View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7883_low_9 (Length: 437)

Name: NF7883_low_9
Description: NF7883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7883_low_9
NF7883_low_9
[»] chr7 (38 HSPs)
chr7 (146-373)||(31940836-31941070)
chr7 (378-418)||(26945723-26945763)
chr7 (378-418)||(44426593-44426633)
chr7 (378-418)||(46004544-46004584)
chr7 (378-415)||(38837741-38837778)
chr7 (378-418)||(7845106-7845146)
chr7 (378-418)||(41065978-41066018)
chr7 (378-418)||(43742244-43742284)
chr7 (378-413)||(31365266-31365301)
chr7 (380-418)||(34227885-34227923)
chr7 (382-415)||(11732041-11732074)
chr7 (382-415)||(15973859-15973892)
chr7 (381-418)||(26945512-26945549)
chr7 (382-415)||(46572573-46572606)
chr7 (378-414)||(6620614-6620650)
chr7 (382-418)||(34227675-34227711)
chr7 (382-418)||(44426808-44426844)
chr7 (383-415)||(48692062-48692094)
chr7 (384-415)||(16933136-16933167)
chr7 (384-415)||(16938519-16938550)
chr7 (384-415)||(30884115-30884146)
chr7 (384-415)||(31660211-31660242)
chr7 (384-415)||(33798745-33798776)
chr7 (384-415)||(35737090-35737121)
chr7 (384-415)||(41911005-41911036)
chr7 (384-415)||(46358662-46358693)
chr7 (384-415)||(47340289-47340320)
chr7 (384-415)||(48830611-48830642)
chr7 (384-414)||(763840-763870)
chr7 (377-411)||(6620813-6620847)
chr7 (385-415)||(15974964-15974994)
chr7 (385-415)||(30428880-30428910)
chr7 (378-415)||(5728620-5728657)
chr7 (381-418)||(5728889-5728926)
chr7 (376-413)||(5758324-5758361)
chr7 (382-415)||(32685843-32685876)
chr7 (381-418)||(38837538-38837575)
chr7 (378-418)||(7843728-7843768)
[»] chr4 (64 HSPs)
chr4 (376-418)||(21995663-21995705)
chr4 (378-418)||(17109927-17109967)
chr4 (374-418)||(31763117-31763161)
chr4 (378-418)||(36924236-36924276)
chr4 (376-419)||(33883287-33883330)
chr4 (380-418)||(1492669-1492707)
chr4 (376-418)||(6841814-6841856)
chr4 (372-418)||(9813154-9813200)
chr4 (377-418)||(8157298-8157339)
chr4 (381-418)||(8165760-8165797)
chr4 (377-418)||(53865252-53865293)
chr4 (377-418)||(54895592-54895633)
chr4 (378-418)||(562770-562810)
chr4 (382-418)||(2124343-2124379)
chr4 (381-417)||(12722735-12722771)
chr4 (378-418)||(12722947-12722987)
chr4 (378-418)||(25715736-25715776)
chr4 (382-418)||(33819690-33819726)
chr4 (378-418)||(33871287-33871327)
chr4 (378-418)||(43374442-43374482)
chr4 (378-418)||(54895399-54895439)
chr4 (379-418)||(2124554-2124593)
chr4 (377-415)||(10473660-10473698)
chr4 (377-415)||(22180200-22180238)
chr4 (384-418)||(25715644-25715678)
chr4 (381-415)||(30779341-30779375)
chr4 (380-418)||(36309413-36309451)
chr4 (382-415)||(26577260-26577293)
chr4 (382-415)||(37059710-37059743)
chr4 (381-418)||(43375530-43375567)
chr4 (382-415)||(45256907-45256940)
chr4 (382-418)||(31762928-31762964)
chr4 (382-418)||(36309626-36309662)
chr4 (378-418)||(38010719-38010759)
chr4 (384-415)||(11786116-11786147)
chr4 (384-415)||(11798283-11798314)
chr4 (384-415)||(13635618-13635649)
chr4 (384-415)||(15051029-15051060)
chr4 (384-415)||(30358849-30358880)
chr4 (384-415)||(30597841-30597872)
chr4 (379-418)||(33883492-33883531)
chr4 (384-415)||(49425950-49425981)
chr4 (384-415)||(50644682-50644713)
chr4 (387-418)||(51076901-51076932)
chr4 (384-415)||(53441462-53441493)
chr4 (380-418)||(16475029-16475067)
chr4 (381-411)||(17109717-17109747)
chr4 (385-415)||(22181273-22181303)
chr4 (385-415)||(27764247-27764277)
chr4 (385-415)||(36621729-36621759)
chr4 (385-415)||(45255982-45256012)
chr4 (385-415)||(49492406-49492436)
chr4 (385-415)||(50643750-50643780)
chr4 (386-415)||(639006-639035)
chr4 (382-415)||(21098144-21098177)
chr4 (377-418)||(41025055-41025096)
chr4 (378-415)||(47567891-47567928)
chr4 (378-415)||(48076907-48076944)
chr4 (381-418)||(53526461-53526498)
chr4 (382-414)||(4169441-4169473)
chr4 (378-418)||(10374038-10374078)
chr4 (378-418)||(37059924-37059964)
chr4 (378-418)||(38563970-38564010)
chr4 (378-414)||(53865059-53865095)
[»] chr3 (46 HSPs)
chr3 (376-418)||(36185914-36185956)
chr3 (377-418)||(50416573-50416614)
chr3 (375-418)||(12974004-12974047)
chr3 (381-418)||(8036798-8036835)
chr3 (378-415)||(12974202-12974239)
chr3 (378-415)||(27068527-27068564)
chr3 (381-418)||(50416478-50416515)
chr3 (378-418)||(8036998-8037038)
chr3 (378-417)||(47729266-47729305)
chr3 (377-415)||(27446225-27446263)
chr3 (376-418)||(49053435-49053477)
chr3 (377-415)||(51361517-51361555)
chr3 (382-415)||(8719149-8719182)
chr3 (382-415)||(9071036-9071069)
chr3 (378-415)||(16653492-16653529)
chr3 (378-415)||(19012387-19012424)
chr3 (381-418)||(19012571-19012608)
chr3 (385-418)||(47924375-47924408)
chr3 (382-418)||(36185725-36185761)
chr3 (384-415)||(3475300-3475331)
chr3 (384-415)||(6097577-6097608)
chr3 (384-415)||(9106409-9106440)
chr3 (384-415)||(9595873-9595904)
chr3 (384-415)||(10986494-10986525)
chr3 (376-415)||(16276662-16276701)
chr3 (384-415)||(17620737-17620768)
chr3 (384-415)||(19284813-19284844)
chr3 (376-407)||(30794825-30794856)
chr3 (384-415)||(30947804-30947835)
chr3 (384-415)||(34562400-34562431)
chr3 (384-415)||(54379304-54379335)
chr3 (385-415)||(8718108-8718138)
chr3 (385-415)||(9069995-9070025)
chr3 (385-415)||(19385343-19385373)
chr3 (384-414)||(26662431-26662461)
chr3 (380-418)||(38345277-38345315)
chr3 (385-415)||(50755204-50755234)
chr3 (385-415)||(51362466-51362496)
chr3 (386-415)||(2941821-2941850)
chr3 (382-415)||(19384380-19384413)
chr3 (378-415)||(23756309-23756346)
chr3 (378-419)||(33854801-33854842)
chr3 (381-418)||(47225758-47225795)
chr3 (385-418)||(47225857-47225890)
chr3 (378-418)||(20127182-20127222)
chr3 (386-418)||(21175277-21175309)
[»] chr2 (37 HSPs)
chr2 (376-418)||(31783786-31783828)
chr2 (378-418)||(24183606-24183646)
chr2 (375-418)||(22596513-22596556)
chr2 (376-418)||(31711503-31711545)
chr2 (376-418)||(34726805-34726847)
chr2 (381-418)||(20661394-20661431)
chr2 (377-418)||(37867148-37867189)
chr2 (378-418)||(19246657-19246697)
chr2 (378-418)||(42364487-42364527)
chr2 (378-418)||(44915500-44915540)
chr2 (378-417)||(20194037-20194076)
chr2 (381-415)||(31783997-31784031)
chr2 (384-418)||(34726605-34726639)
chr2 (381-414)||(12449052-12449085)
chr2 (378-415)||(12449255-12449292)
chr2 (381-418)||(22596302-22596339)
chr2 (381-418)||(25575321-25575358)
chr2 (378-418)||(15253029-15253069)
chr2 (382-418)||(16111714-16111750)
chr2 (378-418)||(20661604-20661644)
chr2 (378-418)||(23182234-23182274)
chr2 (378-418)||(23593491-23593531)
chr2 (382-418)||(37867364-37867400)
chr2 (382-418)||(42364702-42364738)
chr2 (384-415)||(1292072-1292103)
chr2 (384-415)||(7487147-7487178)
chr2 (384-415)||(39355177-39355208)
chr2 (384-415)||(41345088-41345119)
chr2 (385-415)||(18298139-18298169)
chr2 (385-415)||(25192899-25192929)
chr2 (381-418)||(15150300-15150337)
chr2 (382-415)||(18297167-18297200)
chr2 (381-418)||(22588316-22588353)
chr2 (381-418)||(44915289-44915326)
chr2 (383-415)||(25194003-25194035)
chr2 (382-418)||(30777294-30777330)
chr2 (379-415)||(43823887-43823923)
[»] chr6 (26 HSPs)
chr6 (377-418)||(10588962-10589003)
chr6 (378-418)||(19284366-19284406)
