffold0380 (1 HSPs)
scaffold0380 (348-529)||(6831-7014)
[»] scaffold0205 (2 HSPs)
scaffold0205 (297-526)||(10889-11120)
scaffold0205 (394-527)||(22869-23004)
[»] scaffold0013 (1 HSPs)
scaffold0013 (391-528)||(4396-4535)
[»] scaffold0005 (1 HSPs)
scaffold0005 (397-534)||(215258-215397)
[»] chr8 (22 HSPs)
chr8 (394-528)||(24576555-24576691)
chr8 (393-525)||(4565368-4565502)
chr8 (333-527)||(21416660-21416856)
chr8 (306-527)||(11776216-11776431)
chr8 (344-527)||(24507391-24507575)
chr8 (399-531)||(30477629-30477763)
chr8 (400-529)||(3459455-3459586)
chr8 (461-525)||(23243835-23243900)
chr8 (469-529)||(20055623-20055683)
chr8 (399-528)||(13754746-13754877)
chr8 (437-529)||(17698256-17698349)
chr8 (393-465)||(23269228-23269301)
chr8 (383-528)||(18322915-18323062)
chr8 (393-529)||(14666811-14666948)
chr8 (308-430)||(20055476-20055598)
chr8 (437-521)||(6928069-6928154)
chr8 (394-465)||(1909744-1909816)
chr8 (383-529)||(26916869-26917017)
chr8 (391-457)||(17927748-17927815)
chr8 (399-480)||(13764977-13765059)
chr8 (382-459)||(15058006-15058084)
chr8 (495-529)||(16214713-16214747)
[»] scaffold0140 (1 HSPs)
scaffold0140 (348-529)||(6235-6418)
[»] scaffold0103 (1 HSPs)
scaffold0103 (391-531)||(40776-40918)
[»] scaffold0464 (1 HSPs)
scaffold0464 (308-525)||(11413-11628)
[»] scaffold0294 (1 HSPs)
scaffold0294 (419-529)||(213-326)
[»] scaffold0092 (1 HSPs)
scaffold0092 (394-526)||(21592-21726)
[»] scaffold0479 (1 HSPs)
scaffold0479 (308-527)||(4937-5156)
[»] scaffold0096 (1 HSPs)
scaffold0096 (393-528)||(42231-42367)
[»] scaffold0360 (1 HSPs)
scaffold0360 (393-527)||(13904-14040)
[»] scaffold0291 (1 HSPs)
scaffold0291 (417-527)||(15403-15515)
[»] scaffold0101 (1 HSPs)
scaffold0101 (319-463)||(10756-10903)
[»] scaffold0074 (2 HSPs)
scaffold0074 (344-483)||(35186-35326)
scaffold0074 (481-529)||(53244-53292)
[»] scaffold0054 (1 HSPs)
scaffold0054 (411-528)||(68774-68891)
[»] scaffold0023 (1 HSPs)
scaffold0023 (386-528)||(95782-95926)
[»] scaffold0438 (1 HSPs)
scaffold0438 (308-377)||(4280-4349)
[»] scaffold0518 (1 HSPs)
scaffold0518 (394-528)||(8954-9093)
[»] scaffold0505 (1 HSPs)
scaffold0505 (393-483)||(7867-7958)
[»] scaffold0263 (1 HSPs)
scaffold0263 (431-529)||(20468-20567)
[»] scaffold0022 (1 HSPs)
scaffold0022 (393-444)||(69281-69333)


Alignment Details
Target: chr5 (Bit Score: 430; Significance: 0; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 16 - 529
Target Start/End: Original strand, 24545947 - 24546462
Alignment:
Q  16 caattaacaatatcttccatggggattctcctttgtgaatgagatcctctatgctcatgttcaccaataataatattgtaatcaacaatataacaccaaa 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24545947 caattaacaatatcttcaatggggattctcctttgtgaatgagatcctctatgctcatgttcaccaataataatattgtaatcaacaatataacaccaaa 24546046  T
Q  116 ggtatgttatgatttaattgaagttgacttaatgaatttcatatttgccttcttttaatatagttaacaaaagcataaattgcagttatgtcaaaagtaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24546047 ggtatgttatgatttaattgaagttgacttaatgaatttcatatttgccttcttttaatatagttaacaaaagcataaattggagttatgtcaaaagtaa 24546146  T
Q  216 tatagtattattttctgatatagt----gaaacaaattgcttagctatttcaactatgacattattcaggttcaaagagcatacatgatctattcagtga 311  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  24546147 tatagtattattttctgatatagtgaaagaaacaaattgcttagctatttcaactatgacattattcaggttcaaagagcatacatgatctatccggtga 24546246  T
Q  312 gaacggttgagttgcaatagcggcagagaattctccggtgtgac-ggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtc 410  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  24546247 gaacggttgagttacaatagcggcagcgaattctccggtgtgacgggtaatggctttcggcacggcaacagtgagtcttcatggtggaacgaaaggtgtc 24546346  T
Q  411 tgcaggcacgttagaactccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtgtaccttgagggtgaagc-a 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  24546347 tgcaggcacgttagaactccacgctaaagtcagtaatggaattg----agagtgtataagaagtgttgtgaaagtgatgtgtaccttgaaggtgaagcaa 24546442  T
Q  510 agttcacccttatataggcg 529  Q
    ||||||||||||||||||||    
T  24546443 agttcacccttatataggcg 24546462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 531
Target Start/End: Original strand, 22865658 - 22865883
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    ||||||||  |||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||   |     || ||||  ||||||||||||||    
T  22865658 gtgagaacaattgagtagcaacggcggcagagaatgctccggtgtgacggtaacggctttcggcacggtggcgacatgtcttcgcagtggaacgaaaggt 22865757  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    |  |||||| ||||||| |||   ||||| |||| |||||||||| ||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  22865758 gcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaaagtgatgtgtaccttgagggtga 22865857  T
Q  506 agcaagttcacccttatataggcgtg 531  Q
    ||||||||||||||||||||||||||    
T  22865858 agcaagttcacccttatataggcgtg 22865883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 309 - 529
Target Start/End: Original strand, 25537303 - 25537525
Alignment:
Q  309 tgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtg 408  Q
    ||||||||||||| | ||||  |||| ||||||| ||| |||||||||||||||| ||  ||||||||  |   |||| |||| ||||||||||||||||    
T  25537303 tgagaacggttgaatggcaacggcggaagagaatgctctggtgtgacggtaacggtttctggcacggcggcgaagagtcttcgcggtggaacgaaaggtg 25537402  T
Q  409 tctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaa 506  Q
     ||||| ||||||||| |||||| |||| |||   ||||||||| ||||||||| ||| || |||||||||||||| ||||||| |||||||||||||||    
T  25537403 cctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagattgtgtatgaagtgttgtgaaaagtgatgtataccttgagggtgaa 25537502  T
Q  507 gcaagttcacccttatataggcg 529  Q
    | |||||||||||||||||||||    
T  25537503 gaaagttcacccttatataggcg 25537525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 529
Target Start/End: Original strand, 24647309 - 24647408
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| || |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  24647309 acgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtataccttaagggtgaagcaagttcacccttatataggcg 24647408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 25829182 - 25828963
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    ||||||||| |||| | |||| || |||||||||| |||  | |||||||||||  ||||||||||||   |  | ||| |||| ||| |||| ||| ||    
T  25829182 gtgagaacgattgattagcaacagtggcagagaatactctagggtgacggtaactactttcggcacggtggcgataagtcttcgcggttgaacaaaatgt 25829083  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    || | |||||||||||| | ||  |||||  ||||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||| ||||||||||||    
T  25829082 gtattcaggcacgttagcaatctgacgctctagtcaataatggaattgagaaaaagtgtgtaagaagtattgtgaaaagtgatgtgtcccttgagggtga 25828983  T
Q  506 agcaagttcacccttatata 525  Q
    | ||||||||||| ||||||    
T  25828982 aacaagttcacccgtatata 25828963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 529
Target Start/End: Complemental strand, 26994706 - 26994577
Alignment:
Q  402 aaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttga 499  Q
    |||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||  | |||||||| |||||||    |||||||     
T  26994706 aaaggtgtcttcagacacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatcataccttgg 26994607  T
Q  500 gggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||||| |||||||||||||||||    
T  26994606 gggtgaagcaaggtcacccttatataggcg 26994577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 26348188 - 26348062
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||||| |||||||| | | | |||  || ||||||||||||||               
T  26348188 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcattaatggaactaaaagagatagtgtaagaagtgttgtg----------- 26348100  T
Q  492 taccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26348099 taccttgagggtgaagcaagttcacccttatataggcg 26348062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 22903064 - 22903209
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||||| ||||||||||||||| |  | ||||| ||||| ||| || |||| ||||||||||||||| ||||||||||||| ||  ||||||||||    
T  22903064 tgagttttcgcggtggaacgaaaggttttcgtaggcatgttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 22903163  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatata 525  Q
     |||||||    ||||||||||||||| |||  |||||||||||||    
T  22903164 aaaagtgaatcataccttgagggtgaaacaatatcacccttatata 22903209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 391 - 532
Target Start/End: Original strand, 18803898 - 18804040
Alignment:
Q  391 gtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagt-gat 488  Q
    |||||||||||||||||| ||| || |||||||| |||||| || | || |||||||||||||||||| | | | | | |  || ||||||||| | | |    
T  18803898 gtggtggaacgaaaggtgcctgaagacacgttagcactccaacgattaattcagtaatggaattgagagaaaat-tctcatgagagttgtgaaaattgtt 18803996  T
Q  489 gtgtaccttgagggtgaagcaagttcacccttatataggcgtgt 532  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  18803997 gtgtaccttgagggtgaagcaatttcacccgtatataggcgtgt 18804040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 529
Target Start/End: Original strand, 20025254 - 20025403
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| ||||| ||||||||||||||||  |||||||  |||||| |||||  ||||| |||| || ||||||||||||| ||  ||||||||||    
T  20025254 tgagtcttcgcggtgggacgaaaggtgtctgcacacacgttaacactccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgttgtg 20025353  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     |||||||    | ||||||||||||||| || ||||||||||| |||||    
T  20025354 taaagtgaatcattccttgagggtgaagctaggtcacccttatacaggcg 20025403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 470 - 529
Target Start/End: Complemental strand, 31202407 - 31202346
Alignment:
Q  470 gaagtgttgtg-aaagtgatg-tgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  31202407 gaagtgttgtggaaagtgataatgtaccttgagggtgaagcaagttcacccttatataggcg 31202346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 481 - 529
Target Start/End: Original strand, 21213315 - 21213363
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  21213315 aaagtgttgtgtagcttgagggtgaagcaagttcacccttatataggcg 21213363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 18799762 - 18799899
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgaga-aagagtgtataagaagtgttgtgaaa-gtgatg 489  Q
    ||||||||||||| |  |||||| |||||||| ||||| ||| | ||||||||||||||| ||||| || ||| | || || | ||||||||| ||| ||    
T  18799762 ggtggaacgaaagattcctgcagtcacgttagcactccgacgatcaagtcagtaatggaactgagagaaaagt-tctagga-gagttgtgaaaagtgttg 18799859  T
Q  490 tgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  18799860 tgtaccttgatgatgaagcaagttcacccttatataggcg 18799899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 527
Target Start/End: Complemental strand, 25679265 - 25679219
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||    
T  25679265 aaagtgttgtctagcttgagggtgaagcaagttcacccttatatagg 25679219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 32418593 - 32418455
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaa-agtgatgtgt 492  Q
    |||||||||||| | |||||||||||| |  ||||  ||||| |||||| | ||||||  |||||||||||| ||   ||||||||||| |||||    |    
T  32418593 tggaacgaaaggagcctgcaggcacgtcaacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcat 32418494  T
Q  493 accttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||| |||||||||||||||||| ||||| ||||    
T  32418493 accttgaggatgaagcaagttcacccttgtatagacgtg 32418455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 526
Target Start/End: Original strand, 8938898 - 8939028
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtgtacc 495  Q
    ||||||||||||  |||||||||||||  ||||||  |||  |||||||| ||||| ||||||||||||| ||| |||||| |  |||||||    |||     
T  8938898 gaacgaaaggtgcatgcaggcacgttaacactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgggaaaagtgaatcataca 8938997  T
Q  496 ttgagggtgaagcaagttcacccttatatag 526  Q
    ||||||||||||| |  ||||| ||||||||    
T  8938998 ttgagggtgaagctaagtcaccgttatatag 8939028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 507
Target Start/End: Complemental strand, 27083356 - 27083231
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga 481  Q
    |||| |||| ||| |||||||| |||||||||| |||||||| |||||| | || |||||||||| | || || |||||||||| ||  |||||||||||    
T  27083356 gagtcttcgcggtagaacgaaatgtgtctgcagacacgttagcactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtagaaagtgttgtga 27083258  T
Q  482 aa-gtgatgtgtaccttgagggtgaag 507  Q
    || ||||    ||||||||||||||||    
T  27083257 aaagtgaatcataccttgagggtgaag 27083231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 531
Target Start/End: Original strand, 25333712 - 25333857
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gt 485  Q
    |||| |||||| ||||||||   ||||||||  |||| ||||| ||||| |||||||||||| || | ||| ||||||| ||  ||||||||| ||| ||    
T  25333712 ttcgcggtggagcgaaaggtacttgcaggcatattagtactccgacgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaagt 25333811  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||    ||| ||||| ||||||||||||||| |||||||| |||||    
T  25333812 gaatcatactttgagagtgaagcaagttcactcttatataagcgtg 25333857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 9e-53; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 310 - 529
Target Start/End: Complemental strand, 13292315 - 13292094
Alignment:
Q  310 gagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgt 409  Q
    ||||||||| ||||  |||  |||||||||||| ||||| |||||||||||| | || |||||||||  |  ||||| |||||||||||| |||||||||    
T  13292315 gagaacggtcgagtgacaacggcggcagagaatgctccgatgtgacggtaacagtttccggcacggcggcgatgagtcttcgtggtggaaggaaaggtgt 13292216  T
Q  410 ctgcaggcacgttagaactc-cacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaag 507  Q
    ||||||| ||||||| ||||  ||||| |||||||||||| || ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  13292215 ctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaag 13292116  T
Q  508 caagttcacccttatataggcg 529  Q
    |||||||||| |||||||||||    
T  13292115 caagttcaccattatataggcg 13292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 333 - 529
Target Start/End: Complemental strand, 16987261 - 16987063
Alignment:
Q  333 ggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactc-ca 431  Q
    |||||||||| ||||||||||||| |||||||||  || |||||  || ||||| |||| ||||||||||||||||  ||| |||||||||| ||||  |    
