View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7890_low_14 (Length: 246)
Name: NF7890_low_14
Description: NF7890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7890_low_14 |
 |  |
|
| [»] chr8 (19 HSPs) |
 |  |
|
| [»] chr7 (6 HSPs) |
 |  |
|
| [»] scaffold0147 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2517108 - 2517353
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttgatcagaagtgtgggtgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2517108 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttgatcagaagtgtgggtgc |
2517207 |
T |
 |
| Q |
101 |
tagagaattcaaaacagtctaacttaaaaaccagaatattcatcgtttatgcaggaggcatatgcacatataacaacataatcagataaataccttctct |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2517208 |
tagagaattcaaaacagtataacttaaaaaccagaatattcatcgtttatgcaggaggcatatgcacatataacaacataatcagataaataccttctct |
2517307 |
T |
 |
| Q |
201 |
ttacttccagcacttccaacaacatagcaaccatgcaatttagcaa |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2517308 |
ttacttccagcacttccaacaacatagcaaccatgcaatttagcaa |
2517353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 1459169 - 1459092
Alignment:
| Q |
168 |
atataacaaca-taatcagataaataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagc |
244 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1459169 |
atataacaacaataatcagacaaataccttctctttacttccagcacttccaacgacatagcaaccatgcaatttagc |
1459092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 2428876 - 2428799
Alignment:
| Q |
168 |
atataacaaca-taatcagataaataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagc |
244 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2428876 |
atataacaacaataatcagacaaataccttctctttacttccagcacttccaacgacatagcaaccatgcaatttagc |
2428799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 2512912 - 2512991
Alignment:
| Q |
166 |
acatataacaaca-taatcagataaataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagc |
244 |
Q |
| |
|
|||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2512912 |
acatgtaacaacaataattagataaataccttctctttacttccagcacttccaacgacatagcaaccatgcaatttagc |
2512991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 2506297 - 2506378
Alignment:
| Q |
164 |
gcacatataacaacat-aatcagataaataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagc |
244 |
Q |
| |
|
||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
2506297 |
gcacatataacaacaacaatcagacatataccttctctttacttccagcacttccaacgacttagcaaccatgcaatttagc |
2506378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 2431832 - 2431774
Alignment:
| Q |
188 |
aaataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagcaa |
246 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
2431832 |
aaataccttttctttagttccagcacttccaacaacataacaaccatgcaattttgcaa |
2431774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 10170437 - 10170375
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagatacc |
70 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||| |||||| |
|
|
| T |
10170437 |
taataatttgagaaaataaattaattgaatgtaactacatgggttgtgttggtgtctgatacc |
10170375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 34259849 - 34259803
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||| |||||| |
|
|
| T |
34259849 |
cggtaataatttgagaaaatgaaataattgaatataactagacgtgt |
34259803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 2497596 - 2497633
Alignment:
| Q |
189 |
aataccttctctttacttccagcacttccaacaacata |
226 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2497596 |
aataccttctctttacttccagcacttcctacaacata |
2497633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 25799154 - 25799187
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgt |
39 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
25799154 |
ggtaataatttgagaaaatgaattaattgaatgt |
25799187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1979413 - 1979453
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1979413 |
acaccggtaataatttgagaaaattaattaattaaatgtaa |
1979453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 2435220 - 2435164
Alignment:
| Q |
190 |
ataccttctctttacttccagcacttccaacaacatagcaaccatgcaatttagcaa |
246 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||| |||||||||| ||| |||| |
|
|
| T |
2435220 |
ataccttttcttttgttccagcacttccaacaacataacaaccatgcagttttgcaa |
2435164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3066043 - 3066083
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3066043 |
acacaggtaataatttgagaaaatggattaattgaatgtaa |
3066083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 16824392 - 16824426
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgt |
39 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
16824392 |
cggtaataatttgagaaaatgaattatttgaatgt |
16824426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 31551891 - 31551857
Alignment:
| Q |
3 |
accggtaataatttgagaaaatgaattaattgaat |
37 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
31551891 |
accggtaataatttgagaaaatgaataaattgaat |
31551857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 43534933 - 43534975
Alignment:
| Q |
9 |
aataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