chr6 (378-418)||(21384998-21385038)
chr6 (381-418)||(22857486-22857523)
chr6 (377-418)||(25119479-25119520)
chr6 (378-418)||(22857686-22857726)
chr6 (377-418)||(10698571-10698612)
chr6 (384-417)||(14237779-14237812)
chr6 (384-417)||(20522858-20522891)
chr6 (381-418)||(25119104-25119141)
chr6 (376-417)||(26713184-26713224)
chr6 (378-418)||(7371107-7371147)
chr6 (382-418)||(19281282-19281318)
chr6 (384-415)||(6900945-6900976)
chr6 (384-415)||(7765416-7765447)
chr6 (384-415)||(15493316-15493347)
chr6 (384-415)||(34869956-34869987)
chr6 (385-415)||(12394408-12394438)
chr6 (385-415)||(15035003-15035033)
chr6 (377-415)||(18612374-18612412)
chr6 (384-414)||(18755664-18755694)
chr6 (385-415)||(33346399-33346429)
chr6 (385-415)||(34399648-34399678)
chr6 (382-411)||(878406-878435)
chr6 (378-415)||(11140467-11140504)
chr6 (381-418)||(21384787-21384824)
[»] chr5 (42 HSPs)
chr5 (377-418)||(3340584-3340625)
chr5 (378-418)||(39861789-39861829)
chr5 (373-415)||(15559039-15559081)
chr5 (377-418)||(11660991-11661032)
chr5 (377-418)||(20696336-20696377)
chr5 (377-418)||(39086511-39086552)
chr5 (381-417)||(11660791-11660827)
chr5 (378-418)||(16552242-16552282)
chr5 (378-414)||(20134412-20134448)
chr5 (378-418)||(23155520-23155560)
chr5 (378-418)||(39166349-39166389)
chr5 (378-417)||(5411766-5411805)
chr5 (382-417)||(35662066-35662101)
chr5 (381-415)||(22695552-22695586)
chr5 (381-415)||(25545584-25545618)
chr5 (381-418)||(20134197-20134234)
chr5 (373-418)||(22672006-22672051)
chr5 (377-414)||(36864061-36864098)
chr5 (378-418)||(7286748-7286788)
chr5 (382-418)||(35662242-35662278)
chr5 (384-415)||(3883928-3883959)
chr5 (384-415)||(13553125-13553156)
chr5 (384-415)||(14394610-14394641)
chr5 (384-415)||(14940249-14940280)
chr5 (376-415)||(25545570-25545609)
chr5 (384-415)||(26637730-26637761)
chr5 (384-415)||(37456822-37456853)
chr5 (383-418)||(39861579-39861614)
chr5 (380-411)||(42746516-42746547)
chr5 (385-415)||(13362777-13362807)
chr5 (381-418)||(15059642-15059680)
chr5 (385-415)||(25017245-25017275)
chr5 (385-415)||(28070181-28070211)
chr5 (385-418)||(703732-703765)
chr5 (381-414)||(3340792-3340825)
chr5 (382-415)||(13363806-13363839)
chr5 (385-414)||(22830801-22830830)
chr5 (382-415)||(28069246-28069279)
chr5 (385-414)||(39086719-39086748)
chr5 (386-418)||(5630280-5630312)
chr5 (382-418)||(7286963-7286998)
chr5 (382-414)||(36864281-36864313)
[»] scaffold0129 (1 HSPs)
scaffold0129 (378-418)||(20129-20169)
[»] scaffold0102 (3 HSPs)
scaffold0102 (378-418)||(33611-33651)
scaffold0102 (381-415)||(33828-33862)
scaffold0102 (378-414)||(15914-15950)
[»] chr8 (42 HSPs)
chr8 (378-418)||(17792901-17792941)
chr8 (377-414)||(23567480-23567517)
chr8 (378-419)||(24473252-24473293)
chr8 (381-418)||(35448619-35448656)
chr8 (378-418)||(10586070-10586110)
chr8 (378-418)||(15808880-15808920)
chr8 (381-417)||(15809850-15809886)
chr8 (378-414)||(17656613-17656649)
chr8 (378-417)||(18161283-18161322)
chr8 (378-417)||(34343244-34343283)
chr8 (381-419)||(186089-186127)
chr8 (385-418)||(1672940-1672973)
chr8 (382-415)||(4835517-4835550)
chr8 (376-413)||(8439202-8439239)
chr8 (385-418)||(27506708-27506741)
chr8 (378-414)||(185876-185912)
chr8 (382-418)||(18757337-18757373)
chr8 (383-415)||(39657708-39657740)
chr8 (384-415)||(1149916-1149947)
chr8 (384-415)||(10237496-10237527)
chr8 (384-415)||(15227172-15227203)
chr8 (384-415)||(23397455-23397486)
chr8 (383-418)||(23567652-23567687)
chr8 (375-418)||(34343460-34343503)
chr8 (384-415)||(34633214-34633245)
chr8 (384-415)||(34647172-34647203)
chr8 (384-415)||(35301630-35301661)
chr8 (385-415)||(1208716-1208746)
chr8 (385-415)||(32987473-32987503)
chr8 (385-415)||(39021982-39022012)
chr8 (384-414)||(40022389-40022419)
chr8 (385-415)||(42433708-42433738)
chr8 (386-415)||(1209798-1209827)
chr8 (382-415)||(2751247-2751280)
chr8 (336-369)||(10210404-10210437)
chr8 (382-415)||(15259854-15259887)
chr8 (378-415)||(21120187-21120224)
chr8 (381-418)||(23347730-23347767)
chr8 (381-417)||(45409403-45409440)
chr8 (383-415)||(7059177-7059209)
chr8 (382-418)||(32644046-32644081)
chr8 (374-414)||(41451248-41451288)
[»] chr1 (50 HSPs)
chr1 (378-418)||(9041060-9041100)
chr1 (378-418)||(17893282-17893322)
chr1 (378-418)||(33156987-33157027)
chr1 (376-418)||(10974626-10974668)
chr1 (381-418)||(14229170-14229207)
chr1 (382-419)||(17811291-17811328)
chr1 (375-415)||(1395363-1395403)
chr1 (382-418)||(9628608-9628644)
chr1 (378-418)||(12070619-12070659)
chr1 (378-418)||(31763770-31763810)
chr1 (381-417)||(31763983-31764019)
chr1 (378-418)||(32595099-32595139)
chr1 (382-418)||(42134142-42134178)
chr1 (378-414)||(49992513-49992549)
chr1 (384-418)||(17893073-17893107)
chr1 (373-415)||(23817452-23817494)
chr1 (384-418)||(32595292-32595326)
chr1 (378-415)||(12796418-12796455)
chr1 (381-418)||(14229370-14229407)
chr1 (381-414)||(32143782-32143815)
chr1 (381-418)||(42133942-42133979)
chr1 (378-414)||(11354524-11354560)
chr1 (377-413)||(11422584-11422620)
chr1 (378-418)||(14389839-14389879)
chr1 (382-418)||(18928964-18929000)
chr1 (382-414)||(29945429-29945461)
chr1 (386-418)||(45849111-45849143)
chr1 (384-415)||(6314258-6314289)
chr1 (384-415)||(16976097-16976128)
chr1 (384-415)||(19897653-19897684)
chr1 (382-413)||(23920970-23921001)
chr1 (384-415)||(24636068-24636099)
chr1 (384-415)||(43452684-43452715)
chr1 (379-418)||(45849318-45849357)
chr1 (378-417)||(47693876-47693915)
chr1 (384-415)||(48762224-48762255)
chr1 (384-415)||(49936830-49936861)
chr1 (380-410)||(11918590-11918620)
chr1 (385-415)||(18056791-18056821)
chr1 (388-418)||(18928783-18928813)
chr1 (385-415)||(22348046-22348076)
chr1 (385-418)||(1395166-1395199)
chr1 (381-418)||(14390053-14390090)
chr1 (382-415)||(18057821-18057854)
chr1 (382-415)||(21641593-21641626)
chr1 (382-415)||(24368624-24368657)
chr1 (381-418)||(33157189-33157226)
chr1 (386-419)||(46590767-46590800)
chr1 (382-414)||(23319014-23319046)
chr1 (387-415)||(41033274-41033302)
[»] scaffold0516 (1 HSPs)
scaffold0516 (381-418)||(1257-1294)
[»] scaffold0249 (2 HSPs)
scaffold0249 (381-418)||(23542-23579)
scaffold0249 (378-418)||(23744-23784)
[»] scaffold0031 (1 HSPs)
scaffold0031 (377-418)||(80876-80917)
[»] scaffold0126 (1 HSPs)
scaffold0126 (377-417)||(37627-37667)
[»] scaffold1450 (1 HSPs)
scaffold1450 (381-413)||(748-780)
[»] scaffold0009 (2 HSPs)
scaffold0009 (386-418)||(51908-51940)
scaffold0009 (382-415)||(202911-202944)
[»] scaffold0004 (1 HSPs)
scaffold0004 (378-418)||(95994-96034)
[»] scaffold0571 (1 HSPs)
scaffold0571 (384-415)||(546-577)
[»] scaffold0074 (1 HSPs)
scaffold0074 (384-415)||(24416-24447)
[»] scaffold0338 (1 HSPs)
scaffold0338 (385-415)||(6525-6555)
[»] scaffold0238 (1 HSPs)
scaffold0238 (385-415)||(25260-25290)
[»] scaffold0194 (1 HSPs)
scaffold0194 (382-415)||(28687-28720)
[»] scaffold0189 (1 HSPs)
scaffold0189 (385-414)||(11219-11248)
[»] scaffold0117 (2 HSPs)
scaffold0117 (378-415)||(17852-17889)
scaffold0117 (381-409)||(17957-17985)
[»] scaffold0019 (2 HSPs)
scaffold0019 (381-414)||(72715-72748)
scaffold0019 (387-415)||(164070-164098)