T  16987261 ggcagagaatgctccggtgtgacgctaacggcttctggtacggcggcaatgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctga 16987162  T
Q  432 cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    | || ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||||||    
T  16987161 cactcaagccagtaatggaattgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtcccttaaaggtgaagcaagttcacccttatataggcg 16987063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 5925584 - 5925446
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||| ||||| |||  || |||||||||| |||||| ||| |||    
T  5925584 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagagagaaagtctaagaagtgtcgtgaaaagtgttgt 5925485  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    || ||||||||||||||||||||||||||||| ||||||    
T  5925484 gttccttgagggtgaagcaagttcacccttatgtaggcg 5925446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 388 - 528
Target Start/End: Original strand, 34854220 - 34854362
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gt 485  Q
    |||||||||||||||| ||||| ||||| |||||||| ||||  ||||| |||| ||||||| || ||||||||||||| |||||| |||||||||| ||    
T  34854220 ttcgtggtggaacgaacggtgtttgcagacacgttagcactctgacgctcaagttagtaatgaaactgagaaagagtgtgtaagaaatgttgtgaaaagt 34854319  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||  |||||||||| |||||||||||||||||||||    
T  34854320 gatgtgtactctgagggtgaaacaagttcacccttatataggc 34854362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 393 - 526
Target Start/End: Complemental strand, 9135470 - 9135335
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    ||||||||||||||||  |  ||||||||||| |||| | |||| ||||||||||||||||||||||||||||| ||| || ||||||| |||||||       
T  9135470 ggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaactgttgtgaaaagtgaatc 9135371  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatag 526  Q
     ||||||||||||||||||| |||||||||||||||    
T  9135370 ataccttgagggtgaagcaaattcacccttatatag 9135335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 528
Target Start/End: Original strand, 1979043 - 1979181
Alignment:
Q  392 tggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaa-agtgatg 489  Q
    ||||| ||||||||||| ||||| ||||||||| ||||  ||||| ||||||||||||||| ||||| |||  || |||||||||||||||| |||| ||    
T  1979043 tggtgaaacgaaaggtgcctgcaagcacgttagtactctgacgctcaagtcagtaatggaactgagagagaaagtctaagaagtgttgtgaagagtgttg 1979142  T
Q  490 tgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||  ||| | |||||||||||||||| ||||||||||    
T  1979143 tgtatattgggagtgaagcaagttcacctttatataggc 1979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 531
Target Start/End: Original strand, 18773963 - 18774103
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    ||||||||||||||||  |||||||||||||| ||| | ||| | || |||||||||||| ||||| |||  ||  ||||||||| |||||| ||| |||    
T  18773963 ggtggaacgaaaggtgcatgcaggcacgttagcacttcgacgatcaaatcagtaatggaactgagagagaaagtcaaagaagtgtagtgaaaagtgttgt 18774062  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  18774063 gtaccttgagggtgaaacaaattcacccttatatagacgtg 18774103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 10287705 - 10287567
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaac-tccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||| ||||||  ||||||||||||||| || |  ||||| ||||||||||||||  ||||||| ||||| |||||||||||||| |||||||       
T  10287705 ggtggaaccaaaggttcctgcaggcacgttagcaccttaacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtgagag 10287606  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     ||||||||||||| | |||||| |||||||||||||||    
T  10287605 ataccttgagggtgtaacaagtttacccttatataggcg 10287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 529
Target Start/End: Complemental strand, 4781605 - 4781471
Alignment:
Q  396 ggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgta 493  Q
    ||||||||||||| || | ||||||||||  |||  ||| | ||||||||||||||||||||| | |  || | || || |||||| |||||| ||||||    
T  4781605 ggaacgaaaggtgcctcctggcacgttagccctctgacgatcaagtcagtaatggaattgagataaaa-gtcttaggagagttgtgtaaagtgttgtgta 4781507  T
Q  494 ccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||    
T  4781506 ccttgagggtgaagcaagttcacccttatataggcg 4781471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 529
Target Start/End: Complemental strand, 4814036 - 4813902
Alignment:
Q  396 ggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgta 493  Q
    ||||||||||||| || | ||||||||||  |||  ||| | ||||||||||||||||||||| | |  || | || || |||||| |||||| ||||||    
T  4814036 ggaacgaaaggtgcctcctggcacgttagccctctgacgatcaagtcagtaatggaattgagataaaa-gtcttaggagagttgtgtaaagtgttgtgta 4813938  T
Q  494 ccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||    
T  4813937 ccttgagggtgaagcaagttcacccttatataggcg 4813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 12644767 - 12644906
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttg-tgaaa-gtgatg 489  Q
    ||||||||||||||||  |||||||| ||||| ||||| ||||| | ||||||||||||| ||||||| ||||| |   |||||||| ||||| ||||      
T  12644767 ggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttggtgaaaagtgaat 12644866  T
Q  490 tgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| ||||||||||||||||||||||||| || |||||    
T  12644867 tgtacgttgagggtgaagcaagttcacccttgtagaggcg 12644906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 5929100 - 5928991
Alignment:
Q  413 caggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaa 510  Q
    ||||||| |||| |||||| | || ||||||||||||||| ||| | |||| || ||||||||||||||||| ||||||||| ||||| |||||||||||    
T  5929100 caggcacattagcactccaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgtgtcccttgggggtgaagcaa 5929001  T
Q  511 gttcaccctt 520  Q
     |||||||||    
T  5929000 attcaccctt 5928991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 528
Target Start/End: Original strand, 20034300 - 20034434
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgt 492  Q
    |||||||||||||| |||||| |||||| ||| ||| ||  | ||||||||||||||| ||||| | |  || | |||||||| |||||| ||| |||||    
T  20034300 tggaacgaaaggtgcctgcagacacgtttgaattccgacaatcaagtcagtaatggaactgagagaaaa-gttttagaagtgtagtgaaaagtgttgtgt 20034398  T
Q  493 accttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||| |||||||| |||||||||||||||    
T  20034399 accttgagggtaaagcaagtacacccttatataggc 20034434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 471 - 528
Target Start/End: Complemental strand, 12265155 - 12265097
Alignment:
Q  471 aagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  12265155 aagtgttgtgaaaagtgatgcgtaccttgagggtcaagcaagttcacccttatataggc 12265097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 21161213 - 21161314
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| ||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||  | |||||| |||| ||  ||||||||||    
T  21161213 tgagtcttcgcggtggaacgaaag-tgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtg 21161311  T
Q  481 aaa 483  Q
    |||    
T  21161312 aaa 21161314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 479
Target Start/End: Original strand, 39879364 - 39879456
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaac-tccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgt 479  Q
    ||||||||||||||||||||| |||||| |||||||  || |  ||||| |||||||||||| || ||||||||||||| ||| |||||||||    
T  39879364 ttcgtggtggaacgaaaggtgcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgt 39879456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 534
Target Start/End: Complemental strand, 26763020 - 26762877
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||| ||||||||   |||||||||||||| |||||| |||| |||||||||| |||| | | ||| ||||| ||  ||||||||||||| ||||       
T  26763020 ggtggagcgaaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaaaagtgaatc 26762921  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
     ||||||||||||||||||||  ||||| |||||||||| ||||    
T  26762920 ataccttgagggtgaagcaaggacacccatatataggcgcgtgt 26762877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 529
Target Start/End: Original strand, 29373417 - 29373566
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||| | |||| |||||||||||  |||||||| ||||| ||||| | ||| ||||||||  || |||||||||||||||| ||  || |||||||    
T  29373417 tgagtttttgcggtgaaacgaaaggtgcatgcaggcatgttaggactccaatgctcaagtcagttgtgtaattgagaaagagtgtgtagaaaatgttgtg 29373516  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     ||| |||    |||||||||||||||||||  ||||||| |||||||||    
T  29373517 aaaattgaatcataccttgagggtgaagcaatgtcaccctcatataggcg 29373566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 7486527 - 7486659
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    ||||||| ||||||||  |||||||||||||| ||||| ||||| || |||||||||||| ||||||||| ||| ||  | |||||||| |||||||       
T  7486527 ggtggaatgaaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtgaatc 7486626  T
Q  491 gtaccttgagggtgaagcaagttcacccttata 523  Q
     | |||| | ||||||| |||||||||||||||    
T  7486627 atcccttaaaggtgaagaaagttcacccttata 7486659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 9868091 - 9867977
Alignment:
Q  350 tgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatg 448  Q
    ||||||||||||||||| | | |||||  |   |||| |||| ||||| ||||||||||  |||||| ||||||| ||||  ||||| ||||||||||||    
T  9868091 tgtgacggtaacggcttccagaacggcggcgacgagtcttcgcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatg 9867992  T
Q  449 gaattgagaaagagt 463  Q
    ||| |||| ||||||    
T  9867991 gaactgaggaagagt 9867977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 26562899 - 26562937
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca 431  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  26562899 ggtggaacgaaaggtgtctgcaggcacattagcactcca 26562937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 529
Target Start/End: Complemental strand, 43172040 - 43172007
Alignment:
Q  496 ttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||| ||||||||||||||||||    
T  43172040 ttgagggtgaagcaacttcacccttatataggcg 43172007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 476
Target Start/End: Complemental strand, 9573523 - 9573451
Alignment:
Q  405 ggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgt 476  Q
    |||| ||||||||||||||| |||||| |||  |||||| ||  |||| ||||||||||||| ||||||||||    
T  9573523 ggtgcctgcaggcacgttagcactccaacgcacaagtcaatatgggaactgagaaagagtgtgtaagaagtgt 9573451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 12265286 - 12265246
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccg 348  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  12265286 gtgagaacggttgagtcgcaatggcggcagagaatgctccg 12265246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 531
Target Start/End: Original strand, 17150046 - 17150082
Alignment:
Q  495 cttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  17150046 cttgagggtgaagcaagttaacccctatataggcgtg 17150082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 311 - 529
Target Start/End: Original strand, 379616 - 379836
Alignment:
Q  311 agaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtc 410  Q
    ||||||||||||| |||| || |||||||||| |||||||||||| ||||| |||| ||| ||||| ||  ||||| |||| ||||||||||||||||      
T  379616 agaacggttgagtggcaacagtggcagagaatgctccggtgtgactgtaacagcttccggtacggcgacgatgagtcttcgcggtggaacgaaaggtgca 379715  T
Q  411 tgcaggcacgttagaac-tccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagc 508  Q
    |  ||||||||||| || |  || || ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  379716 tctaggcacgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagc 379815  T
Q  509 aagttcacccttatataggcg 529  Q
    |||||||||| ||||||||||    
T  379816 aagttcacccgtatataggcg 379836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 437 - 529
Target Start/End: Complemental strand, 121075 - 120982
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  121075 aagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaaattcacccttatataggcg 120982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 12731755 - 12731536
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| |||| |||||||||||||  | |||||||||||||| ||||| |||||||||  |   |||| |||| ||||||||||| |||    
T  12731755 gtgagaacggttgagtagcaacagcggcagagaatgtttcggtgtgacggtaaaggcttccggcacggcggcgaagagtcttcgaggtggaacgaatggt 12731656  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    | || ||  || ||||| ||||| ||||| | |||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12731655 gcctacaaccatgttagtactccgacgctcacgtcattaatggaactgagaaagagtgtataagaagtgttgtgaaaagtgatgtgaaccttgagggtga 12731556  T
Q  506 agcaagttcacccttatata 525  Q
    ||||||||||||||||||||    
T  12731555 agcaagttcacccttatata 12731536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 309 - 527
Target Start/End: Original strand, 12516083 - 12516303
Alignment:
Q  309 tgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtg 408  Q
    ||||||||||||||| |||| ||||| ||||||| || |||||||| || |||| ||| | ||||| | ||  | ||| ||| ||||| |||||||||||    
T  12516083 tgagaacggttgagtggcaacagcggtagagaatgcttcggtgtgatggcaacgacttccagcacgacgacgatcagtcttcatggtgaaacgaaaggtg 12516182  T
Q  409 tctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaa 506  Q
     |||||| |||||||| ||||| ||||| |||| |||||||||| ||||||||| ||| ||| ||||||||||||| ||||| |||||||||||||||||    
T  12516183 cctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatatgtaccttgagggtgaa 12516282  T
Q  507 gcaagttcacccttatatagg 527  Q
    ||||||||||| |||||||||    
T  12516283 gcaagttcacctttatatagg 12516303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 388 - 529
Target Start/End: Complemental strand, 14860213 - 14860070
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gt 485  Q
    |||||||||||||||||||||  ||||||||| |||| ||||  |  || || |||||||||||| ||||||| ||| | ||||||||||||||||| ||    
T  14860213 ttcgtggtggaacgaaaggtgcttgcaggcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaagtgttgtgaaaagt 14860114  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14860113 gatgtgtaccttgagggtgaagcaagttcacccttatataggcg 14860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 308 - 529
Target Start/End: Original strand, 25495836 - 25496058