43534933 |
aataatttgagaaaatgaaatatttgaatgtaactacatgtgt |
43534975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 25488801 - 25488834
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgt |
39 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
25488801 |
ggtattaatttgagaaaatgaattaattgaatgt |
25488834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 28144103 - 28144067
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
28144103 |
cggtaataatttgagaaaatcaattaatagaatgtaa |
28144067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 29096951 - 29096987
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
29096951 |
cggtaataatttaagaaaataaattaattgaatgtaa |
29096987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 946123 - 946159
Alignment:
| Q |
210 |
gcacttccaacaacatagcaaccatgcaatttagcaa |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
946123 |
gcacttccaacaacatagcaaccatgcaatttagcaa |
946159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28266475 - 28266515
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
28266475 |
acaccggtaataatttgagaaaataaattaattggatgtaa |
28266515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 31020749 - 31020714
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaa |
36 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31020749 |
acaccggtaacaatttgagaaaatgaattaattgaa |
31020714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 7139494 - 7139462
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatg |
38 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
7139494 |
ggtaatattttgagaaaatgaattaattgaatg |
7139462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 13859528 - 13859556
Alignment:
| Q |
7 |
gtaataatttgagaaaatgaattaattga |
35 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13859528 |
gtaataatttgagaaaatgaattaattga |
13859556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40826516 - 40826552
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaat |
37 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
40826516 |
acactggtgataatttgagaaaatgaattaattgaat |
40826552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34625735 - 34625775
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34625735 |
acaccgataataatttgagaaaatgaattaattgaatgtaa |
34625775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34598539 - 34598579
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
34598539 |
acaccgataataatttgagaaaatgaattaattggatgtaa |
34598579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 6294587 - 6294557
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaatg |
38 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
6294587 |
taataatttgagaaaatgaattaattgaatg |
6294557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 14244085 - 14244051
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattga |
35 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14244085 |
acaccggtagtaatttgagaaaatgaattaattga |
14244051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 32577520 - 32577482
Alignment:
| Q |
3 |
accggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
32577520 |
accggtgatgatttgagaaaatgaattaattgaatgtaa |
32577482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 4945264 - 4945301
Alignment:
| Q |
4 |
ccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4945264 |
ccggtaattgtttgagaaaatgaattaattgaatgtaa |
4945301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 7564214 - 7564182
Alignment:
| Q |
9 |
aataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |
|
|
| T |
7564214 |
aataatttgagaaaataaattaattgaatgtaa |
7564182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30781456 - 30781416
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||||||| |||||||| |||||||||||| ||||||||| |
|
|
| T |
30781456 |
acaccggtactaatttgataaaatgaattaactgaatgtaa |
30781416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32369970 - 32369930
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
32369970 |
acaccgataataatttgagaaaatgaattaattgaatgtaa |
32369930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 18783987 - 18784029
Alignment:
| Q |
10 |
ataatttgagaaaatgaattaattgaatgtaactacacgtgtt |
52 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
18783987 |
ataatttgagaaaatgaagtaattgaatgtaattacacgtgtt |
18784029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3458223 - 3458172
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt |
52 |
Q |
| |
|
||||||||||||| | ||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
3458223 |
acaccggtaataaatggagaaaatgaaataattgaatgtaattatacgtgtt |
3458172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 31277081 - 31277042
Alignment:
| Q |
2 |
caccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
31277081 |
caccgataataatttgagaaaatgaactaattgaatgtaa |
31277042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 37
Target Start/End: Original strand, 2796554 - 2796583
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaat |
37 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
2796554 |
taataatttgagaaaatgaattaattgaat |