Alignment Details
Target: chr7 (Bit Score: 176; Significance: 1e-94; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 146 - 373
Target Start/End: Complemental strand, 31941070 - 31940836
Alignment:
Q  146 gcatattttgcattctaaagcatgtgtggaaggcttattaaaaacaaaagcatatgtggaagataaaattaaaccaaaatttaataattttgaaaagaca 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31941070 gcatattttgcattctaaagcatgtgtggaaggcttattaaaaacaaaagcatatgtggaagataaaattaaaccaaaatttaataattttgaaaagaca 31940971  T
Q  246 tcacctttgaatttgtgttaagagaaaatggccg---gcaaaactgacatgtatacctttgataaatgatgt----tgtctattatatggatcacatata 338  Q
    ||||||||||||| |||||||||||||||||  |   ||||||||||| |||||||||||||||||||||||    |||||||||||| ||||||||| |    
T  31940970 tcacctttgaattcgtgttaagagaaaatggttgacagcaaaactgacgtgtatacctttgataaatgatgtatgttgtctattatattgatcacataca 31940871  T
Q  339 tcatttataaaatgaatcttaaaaatgaactttat 373  Q
    |||||||||||||||| ||||||||||||||||||    
T  31940870 tcatttataaaatgaaccttaaaaatgaactttat 31940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 26945763 - 26945723
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26945763 gggtgcggttatggtgcataaggaaatccttatgcaccctg 26945723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 44426593 - 44426633
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44426593 gggtgcggttatggtgcataaggaaatccttatgcaccctg 44426633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 46004584 - 46004544
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46004584 gggtgcggttatggtgcataaggaaatccttatgcaccctg 46004544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 38837778 - 38837741
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38837778 gggtgcggttatggtgcataaggaaatccttatgcacc 38837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 7845146 - 7845106
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  7845146 gggtgcggttatggtgcataaggaaatccttatgcaacctg 7845106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 41066018 - 41065978
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41066018 gggtgcggttatggtgcataaggaaatccttatgtaccctg 41065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 43742244 - 43742284
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  43742244 gggtgcggttatggtgcataaggaaatccttatgcatcctg 43742284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 413
Target Start/End: Original strand, 31365266 - 31365301
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgca 413  Q
    ||||||||||||||||||||||||||||||||||||    
T  31365266 gggtgcggttatggtgcataaggaaatccttatgca 31365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 34227923 - 34227885
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  34227923 gtgcggttatggtgcataaggaaattcttatgcaccctg 34227885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 11732041 - 11732074
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  11732041 gcggttatggtgcataaggaaatccttatgcacc 11732074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 15973859 - 15973892
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  15973859 gcggttatggtgcataaggaaatccttatgcacc 15973892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 26945512 - 26945549
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26945512 tgcggttatggtgcataaggaaattcttatgcaccctg 26945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 46572573 - 46572606
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  46572573 gcggttatggtgcataaggaaatccttatgcacc 46572606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 6620614 - 6620650
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6620614 gggtgcggttatggtgcataacgaaatccttatgcac 6620650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 34227675 - 34227711
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||| ||||    
T  34227675 gcggttatggtgcataaggaaatccttatgcaacctg 34227711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 44426844 - 44426808
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44426844 gcggttatggtgcataaggaaatctttatgcaccctg 44426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 48692094 - 48692062
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||    
T  48692094 cggttatggtgcataaggaaatccttatgcacc 48692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 16933136 - 16933167
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  16933136 ggttatggtgcataaggaaatccttatgcacc 16933167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 16938519 - 16938550
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  16938519 ggttatggtgcataaggaaatccttatgcacc 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 30884115 - 30884146
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  30884115 ggttatggtgcataaggaaatccttatgcacc 30884146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 31660242 - 31660211
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  31660242 ggttatggtgcataaggaaatccttatgcacc 31660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 33798776 - 33798745
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  33798776 ggttatggtgcataaggaaatccttatgcacc 33798745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 35737121 - 35737090
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  35737121 ggttatggtgcataaggaaatccttatgcacc 35737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 41911005 - 41911036
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  41911005 ggttatggtgcataaggaaatccttatgcacc 41911036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 46358693 - 46358662
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  46358693 ggttatggtgcataaggaaatccttatgcacc 46358662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 47340320 - 47340289
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  47340320 ggttatggtgcataaggaaatccttatgcacc 47340289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 48830642 - 48830611
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  48830642 ggttatggtgcataaggaaatccttatgcacc 48830611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Complemental strand, 763870 - 763840
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||    
T  763870 ggttatggtgcataaggaaatccttatgcac 763840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 411
Target Start/End: Complemental strand, 6620847 - 6620813
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatg 411  Q
    |||| ||||||||||||||||||||||||||||||    
T  6620847 tgggcgcggttatggtgcataaggaaatccttatg 6620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 15974994 - 15974964
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  15974994 gttatggtgcataaggaaatccttatgcacc 15974964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 30428880 - 30428910
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  30428880 gttatggtgcataaggaaatccttatgcacc 30428910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 5728620 - 5728657
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  5728620 gggtgcggttatagtgcatgaggaaatccttatgcacc 5728657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 5728926 - 5728889
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  5728926 tgcggttatggtgcataagaaaattcttatgcaccctg 5728889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 5758361 - 5758324
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgca 413  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  5758361 atgggtgcggttatcatgcataaggaaatccttatgca 5758324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 32685843 - 32685876
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||| ||||    
T  32685843 gcggttatggtgcataaggaaatccttatacacc 32685876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 38837538 - 38837575
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  38837538 tgcgtttatggtgcatacggaaatccttatgcaccctg 38837575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 7843768 - 7843728
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||| |||| |||||||||||||| ||||    
T  7843768 gggtgcggttatggtgtataaagaaatccttatgcaacctg 7843728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 418
Target Start/End: Original strand, 21995663 - 21995705
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21995663 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 21995705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 17109967 - 17109927
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17109967 gggtgcggttatggtgcataaggaaatccttatgcaccctg 17109927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 31763161 - 31763117
Alignment:
Q  374 ctatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  31763161 ctatgagtgcggttatggtgcataaggaaatccttatgcaccctg 31763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 36924236 - 36924276
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36924236 gggtgcggttatggtgcataaggaaatccttatgcaccctg 36924276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 419
Target Start/End: Original strand, 33883287 - 33883330
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctgt 419  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  33883287 atggctgcggttatggtgcataaggaaatccttatgcaccctgt 33883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 1492669 - 1492707
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1492669 gtgcggttatggtgcataaggaaatccttatgcaccctg 1492707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 418
Target Start/End: Original strand, 6841814 - 6841856
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  6841814 atggctgcggttatggtgcataaggaaatccttatgcaccctg 6841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 9813200 - 9813154
Alignment:
Q  372 atctatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  9813200 atctaagggtgcggttatggtgcataaggaaatctttatgcaccctg 9813154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 8157339 - 8157298
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  8157339 tgggtgcagttatggtgcataaggaaatccttatgcaccctg 8157298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 8165760 - 8165797
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8165760 tgcggttatggtgcataaggaaatccttatgcaccctg 8165797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 53865293 - 53865252
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  53865293 tgggcgcggttatggtgcataaggaaatccttatgcaccctg 53865252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 54895633 - 54895592
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  54895633 tgggtgtggttatggtgcataaggaaatccttatgcaccctg 54895592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 562770 - 562810
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  562770 gggtgcggttatggtgcataaggaaatccctatgcaccctg 562810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 2124343 - 2124379
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  2124343 gcggttatggtgcataaggaaatccttatgcaccctg 2124379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 12722735 - 12722771
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||||||||||||||||||||||||||||||    
T  12722735 tgcggttatggtgcataaggaaatccttatgcaccct 12722771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 12722987 - 12722947
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  12722987 gggtgcggttatggtgcataaggaaattcttatgcaccctg 12722947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 25715776 - 25715736
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  25715776 gggtgcggttatggtgcataagaaaatccttatgcaccctg 25715736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 33819690 - 33819726
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  33819690 gcggttatggtgcataaggaaatccttatgcaccctg 33819726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 33871327 - 33871287
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  33871327 gggtgcggttatgatgcataaggaaatccttatgcaccctg 33871287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 43374442 - 43374482
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  43374442 gggtgcggttatggtgcataaggaaatccttatgtaccctg 43374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 54895399 - 54895439
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  54895399 gggtgcggttatggtgcataagaaaatccttatgcaccctg 54895439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 2124593 - 2124554
Alignment:
Q  379 ggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  2124593 ggtgcggttatggtgcataaggaaattcttatgcaccctg 2124554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 10473698 - 10473660
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  10473698 tgggagcggttatggtgcataaggaaatccttatgcacc 10473660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 415
Target Start/End: Original strand, 22180200 - 22180238
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  22180200 tgggagcggttatggtgcataaggaaatccttatgcacc 22180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 25715644 - 25715678
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||    
T  25715644 ggttatggtgcataaggaaatccttatgcaccctg 25715678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 415
Target Start/End: Original strand, 30779341 - 30779375
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||||    
T  30779341 tgcggttatggtgcataaggaaatccttatgcacc 30779375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 36309413 - 36309451
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  36309413 gtgcgattatggtgcataaggaaatccttatgcaccctg 36309451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 26577260 - 26577293
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  26577260 gcggttatggtgcataaggaaatccttatgcacc 26577293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 37059710 - 37059743
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  37059710 gcggttatggtgcataaggaaatccttatgcacc 37059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 43375567 - 43375530
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43375567 tgcggttatggtgcatacggaaatccttatgcaccctg 43375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 45256940 - 45256907
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  45256940 gcggttatggtgcataaggaaatccttatgcacc 45256907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 31762928 - 31762964
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||| ||||    
T  31762928 gcggttatggtgcataaggaaatccttatgcatcctg 31762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 36309662 - 36309626
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36309662 gcggttatggtgcataagaaaatccttatgcaccctg 36309626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 38010759 - 38010719
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  38010759 gggttcggttatggtgcatacggaaatccttatgcaccctg 38010719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 11786147 - 11786116
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  11786147 ggttatggtgcataaggaaatccttatgcacc 11786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 11798314 - 11798283
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  11798314 ggttatggtgcataaggaaatccttatgcacc 11798283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 13635618 - 13635649
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  13635618 ggttatggtgcataaggaaatccttatgcacc 13635649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 15051029 - 15051060
