View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7891_low_7 (Length: 255)

Name: NF7891_low_7
Description: NF7891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7891_low_7
NF7891_low_7
[»] chr4 (37 HSPs)
chr4 (12-247)||(20770876-20771110)
chr4 (105-214)||(37109320-37109429)
chr4 (98-201)||(2184994-2185097)
chr4 (97-209)||(7292759-7292871)
chr4 (97-197)||(38869783-38869883)
chr4 (98-190)||(44194946-44195038)
chr4 (97-168)||(4249221-4249292)
chr4 (110-165)||(10048027-10048082)
chr4 (97-167)||(27372618-27372688)
chr4 (97-165)||(7539637-7539704)
chr4 (97-168)||(23378000-23378071)
chr4 (98-212)||(51250484-51250598)
chr4 (97-214)||(31759619-31759736)
chr4 (120-213)||(46545710-46545803)
chr4 (120-212)||(7949438-7949530)
chr4 (97-157)||(15180793-15180853)
chr4 (97-213)||(28635695-28635811)
chr4 (98-190)||(33632098-33632190)
chr4 (97-216)||(37274420-37274540)
chr4 (97-162)||(6666387-6666452)
chr4 (97-190)||(16581715-16581808)
chr4 (131-212)||(21660139-21660220)
chr4 (131-212)||(21668903-21668984)
chr4 (127-188)||(31802037-31802098)
chr4 (119-168)||(51622529-51622578)
chr4 (105-165)||(21404790-21404850)
chr4 (120-168)||(29195139-29195186)
chr4 (97-168)||(8030165-8030236)
chr4 (98-168)||(19680750-19680820)
chr4 (134-168)||(32992656-32992690)
chr4 (98-168)||(51969061-51969131)
chr4 (136-213)||(31826608-31826685)
chr4 (119-168)||(46295141-46295190)
chr4 (119-168)||(49576877-49576926)
chr4 (97-213)||(1730450-1730566)
chr4 (120-168)||(2622379-2622427)
chr4 (97-165)||(24991574-24991642)
[»] chr7 (53 HSPs)
chr7 (97-213)||(26459371-26459487)
chr7 (110-213)||(33869419-33869522)
chr7 (97-213)||(17113794-17113910)
chr7 (120-212)||(23552118-23552210)
chr7 (98-201)||(37162312-37162415)
chr7 (98-212)||(43215184-43215298)
chr7 (97-213)||(39631843-39631959)
chr7 (98-176)||(29785263-29785341)
chr7 (97-213)||(18363695-18363810)
chr7 (118-214)||(22760861-22760957)
chr7 (97-212)||(17040973-17041088)
chr7 (97-212)||(25655189-25655304)
chr7 (105-212)||(48716280-48716383)
chr7 (118-163)||(29538544-29538589)
chr7 (97-216)||(2962456-2962574)
chr7 (97-212)||(20335792-20335907)
chr7 (101-164)||(21569997-21570060)
chr7 (133-188)||(30217903-30217958)
chr7 (97-212)||(35119383-35119498)
chr7 (97-167)||(21558173-21558243)
chr7 (99-188)||(27255357-27255446)
chr7 (105-189)||(13106751-13106834)
chr7 (120-212)||(30579335-30579427)
chr7 (98-213)||(24513796-24513911)
chr7 (98-209)||(45976885-45976996)
chr7 (120-214)||(4566412-4566506)
chr7 (119-213)||(15137552-15137646)
chr7 (99-188)||(27266783-27266872)
chr7 (130-207)||(41519258-41519335)
chr7 (105-165)||(11700212-11700271)
chr7 (98-206)||(21877814-21877922)
chr7 (97-168)||(7721413-7721484)
chr7 (98-165)||(7744074-7744141)
chr7 (98-165)||(22308103-22308170)
chr7 (97-212)||(23301563-23301678)
chr7 (105-176)||(37094785-37094856)
chr7 (119-162)||(48582820-48582863)
chr7 (98-168)||(24438209-24438279)
chr7 (105-195)||(33222387-33222477)
chr7 (98-211)||(2495798-2495911)
chr7 (120-165)||(27313718-27313763)
chr7 (119-168)||(29385726-29385775)
chr7 (133-214)||(30442486-30442567)
chr7 (120-168)||(2882994-2883042)
chr7 (98-174)||(5672531-5672607)
chr7 (98-174)||(5697583-5697659)
chr7 (132-168)||(7309400-7309436)
chr7 (101-213)||(7801179-7801291)
chr7 (132-212)||(14058253-14058333)
chr7 (132-212)||(14368281-14368361)
chr7 (97-209)||(15905635-15905746)
chr7 (120-168)||(31835236-31835284)
chr7 (98-190)||(47824563-47824654)