2796583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12441829 - 12441788
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaac |
42 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||| |||| |
|
|
| T |
12441829 |
acaccggtaatactttgagaaaatgaatcaattgaatctaac |
12441788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 26369484 - 26369447
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaac |
42 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
26369484 |
cggtagtaatttgagaaaatgaattatttgaatgtaac |
26369447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 843199 - 843159
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
843199 |
acactggtaataatttgagaaaatgaattatttgaacgtaa |
843159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 12710008 - 12710044
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
12710008 |
cggtaataatttgagaaaataaattaattgaacgtaa |
12710044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 49636879 - 49636844
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
49636879 |
ggtaataatttgagaaaatgaattaattgaatgtaa |
49636844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 7513410 - 7513338
Alignment:
| Q |
20 |
aaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttgatcagaagtgt |
94 |
Q |
| |
|
|||||||||| ||||||||||| |||| |||| ||||||||| ||| |||||| | | |||||||||||||||| |
|
|
| T |
7513410 |
aaaatgaatttattgaatgtaattaca--tgttgtgttggtgttagacaccagatacggctttgatcagaagtgt |
7513338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28576717 - 28576767
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||| |||| |
|
|
| T |
28576717 |
acaccggtaataatttgagaaaatgacaaaattgaatgtaattacatgtgt |
28576767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 18268056 - 18268023
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
18268056 |
taataatttgagaaaatgaattaattgaacgtaa |
18268023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 21768612 - 21768657
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| ||| |||| |
|
|
| T |
21768612 |
ggtaataatttgagaaaatgaattatttgaacgtaaccacatgtgt |
21768657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 55053787 - 55053828
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgtaactacac |
47 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
55053787 |
ggtaataatttaagaaaatgaattatatgaatgtaactacac |
55053828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 31207845 - 31207885
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgtaactaca |
46 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
31207845 |
ggtaattatttgagaaaatgacataattgaatgtaactaca |
31207885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32166241 - 32166201
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32166241 |
acactggtaataatttgagaaaatgacataattgaatgtaa |
32166201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36301998 - 36302034
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
36301998 |
cggtaataatgtgagaaaataaattaattgaatgtaa |
36302034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 41036820 - 41036776
Alignment:
| Q |
7 |
gtaataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
41036820 |
gtaataatttgagaaaatgatatagttgaatgtaaccacacgtgt |
41036776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47542536 - 47542576
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||| |||||||||||||||||||||| || |||||||||| |
|
|
| T |
47542536 |
acactggtaataatttgagaaaatgaactatttgaatgtaa |
47542576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 26698236 - 26698193
Alignment:
| Q |
5 |
cggtaataatttgagaaaatgaattaattgaatgtaactacacg |
48 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
26698236 |
cggtaataatctgagaaaatgaattaattgaatgtaattacacg |
26698193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29230066 - 29230106
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29230066 |
acaccggtaataatttgagaaaatgacataattgaatgtaa |
29230106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 38594210 - 38594284
Alignment:
| Q |
20 |
aaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttgatcagaagtgt |
94 |
Q |
| |
|
||||||||||||||||| ||| || ||||| ||||||||||||| |||| ||| |||||| ||||||||||| |
|
|
| T |
38594210 |
aaaatgaattaattgaacataatcacgtgtgttgtgttggtgtcagacaccacacacgcctttcatcagaagtgt |
38594284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 48317604 - 48317638
Alignment:
| Q |
7 |
gtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |
|
|
| T |
48317604 |
gtaataatttgagaaaatgaaataattgaatgtaa |
48317638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 4769360 - 4769327
Alignment:
| Q |
7 |
gtaataatttgagaaaatgaattaattgaatgta |
40 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
4769360 |
gtaataatttgagaaaatgagttaattgaatgta |
4769327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6440907 - 6440870
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatg |
38 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
6440907 |
acactggtaataatttgagaaaatgaatttattgaatg |
6440870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1118454 - 1118414
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