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  15051029 ggttatggtgcataaggaaatccttatgcacc 15051060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 30358880 - 30358849
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  30358880 ggttatggtgcataaggaaatccttatgcacc 30358849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 30597872 - 30597841
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  30597872 ggttatggtgcataaggaaatccttatgcacc 30597841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 33883531 - 33883492
Alignment:
Q  379 ggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  33883531 ggtgcagttatggtgcataaggaaatcattatgcaccctg 33883492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 49425950 - 49425981
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  49425950 ggttatggtgcataaggaaatccttatgcacc 49425981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 50644713 - 50644682
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  50644713 ggttatggtgcataaggaaatccttatgcacc 50644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 418
Target Start/End: Original strand, 51076901 - 51076932
Alignment:
Q  387 tatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||    
T  51076901 tatggtgcataaggaaatccttatgcaccctg 51076932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 53441493 - 53441462
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  53441493 ggttatggtgcataaggaaatccttatgcacc 53441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 16475067 - 16475029
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  16475067 gtgcggttatggtgcataaggaaatctttatgcatcctg 16475029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 411
Target Start/End: Original strand, 17109717 - 17109747
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatg 411  Q
    |||||||||||||||||||||||||||||||    
T  17109717 tgcggttatggtgcataaggaaatccttatg 17109747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 22181303 - 22181273
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  22181303 gttatggtgcataaggaaatccttatgcacc 22181273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 27764247 - 27764277
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  27764247 gttatggtgcataaggaaatccttatgcacc 27764277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 36621759 - 36621729
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  36621759 gttatggtgcataaggaaatccttatgcacc 36621729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 45255982 - 45256012
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  45255982 gttatggtgcataaggaaatccttatgcacc 45256012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 49492406 - 49492436
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  49492406 gttatggtgcataaggaaatccttatgcacc 49492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 50643750 - 50643780
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  50643750 gttatggtgcataaggaaatccttatgcacc 50643780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Complemental strand, 639035 - 639006
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcacc 639006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 21098177 - 21098144
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||| |||||||||||||||||||||    
T  21098177 gcggttatggtgtataaggaaatccttatgcacc 21098144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 41025055 - 41025096
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||| ||||| |||||||||||||||||||    
T  41025055 tgggcgcggttatggtacataatgaaatccttatgcaccctg 41025096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 47567891 - 47567928
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  47567891 gggtgcggttatggtgaataagaaaatccttatgcacc 47567928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 48076907 - 48076944
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  48076907 gggtgcggttatcatgcataaggaaatccttatgcacc 48076944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 53526498 - 53526461
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  53526498 tgcggttatggtgcataaggaaattcttatgtaccctg 53526461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 414
Target Start/End: Complemental strand, 4169473 - 4169441
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||| |||||||||    
T  4169473 gcggttatggtgcataaggaaattcttatgcac 4169441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 10374038 - 10374078
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  10374038 gggtgcgtttatggtgtataaggaaatctttatgcaccctg 10374078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 37059964 - 37059924
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  37059964 gggtgcgattatggtacataagaaaatccttatgcaccctg 37059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 38564010 - 38563970
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||  ||||||||||||| ||||    
T  38564010 gggtgcggttatggtgcataaaaaaatccttatgcatcctg 38563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 53865059 - 53865095
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  53865059 gggtgcggttatgatgcataaggaaatctttatgcac 53865095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 36185956 - 36185914
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36185956 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 36185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 50416614 - 50416573
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  50416614 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 50416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 418
Target Start/End: Original strand, 12974004 - 12974047
Alignment:
Q  375 tatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  12974004 tatgggcgcggttatggtgcataaggaaatccttatgcaccctg 12974047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 8036798 - 8036835
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8036798 tgcggttatggtgcataaggaaatccttatgcaccctg 8036835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 12974239 - 12974202
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12974239 gggtgcggttatggtgcataaggaaatccttatgcacc 12974202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 27068527 - 27068564
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27068527 gggtgcggttatggtgcataaggaaatccttatgcacc 27068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 50416478 - 50416515
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50416478 tgcggttatggtgcataaggaaatccttatgcaccctg 50416515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 8037038 - 8036998
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  8037038 gggtgcggttatggtgcatgaggaaatccttatgcaccctg 8036998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 417
Target Start/End: Complemental strand, 47729305 - 47729266
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  47729305 gggtgcggttttggtgcataaggaaatccttatgcaccct 47729266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 27446263 - 27446225
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  27446263 tgggtgcagttatggtgcataaggaaatccttatgcacc 27446225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 49053477 - 49053435
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  49053477 atgggtgcggttatggtgcataaggaaatctttatccaccctg 49053435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 415
Target Start/End: Original strand, 51361517 - 51361555
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  51361517 tgggagcggttatggtgcataaggaaatccttatgcacc 51361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 8719182 - 8719149
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  8719182 gcggttatggtgcataaggaaatccttatgcacc 8719149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 9071069 - 9071036
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  9071069 gcggttatggtgcataaggaaatccttatgcacc 9071036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 16653492 - 16653529
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16653492 gggtgcggttatggtgcataaggaaattcttatgcacc 16653529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 19012387 - 19012424
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19012387 gggtgcggttatggtgcataaggaaattcttatgcacc 19012424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 19012608 - 19012571
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19012608 tgcggttatggtgcataaggaaattcttatgcaccctg 19012571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 47924408 - 47924375
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctg 47924375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 36185725 - 36185761
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36185725 gcggttatggtgcataaggaaatccttatgcatcctg 36185761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 3475300 - 3475331
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  3475300 ggttatggtgcataaggaaatccttatgcacc 3475331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 6097577 - 6097608
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  6097577 ggttatggtgcataaggaaatccttatgcacc 6097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 9106440 - 9106409
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  9106440 ggttatggtgcataaggaaatccttatgcacc 9106409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 9595873 - 9595904
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  9595873 ggttatggtgcataaggaaatccttatgcacc 9595904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 10986525 - 10986494
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  10986525 ggttatggtgcataaggaaatccttatgcacc 10986494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 16276662 - 16276701
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  16276662 atgggagcggttatggtgcataaagaaatccttatgcacc 16276701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 17620737 - 17620768
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  17620737 ggttatggtgcataaggaaatccttatgcacc 17620768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 19284844 - 19284813
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  19284844 ggttatggtgcataaggaaatccttatgcacc 19284813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 407
Target Start/End: Original strand, 30794825 - 30794856
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatcct 407  Q
    ||||||||||||||||||||||||||||||||    
T  30794825 atgggtgcggttatggtgcataaggaaatcct 30794856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 30947804 - 30947835
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  30947804 ggttatggtgcataaggaaatccttatgcacc 30947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 34562400 - 34562431
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  34562400 ggttatggtgcataaggaaatccttatgcacc 34562431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 54379335 - 54379304
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  54379335 ggttatggtgcataaggaaatccttatgcacc 54379304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 8718108 - 8718138
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  8718108 gttatggtgcataaggaaatccttatgcacc 8718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 9069995 - 9070025
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  9069995 gttatggtgcataaggaaatccttatgcacc 9070025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 19385373 - 19385343
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  19385373 gttatggtgcataaggaaatccttatgcacc 19385343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Original strand, 26662431 - 26662461
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||    
T  26662431 ggttatggtgcataaggaaatccttatgcac 26662461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 38345277 - 38345315
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  38345277 gtgcggttatggtgcataaagaaatctttatgcaccctg 38345315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 50755234 - 50755204
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  50755234 gttatggtgcataaggaaatccttatgcacc 50755204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 51362496 - 51362466
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  51362496 gttatggtgcataaggaaatccttatgcacc 51362466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 2941821 - 2941850
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcacc 2941850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 19384380 - 19384413
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||| ||||||||||    
T  19384380 gcggttatggtgcataaggaaattcttatgcacc 19384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 23756346 - 23756309
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  23756346 gggtgcggttatcatgcataaggaaatccttatgcacc 23756309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 33854842 - 33854801
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctgt 419  Q
    |||||||||||||||| |||||||||| |||||| |||||||    
T  33854842 gggtgcggttatggtgtataaggaaattcttatgtaccctgt 33854801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 47225758 - 47225795
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  47225758 tgcggttatggtgcataaacaaatccttatgcaccctg 47225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 47225890 - 47225857
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| ||||||    
T  47225890 gttatggtgcataaggaaatccttatgtaccctg 47225857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 20127222 - 20127182
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||| |||| |||||||| ||||||||||||||||||    
T  20127222 gggtgcggctatgatgcataagaaaatccttatgcaccctg 20127182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 21175309 - 21175277
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||| |||||||||||||||||||||    
T  21175309 ttatggtgcatgaggaaatccttatgcaccctg 21175277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 418
Target Start/End: Original strand, 31783786 - 31783828
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31783786 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 31783828  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 24183646 - 24183606
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24183646 gggtgcggttatggtgcataaggaaatccttatgcaccctg 24183606  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 22596556 - 22596513
Alignment:
Q  375 tatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  22596556 tatgggtgcggttatggtgcataaggaaatccttatgtaccctg 22596513  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 418
Target Start/End: Original strand, 31711503 - 31711545
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  31711503 atgggtgcggttatggtgcataaggaaatccttatgtaccctg 31711545  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 34726847 - 34726805
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  34726847 atgggtgcggttatggtgcataaggaaattcttatgcaccctg 34726805  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 20661394 - 20661431
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20661394 tgcggttatggtgcataaggaaatccttatgcaccctg 20661431  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 37867148 - 37867189
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  37867148 tgggtgcggttatggtgcataaggaaatccttatccaccctg 37867189  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 19246657 - 19246697
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  19246657 gggtgcagttatggtgcataaggaaatccttatgcaccctg 19246697  T