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    ||||||||  |||||| ||||  ||| ||||||||  |||||||||||||||||||||| ||||||| |     ||| | |||| |||||  || |||||    
T  25495836 gtgagaacaattgagtggcaacggcgacagagaatgttccggtgtgacggtaacggcttccggcacgacggtgatgattcttcgcggtggggcgtaaggt 25495935  T
Q  408 gtctgcaggcacgttagaactccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaa 506  Q
    | |||||| |||||||| ||||    || |||||||||||  || ||||||||||||| ||||||| ||||  ||| |||||||||||||| | ||||||    
T  25495936 gcctgcagacacgttagcactctgacctcaagtcagtaatcaaactgagaaagagtgtgtaagaagagttgaaaaaagtgatgtgtaccttaaaggtgaa 25496035  T
Q  507 gcaagttcacccttatataggcg 529  Q
    |||||||||||||||||||||||    
T  25496036 gcaagttcacccttatataggcg 25496058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 528
Target Start/End: Complemental strand, 9801191 - 9801056
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgt 492  Q
    ||||||||||||||| ||||| ||||||||| |||| || || ||||||||||| |||  |||||||||||| ||  |||||||||| |||||||    |    
T  9801191 gtggaacgaaaggtgcctgcaagcacgttagcactcaacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaaaagtgaatcat 9801092  T
Q  493 accttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||||||||  ||||||||||||||||    
T  9801091 accttgagggtgaagcaatgtcacccttatataggc 9801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 431 - 529
Target Start/End: Original strand, 16704423 - 16704522
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| |||||||||||||| ||||||||||| || ||  ||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||    
T  16704423 acgctgaagtcagtaatggagttgagaaagagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcg 16704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 1770807 - 1770944
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatg- 489  Q
    ||||||| |||||||||||||| ||| ||||| ||||| ||||| |||| |||||||||| |||| |||||||| ||  ||||||||||||| |||||      
T  1770807 ggtggaaggaaaggtgtctgcaagcatgttagtactccgacgctcaagttagtaatggaactgaggaagagtgtgtagaaagtgttgtgaaaagtgatca 1770906  T
Q  490 tgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
    ||  |||||||| |||||||||||| ||||||||||||    
T  1770907 tgcgccttgaggatgaagcaagttcgcccttatatagg 1770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 529
Target Start/End: Original strand, 30606949 - 30607048
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| ||||||||||||||||||||||||||||  ||  |||||||||| |||||||  | |||||||||||||||| |||  ||||||||||||||||    
T  30606949 acgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaagtaaggccacccttatataggcg 30607048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 534
Target Start/End: Complemental strand, 431436 - 431282
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| ||||||| |||||||| || ||| |||||||| ||| | ||||| |||||| |||||||| ||||||||||||  |   ||||| ||||    
T  431436 tgagtcttcgcggtggaaagaaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctgtg 431337  T
Q  481 aaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||| ||||  ||| |||||||||||||||| || |||||||||||||||| ||||    
T  431336 aaaagtgaattgtcccttgagggtgaagcatgtccacccttatataggcgcgtgt 431282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 522
Target Start/End: Complemental strand, 2311953 - 2311812
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga 481  Q
    |||| |||||||||||| |||||||||||||||  ||||||| |||||| |||| || |||| || ||| |||||||||| ||| ||  |||||||||||    
T  2311953 gagtcttcgtggtggaatgaaaggtgtctgcagatacgttagcactccaacgctcaaatcagcaagggatttgagaaagaatgtgtagaaagtgttgtga 2311854  T
Q  482 aag-tgatgtgtaccttgagggtgaagcaagttcacccttat 522  Q
    ||| |||    |||||||||||||||||||  ||||||||||    
T  2311853 aaggtgaatcataccttgagggtgaagcaatgtcacccttat 2311812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 414 - 531
Target Start/End: Complemental strand, 17143837 - 17143718
Alignment:
Q  414 aggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaag 511  Q
    ||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||| ||  |||||||||| |||||||    ||||||| ||||||| |||     
T  17143837 aggcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgggggtgaaacaac 17143738  T
Q  512 ttcacccttatataggcgtg 531  Q
     ||||||||||||| |||||    
T  17143737 atcacccttatataagcgtg 17143718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 510
Target Start/End: Complemental strand, 17485744 - 17485614
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtata-agaagtgttgt 479  Q
    ||||| |||| ||||||||||||||||||||  ||||| |||| || ||| |||| |||||||||||||||||||||| |||||| || |||| ||||||    
T  17485744 tgagtcttcgcggtggaacgaaaggtgtctgtgggcacattagcaccccaacgctcaagtcagtaatggaattgagaaggagtgtgtagagaa-tgttgt 17485646  T
Q  480 g-aaagtgatgtgtaccttgagggtgaagcaa 510  Q
    | ||| |||   ||||||||||||||||||||    
T  17485645 gtaaaatgaatagtaccttgagggtgaagcaa 17485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 529
Target Start/End: Complemental strand, 20118989 - 20118948
Alignment:
Q  488 tgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20118989 tgtgtaccttgagggtgaagcaagttcacccttatataggcg 20118948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 480 - 529
Target Start/End: Complemental strand, 20122799 - 20122750
Alignment:
Q  480 gaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  20122799 gaaagtgttgtgtaccttgagggtgaagaaagttcacccttatataggcg 20122750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 527
Target Start/End: Complemental strand, 21342396 - 21342260
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaact-ccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    ||||| ||||||||| | |||||||||||||  | | | ||||| ||||||||||||||| ||| ||||||||||||  |||||||||| |||||||       
T  21342396 ggtgggacgaaaggtatatgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaagtgaatc 21342297  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     ||| |||||||||||| ||| | |||||||||||||    
T  21342296 atacattgagggtgaagtaaggttacccttatatagg 21342260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 490 - 528
Target Start/End: Original strand, 12108500 - 12108538
Alignment:
Q  490 tgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12108500 tgtaccttgagggtgaagcaagttcacccttatataggc 12108538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 17396796 - 17396840
Alignment:
Q  482 aagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 526  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  17396796 aagtgttgtgtaccttgagggtgaagcatgttcacccttatatag 17396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 534
Target Start/End: Original strand, 20622491 - 20622533
Alignment:
Q  492 taccttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  20622491 taccttgagggtgaagcaagttcacccttatatatgcatgtgt 20622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 523
Target Start/End: Complemental strand, 28715551 - 28715465
Alignment:
Q  438 agtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttata 523  Q
    |||||||||||||| ||||||||||||| ||  |||||||||| |||||||    ||||||||||||||| |||  |||||||||||    
T  28715551 agtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcacccttata 28715465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 457
Target Start/End: Original strand, 21649384 - 21649460
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgaga 457  Q
    ||||| |||| |||||||||||||||| ||||| ||||||||| || || ||| | ||||||||||||||| |||||    
T  21649384 tgagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatggaactgaga 21649460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 455
Target Start/End: Complemental strand, 8123015 - 8122960
Alignment:
Q  401 gaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattga 455  Q
    ||||||||| |||||||||||||| ||||| ||||| |||||||||||| ||||||    
T  8123015 gaaaggtgtatgcaggcacgttagcactccaacgctcaagtcagtaatgaaattga 8122960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 492
Target Start/End: Complemental strand, 9781567 - 9781514
Alignment:
Q  440 tcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgt 492  Q
    ||||||||| || ||| ||||||||| |||||||||||||| ||||||||||||    
T  9781567 tcagtaatgtaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtgt 9781514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 12252015 - 12252071
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgt 492  Q
    |||||||||| | || ||||||||||||| |||||| ||||||| ||||||||||||    
T  12252015 aagtcagtaacgaaaatgagaaagagtgtgtaagaattgttgtgaaaagtgatgtgt 12252071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 316 - 534
Target Start/End: Complemental strand, 15742339 - 15742119
Alignment:
Q  316 ggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcag 415  Q
    |||||||| ||||  |||| | ||||| |||||||||||||||||||| ||  | |||||| ||  ||||| ||||||||||| ||||||||| |||| |    
T  15742339 ggttgagtggcaacggcggtatagaatgctccggtgtgacggtaacggtttctgacacggcgacgatgagtcttcgtggtggagcgaaaggtgcctgctg 15742240  T
Q  416 gcacgttagaactc-cacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagtt 513  Q
    ||||||||| ||||  ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||  |||||||| ||    
T  15742239 gcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagactgaagcaaatt 15742140  T
Q  514 cacccttatataggcgtgtgt 534  Q
    |||||||||||||||| ||||    
T  15742139 cacccttatataggcgcgtgt 15742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 388 - 528
Target Start/End: Complemental strand, 15514675 - 15514533
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagt 485  Q
    |||| ||||||||||| |||| ||| ||||||||||| |||||| |||| ||||||||||||||| ||| ||||||||| |||||||||||||| |||||    
T  15514675 ttcgcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaaagt 15514576  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15514575 gatgtgtaccttgagggtgaagcaagttcacccttatataggc 15514533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 14602120 - 14601981
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    ||||||||| |||||||||||||||||| | |||| |||| |||||||||||| || ||| | ||||||| ||||||||||||||||| ||| |||||||    
T  14602120 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtac 14602021  T
Q  495 cttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  14602020 cttgagggtgaagcaagttcatccttatatagccgtgtgt 14601981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 5518524 - 5518665
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgt 492  Q
    ||||||||||||||  ||||| |||||||| ||| || |||| ||||||||||| ||| ||||| ||| ||| |||||||||||||| ||||||||| ||    
T  5518524 tggaacgaaaggtgagtgcagacacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgt 5518623  T
Q  493 accttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  5518624 accttgagggtgaagcaagttcacccttatataggcgcgtgt 5518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 529
Target Start/End: Complemental strand, 16012664 - 16012443
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| ||||  | |||||||||| | | ||||||| |||||||||||  |||||| ||| | |  || |||  || || ||||| |||    
T  16012664 gtgagaacggttgagtggcaacggtggcagagaatgcactggtgtgatggtaacggcttcgggcacgacaaga-tccgtcttcacggagggacgaatggt 16012566  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga-aagtgatgtgtaccttgagggtga 505  Q
      ||||||||||||||  ||||| ||||| ||||||||||||||| ||||| ||||||| |||||||  |||||| ||||||| |||| ||||||| |||    
T  16012565 acctgcaggcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtgtgtaagaagcattgtgagaagtgatatgtatcttgagg-tga 16012467  T
Q  506 agcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||    
T  16012466 agcaagttcacccttatataggcg 16012443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 12683767 - 12683905
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||| |||| ||||||| || ||||||||||||| ||  |||||||||| |||||||       
T  12683767 ggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatc 12683866  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     |||||| |||||||||||||||||||||||| ||||||    
T  12683867 ataccttaagggtgaagcaagttcacccttatctaggcg 12683905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 394 - 527
Target Start/End: Complemental strand, 1638425 - 1638291
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    |||||||||||||||| ||||| ||| |||| ||||| ||| | ||||||||||||||| ||||| |||  || |||||||||||  |||| ||| ||||    
T  1638425 gtggaacgaaaggtgtttgcag-cactttagcactccgacgatcaagtcagtaatggaactgagagagaaagtctaagaagtgttaagaaaagtgttgtg 1638327  T
Q  492 taccttgagggtgaagcaagttcacccttatatagg 527  Q
    ||||||||||||||||||||||||||||||||||||    
T  1638326 taccttgagggtgaagcaagttcacccttatatagg 1638291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 529
Target Start/End: Original strand, 47253249 - 47253397
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg- 480  Q
    |||| |||| ||||| || |||||||  |||||||| ||||| |||||| |||| ||||||||||||||| ||||||||||||| ||| ||||||||||     
T  47253249 gagtcttcggggtgggacaaaaggtgcttgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtga 47253348  T
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||    ||||||||||||||||| |  |||||||||||||||||    
T  47253349 aaagtgaatcataccttgagggtgaagctaagtcacccttatataggcg 47253397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 382 - 531
Target Start/End: Original strand, 19643673 - 19643824
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||||| ||||||| |||||| | ||||| ||||||  | ||| ||||| ||||||||||||||| ||||||||||||| ||  |||| |||||    
T  19643673 tgagtcttcgtgatggaacggaaggtgcccgcaggtacgttaccaatccgacgcttaagtcagtaatggaactgagaaagagtgtgtagaaagtcttgtg 19643772  T
Q  481 aaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||| ||||    ||||||||||||||| ||||||||||||||||||||||||    
T  19643773 aaaagtgaatcataccttgagggtgaaacaagttcacccttatataggcgtg 19643824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 395 - 526
Target Start/End: Complemental strand, 13896586 - 13896453
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgt 492  Q
    ||||||||| |||| ||||| ||||||||  |||| | ||||  || |||||| |||| ||| | ||| |||||||||||||||||| ||||||||||||    
T  13896586 tggaacgaagggtgcctgcaagcacgttatcactcaaacgctctagccagtaagggaactgaaagagattgtataagaagtgttgtggaaagtgatgtgt 13896487  T
Q  493 accttgagggtgaagcaagttcacccttatatag 526  Q
    ||||||||||| ||| ||||||||||||||||||    
T  13896486 accttgagggtaaagaaagttcacccttatatag 13896453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 17110680 - 17110817
