View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7882_low_12 (Length: 258)
Name: NF7882_low_12
Description: NF7882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7882_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 3659831 - 3660094
Alignment:
| Q |
1 |
tcacaaacattaccattctctgcaaatctcacactcttcttcactctaggttgaattacttgcctttgaacaaagacaccatttttgttcccatcccttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3659831 |
tcacaaacattaccattctctgcaaatctcacactcttcttcactctaggttgaattacttgcctttgaacaaagacaccatttttgttcccatcccttc |
3659930 |
T |
|
| Q |
101 |
tagcgaccacaacatcagttactccatcgtcatcata------------atcatgaacgctctcctcattctctaaaccttcctcatcatctccataaac |
188 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3659931 |
tagcgaccacaacatcagttactccatcgtcatcataatcatcatcatcatcatgaacgctctcctcattctctaaaccttcctcatcatctccataaac |
3660030 |
T |
|
| Q |
189 |
cttacacaatttgctaatcttctcaactctccccctcaaattcttcaacagcttcttcttctca |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3660031 |
cttacacaatttgctaatcttctcaactctccccctcaaattcttcaacagcttcttcttctca |
3660094 |
T |
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