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Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 42364487 - 42364527
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  42364487 gggtgcggttatggtgcataagaaaatccttatgcaccctg 42364527  T

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Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 44915540 - 44915500
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  44915540 gggtgcggttatggtgcataaggaaatgcttatgcaccctg 44915500  T

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Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 417
Target Start/End: Complemental strand, 20194076 - 20194037
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  20194076 gggtgcggttatggtgcataaggaaattcttatgcaccct 20194037  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 31784031 - 31783997
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||||    
T  31784031 tgcggttatggtgcataaggaaatccttatgcacc 31783997  T

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Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 34726605 - 34726639
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||    
T  34726605 ggttatggtgcataaggaaatccttatgcaccctg 34726639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 12449052 - 12449085
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||||||    
T  12449052 tgcggttatggtgcataaggaaatccttatgcac 12449085  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 12449292 - 12449255
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12449292 gggtgcggttatggtgcataaggaaatctttatgcacc 12449255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 22596302 - 22596339
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  22596302 tgcggttatggtgtataaggaaatccttatgcaccctg 22596339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 25575321 - 25575358
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25575321 tgcggttatggtgcataaggaaatccttatgcatcctg 25575358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 15253069 - 15253029
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  15253069 gggtgcggttatggtgtataacgaaatccttatgcaccctg 15253029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 16111750 - 16111714
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16111750 gcggttatggtgcataaggaaatctttatgcaccctg 16111714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 20661644 - 20661604
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  20661644 gggtacggttatggtgcataaggaaatcattatgcaccctg 20661604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 23182274 - 23182234
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  23182274 gggtgcggttatggtgaataaggaaattcttatgcaccctg 23182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 23593531 - 23593491
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  23593531 gggtgcggttatggtgaataaggaaattcttatgcaccctg 23593491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 37867400 - 37867364
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37867400 gcggttacggtgcataaggaaatccttatgcaccctg 37867364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 42364738 - 42364702
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42364738 gcggttatggtgcaaaaggaaatccttatgcaccctg 42364702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 1292072 - 1292103
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  1292072 ggttatggtgcataaggaaatccttatgcacc 1292103  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 7487147 - 7487178
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  7487147 ggttatggtgcataaggaaatccttatgcacc 7487178  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 39355208 - 39355177
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  39355208 ggttatggtgcataaggaaatccttatgcacc 39355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 41345088 - 41345119
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  41345088 ggttatggtgcataaggaaatccttatgcacc 41345119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 18298169 - 18298139
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  18298169 gttatggtgcataaggaaatccttatgcacc 18298139  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 25192899 - 25192929
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  25192899 gttatggtgcataaggaaatccttatgcacc 25192929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 15150337 - 15150300
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  15150337 tgcggttatggtgcataagaaaatccttatgcatcctg 15150300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 18297167 - 18297200
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||| |||||||||||||||||    
T  18297167 gcggttatggtgcatagggaaatccttatgcacc 18297200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 22588316 - 22588353
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||  |||||||||||||||    
T  22588316 tgcggttatggtgcataaggatttccttatgcaccctg 22588353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 44915289 - 44915326
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  44915289 tgcggttatggtgcataaggaaatctttatgcagcctg 44915326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 25194035 - 25194003
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||| ||||||||||||||||    
T  25194035 cggttatggtgcataatgaaatccttatgcacc 25194003  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 30777294 - 30777330
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||  ||||||||||||||||||    
T  30777294 gcggttatggtgcataaaaaaatccttatgcaccctg 30777330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 43823923 - 43823887
Alignment:
Q  379 ggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||  ||||||||||||||||||||||||    
T  43823923 ggtgcggttatcatgcataaggaaatccttatgcacc 43823887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 10589003 - 10588962
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10589003 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 10588962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 19284366 - 19284406
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19284366 gggtgcggttatggtgcataaggaaatccttatgcaccctg 19284406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 21385038 - 21384998
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21385038 gggtgcggttatggtgcataaggaaatccttatgcaccctg 21384998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 22857486 - 22857523
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22857486 tgcggttatggtgcataaggaaatccttatgcaccctg 22857523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 25119520 - 25119479
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  25119520 tgggtgcggttatggtgcataaggaaatccttatgcagcctg 25119479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 22857726 - 22857686
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  22857726 gggtgcggttatggtgcataagaaaatccttatgcaccctg 22857686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 10698571 - 10698612
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  10698571 tgggcgcggttatggtgcataaggaaatccttgtgcaccctg 10698612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 14237779 - 14237812
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||||||||||||||    
T  14237779 ggttatggtgcataaggaaatccttatgcaccct 14237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 20522891 - 20522858
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||||||||||||||    
T  20522891 ggttatggtgcataaggaaatccttatgcaccct 20522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 25119104 - 25119141
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25119104 tgcggttatggtgcataaggaaattcttatgcaccctg 25119141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 26713224 - 26713184
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  26713224 atgggtgcggttatggtgcataa-gaaatccttatgcaccct 26713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 7371147 - 7371107
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  7371147 gggtgcggttatggtgcataagaaaatctttatgcaccctg 7371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 19281282 - 19281318
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| |||||||||    
T  19281282 gcggttatggtgcataaggaaatccttgtgcaccctg 19281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 6900976 - 6900945
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  6900976 ggttatggtgcataaggaaatccttatgcacc 6900945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 7765447 - 7765416
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  7765447 ggttatggtgcataaggaaatccttatgcacc 7765416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 15493347 - 15493316
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  15493347 ggttatggtgcataaggaaatccttatgcacc 15493316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 34869956 - 34869987
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  34869956 ggttatggtgcataaggaaatccttatgcacc 34869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 12394438 - 12394408
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  12394438 gttatggtgcataaggaaatccttatgcacc 12394408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 15035033 - 15035003
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  15035033 gttatggtgcataaggaaatccttatgcacc 15035003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 18612412 - 18612374
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  18612412 tgggtgcggttatcatgcataaggaaatccttatgcacc 18612374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Original strand, 18755664 - 18755694
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||    
T  18755664 ggttatggtgcataaggaaatccttatgcac 18755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 33346429 - 33346399
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  33346429 gttatggtgcataaggaaatccttatgcacc 33346399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 34399648 - 34399678
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  34399648 gttatggtgcataaggaaatccttatgcacc 34399678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 411
Target Start/End: Complemental strand, 878435 - 878406
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatg 411  Q
    ||||||||||||||||||||||||||||||    
T  878435 gcggttatggtgcataaggaaatccttatg 878406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Complemental strand, 11140504 - 11140467
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  11140504 gggtgcggttttggtgtataaggaaatccttatgcacc 11140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 21384787 - 21384824
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  21384787 tgcggttatggtgcataaggaaattcttatgcatcctg 21384824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 3340584 - 3340625
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3340584 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 3340625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 39861829 - 39861789
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39861829 gggtgcggttatggtgcataaggaaatccttatgcaccctg 39861789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 15559039 - 15559081
Alignment:
Q  373 tctatgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  15559039 tctaagggtgcggttatggtgcataaggaaatccttatgcacc 15559081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 11661032 - 11660991
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  11661032 tgggttcggttatggtgcataaggaaatccttatgcaccctg 11660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 20696377 - 20696336
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  20696377 tgggtgcggttatggtgcataaggaaatccttattcaccctg 20696336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Original strand, 39086511 - 39086552
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  39086511 tgggtgcggttatggtgcataagaaaatccttatgcaccctg 39086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 11660791 - 11660827
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||||||||||||||||||||||||||||||    
T  11660791 tgcggttatggtgcataaggaaatccttatgcaccct 11660827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 16552242 - 16552282
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  16552242 gggtgcggttatggtgcataaggaaatccgtatgcaccctg 16552282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 20134448 - 20134412
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||||||||    
T  20134448 gggtgcggttatggtgcataaggaaatccttatgcac 20134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 23155520 - 23155560
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  23155520 gggtgtggttatggtgcataaggaaatccttatgcaccctg 23155560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 39166389 - 39166349