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||||||| ||| ||||| ||||||||| ||||| ||| | ||||||||||||||||||||| | |  || | |||||||||| | |||||  |||    
T  17110680 ggtggaacgaaatgtgcctgcaagcacgttagcactccgacgatcaagtcagtaatggaattgagaga-aaagtcttagaagtgttgcgaaaagtattgt 17110778  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||| ||||||||||||||||||||||||||| |||||||    
T  17110779 gtatcttgagggtgaagcaagttcacccttacataggcg 17110817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 29157084 - 29157222
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    ||||||||||||||||  ||||| |||||| | |||||| |||| |||| |||||||||| ||||||| ||||| ||  |||||||||| |||||||       
T  29157084 ggtggaacgaaaggtgcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtgaacc 29157183  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     |||||||| ||||||| |||||||||||||||||||||    
T  29157184 ataccttgatggtgaagtaagttcacccttatataggcg 29157222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 529
Target Start/End: Original strand, 25066171 - 25066264
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||| | ||| |||   | ||||| ||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  25066171 aagtcagtaatggaactaagagagaaaatctaagacgtgttgtgaaaagtgttgtgtaccttgaggttgaagcaagtttacccttatataggcg 25066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 527
Target Start/End: Original strand, 19563945 - 19564079
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    |||| |||||||||| ||||||||||||||| ||| | ||| | |||||||| ||| || ||||| | |  || | || || ||||||||| ||| ||||    
T  19563945 gtgggacgaaaggtgcctgcaggcacgttagcactgcgacgatcaagtcagttatgaaactgagataaaa-gtcttaggagggttgtgaaaagtgttgtg 19564043  T
Q  492 taccttgagggtgaagcaagttcacccttatatagg 527  Q
    |||||||||||||||||||||||||| |||||||||    
T  19564044 taccttgagggtgaagcaagttcaccgttatatagg 19564079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 529
Target Start/End: Original strand, 19809689 - 19809821
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtacct 496  Q
    |||||||||  |||||| || ||||| |||||| |||| |||||||||||| || | ||||||||||| ||  |||||||||| |||||||  | |||||    
T  19809689 acgaaaggttcctgcagacatgttagcactccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattatacct 19809788  T
Q  497 tgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||| | |  ||||||||| |||||||    
T  19809789 tgagggtgaaactaagtcacccttacataggcg 19809821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 13171065 - 13171135
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgta 466  Q
    ||||||||||||  |||||||||||||| ||||| || || ||||||||||||||| |||| |||||||||    
T  13171065 gaacgaaaggtgcttgcaggcacgttagcactccaactctcaagtcagtaatggaactgagcaagagtgta 13171135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 18463857 - 18463920
Alignment:
Q  467 taagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||| |||||||||||| ||| |||||| |||||||||||| ||| |||| |||||||||||||    
T  18463857 taaggagtgttgtgaaaagtgttgtgtatcttgagggtgaaacaatttcatccttatataggcg 18463920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 531
Target Start/End: Complemental strand, 50151812 - 50151773
Alignment:
Q  492 taccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  50151812 taccttgagggtgaagcaaagtcacccttatataggcgtg 50151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Original strand, 12415507 - 12415552
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 526  Q
    |||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  12415507 aaagtgttgtgtactttgagggtaaagtaagttcacccttatatag 12415552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 311 - 527
Target Start/End: Complemental strand, 19730781 - 19730564
Alignment:
Q  311 agaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtc 410  Q
    |||| |||||||| ||||  || ||||||||| |||||||||| |||||||| ||||||||||| |  |  ||||| ||||||||||||  |||| ||      
T  19730781 agaaaggttgagtggcaacggctgcagagaatgctccggtgtggcggtaacgactttcggcacgacggcgttgagtcttcgtggtggaagtaaag-tgca 19730683  T
Q  411 tgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagc 508  Q
    |||||||| ||||| |||||| |||| |||||| |||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  19730682 tgcaggcatgttagcactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgtcgtgtaaagtgatgtgtaccttgagggtgaagc 19730583  T
Q  509 aagttcacccttatatagg 527  Q
    |||||||||||||||||||    
T  19730582 aagttcacccttatatagg 19730564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 527
Target Start/End: Original strand, 9403076 - 9403290
Alignment:
Q  310 gagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgt 409  Q
    ||||| |||||||| ||||  |||| |  |||| |||||||||||||||||||||||  | || |||| |  |||||  ||||||||||| |||| |       
T  9403076 gagaatggttgagtagcaacggcggtaaggaatgctccggtgtgacggtaacggcttctgacatggcagcgatgagtcatcgtggtggaatgaaacg--- 9403172  T
Q  410 ctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaag 507  Q
      ||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  9403173 --gcaggcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaag 9403270  T
Q  508 caagttcacccttatatagg 527  Q
    ||||||||||||||||||||    
T  9403271 caagttcacccttatatagg 9403290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 336 - 529
Target Start/End: Complemental strand, 12449749 - 12449554
Alignment:
Q  336 agagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgc 434  Q
    ||||||| ||| |||||||| |||||| |||||||||| ||     ||||| |||||||||| |||||||||||||| ||||||||||| ||||  ||||    
T  12449749 agagaatgctctggtgtgacagtaacgactttcggcaccgcggtgatgagtcttcgtggtgggacgaaaggtgtctgtaggcacgttagcactctgacgc 12449650  T
Q  435 taaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    | ||||||||||||||  ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  12449649 tcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaatcaagtttacccttatataggcg 12449554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 316 - 529
Target Start/End: Complemental strand, 31295721 - 31295506
Alignment:
Q  316 ggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcag 415  Q
    |||||||  ||||| | |||||||||| ||| |||||||| ||||  |||| |||  |||| ||   |||| |||| ||||||||||||| || ||||||    
T  31295721 ggttgaggggcaatggtggcagagaatgctcgggtgtgacagtaatagcttccggtgcggcgacgacgagtcttcgaggtggaacgaaagttgcctgcag 31295622  T
Q  416 gcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagtt 513  Q
    ||| ||||| ||| | ||||| |||||||||||| || ||||||||||||| || |||||||||||||| ||||| ||||||| ||||||||||||||||    
T  31295621 gcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtgatatgtacctcgagggtgaagcaagtt 31295522  T
Q  514 cacccttatataggcg 529  Q
    |||||||| |||||||    
T  31295521 cacccttacataggcg 31295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 534
Target Start/End: Complemental strand, 27861068 - 27860914
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||  |||||||||| ||||||||||||||||| ||||| |||| | | || ||||||||||||||| ||| | |||| || ||||||||||||||    
T  27861068 tgagtttctgtggtggaacaaaaggtgtctgcaggcatgttagtactctaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtg 27860969  T
Q  481 aaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||| ||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  27860968 aaaagtgatgtgtactttgagggtgaagcaagttcacccttttataggcgcgtgt 27860914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 529
Target Start/End: Original strand, 34064181 - 34064315
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    ||||||||||||| |||||||||||||  |||   ||| | |||||||||||| || | ||||||||||| ||||||||||||||||| |||||||||||    
T  34064181 gaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtac 34064280  T
Q  495 cttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||||||||||||||||||||||||||||    
T  34064281 cttgagggtgaagcaagttcacccttatataggcg 34064315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 442 - 529
Target Start/End: Complemental strand, 19277135 - 19277047
Alignment:
Q  442 agtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19277135 agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 19277047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 393 - 528
Target Start/End: Original strand, 34187281 - 34187413
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    ||||||||||||||||||||||| |||||||| || ||| | || ||||||||||||||| ||||||||||||| ||| |||||| ||||||||||  ||    
T  34187281 ggtggaacgaaaggtgtctgcagacacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtgaaagtgaattg 34187380  T
Q  492 taccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||||||||||    ||||||||||||||||    
T  34187381 taccttgagggtgaagc----tcacccttatataggc 34187413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 526
Target Start/End: Complemental strand, 22497418 - 22497272
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| | ||||||||||||||  ||||| |||||||| ||||| ||||| |||||||||||||||  || | |||| |||||| ||||||||||    
T  22497418 tgagtcttcgcgatggaacgaaaggtgcttgcagacacgttagcactccgacgctcaagtcagtaatggaacagaaagagagagtataaaaagtgttgtg 22497319  T
Q  481 aaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatatag 526  Q
    ||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  22497318 aaaagtgttgtgtaccttgagggtgaagcaagttcacccatatatag 22497272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 394 - 529
Target Start/End: Complemental strand, 12424422 - 12424285
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    ||||||||||||||| ||||||||||||||| ||| | ||  | ||||||||||||||| ||||| |||  || ||| ||||||||||||| ||| ||||    
T  12424422 gtggaacgaaaggtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgttgtgaaaagtgttgtg 12424323  T
Q  492 taccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||| |||||||||||||||||||||||||||||||    
T  12424322 taccttaagggtgaagcaagttcacccttatataggcg 12424285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 394 - 528
Target Start/End: Original strand, 16343562 - 16343698
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtg 491  Q
    ||||| |||| |||| ||||||||||||||| |||||| | || ||||||||||||||| ||||| |||  || |||||||||||||| |||||||||||    
T  16343562 gtggagcgaagggtgcctgcaggcacgttagcactccaacactcaagtcagtaatggaactgagagagaaagtgtaagaagtgttgtggaaagtgatgtg 16343661  T
Q  492 taccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||| ||||  ||||||||||||||| |||||||||||    
T  16343662 tactttgaatgtgaagcaagttcacacttatataggc 16343698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 528
Target Start/End: Original strand, 20148299 - 20148434
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||| |||  ||||| |||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||  |||||||||||| ||||       
T  20148299 ggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgtagaa--agtgttgtgaaaagtgaatc 20148396  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggc 528  Q
     |||||||| ||||||||||| ||||||||||||||||    
T  20148397 ataccttgatggtgaagcaaggtcacccttatataggc 20148434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 528
Target Start/End: Complemental strand, 22184529 - 22184394
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||| |||  ||||| |||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||  |||||||||||| ||||       
T  22184529 ggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgtagaa--agtgttgtgaaaagtgaatc 22184432  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggc 528  Q
     |||||||| ||||||||||| ||||||||||||||||    
T  22184431 ataccttgatggtgaagcaaggtcacccttatataggc 22184394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 526
Target Start/End: Complemental strand, 12488116 - 12487970
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| ||||| |||||||||| ||||  |||| ||||||||| |||| | |||| |||||| |||| ||| | | | ||||||| |||| |||||||||    
T  12488116 tgagtcttcgttgtggaacgaagggtgcatgcatgcacgttagcactctaacgctgaagtcaataatagaactaaaatagagtgtgtaagtagtgttgtg 12488017  T
Q  481 aaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatatag 526  Q
    ||| ||||||||||| ||||||||||  |||||||||||||||||||    
T  12488016 aaaagtgatgtgtacattgagggtgatacaagttcacccttatatag 12487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 23768176 - 23768307
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtg 491  Q
    |||||||||| ||||| | ||||||  |||| ||||||  ||| ||||||||||| ||| ||| | | ||||| |||||||||||||| |||||||||||    
T  23768176 gtggaacgaagggtgtttacaggcatattagcactccaatgctcaagtcagtaattgaactgaaagatagtgtgtaagaagtgttgtggaaagtgatgtg 23768275  T
Q  492 taccttgagggtgaagcaagttcacccttata 523  Q
    |||||  ||||| |||||||||||||||||||    
T  23768276 tacctcaagggtaaagcaagttcacccttata 23768307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 19305446 - 19305584
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||||  ||  ||||||||||| |||  | |||| ||||||||||||||| |||| |||||||| ||  ||||||||||||| ||||       
T  19305446 ggtggaacgaaaggttcctagaggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaatc 19305545  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     |||||||||||||||||||| ||||||||| |||||||    
T  19305546 ataccttgagggtgaagcaaggtcacccttaaataggcg 19305584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 19331799 - 19331701
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||| |||| ||||||||||||||||  |||||| ||||||| ||||| ||||| ||||||||||||||| | |||||||| |||||  ||||||||||    
T  19331799 gagtcttcgcggtggaacgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagagagtatagaaagtgttgtg 19331701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 527
Target Start/End: Complemental strand, 14184574 - 14184529
Alignment:
Q  482 aagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  14184574 aagtgttgtgtaccttgagggtgaagcaagttcacccttatatagg 14184529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 529
Target Start/End: Original strand, 16130995 - 16131088
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||| ||| |||||||||| |  ||||||||||||| ||||    ||||||||||||||| |||||| |||||||||||||||    
T  16130995 aagtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcataccttgagggtgaaacaagtttacccttatataggcg 16131088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 529
Target Start/End: Original strand, 22572028 - 22572164
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtg 491  Q