1118454 |
acacgggtgataatttgaaaaaatgaattaattgaatgtaa |
1118414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 28322251 - 28322351
Alignment:
| Q |
10 |
ataatttgagaaaatgaattaattgaatgtaactacacgtgtt------atgttggtgtcagataccagacatgcctttgatcagaagtgtgggtgctag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||| ||| | |||| ||||| |||||||||| |||||||||||| |||||||| |
|
|
| T |
28322251 |
ataatttgagaaaatgaattaattgaatgtaatcacatgtgttggtgtagtgtcgatgtcggatactggacatgccttcgatcagaagtgtcggtgctag |
28322350 |
T |
 |
| Q |
104 |
a |
104 |
Q |
| |
|
| |
|
|
| T |
28322351 |
a |
28322351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 6742652 - 6742701
Alignment:
| Q |
192 |
accttctctttacttccagcacttccaacaacatagcaaccatgcaattt |
241 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
6742652 |
accttttctttagttccagcacttccaacaacataaaaaccacgcaattt |
6742701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 9878083 - 9878050
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
9878083 |
taataatttgagaatatgaattaattgaatgtaa |
9878050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 39828473 - 39828518
Alignment:
| Q |
7 |
gtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt |
52 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||| ||||| |
|
|
| T |
39828473 |
gtaataatttgagaatatgaaataattgaatgtaaccacatgtgtt |
39828518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11781621 - 11781576
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactaca |
46 |
Q |
| |
|
||||| ||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
11781621 |
acaccagtaataatttgagaaaatgaaatatttgaatgtaactaca |
11781576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14268791 - 14268751
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
14268791 |
acaccggtaataatttgagaaaatgacttaattgaacgtaa |
14268751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 13252358 - 13252319
Alignment:
| Q |
2 |
caccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
13252358 |
caccggtaataatgtgagaaaatgaattagttgaatgtaa |
13252319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6736491 - 6736532
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaac |
42 |
Q |
| |
|
||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
6736491 |
acaccggtaataatttgagaatatggaataattgaatgtaac |
6736532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 28341328 - 28341365
Alignment:
| Q |
4 |
ccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
28341328 |
ccggtaatagtttgagaaaatgaattaattaaatgtaa |
28341365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 30563417 - 30563474
Alignment:
| Q |
8 |
taataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcag |
65 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||| | ||||| ||| |||||||| |
|
|
| T |
30563417 |
taataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtcag |
30563474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31095144 - 31095197
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaat-gaattaattgaatgtaactacacgtgtta |
53 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||||||| |||||||| |||||| |
|
|
| T |
31095144 |
acactggtaataatttgagaaaatggaagtaattgaatataactacatgtgtta |
31095197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34687007 - 34687048
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatga-attaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
34687007 |
acaccggtaataatttgagaaaatgatattaattgaaagtaa |
34687048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34709419 - 34709460
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatga-attaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
34709419 |
acaccggtaataatttgagaaaatgatattaattgaaagtaa |
34709460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39459790 - 39459835
Alignment:
| Q |
6 |
ggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt |
51 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
39459790 |
ggtaataatttaaggaaatgaattaattgaatgtaatcacacgtgt |
39459835 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8765459 - 8765419
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
8765459 |
acaccggtgataatttaagaaaacgaattaattgaatgtaa |
8765419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 17427359 - 17427327
Alignment:
| Q |
9 |
aataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
17427359 |
aataatttgagaaaatgaattaattgaaggtaa |
17427327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42043255 - 42043215
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaa |
41 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||||||||||| |
|
|
| T |
42043255 |
acaccgataataatttaataaaatgaattaattgaatgtaa |
42043215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0147 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37721 - 37670
Alignment:
| Q |
1 |
acaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt |
52 |
Q |
| |
|
||||||||||||| | ||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
37721 |
acaccggtaataaatggagaaaatgaaataattgaatgtaattatacgtgtt |
37670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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