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  39166389 gggtgcggttatggtgcataagaaaatccttatgcaccctg 39166349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 417
Target Start/End: Complemental strand, 5411805 - 5411766
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5411805 gggtgcggttatggtgcataaggaaattcttatgcaccct 5411766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 417
Target Start/End: Original strand, 35662066 - 35662101
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||||||||||||||||||||||||||    
T  35662066 gcggttatggtgcataaggaaatccttatgcaccct 35662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 22695586 - 22695552
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||||    
T  22695586 tgcggttatggtgcataaggaaatccttatgcacc 22695552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 25545618 - 25545584
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||||    
T  25545618 tgcggttatggtgcataaggaaatccttatgcacc 25545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 20134197 - 20134234
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20134197 tgcggttatggtgcataaggaaatccttatgcagcctg 20134234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 22672051 - 22672006
Alignment:
Q  373 tctatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||    
T  22672051 tctacgggtacggttatggtgcataaggaaatccttatgcatcctg 22672006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 36864061 - 36864098
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36864061 tgggtgcggttatggtgcataaggaaattcttatgcac 36864098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 7286748 - 7286788
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  7286748 gggtgcggttatggtgtataaggaaatctttatgcaccctg 7286788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 35662278 - 35662242
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||| |||||||||||||    
T  35662278 gcggttatggtgcataaggaaatacttatgcaccctg 35662242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 3883928 - 3883959
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  3883928 ggttatggtgcataaggaaatccttatgcacc 3883959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 13553156 - 13553125
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  13553156 ggttatggtgcataaggaaatccttatgcacc 13553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 14394641 - 14394610
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  14394641 ggttatggtgcataaggaaatccttatgcacc 14394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 14940249 - 14940280
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  14940249 ggttatggtgcataaggaaatccttatgcacc 14940280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 25545570 - 25545609
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  25545570 atgggtgcggttatggtgcataaggatttccttatgcacc 25545609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 26637730 - 26637761
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  26637730 ggttatggtgcataaggaaatccttatgcacc 26637761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 37456853 - 37456822
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  37456853 ggttatggtgcataaggaaatccttatgcacc 37456822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 39861579 - 39861614
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39861579 cggttatggggcataaggaaatccttatgcaccctg 39861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Original strand, 42746516 - 42746547
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttatg 411  Q
    ||||||||||||||||||||||||||||||||    
T  42746516 gtgcggttatggtgcataaggaaatccttatg 42746547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 13362777 - 13362807
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  13362777 gttatggtgcataaggaaatccttatgcacc 13362807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 15059680 - 15059642
Alignment:
Q  381 tgcggttatggtgcataaggaaat-ccttatgcaccctg 418  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  15059680 tgcggttatggtgcataaggaaatcccttatgcaccctg 15059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 25017275 - 25017245
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  25017275 gttatggtgcataaggaaatccttatgcacc 25017245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 28070211 - 28070181
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  28070211 gttatggtgcataaggaaatccttatgcacc 28070181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 703732 - 703765
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||| ||||    
T  703732 gttatggtgcataaggaaatccttatgcatcctg 703765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 3340825 - 3340792
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||| |||||||||||||||||||    
T  3340825 tgcggttatggtgcgtaaggaaatccttatgcac 3340792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 13363839 - 13363806
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||| |||||||||||||||||||    
T  13363839 gcggttatggtgcacaaggaaatccttatgcacc 13363806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 414
Target Start/End: Complemental strand, 22830830 - 22830801
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||    
T  22830830 gttatggtgcataaggaaatccttatgcac 22830801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 28069246 - 28069279
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||| |||||||||||||||||||||    
T  28069246 gcggttatggtgtataaggaaatccttatgcacc 28069279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 414
Target Start/End: Complemental strand, 39086748 - 39086719
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||    
T  39086748 gttatggtgcataaggaaatccttatgcac 39086719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 5630312 - 5630280
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||| |||||||||||||||||||||    
T  5630312 ttatggtgcatgaggaaatccttatgcaccctg 5630280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 7286998 - 7286963
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7286998 gcggttatggtgcataagg-aatccttatgcaccctg 7286963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 414
Target Start/End: Complemental strand, 36864313 - 36864281
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||| ||||||||||||||||||||    
T  36864313 gcggttatggtgtataaggaaatccttatgcac 36864281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 20169 - 20129
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20169 gggtgcggttatggtgcataaggaaatccttatgcaccctg 20129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 33611 - 33651
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33611 gggtgcggttatggtgcataaggaaatccttatgcaccctg 33651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 33862 - 33828
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||| ||||||||||    
T  33862 tgcggttatggtgcataaggaaattcttatgcacc 33828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 15950 - 15914
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  15950 gggtgcggttatggtacataaggaaattcttatgcac 15914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 17792941 - 17792901
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17792941 gggtgcggttatggtgcataaggaaatccttatgcaccctg 17792901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 23567480 - 23567517
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23567480 tgggtgcggttatggtgcataaggaaatccttatgcac 23567517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 24473293 - 24473252
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctgt 419  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  24473293 gggtacggttatggtgcataaggaaatccttatgcaccctgt 24473252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 35448656 - 35448619
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35448656 tgcggttatggtgcataaggaaatccttatgcaccctg 35448619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 10586110 - 10586070
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  10586110 gggtgcggttatgatgcataaggaaatccttatgcaccctg 10586070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 15808880 - 15808920
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15808880 gggtgcggttatggtgcataagaaaatccttatgcaccctg 15808920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 15809886 - 15809850
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||||||||||||||||||||||||||||||    
T  15809886 tgcggttatggtgcataaggaaatccttatgcaccct 15809850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 17656613 - 17656649
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||||||||    
T  17656613 gggtgcggttatggtgcataaggaaatccttatgcac 17656649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 18161283 - 18161322
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  18161283 gggtgcagttatggtgcataaggaaatccttatgcaccct 18161322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 34343244 - 34343283
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  34343244 gggtgcggttatggtgcataaggaaatctttatgcaccct 34343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 186127 - 186089
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctgt 419  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  186127 tgcggttatggtgtataaggaaatccttatgcaccctgt 186089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 1672973 - 1672940
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcaccctg 1672940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 4835517 - 4835550
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||||    
T  4835517 gcggttatggtgcataaggaaatccttatgcacc 4835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 8439239 - 8439202
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgca 413  Q
    |||||||||||||||||||||||||||||| |||||||    
T  8439239 atgggtgcggttatggtgcataaggaaatctttatgca 8439202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 27506708 - 27506741
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctg 27506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 185876 - 185912
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||| |||||||||||||||||||||||||||||||    
T  185876 gggtgtggttatggtgcataaggaaatccttatgcac 185912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 18757373 - 18757337
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18757373 gcggttatggtgcataaagaaatccttatgcaccctg 18757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 39657708 - 39657740
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||||    
T  39657708 cggttatggtgcataaggaaatccttatgcacc 39657740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 1149916 - 1149947
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  1149916 ggttatggtgcataaggaaatccttatgcacc 1149947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 10237527 - 10237496
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  10237527 ggttatggtgcataaggaaatccttatgcacc 10237496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 15227203 - 15227172
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  15227203 ggttatggtgcataaggaaatccttatgcacc 15227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 23397486 - 23397455
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  23397486 ggttatggtgcataaggaaatccttatgcacc 23397455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Complemental strand, 23567687 - 23567652
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||| |||||||||||||    
T  23567687 cggttatggtgcataaggaaattcttatgcaccctg 23567652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 34343503 - 34343460
Alignment:
Q  375 tatgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||    
T  34343503 tatggctgcggttatggtgcataaggaaattattatgcaccctg 34343460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 34633214 - 34633245
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  34633214 ggttatggtgcataaggaaatccttatgcacc 34633245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 34647172 - 34647203
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  34647172 ggttatggtgcataaggaaatccttatgcacc 34647203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 35301630 - 35301661
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  35301630 ggttatggtgcataaggaaatccttatgcacc 35301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 1208716 - 1208746
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  1208716 gttatggtgcataaggaaatccttatgcacc 1208746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 32987503 - 32987473
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  32987503 gttatggtgcataaggaaatccttatgcacc 32987473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 39021982 - 39022012