    ||||||| ||||||| ||||||||||||||| |||   ||||| | ||||||||||||||||| ||||||||| ||  | |||||||| |||||||        
T  22572028 gtggaacaaaaggtggctgcaggcacgttagcactatgacgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgtaaagtgaatca 22572126  T
Q  492 taccttgagggtgaagcaagttcacccttatataggcg 529  Q
    || ||||||||||||||||||||||| |||||| ||||    
T  22572127 tatcttgagggtgaagcaagttcacctttatattggcg 22572164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 528
Target Start/End: Complemental strand, 9277409 - 9277273
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    |||||||||||||||  |||||| |||||||| |||  | |||| ||||||||| ||||| ||||||||||| | ||| |||||| | ||||||||        
T  9277409 ggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtggagaaagtgaatca 9277310  T
Q  492 taccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||||||| |  ||||||||||| ||||    
T  9277309 taccttgagggtgaagctaactcacccttatacaggc 9277273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 481 - 529
Target Start/End: Complemental strand, 13823397 - 13823349
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13823397 aaagtgttgtgtaccttgagggtgaagcaagttcacctttatataggcg 13823349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 18147288 - 18147424
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||| ||||||||||| ||| ||| ||||||  |||||| |||| |||||| ||||||||  |||||||||||| ||  |||||||||| |||||||       
T  18147288 ggtgaaacgaaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgactc 18147387  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||| ||||||||||||  |||||||||||||||    
T  18147388 atacctttagggtgaagcaatgtcacccttatatagg 18147424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 9292128 - 9291991
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactc-cacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    |||||||||||||||| ||||| ||||||||| || |  ||||| ||||||||| ||||| ||||||| ||| | ||| |||||| |  |||||||        
T  9292128 ggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactgagaaatagtatgtaaaaagtgtgggaaaagtgaatca 9292029  T
Q  492 taccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||| |  ||||| |||||||||||    
T  9292028 taccttgagggtgaagctaactcacctttatataggcg 9291991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 14921331 - 14921230
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| |||||||||  ||| |||||| |||  || ||||||||| ||||||| ||| ||||| | | ||||||||||||||||||| ||||||||||||    
T  14921331 acgctcaagtcagtatgggacttgagagagaaagtgtaagaagtgatgtgaaaagtgttgtgtccttggagggtgaagcaagttcacacttatataggcg 14921232  T
Q  530 tg 531  Q
    ||    
T  14921231 tg 14921230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 529
Target Start/End: Original strand, 18566685 - 18566777
Alignment:
Q  438 agtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||||||| ||||||||| ||| ||  ||| ||||| ||| |||| || |||||||||||||| |||||||||||  ||||||||||    
T  18566685 agtcagtaatggaactgagaaagattgtgtagaaagcgttgtaaaaagtgaagtctaccttgagggtgaggcaagttcacctctatataggcg 18566777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 529
Target Start/End: Original strand, 18994051 - 18994099
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  18994051 aaagtgttgtgtaccctgaggttgaagcaagttcacccttatataggcg 18994099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 25008498 - 25008415
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgt 476  Q
    |||| ||||||||||  ||  |||||||||  |||||| |||| ||||||||||||||||||||||||||||| ||| ||||||    
T  25008498 gtgggacgaaaggtgcatgtcggcacgttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtgt 25008415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 529
Target Start/End: Complemental strand, 689958 - 689829
Alignment:
Q  401 gaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttg 498  Q
    ||||||||| |||||| || |||| ||| ||  ||| ||||||||||||||| |||||||| |||| ||  |||||||||| |||||||   ||||||||    
T  689958 gaaaggtgtttgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatcgtaccttg 689859  T
Q  499 agggtgaagcaagttcacccttatataggcg 529  Q
    ||| || | |||| |||||||||||||||||    
T  689858 aggctg-atcaaggtcacccttatataggcg 689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 33596843 - 33596981
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    |||||||||||||||  |||||||||| |||  |||| | |||| || ||||||||| || | ||||| ||||| ||  ||||||||||||| ||   |     
T  33596843 ggtggaacgaaaggtacctgcaggcacattaacactctaacgctcaactcagtaatgaaactaagaaaaagtgtgtagaaagtgttgtgaaaatggaatc 33596942  T
Q  492 -taccttgagggtgaagcaagttcacccttatataggcg 529  Q
     |||||||||| |||||||||||||| ||||||||||||    
T  33596943 ataccttgaggatgaagcaagttcactcttatataggcg 33596981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 462
Target Start/End: Original strand, 30680963 - 30681044
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagag 462  Q
    ||||| |||| ||||| ||||||||||||||||  |||||||| ||||| ||||| |||||||||||| || ||| ||||||    
T  30680963 tgagtcttcgcggtgggacgaaaggtgtctgcaatcacgttagcactccaacgctcaagtcagtaatgaaactgataaagag 30681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 31423986 - 31423906
Alignment:
Q  344 ctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttag 424  Q
    |||||||||||| ||||||| || ||| ||||||||  ||| | ||||||||||||||||||||   ||||| ||||||||    
T  31423986 ctccggtgtgacagtaacggtttccggtacggcaacgttgaatcttcgtggtggaacgaaaggtccttgcagacacgttag 31423906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 535
Target Start/End: Complemental strand, 3404926 - 3404827
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgtgtg 535  Q
    ||||||||||||||| ||||||||||||| ||  |||||||||| ||| |||    ||||||||||||||||  |  | ||||||||||||||| |||||    
T  3404926 aagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcataccttgagggtgaagttaaattacccttatataggcgcgtgtg 3404827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 17380124 - 17380219
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||||| ||| |||||||||||||  |  ||||||||||||| ||||    |||||| ||| ||| ||||| |||||||||||||||||||    
T  17380124 aagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtgaatcttaccttcaggttgacgcaaggtcacccttatataggcgtg 17380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 534
Target Start/End: Complemental strand, 31423842 - 31423803
Alignment:
Q  495 cttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  31423842 cttgagggtgaagcaagtgcacccttatataggcgcgtgt 31423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 483
Target Start/End: Original strand, 14080464 - 14080556
Alignment:
Q  391 gtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    ||||||| |||||||||| || ||||||| |||| ||||  ||||| |||| ||||||| || ||||||||||||| ||  |||||||||||||    
T  14080464 gtggtgggacgaaaggtgcctacaggcacattagcactctgacgctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaa 14080556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 27772573 - 27772537
Alignment:
Q  492 taccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  27772573 taccttgaaggtgaagcaaggtcacccttatataggc 27772537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 307 - 528
Target Start/End: Complemental strand, 14255225 - 14255014
Alignment:
Q  307 agtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaagg 406  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||||||||||||| ||||| |||| ||||  |  ||||| |||||||||||||||| ||    
T  14255225 agtgagaacggttgagtagcaacggcggcagagaatgctccggtgtgacggtaatggcttccggcgcggcggcgatgagtcttcgtggtggaacgaaggg 14255126  T
Q  407 tgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtgtaccttgagggtga 505  Q
    || ||||| ||||| ||| ||||| ||||| |||||| ||||| || ||||||||||||| ||||||||||           ||||||||||||||||||    
T  14255125 tgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaagtgt-----------tgtgtaccttgagggtga 14255037  T
Q  506 agcaagttcacccttatataggc 528  Q
    | |||||||||||||||||||||    
T  14255036 aacaagttcacccttatataggc 14255014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 4601681 - 4601462
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| ||||  | |||||| ||| ||| |||||||||||||  | || ||||| |||  |  | ||| |||| |||||||||||||||    
T  4601681 gtgagaacggttgagtagcaacggtggcagaaaatgctctggtgtgacggtaattgtttccggcatggcggcgataagtcttcgcggtggaacgaaaggt 4601582  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagt-gatgtgtaccttgagggtga 505  Q
    | ||||||||||||||| ||||| ||||| |||||||||||| || ||||||| | ||| ||| ||||| ||||||| | ||||||| ||||||||||||    
T  4601581 gactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaataatgtgtaataagtgctgtgaaatttgatgtgtcccttgagggtga 4601482  T
Q  506 agcaagttcacccttatata 525  Q
    ||||||||||||||||||||    
T  4601481 agcaagttcacccttatata 4601462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 529
Target Start/End: Complemental strand, 23728925 - 23728791
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    ||||||||||||  |||||||||||||| | |   ||||| |||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  23728925 gaacgaaaggtggatgcaggcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtac 23728826  T
Q  495 cttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||||| ||||||||||||||||||||||    
T  23728825 cttgagggtgaaacaagttcacccttatataggcg 23728791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 393 - 532
Target Start/End: Original strand, 25408078 - 25408219
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    ||||||| |||||||| |||||| |||||||| ||||||  ||| |||||||||||| || ||| | ||||||| ||||||||||||||||| |||||||    
T  25408078 ggtggaatgaaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgatgt 25408177  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcgtgt 532  Q
    || |||||||||||||||||||||||||||  ||||||||||    
T  25408178 gtcccttgagggtgaagcaagttcaccctttcataggcgtgt 25408219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 26977722 - 26977860
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||  |||||||||||| ||  |||| ||||| ||| |||       
T  26977722 ggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattgtgaaaaatgaatc 26977821  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
     ||||||||||||||||||| || |||||||||||||||    
T  26977822 ataccttgagggtgaagcaatttgacccttatataggcg 26977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 12177368 - 12177504
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||||||||||| || || ||||||||| ||||| || || ||||||||||||||| ||||||||||||| ||  |||||||||| |||||||  |    
T  12177368 ggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatt 12177467  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     ||||||||||  |||||||||||| |||||||||||    
T  12177468 ataccttgaggaggaagcaagttcaaccttatatagg 12177504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 527
Target Start/End: Complemental strand, 21098954 - 21098819
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||||| |||||||||| |||| ||||| ||| | ||||||||||||||| ||| | | |  |||| | ||||||| ||||| ||| |||    
T  21098954 ggtggaacgaaaggtggctgcaggcacattagcactccgacgatcaagtcagtaatggaactgatagaaaa-gtattataagtgttatgaaaagtgttgt 21098856  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
    |||||||||||||||||||||||||||||||||||||    
T  21098855 gtaccttgagggtgaagcaagttcacccttatatagg 21098819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 534
Target Start/End: Complemental strand, 16299767 - 16299547
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||| ||||||| |||| ||||| ||||||| ||||||||| || |||||| ||| ||  |||||  |  ||||| || | |||||||||||| ||    
T  16299767 gtgagaacagttgagtggcaacagcggtagagaatgctccggtgttaccgtaacgacttccgatacggcggcgatgagtctt-gcggtggaacgaaacgt 16299669  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtga 505  Q
    ||||||| |||| |||| ||||| ||| | |||| ||||||| || ||||||||||||  |||||||||||||| ||| ||||||||||        |||    
T  16299668 gtctgcatgcacattagcactccgacgttcaagtaagtaatgaaactgagaaagagtgcgtaagaagtgttgtgaaaaatgatgtgtac-------atga 16299576  T
Q  506 agcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||| |||||||    
T  16299575 agcaagttcacccttatatagacgtgtgt 16299547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 531
Target Start/End: Complemental strand, 21682698 - 21682559
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaa-agagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    ||||||||||||||| ||  ||| ||||| | |||||| |||| ||||||||||||||| | |||| ||||||| |||||| | |||||||| || ||||    
T  21682698 gtggaacgaaaggtgcctataggtacgtttgcactccaacgctcaagtcagtaatggaact-agaagagagtgtgtaagaaatattgtgaaaagtaatgt 21682600  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  21682599 gtaccttgagggtgacgcaaattcacccttatataggcgtg 21682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 382 - 532
Target Start/End: Original strand, 52565551 - 52565703
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactc-cacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||||||| |||||||||||||| |||||| |||||||| ||||  ||||| |||||||||| |||| ||| ||||||||   |  ||||||||||    
T  52565551 tgagttttcgtgatggaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttgtg 52565650  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgt 532  Q
     |||||||    || ||||||||||||||||||||| |||||||| |||||||    
T  52565651 aaaagtgaatcataacttgagggtgaagcaagttcatccttatattggcgtgt 52565703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 527
Target Start/End: Complemental strand, 1659898 - 1659762
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    ||||||||||||||||||| ||  |||||||  |||||| |||| |||||| |||||||  ||||||||| ||| ||||||||||||||||| ||||       
T  1659898 ggtggaacgaaaggtgtctacatacacgttatcactccaacgctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaagtgagaa 1659799  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     || |||| ||||| ||||||||||||||||||||||    
T  1659798 atatcttgtgggtggagcaagttcacccttatatagg 1659762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 529
Target Start/End: Original strand, 3590811 - 3590947
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgt 492  Q
    ||||||||||||||  ||||||||| |||| ||||| ||| | ||||||||||||||| ||||| | |  || | || || ||||||||| ||| |||||    
T  3590811 tggaacgaaaggtgcatgcaggcaccttagcactccgacgatcaagtcagtaatggaactgagagaaaa-gtcttaggagagttgtgaaaagtgttgtgt 3590909  T