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  39021982 gttatggtgcataaggaaatccttatgcacc 39022012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Original strand, 40022389 - 40022419
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||    
T  40022389 ggttatggtgcataaggaaatccttatgcac 40022419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 42433708 - 42433738
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  42433708 gttatggtgcataaggaaatccttatgcacc 42433738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Complemental strand, 1209827 - 1209798
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcacc 1209798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 2751280 - 2751247
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||| |||||||||||||||    
T  2751280 gcggttatggtgcataagaaaatccttatgcacc 2751247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 369
Target Start/End: Original strand, 10210404 - 10210437
Alignment:
Q  336 atatcatttataaaatgaatcttaaaaatgaact 369  Q
    |||||||||||||||||||||| |||||||||||    
T  10210404 atatcatttataaaatgaatctaaaaaatgaact 10210437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 15259854 - 15259887
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||| |||||||||||||||||||||||    
T  15259854 gcggttatggggcataaggaaatccttatgcacc 15259887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 21120187 - 21120224
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  21120187 gggtgcgattatggtgcataatgaaatccttatgcacc 21120224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 23347767 - 23347730
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  23347767 tgcggttatggtgcataagaaaatccttatgaaccctg 23347730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 45409403 - 45409440
Alignment:
Q  381 tgcggttatggtgcataagg-aaatccttatgcaccct 417  Q
    |||||||||||||||||||| |||||||||||||||||    
T  45409403 tgcggttatggtgcataaggaaaatccttatgcaccct 45409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 7059209 - 7059177
Alignment:
Q  383 cggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||| |||||||||    
T  7059209 cggttatggtgcataaggaaatcattatgcacc 7059177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 32644046 - 32644081
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32644046 gcggttatggtgcataagg-aatccttatgcaccctg 32644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 41451288 - 41451248
Alignment:
Q  374 ctatgggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||| | |||||||||| ||||||||||||||||||||    
T  41451288 ctatgggagtggttatggtgtataaggaaatccttatgcac 41451248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 9041100 - 9041060
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9041100 gggtgcggttatggtgcataaggaaatccttatgcaccctg 9041060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 17893322 - 17893282
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17893322 gggtgcggttatggtgcataaggaaatccttatgcaccctg 17893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 33156987 - 33157027
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33156987 gggtgcggttatggtgcataaggaaatccttatgcaccctg 33157027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 418
Target Start/End: Original strand, 10974626 - 10974668
Alignment:
Q  376 atgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  10974626 atggctgcggttatggtgcataaggaaatccttatgcaccctg 10974668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 14229170 - 14229207
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14229170 tgcggttatggtgcataaggaaatccttatgcaccctg 14229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 419
Target Start/End: Complemental strand, 17811328 - 17811291
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctgt 419  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17811328 gcggttatggtgcataaggaaatccttatgcaccctgt 17811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 415
Target Start/End: Complemental strand, 1395403 - 1395363
Alignment:
Q  375 tatgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  1395403 tatggttgcggttatggtgcataaggaaatccttatgcacc 1395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 9628644 - 9628608
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  9628644 gcggttatggtgcataaggaaatccttatgcaccctg 9628608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 12070659 - 12070619
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  12070659 gggtgcggttatggtgcataaggaaattcttatgcaccctg 12070619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 31763770 - 31763810
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  31763770 gggtgcggttatggtgcataaggaaatccttatacaccctg 31763810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 31764019 - 31763983
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    |||||||||||||||||||||||||||||||||||||    
T  31764019 tgcggttatggtgcataaggaaatccttatgcaccct 31763983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 32595099 - 32595139
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  32595099 gggtgcggttatggtgcataaggaaattcttatgcaccctg 32595139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 42134178 - 42134142
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  42134178 gcggttatggtgcataaggaaatccttatgcaccctg 42134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 49992513 - 49992549
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||||||||    
T  49992513 gggtgcggttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 17893073 - 17893107
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||    
T  17893073 ggttatggtgcataaggaaatccttatgcaccctg 17893107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 23817494 - 23817452
Alignment:
Q  373 tctatgggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  23817494 tctatgggagtggttatggtgcataaggaaatccttatgcacc 23817452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 32595326 - 32595292
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||||    
T  32595326 ggttatggtgcataaggaaatccttatgcaccctg 32595292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 12796418 - 12796455
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  12796418 gggtgcggttatggtgcataaggaaatccttctgcacc 12796455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 14229407 - 14229370
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  14229407 tgcggttatggtgcataaggaaatctttatgcaccctg 14229370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 32143815 - 32143782
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||||||    
T  32143815 tgcggttatggtgcataaggaaatccttatgcac 32143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 42133942 - 42133979
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42133942 tgcggttatggtgcataaggaaatccttatgcatcctg 42133979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 11354560 - 11354524
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11354560 gggtgcggttatggtgcataagcaaatccttatgcac 11354524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 377 - 413
Target Start/End: Complemental strand, 11422620 - 11422584
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgca 413  Q
    |||| ||||||||||||||||||||||||||||||||    
T  11422620 tgggagcggttatggtgcataaggaaatccttatgca 11422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 14389839 - 14389879
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  14389839 gggtgcggttgtagtgcataaggaaatccttatgcaccctg 14389879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 18929000 - 18928964
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18929000 gcggttatggtgcataaggaaatctttatgcaccctg 18928964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 414
Target Start/End: Complemental strand, 29945461 - 29945429
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||||||||||||||||||    
T  29945461 gcggttatggtgcataaggaaatccttatgcac 29945429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 418
Target Start/End: Original strand, 45849111 - 45849143
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcaccctg 45849143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 6314289 - 6314258
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  6314289 ggttatggtgcataaggaaatccttatgcacc 6314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 16976128 - 16976097
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  16976128 ggttatggtgcataaggaaatccttatgcacc 16976097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 19897653 - 19897684
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  19897653 ggttatggtgcataaggaaatccttatgcacc 19897684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 413
Target Start/End: Original strand, 23920970 - 23921001
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgca 413  Q
    ||||||||||||||||||||||||||||||||    
T  23920970 gcggttatggtgcataaggaaatccttatgca 23921001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 24636099 - 24636068
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  24636099 ggttatggtgcataaggaaatccttatgcacc 24636068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 43452715 - 43452684
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  43452715 ggttatggtgcataaggaaatccttatgcacc 43452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 45849357 - 45849318
Alignment:
Q  379 ggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  45849357 ggtgcgattatggtgcataaggaaattcttatgcaccctg 45849318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Complemental strand, 47693915 - 47693876
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  47693915 gggtgcggttatgatgcataaggaaatctttatgcaccct 47693876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 48762224 - 48762255
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  48762224 ggttatggtgcataaggaaatccttatgcacc 48762255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 49936830 - 49936861
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  49936830 ggttatggtgcataaggaaatccttatgcacc 49936861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 410
Target Start/End: Original strand, 11918590 - 11918620
Alignment:
Q  380 gtgcggttatggtgcataaggaaatccttat 410  Q
    |||||||||||||||||||||||||||||||    
T  11918590 gtgcggttatggtgcataaggaaatccttat 11918620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 18056791 - 18056821
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  18056791 gttatggtgcataaggaaatccttatgcacc 18056821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 418
Target Start/End: Original strand, 18928783 - 18928813
Alignment:
Q  388 atggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||    
T  18928783 atggtgcataaggaaatccttatgcaccctg 18928813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 22348046 - 22348076
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  22348046 gttatggtgcataaggaaatccttatgcacc 22348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 1395166 - 1395199
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||| |||||||||    
T  1395166 gttatggtgcataaggaaatccttttgcaccctg 1395199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 14390090 - 14390053
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||  |||||||||||||||    
T  14390090 tgcggttatggtgcataaggatttccttatgcaccctg 14390053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 18057854 - 18057821
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||| |||||||||||||||||||||    
T  18057854 gcggttatggtgtataaggaaatccttatgcacc 18057821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 21641593 - 21641626
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||| ||||||||||||||||||||||||    
T  21641593 gcggttatgctgcataaggaaatccttatgcacc 21641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 24368657 - 24368624
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||| |||||||||||||||    
T  24368657 gcggttatggtgcataagaaaatccttatgcacc 24368624  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 33157226 - 33157189
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  33157226 tgcggttatggtggataaggaaatcattatgcaccctg 33157189  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 46590800 - 46590767
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcaccctgt 419  Q
    |||||||||||||||||||| |||||||||||||    
T  46590800 ttatggtgcataaggaaatctttatgcaccctgt 46590767  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 23319014 - 23319046
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||| ||||||||||||||||||||    
T  23319014 gcggttatggtggataaggaaatccttatgcac 23319046  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 415
Target Start/End: Complemental strand, 41033302 - 41033274
Alignment:
Q  387 tatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||    
T  41033302 tatggtgcataaggaaatccttatgcacc 41033274  T