Q  493 acctt-gagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  3590910 acctttgagggtgaagcaagttcacccttatataggcg 3590947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 528
Target Start/End: Original strand, 22414757 - 22414894
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||||| | ||||||||||||| ||||  ||||| |||||||||||| || ||| ||| ||||| ||  ||||||||||||| ||||       
T  22414757 ggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtgtagaaagtgttgtgaaaagtgaatc 22414856  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggc 528  Q
     || ||||||||||||||||||||| |||| |||||||    
T  22414857 atatcttgagggtgaagcaagttcatccttgtataggc 22414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 524
Target Start/End: Original strand, 18246125 - 18246257
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtg 491  Q
    |||||||||||||||||||| | ||||||||  |||||| |||| |||| |||| | ||||||||||||||||||||| ||||||    ||||||||       
T  18246125 ggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaagtgagtattagaattgagaaagagtgtataaaaagtgtgagaaaagtgattca 18246224  T
Q  492 taccttgagggtgaagcaagttcacccttatat 524  Q
    ||||||||||||||||  |  ||||||||||||    
T  18246225 taccttgagggtgaagataagtcacccttatat 18246257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 34273069 - 34273205
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    ||||| |||||||||  ||||| ||||||||| ||||||  ||| |||||||||| |||| ||||||||||||| ||  |||||||||| |||||||       
T  34273069 ggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactc 34273168  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||||||||||||||  || ||||||||||||    
T  34273169 ataccttgagggtgaagcaatgtcgcccttatatagg 34273205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 527
Target Start/End: Original strand, 16050365 - 16050512
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| ||||||  ||||||| |||||||||||||||| ||||| ||||| |||||| | |||||| ||||||||||||| ||  |||||| |||    
T  16050365 tgagtcttcgcggtggatagaaaggtatctgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtggtg 16050464  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||    |||||||||| ||||||||   ||||||||||||||    
T  16050465 aaaagtgaaccataccttgaggatgaagcaatgccacccttatatagg 16050512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 529
Target Start/End: Original strand, 48637612 - 48637659
Alignment:
Q  482 aagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  48637612 aagtgttgtgtaccttgagggtgaaacaagttcacccttatataggcg 48637659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 5671761 - 5671843
Alignment:
Q  402 aaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    |||||||| || ||||||||||| |||||| |||| |||| |||||||||| ||||||||||||| ||  |||||||||||||    
T  5671761 aaaggtgtttgtaggcacgttagcactccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaa 5671843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 33101608 - 33101525
Alignment:
Q  401 gaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    ||||||||  |||||||||||||| |||||| |||| ||||| ||||||||| ||||||| ||||| ||  |||||||||||||    
T  33101608 gaaaggtgcatgcaggcacgttagcactccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtgaaa 33101525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 16522759 - 16522829
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaac-tccacgctaaagtcagtaatggaattgagaaagagtg 464  Q
    |||||||||||||||||| ||||||||||| || || ||| | |||||| ||| |||||||||||||||||    
T  16522759 tggaacgaaaggtgtctgaaggcacgttagcacttcaacgttcaagtcaataaaggaattgagaaagagtg 16522829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Original strand, 48637537 - 48637621
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||||||| |||||||||||| || ||||  ||||| ||||||||||||||| ||| | ||||  | ||||||||||||||    
T  48637537 gaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatggaactgaaagagaggatgtaagaagtgttgtg 48637621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 535
Target Start/End: Original strand, 8018920 - 8019074
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaact-ccacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||||||||| ||||||||| ||| |||||||||||| ||| | ||||| |||||||||  |||| |||||  || |||  || ||||   |      
T  8018920 tgagtcttcgtggtgggacgaaaggtatctacaggcacgttagcactacgacgctcaagtcagtatgggaaatgagatggaatgtgcaaaaagtagggga 8019019  T
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgtgtg 535  Q
    |||||||    ||||||| ||||||||| |  |||||||||||||||||||||||    
T  8019020 aaagtgaatcataccttgggggtgaagctatgtcacccttatataggcgtgtgtg 8019074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 29217710 - 29217657
Alignment:
Q  309 tgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacg 362  Q
    ||||||| ||||| | ||||  |||||||||||| |||||||||||||||||||    
T  29217710 tgagaacagttgaatggcaacggcggcagagaatgctccggtgtgacggtaacg 29217657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 529
Target Start/End: Complemental strand, 15390779 - 15390556
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| ||||  | | |||||||| |||  |||||||||||||||||| |||||||||| |  ||||| |||| | ||||||||||| |    
T  15390779 gtgagaacggttgagtggcaacggtgccagagaatgctctagtgtgacggtaacggcttccggcacggcagcgatgagtcttcgcgatggaacgaaagct 15390680  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    | ||   |||||||||| |||   ||||| |||| ||| |||||| | | ||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15390679 gcctattggcacgttagcactttgacgctcaagtaagtgatggaactaataaacagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtga 15390580  T
Q  506 agcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||    
T  15390579 agcaagttcacccttatataggcg 15390556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 308 - 529
Target Start/End: Original strand, 15825052 - 15825274
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||| |||||||  |||  | ||||||||||  |||||||||||| ||| ||||  |||||||||   |  |||| || |||||||||||||| ||    
T  15825052 gtgagaacagttgagtgacaacggtggcagagaatgttccggtgtgacgataatggctaccggcacggcggtaa-gagtctttgtggtggaacgaaatgt 15825150  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    ||||||||||||||||| |||   ||||| ||||| ||||||||| ||||||||||||| ||  ||||||||||||| || |||||||||||||||||||    
T  15825151 gtctgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtcatgtgtaccttgagggtga 15825250  T
Q  506 agcaagttcacccttatataggcg 529  Q
    ||||||||||||||| ||||||||    
T  15825251 agcaagttcacccttgtataggcg 15825274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 529
Target Start/End: Original strand, 29710995 - 29711136
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gt 485  Q
    |||| |||||||| |||||||| |||| ||||||||| |||||| |||| |||||| |||||||||||| | ||||||||   |||||||||||||| ||    
T  29710995 ttcgcggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcactaatggaattgaaagagagtgtac--gaagtgttgtgaaaagt 29711092  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29711093 gatgtgtaccttgagggtgaagcaagttcacccttatataggcg 29711136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 529
Target Start/End: Original strand, 18135799 - 18135991
Alignment:
Q  339 gaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaa 437  Q
    |||||||||||||||| ||||||  |||||||  ||||  |  ||||| |||  ||||| | |||||||| ||| ||||||||||| ||||  ||||| |    
T  18135799 gaattctccggtgtgatggtaaccactttcggtgcggcggcgttgagtcttcacggtgggatgaaaggtgcctgtaggcacgttagtactctgacgctca 18135898  T
Q  438 agtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| ||| ||||||| ||||| || |||||||||||||||||||||||||||||    
T  18135899 agttagtaatggaactgagaaagagtgtgtaagaagtgttgtcaaaagtgatgtatacctagaaggtgaagcaagttcacccttatataggcg 18135991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 344 - 528
Target Start/End: Complemental strand, 19050593 - 19050407
Alignment:
Q  344 ctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtca 442  Q
    |||||||||||| |||||   ||||| |||| || |  ||||| |||| ||||||||||||||| | ||||| | |||||| ||||  ||||| ||||||    
T  19050593 ctccggtgtgacagtaacaattttcgacacgacagcgatgagtgttcgcggtggaacgaaaggtatttgcagacccgttagcactctgacgctcaagtca 19050494  T
Q  443 gtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||| ||| | |||||||| || ||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  19050493 gtaatagaactaagaaagagagtgtaagaagtgttgtgaaaagtgatgtgtaccctgagagtgaagtaagttcacccttatataggc 19050407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 344 - 529
Target Start/End: Original strand, 3586296 - 3586483
Alignment:
Q  344 ctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtca 442  Q
    ||||||||||||||| | || || ||| ||||| ||  ||||| || | ||||||| ||||||||  ||| |||||||||| ||||| ||||| ||||||    
T  3586296 ctccggtgtgacggtgaaggtttccggtacggcgacgttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtca 3586395  T
Q  443 gtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||| ||||||| ||||  ||  ||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||    
T  3586396 gtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcg 3586483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 24157413 - 24157272
Alignment:
Q  395 tggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgt 492  Q
    |||||||||||||| || || ||||||||| ||||  ||||| ||||||||||||||| ||||| | |  || ||||||||||||||||| ||  |||||    
T  24157413 tggaacgaaaggtgcctacatgcacgttagcactctgacgctcaagtcagtaatggaactgagagataaagtctaagaagtgttgtgaaaagtattgtgt 24157314  T
Q  493 accttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  24157313 accttgagggtgaagcaagttcacccttatataagcgcgtgt 24157272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 534
Target Start/End: Complemental strand, 10923359 - 10923131
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    ||||||| |||||||| ||||  |||||||||||| ||| ||||||||||||| ||  | ||| ||||      | ||| |||| |||||||||||||||    
T  10923359 gtgagaatggttgagtggcaactgcggcagagaatgctctggtgtgacggtaatggtctccggaacggtggtgattagtcttcgcggtggaacgaaaggt 10923260  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    || || ||||||||||  ||||| || || |||||||| |||||| | | ||||||||| ||  ||||| ||||||| |||| |||| ||||||||||||    
T  10923259 gtatgtaggcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaagtgtgccttgagggtga 10923160  T
Q  506 agcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||  |||||||    
T  10923159 agcaagttcacccttatatacacgtgtgt 10923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 29137798 - 29137971
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    ||||| |||||||||| ||||  ||| ||||||||  |  ||||||| ||||||||||| ||||||||| ||  |||||  ||| ||||||||||||| |    
T  29137798 gtgagtacggttgagtagcaacggcgacagagaatgttttggtgtgatggtaacggcttccggcacggcgacgatgagtcatcgaggtggaacgaaagat 29137897  T
Q  408 gtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||||||| ||||||| || || ||||| |||||| ||||| || ||||||||||||| |||||| |||||||    
T  29137898 gtctgcaggtacgttagcacaccgacgctcaagtcattaatgcaactgagaaagagtgtgtaagaaatgttgtg 29137971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 12168954 - 12169093
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgc-taaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatg 489  Q
    ||||||||||||||||||||||||||| |||  ||||| |||| | ||||||||||||||| | ||||||||||| ||  |||||||||| |||||||      
T  12168954 ggtggaacgaaaggtgtctgcaggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaat 12169053  T
Q  490 tgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    | |||||||||||||||||||   |||||||| |||||||    
T  12169054 tataccttgagggtgaagcaatgccacccttaaataggcg 12169093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 529
Target Start/End: Complemental strand, 19919180 - 19919037
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactc-cacgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagt 485  Q
    ||||||||||||||||||||| ||||||| || |||||||||  |||| ||||||| |||||||| ||||||||||| | ||  |||||||||| |||||    
T  19919180 ttcgtggtggaacgaaaggtgcctgcaggaacattagaactctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagt 19919081  T
Q  486 gatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||    |||||||||| ||||||||  |||| ||||||||||||    
T  19919080 gaatcataccttgaggatgaagcaatatcactcttatataggcg 19919037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 531
Target Start/End: Original strand, 36267481 - 36267620
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    |||||| |||||||| ||||| ||| ||||  |||||| |||| |||||||||||| || ||||||||||||| ||  ||| ||||||||| ||||        
T  36267481 gtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtgaaaagtgaatca 36267580  T
Q  492 taccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  36267581 taccttgagggtgaagcaagttcacccttatatagacgtg 36267620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 24499777 - 24499911
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtacct 496  Q
    |||||||||| ||  ||| ||||||| |||||| |||| ||||||||||||||| ||||||||||||| ||  || |||||||||| ||||    |||||    
T  24499777 acgaaaggtgcctctaggaacgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcatacct 24499876  T
Q  497 tgagggtgaagcaagttcacccttatataggcgtg 531  Q
    | ||||||||||||||||||||||||| |||||||    
T  24499877 taagggtgaagcaagttcacccttataaaggcgtg 24499911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 45714966 - 45715068
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| ||| |||||||||||||||||  |||||||||||||| ||||| ||||| |||||||||||| || ||||||||||||| ||| |||||| |||    
T  45714966 tgagtcttcctggtggaacgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtggtg 45715065  T
Q  481 aaa 483  Q
    |||    
T  45715066 aaa 45715068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 20120329 - 20120465
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga-aagtgatgt 490  Q
    |||||||||||||||||||||||||||||||| ||||| || || |||||||||||| || ||||||||||||| |   ||||| ||||| ||||||       
T  20120329 ggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaatc 20120428  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||||||| || ||||| || |||||||||||    
T  20120429 ataccttgagggtaaaacaagtccatccttatatagg 20120465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 527
Target Start/End: Complemental strand, 45258272 - 45258125
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    ||||| |||| ||||||||||||| |||||||||||||||||  ||||| | ||| |||| ||||||| || | ||||||| ||| |   ||||||||||    