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Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 1294 - 1257
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1294 tgcggttatggtgcataaggaaatccttatgcaccctg 1257  T

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Target: scaffold0249 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 23542 - 23579
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23542 tgcggttatggtgcataaggaaatccttatgcaccctg 23579  T

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Target: scaffold0249; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 23784 - 23744
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  23784 gggtgcgattatggtgcataaggaaatccttatgcaccctg 23744  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 80917 - 80876
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  80917 tgggtgcggttatggtgcataagaaaatccttatgcaccctg 80876  T

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Target: scaffold0126 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 37627 - 37667
Alignment:
Q  377 tgggtgcggttatggtgcataaggaaatccttatgcaccct 417  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  37627 tgggtgcggttattgtgcataaggaaatccttatgcaccct 37667  T

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Target: scaffold1450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 413
Target Start/End: Original strand, 748 - 780
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgca 413  Q
    |||||||||||||||||||||||||||||||||    
T  748 tgcggttatggtgcataaggaaatccttatgca 780  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 418
Target Start/End: Original strand, 51908 - 51940
Alignment:
Q  386 ttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||||||||||||||||||||||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcaccctg 51940  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 202911 - 202944
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||| |||||||||    
T  202911 gcggttatggtgcataaggaaatcattatgcacc 202944  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 95994 - 96034
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcaccctg 418  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  95994 gggtgcagttatggtgcataagaaaatccttatgcaccctg 96034  T

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Target: scaffold0571 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 546 - 577
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  546 ggttatggtgcataaggaaatccttatgcacc 577  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 24447 - 24416
Alignment:
Q  384 ggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||||||||    
T  24447 ggttatggtgcataaggaaatccttatgcacc 24416  T

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Target: scaffold0338 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 6555 - 6525
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcacc 6525  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 25290 - 25260
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||||    
T  25290 gttatggtgcataaggaaatccttatgcacc 25260  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 28720 - 28687
Alignment:
Q  382 gcggttatggtgcataaggaaatccttatgcacc 415  Q
    ||||||||||||||||||||||||||| ||||||    
T  28720 gcggttatggtgcataaggaaatccttttgcacc 28687  T

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Target: scaffold0189 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 414
Target Start/End: Complemental strand, 11248 - 11219
Alignment:
Q  385 gttatggtgcataaggaaatccttatgcac 414  Q
    ||||||||||||||||||||||||||||||    
T  11248 gttatggtgcataaggaaatccttatgcac 11219  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 17852 - 17889
Alignment:
Q  378 gggtgcggttatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  17852 gggtgcggttatggtgcataagaaaatcattatgcacc 17889  T

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Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 409
Target Start/End: Complemental strand, 17985 - 17957
Alignment:
Q  381 tgcggttatggtgcataaggaaatcctta 409  Q
    |||||||||||||||||||||||||||||    
T  17985 tgcggttatggtgcataaggaaatcctta 17957  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Complemental strand, 72748 - 72715
Alignment:
Q  381 tgcggttatggtgcataaggaaatccttatgcac 414  Q
    |||||||||||||||||| |||||||||||||||    
T  72748 tgcggttatggtgcataacgaaatccttatgcac 72715  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 415
Target Start/End: Complemental strand, 164098 - 164070
Alignment:
Q  387 tatggtgcataaggaaatccttatgcacc 415  Q
    |||||||||||||||||||||||||||||    
T  164098 tatggtgcataaggaaatccttatgcacc 164070  T

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