T  45258272 tgagtcttcgcggtggaacgaaagatgtctgcaggcacgttaacactccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgttgtg 45258173  T
Q  481 -aaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||    |||||||||||||||||||  |||||||||||||||    
T  45258172 aaaagtgaatcataccttgagggtgaagcaaagtcacccttatatagg 45258125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 526
Target Start/End: Original strand, 18772239 - 18772365
Alignment:
Q  398 aacgaaaggtgtctgcaggcacgttagaactcc-acgct-aaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    |||||||||||| |||||||||||||| ||||  | ||| ||||| |||||||||| |    |||||||| ||  ||||||||||||| |||| ||| ||    
T  18772239 aacgaaaggtgtttgcaggcacgttagcactctgatgctcaaagt-agtaatggaact----aagagtgtgtagaaagtgttgtgaaaagtgacgtgcac 18772333  T
Q  495 cttgagggtgaagcaagttcacccttatatag 526  Q
    ||||||||||||||||||||||||||||||||    
T  18772334 cttgagggtgaagcaagttcacccttatatag 18772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 529
Target Start/End: Original strand, 24318895 - 24319032
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||| | ||||||||||||||| | ||| ||| | |||| |||||||||| || || | |  || | || || ||||||||| ||| |||    
T  24318895 ggtggaacgaaaggcgcctgcaggcacgttagcattccgacgatcaagttagtaatggaactgggagaaaa-gtcttaggagagttgtgaaaagtgttgt 24318993  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24318994 gtacattgagggtgaagcaagttcacccttatataggcg 24319032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 507
Target Start/End: Complemental strand, 27846622 - 27846512
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtacct 496  Q
    |||||| ||| ||||||||||||||| ||||| ||| | ||||||||||||||| ||||||| ||| | ||  |||||||||| |||||||  |||||||    
T  27846622 acgaaaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgtaaagtgaattgtacct 27846523  T
Q  497 tgagggtgaag 507  Q
    |||||||||||    
T  27846522 tgagggtgaag 27846512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 535
Target Start/End: Original strand, 23257803 - 23257907
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgt 530  Q
    ||||| |||||||| | |||| ||| || |||||| ||  |||||| |  |||||||  ||||||||||||||||| |||| ||||||||||||||||||    
T  23257803 acgctcaagtcagtgaaggaaatgacaaggagtgtgtagaaagtgtgggaaaagtgaattgtaccttgagggtgaatcaaggtcacccttatataggcgt 23257902  T
Q  531 gtgtg 535  Q
    |||||    
T  23257903 gtgtg 23257907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 483
Target Start/End: Original strand, 18770296 - 18770387
Alignment:
Q  395 tggaacgaaaggtgtctgca--ggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    |||||||||||||| || ||  |||||||||| ||||  ||||| |||||||||||| |||||||||||||||| ||  |||||||||||||    
T  18770296 tggaacgaaaggtgcctacataggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaa 18770387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 19290545 - 19290584
Alignment:
Q  487 atgtgtaccttgagggtgaagcaagttcacccttatatag 526  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19290545 atgtgtaccttaagggtgaagcaagttcacccttatatag 19290584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 483
Target Start/End: Complemental strand, 12127777 - 12127681
Alignment:
Q  388 ttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    |||| ||||| |||||||||  ||||||||||||||| ||||| ||||| |||||||||||| || | |||| | |||| ||  |||||||||||||    
T  12127777 ttcgcggtgggacgaaaggtacctgcaggcacgttagcactccaacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaa 12127681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 507
Target Start/End: Original strand, 18134339 - 18134418
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagag--tgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaag 507  Q
    ||||||||| ||||||||||||||||||||||  |||| || |||| ||||| ||| |||  ||||||||||||||||||    
T  18134339 acgctaaagccagtaatggaattgagaaagagtatgtagaaaaagtattgtgaaaaatgaattgtaccttgagggtgaag 18134418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 424
Target Start/End: Original strand, 17671944 - 17671986
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttag 424  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||    
T  17671944 tgagtcttcatggtggaacgaaaggtgtctgcagacacgttag 17671986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 17626882 - 17626914
Alignment:
Q  392 tggtggaacgaaaggtgtctgcaggcacgttag 424  Q
    |||||||||||||||||||||||| ||||||||    
T  17626882 tggtggaacgaaaggtgtctgcagacacgttag 17626914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 348 - 529
Target Start/End: Complemental strand, 7014 - 6831
Alignment:
Q  348 ggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaa 446  Q
    ||||||||||||||||||| |||||||||  |  ||||| |||||||||||||||||| ||   | |||||||||||  |||  ||||| |||||||||     
T  7014 ggtgtgacggtaacggcttccggcacggcgccgatgagtcttcgtggtggaacgaaagatgctggtaggcacgttaggtctctgacgctcaagtcagtat 6915  T
Q  447 tggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    || || |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6914 tgaaactgagaacgagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacccttgtataggcg 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 297 - 526
Target Start/End: Complemental strand, 11120 - 10889
Alignment:
Q  297 tgatctattcagtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtg 396  Q
    |||||||| | |||||||||||||||| ||||  | |||| ||||| ||||| || | |||||||| ||| ||| |||||  |  ||| | |  | ||||    
T  11120 tgatctatccggtgagaacggttgagtcgcaacggtggcaaagaatgctccgatgagtcggtaacgacttccggtacggcggcgatgaatctctgcggtg 11021  T
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    |||| |||||||| |||||||||||||| |||||| |||| |||||| |||||||| ||| | ||||||| ||||||||||||||||| |||||||||||    
T  11020 gaacaaaaggtgtatgcaggcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgttgtgaaaagtgatgtgtac 10921  T
Q  495 cttgagggtgaagcaagttcacccttatatag 526  Q
    |||||||||||| |||||||||| ||||||||    
T  10920 cttgagggtgaaacaagttcacctttatatag 10889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 394 - 527
Target Start/End: Original strand, 22869 - 23004
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    |||| |||||||||| |||| |||||||||| ||||  ||||| ||||||||||||||| |||||||  |||| ||||||||||||||||| |||| |||    
T  22869 gtgggacgaaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaaagtgacgtg 22968  T
Q  492 taccttgagggtgaagcaagttcacccttatatagg 527  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22969 taccttgagggtgaagcaagttcacccttatgtagg 23004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 391 - 528
Target Start/End: Complemental strand, 4535 - 4396
Alignment:
Q  391 gtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaag-tgat 488  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||| |||||| ||||| || ||| | |||| || ||||||||||| |||||  ||||    
T  4535 gtggtggaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgttatgaaaaatgat 4436  T
Q  489 gtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4435 gtgtaccttgagggtgaagcaagttcacccttatataggc 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 215258 - 215397
Alignment:
Q  397 gaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtac 494  Q
    ||||||||| |||||||||||||||||| | |||| |||| |||||||||||| || ||| | ||||||| ||||||||||||||||| ||| |||||||    
T  215258 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtac 215357  T
Q  495 cttgagggtgaagcaagttcacccttatataggcgtgtgt 534  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  215358 cttgagggtgaagcaagttcatccttatatagccgtgtgt 215397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 394 - 528
Target Start/End: Complemental strand, 24576691 - 24576555
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtg 491  Q
    ||||||||||||||| ||||||||||||||  ||||  ||||| ||||||||||||||| | | || |||||| ||||||||||||||||| || |||||    
T  24576691 gtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgttgtgaaaagtaatgtg 24576592  T
Q  492 taccttgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24576591 taccttgagggtgaaggaagttcacccttatataggc 24576555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 393 - 525
Target Start/End: Complemental strand, 4565502 - 4565368
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||||||||||||||||||||||||| ||||| ||||| ||  | |||| ||||||| || ||| | |||  |||||||||||||||||||| ||| |||    
T  4565502 ggtggaacgaaaggtgtctgcaggcatgttagcactccgacaatcaagttagtaatgaaactgaaagagaaagtataagaagtgttgtgaaaagtgttgt 4565403  T
Q  491 gtaccttgagggtgaagcaagttcacccttatata 525  Q
    |||||||||||||||||||||||||||||||||||    
T  4565402 gtaccttgagggtgaagcaagttcacccttatata 4565368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 333 - 527
Target Start/End: Original strand, 21416660 - 21416856
Alignment:
Q  333 ggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-a 431  Q
    |||||| ||| ||||||||||||||||| ||||||| | |||||  |  ||||| |||| | |||| |  |||||||||||| || |||||| ||||| |    
T  21416660 ggcagataatgctccggtgtgacggtaatggctttcagtacggcggcgttgagtattcgcgatggatctgaaggtgtctgcatgctcgttagcactccga 21416759  T
Q  432 cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaag-tgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
    |||| |||||||||||| || ||||||||||||| ||  |||||||||||||  |||   ||||||| |||||||||||||||||||||| ||||||    
T  21416760 cgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcgtaccttaagggtgaagcaagttcacccttgtatagg 21416856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 527
Target Start/End: Complemental strand, 11776431 - 11776216
Alignment:
Q  306 cagtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaag 405  Q
    |||||||||||||||| | ||||  |||||||||||| ||| |||||||| |||||   |||||||||| |     ||||| || | ||||| |||||||    
T  11776431 cagtgagaacggttgaatggcaacggcggcagagaatgctctggtgtgacagtaactattttcggcacgacggagatgagtatttgcggtgggacgaaag 11776332  T
Q  406 gtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggt 503  Q
     ||| |||||||||||||| ||||| ||||| ||        ||||| ||||||||||||| |||| ||||||| |||| ||||| ||||||||||||||    
T  11776331 atgtttgcaggcacgttagcactccgacgctcaa--------tggaactgagaaagagtgtttaaggagtgttgggaaaagtgatatgtaccttgagggt 11776240  T
Q  504 gaagcaagttcacccttatatagg 527  Q
    ||| |||||||||| |||||||||    
T  11776239 gaaacaagttcacctttatatagg 11776216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 344 - 527
Target Start/End: Original strand, 24507391 - 24507575
Alignment:
Q  344 ctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtca 442  Q
    |||| |||||||||| |||| |||||| |||||   | ||||| || | |||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||    
T  24507391 ctccagtgtgacggtgacgg-tttcggtacggcggtaatgagtctttgcggtggagcgaaaggtgtctgcatgcacgttagtactccaacgatcaagtca 24507489  T
Q  443 gtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||| ||||||||||||| ||  |||||||||| |||||||    |||||||||||||||| | |||||||| ||||||||    
T  24507490 ataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaggttcacccatatatagg 24507575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 30477629 - 30477763
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtacct 496  Q
    ||||||| |||||||| ||||||||| |||||| |||| |||||||||| | || ||||||||||||| ||  ||||||||||||| ||||    |||||    
T  30477629 acgaaagatgtctgcatgcacgttagcactccaacgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacct 30477728  T
Q  497 tgagggtgaagcaagttcacccttatataggcgtg 531  Q
    ||||||||||| ||  |||||||||||||||||||    
T  30477729 tgagggtgaagtaatgtcacccttatataggcgtg 30477763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 3459586 - 3459455
Alignment:
Q  400 cgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgtt-gtg-aaagtgatgtgtacct 496  Q
    ||||||||| ||||||||||||||| |||||  |||| ||||||||||||||| |||| |||||||| ||  ||||||| ||| ||||| |   ||||||    
T  3459586 cgaaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtacct 3459487  T
Q  497 tgagggtgaagcaagttcacccttatataggcg 529  Q
    ||| |||||||||||||||||||||||||||||    
T  3459486 tga-ggtgaagcaagttcacccttatataggcg 3459455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 461 - 525
Target Start/End: Original strand, 23243835 - 23243900
Alignment:
Q  461 agtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatata 525  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  23243835 agtgtgtaagaagtgttgtgaaaagtgatgtgtatcttgagggtgaagcaagttcactcttatata 23243900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 469 - 529
Target Start/End: Original strand, 20055623 - 20055683
Alignment:
Q  469 agaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  20055623 agaagtgttgtgaaaagtgatgtgtacctt-agggtgaagcaagttcatccttatataggcg 20055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 528
Target Start/End: Original strand, 13754746 - 13754877
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtacct 496  Q
    |||||||||| |||| |||||||||  ||| || |||| |||||||||||| || ||||||||||||| ||  |||||||||| |||||||    |||||    
T  13754746 acgaaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcctacct 13754845  T
Q  497 tgagggtgaagcaagttcacccttatataggc 528  Q
    |||||||||||| |  |||| |||||||||||    
T  13754846 tgagggtgaagctaagtcactcttatataggc 13754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 529
Target Start/End: Complemental strand, 17698349 - 17698256
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||||||||||  |||||||||||| ||  |||||||||| |||||||  | ||| ||||||||||||||||  ||||| ||||||||||    
T  17698349 aagtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagcaaggccacccatatataggcg 17698256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 23269228 - 23269301
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgt 465  Q
    ||||||||||||||||||| |||||| ||||| ||||| || || ||||||||||||||| ||| |||||||||    
T  23269228 ggtggaacgaaaggtgtctacaggcaagttagcactccaacacttaagtcagtaatggaactgataaagagtgt 23269301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 528
Target Start/End: Original strand, 18322915 - 18323062
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga 481  Q
    |||| |||| |||||||| |||||||  ||||| || ||||  |||||| |||| ||||||||||| ||| ||||||||| ||| ||  || ||||||||    
T  18322915 gagtcttcgcggtggaacaaaaggtgcatgcagacatgttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtga 18323014  T
Q  482 aa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    || ||||    ||| |||||| ||||||||| ||||||||||||||||    
T  18323015 aaagtgaatcatacattgaggatgaagcaaggtcacccttatataggc 18323062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 14666948 - 14666811
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgt 490  Q
    |||||||| ||||||| ||||||||||||||| ||||| ||| | |||||| |||||||||||||| | | | | |  | |  |||||| |||||  |||    
T  14666948 ggtggaacaaaaggtgcctgcaggcacgttagcactccgacgatcaagtcaataatggaattgagagaaaat-tctttggacagttgtgaaaagttttgt 14666850  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||||| ||||||||| |||||||||||||| ||||||    
T  14666849 gtaccttaagggtgaagaaagttcacccttatgtaggcg 14666811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 430
Target Start/End: Original strand, 20055476 - 20055598
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||| ||||||| ||||  | |||||||||| ||||| ||   | |||||||||| ||| |||||  |  ||| | |||| ||||||||||| |||    
T  20055476 gtgagaacagttgagtcgcaacggtggcagagaatgctccgatgaatcagtaacggcttccggtacggcggcgatgaatcttcgcggtggaacgaagggt 20055575  T
Q  408 gtctgcaggcacgttagaactcc 430  Q
    ||||||||||||||||| |||||    
T  20055576 gtctgcaggcacgttagtactcc 20055598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 6928154 - 6928069
Alignment:
Q  437 aagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtgtaccttgagggtgaagcaagttcaccctta 521  Q
    ||||||||||||||| ||||||||||||| ||  |||||||||| |||||||    |||||||||||||||  || ||||||||||    
T  6928154 aagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaattaatttcaccctta 6928069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 1909816 - 1909744
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgt 465  Q
    |||||||||||||||  ||||| |||||||| | | || ||||||||||||||||| || |||||||||||||    
T  1909816 gtggaacgaaaggtgcatgcagacacgttagcatttcaacgctaaagtcagtaatgaaactgagaaagagtgt 1909744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 529
Target Start/End: Complemental strand, 26917017 - 26916869
Alignment:
Q  383 gagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg- 480  Q
    |||| |||||| ||||||||||||||  |  |||||||||||  | | | |||| ||||||||||||||| ||||| ||||||| ||  ||||||||||     
T  26917017 gagtcttcgtgatggaacgaaaggtgcatttaggcacgttagcgcactaacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtga 26916918  T
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||||    |||||||||  ||||||||  || ||||||||||||||    
T  26916917 aaagtgagtcataccttgagcatgaagcaatgtcgcccttatataggcg 26916869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 457
Target Start/End: Complemental strand, 17927815 - 17927748
Alignment:
Q  391 gtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgaga 457  Q
    ||||||| ||||||||||  |||| ||||||||| |||||| |||| ||||||||||||||| |||||    
T  17927815 gtggtgggacgaaaggtgcatgcatgcacgttagcactccaacgcttaagtcagtaatggaactgaga 17927748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 480
Target Start/End: Original strand, 13764977 - 13765059
Alignment:
Q  399 acgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg 480  Q
    |||||||||||||||||||||||||  ||||| | | | |||| ||||||| || ||||||||||||| ||  ||||||||||    
T  13764977 acgaaaggtgtctgcaggcacgttaagactccaatgttcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtg 13765059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 459
Target Start/End: Original strand, 15058006 - 15058084
Alignment:
Q  382 tgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaact-ccacgctaaagtcagtaatggaattgagaaa 459  Q
    ||||| || ||||||||||||||||||  |||||||||||||| ||| | ||||  |||| ||||||| ||||||||||    
T  15058006 tgagtctttgtggtggaacgaaaggtgcatgcaggcacgttagcactacaacgcacaagttagtaatgaaattgagaaa 15058084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 529
Target Start/End: Original strand, 16214713 - 16214747
Alignment:
Q  495 cttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| |||||||||||||||||||||||||||||    
T  16214713 cttgaaggtgaagcaagttcacccttatataggcg 16214747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 348 - 529
Target Start/End: Original strand, 6235 - 6418
Alignment:
Q  348 ggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaa 446  Q
    ||||||||||||||| ||||||| ||||||||  ||||| |  |  ||||||| |||||||| |||||||||||||| ||| | | ||| ||||||||||    
T  6235 ggtgtgacggtaacgactttcggtacggcaacgttgagtctctgcagtggaacaaaaggtgtttgcaggcacgttagcacttcgaagctcaagtcagtaa 6334  T
Q  447 tggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| ||||||| ||||| ||  ||||||||||||| ||||   |||||||||| |||||||||||||| |||||||||||||    
T  6335 tggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgagcgtgaagcaagttcatccttatataggcg 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 391 - 531
Target Start/End: Original strand, 40776 - 40918
Alignment:
Q  391 gtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgat 488  Q
    ||||| |||||||||| |  |||||||||||||| |||||| |||| |||||||| |||||| ||| | |||| || || |||||||| ||||| |||||    
T  40776 gtggtagaacgaaaggcgcatgcaggcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgat 40875  T
Q  489 gtgtaccttgagggtgaagcaagttcacccttatataggcgtg 531  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  40876 gtgtaccttgagggtgaagcaagttcacccttttataggcgtg 40918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 11413 - 11628
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| |||| |||||||||||||  | | |||||||||||| |||||  ||||||||  |   |||| |||  ||||||||||| |||    
T  11413 gtgagaacggttgagtagcaacagcggcagagaatgtttctgtgtgacggtaaaggcttctggcacggcggcgaagagtcttcaaggtggaacgaatggt 11512  T
Q  408 gtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtga 505  Q
    | || ||  || ||||| |||||| |||| |  ||| |||||||| ||||||||||||||||||   |||||||||| |||||||| |||||||||||||    
T  11513 gcctacaaccatgttagcactccaacgctcacctcattaatggaactgagaaagagtgtataag---tgttgtgaaaagtgatgtg-accttgagggtga 11608  T
Q  506 agcaagttcacccttatata 525  Q
    | ||||||||||||||||||    
T  11609 accaagttcacccttatata 11628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 529
Target Start/End: Complemental strand, 326 - 213
Alignment:
Q  419 cgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatg-tgtaccttgagggtgaagcaagttca 515  Q
    |||||| ||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||   ||||||||||||||||||||||||||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgagaatgtaccttgagggtgaagcaagttca 227  T
Q  516 cccttatataggcg 529  Q
    ||||||| ||||||    
T  226 cccttatctaggcg 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 526
Target Start/End: Complemental strand, 21726 - 21592
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtg-aaagtgatgtg 491  Q
    ||||||||||  ||| |||| |||||||||| |||||| | || ||||||||| || || ||| | ||||||| |||||||||||||| |||||||||||    
T  21726 gtggaacgaagtgtgcctgcgggcacgttagcactccaacactcaagtcagtattgaaactgaaagagagtgtttaagaagtgttgtggaaagtgatgtg 21627  T
Q  492 taccttgagggtgaagcaagttcacccttatatag 526  Q
    ||||||||||||||||||| |||||||||| ||||    
T  21626 taccttgagggtgaagcaaattcacccttacatag 21592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 527
Target Start/End: Original strand, 4937 - 5156
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggt 407  Q
    |||||||||||||||| ||||  ||||||||||||  ||||||||||| |||| ||||| ||||||||   |   |||| |||| |||||||||||||||    
T  4937 gtgagaacggttgagtagcaacggcggcagagaatgttccggtgtgacagtaaaggcttccggcacggtggcgaagagtcttcgaggtggaacgaaaggt 5036  T
Q  408 gtctgcagg---cacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgaggg 502  Q
    | || ||     |||||||||||||| || || | |||| |||      ||||||||  ||| ||||||||||||||||| |||| ||| ||||||||||    
T  5037 gcctacaacaaccacgttagaactccgacactcacgtcattaac-----tgagaaaggttgtgtaagaagtgttgtgaaaagtgacgtgaaccttgaggg 5131  T
Q  503 tgaagcaagttcacccttatatagg 527  Q
    |||||||||||||||||||||||||    
T  5132 tgaagcaagttcacccttatatagg 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 528
Target Start/End: Original strand, 42231 - 42367
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgt 490  Q
    |||| ||||||||||| |||||||||| |||| ||| | ||| | |||||| |||||||| ||| | | |  |||| | ||||||||||||| ||| |||    
T  42231 ggtgaaacgaaaggtggctgcaggcacattagcacttcgacgatcaagtcaataatggaactgatagaaaa-gtattataagtgttgtgaaaagtgttgt 42329  T
Q  491 gtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42330 gtaccttgagggtgaagcaagttcacccttatataggc 42367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 527
Target Start/End: Original strand, 13904 - 14040
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactccac-gctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtga-aagtgatgt 490  Q
    ||||| ||||||||||  || | ||||||||| ||||||  ||| |||||||||||| || ||||||||||||| ||  ||||||||||| ||||||       
T  13904 ggtgggacgaaaggtgcatgaatgcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaatc 14003  T
Q  491 gtaccttgagggtgaagcaagttcacccttatatagg 527  Q
     |||||||||||||||||||| |||||||||||||||    
T  14004 ataccttgagggtgaagcaagatcacccttatatagg 14040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 417 - 527
Target Start/End: Complemental strand, 15515 - 15403
Alignment:
Q  417 cacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttc 514  Q
    |||||||| ||||| |||||  |||||||||||||| ||||||||||| | ||  ||||||||||||| ||||    |||||||||||||||||||||||    
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttc 15416  T
Q  515 acccttatatagg 527  Q
    |||||||||||||    
T  15415 acccttatatagg 15403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 463
Target Start/End: Complemental strand, 10903 - 10756
Alignment:
Q  319 tgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggcaacagtga---gttttcgtggtggaacgaaaggtgtctgcag 415  Q
    ||||| |||| ||||||| | ||| |||||| |||| | ||| ||||| ||||||||| |||||||   || |||||||||||| |||||||||||| ||    
T  10903 tgagtggcaacagcggcaaataatgctccggcgtgatgataa-ggcttccggcacggcgacagtgatgagtcttcgtggtggaatgaaaggtgtctgtag 10805  T
Q  416 gcacgttagaactcc-acgctaaagtcagtaatggaattgagaaagagt 463  Q
    ||| ||||| ||||| ||| | ||||||||||||||| |||||||||||    
T  10804 gcatgttagcactccgacgttcaagtcagtaatggaactgagaaagagt 10756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 483
Target Start/End: Original strand, 35186 - 35326
Alignment:
Q  344 ctccggtgtgacggtaacggctttcggcacggcaacagtgagttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactc-cacgctaaagtca 442  Q
    ||||||||||| ||||||||||| ||| |||||  |  ||||| ||||| ||| ||||||| |||  |||||||||||||| ||||  || || ||||||    
T  35186 ctccggtgtgatggtaacggcttccggtacggcggcgttgagtcttcgtagtgcaacgaaatgtgcttgcaggcacgttagcactctgacactcaagtca 35285  T
Q  443 gtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    |||| |||| ||||||||||||| |   |||||||||||||    
T  35286 gtaacggaactgagaaagagtgtgtggaaagtgttgtgaaa 35326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 529
Target Start/End: Complemental strand, 53292 - 53244
Alignment:
Q  481 aaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    |||||| ||||||||  |||| |||||||||||||||||||||||||||    
T  53292 aaagtgttgtgtacccagaggttgaagcaagttcacccttatataggcg 53244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 528
Target Start/End: Complemental strand, 68891 - 68774
Alignment:
Q  411 tgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagc 508  Q
    ||||| |||||||| |||||| |||| |||| |||||||||| ||||||||||| || ||  |||||||||||| ||||    ||||||||||| |||||    
T  68891 tgcagacacgttagcactccaacgctcaagttagtaatggaactgagaaagagtatagaa--agtgttgtgaaaagtgaatcataccttgagggagaagc 68794  T
Q  509 aagttcacccttatataggc 528  Q
    ||| ||||||||||||||||    
T  68793 aaggtcacccttatataggc 68774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 528
Target Start/End: Complemental strand, 95926 - 95782
Alignment:
Q  386 ttttcgtggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa- 483  Q
    |||||| ||||| || ||||||  ||||||||||||||  ||| || |||| |||| |||||||||| ||||||||||||  ||  |||||||||||||     
T  95926 ttttcgcggtgggacaaaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaa 95827  T
Q  484 gtgatgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||    |||||| ||||||||||||  ||||||||||||||||    
T  95826 gtgaatcataccttcagggtgaagcaacgtcacccttatataggc 95782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 4280 - 4349
Alignment:
Q  308 gtgagaacggttgagttgcaatagcggcagagaattctccggtgtgacggtaacggctttcggcacggca 377  Q
    |||||||||||||||| |||||  | | ||||||| |||||||||||||||||| |||| ||||||||||    
T  4280 gtgagaacggttgagtggcaatgacagaagagaatgctccggtgtgacggtaacagcttccggcacggca 4349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 528
Target Start/End: Original strand, 8954 - 9093
Alignment:
Q  394 gtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattg----agaaagagtgtataagaagtgttgtgaaag-tga 487  Q
    |||||||||| |||| |||||| |||||||| |||||| |||| ||||  ||||||||| ||    | ||| ||| | |||||||||||||||||  | |    
T  8954 gtggaacgaa-ggtgcctgcagacacgttagcactccaacgctcaagtatgtaatggaactggacaaaaaaaagtttgtaagaagtgttgtgaaaaatta 9052  T
Q  488 tgtgtaccttgagggtgaagcaagttcacccttatataggc 528  Q
    ||||||||||||||||| || | ||||||||||||||||||    
T  9053 tgtgtaccttgagggtggagaaggttcacccttatataggc 9093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 483
Target Start/End: Original strand, 7867 - 7958
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcca-cgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa 483  Q
    ||||||| ||||||||  || ||||||||||| |||| | |||| || ||||||||| |||||||||||||||| ||  |||||||||||||    
T  7867 ggtggaaggaaaggtgcatgtaggcacgttagcactctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaa 7958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 529
Target Start/End: Complemental strand, 20567 - 20468
Alignment:
Q  431 acgctaaagtcagtaatggaattgagaaagagtgtataagaagtgttgtgaaa-gtgatgtgtaccttgagggtgaagcaagttcacccttatataggcg 529  Q
    ||||| |||||| ||| |||| ||||||||||||| ||  || |||| ||||| ||||||||||||||| |||||||  || ||||||| ||||||||||    
T  20567 acgctcaagtcactaaaggaactgagaaagagtgtgtagaaaatgttatgaaaagtgatgtgtaccttgtgggtgaaataaattcacccatatataggcg 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 69333 - 69281
Alignment:
Q  393 ggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagt 444  Q
    |||||||| ||||||| ||||||||||||||| ||||| ||||| ||||||||    
T  69333 ggtggaacaaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagt 69281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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