[»] chr1 (42 HSPs)
chr1 (98-210)||(33700735-33700847)
chr1 (98-212)||(36371470-36371584)
chr1 (100-212)||(8904414-8904526)
chr1 (97-200)||(2799874-2799977)
chr1 (97-212)||(8177143-8177258)
chr1 (97-212)||(4566548-4566662)
chr1 (98-208)||(1247117-1247227)
chr1 (105-213)||(9165164-9165272)
chr1 (119-212)||(51814494-51814587)
chr1 (101-209)||(15786286-15786393)
chr1 (98-190)||(50919976-50920068)
chr1 (97-168)||(11063600-11063671)
chr1 (98-201)||(35699963-35700068)
chr1 (97-214)||(17745218-17745334)
chr1 (97-157)||(29738253-29738313)
chr1 (105-165)||(32524378-32524438)
chr1 (130-214)||(51703777-51703861)
chr1 (97-156)||(40810523-40810582)
chr1 (118-168)||(3265968-3266018)
chr1 (98-144)||(29056446-29056492)
chr1 (119-168)||(31605831-31605880)
chr1 (119-212)||(37400274-37400367)
chr1 (135-212)||(40257399-40257476)
chr1 (137-213)||(7743326-7743402)
chr1 (120-212)||(21547464-21547556)
chr1 (97-157)||(29753704-29753764)
chr1 (134-190)||(52029935-52029991)
chr1 (132-214)||(50901579-50901662)
chr1 (98-144)||(3679276-3679322)
chr1 (134-212)||(19528325-19528403)
chr1 (118-168)||(43446007-43446057)
chr1 (97-190)||(1094547-1094640)
chr1 (120-201)||(6650606-6650687)
chr1 (119-212)||(12259260-12259353)
chr1 (97-162)||(15167053-15167118)
chr1 (97-214)||(16893392-16893509)
chr1 (134-195)||(48615341-48615402)
chr1 (97-165)||(10526870-10526938)
chr1 (120-200)||(12993907-12993987)
chr1 (97-213)||(14787297-14787413)
chr1 (97-168)||(21392881-21392952)
chr1 (120-168)||(30203211-30203259)
[»] chr2 (39 HSPs)
chr2 (105-213)||(40416359-40416467)
chr2 (98-212)||(42922414-42922529)
chr2 (97-212)||(34041549-34041664)
chr2 (97-212)||(4060175-4060290)
chr2 (98-168)||(13803539-13803609)
chr2 (97-213)||(5147641-5147756)
chr2 (97-212)||(42602554-42602669)
chr2 (98-212)||(14500277-14500391)
chr2 (119-212)||(42327378-42327471)
chr2 (99-168)||(45026787-45026856)
chr2 (97-213)||(4438940-4439056)
chr2 (97-168)||(2750587-2750658)
chr2 (105-212)||(19244109-19244216)
chr2 (97-168)||(30410510-30410581)
chr2 (97-211)||(16918539-16918653)
chr2 (97-167)||(37755932-37756002)
chr2 (97-165)||(21303955-21304023)
chr2 (97-168)||(25637195-25637266)
chr2 (97-167)||(14780551-14780621)
chr2 (134-212)||(29503271-29503349)
chr2 (134-168)||(40791488-40791522)
chr2 (132-209)||(7415998-7416075)
chr2 (136-213)||(12994376-12994453)
chr2 (136-213)||(42860347-42860424)
chr2 (124-208)||(3001383-3001467)
chr2 (97-213)||(11062359-11062474)
chr2 (120-212)||(11251087-11251179)
chr2 (97-168)||(19322812-19322883)
chr2 (133-176)||(26545876-26545919)
chr2 (120-167)||(30943134-30943180)
chr2 (97-212)||(37480075-37480190)
chr2 (98-168)||(21195638-21195708)
chr2 (134-212)||(39714992-39715070)
chr2 (97-162)||(40755644-40755708)
chr2 (119-168)||(41908621-41908670)
chr2 (132-168)||(4262298-4262334)
chr2 (121-153)||(9318060-9318092)
chr2 (133-197)||(32650593-32650657)
chr2 (120-168)||(37971939-37971987)
[»] chr8 (33 HSPs)
chr8 (97-213)||(33017213-33017328)
chr8 (97-212)||(12988428-12988542)
chr8 (97-212)||(18540298-18540413)
chr8 (97-210)||(8794307-8794419)
chr8 (120-201)||(35690048-35690129)
chr8 (120-212)||(968362-968454)
chr8 (120-214)||(23361633-23361727)
chr8 (98-168)||(31408084-31408154)
chr8 (97-190)||(1157081-1157174)
chr8 (98-174)||(11928693-11928769)
chr8 (97-168)||(6536564-6536635)
chr8 (98-212)||(20994419-20994534)
chr8 (97-212)||(28783060-28783175)
chr8 (97-212)||(30483845-30483960)
chr8 (132-210)||(3624582-3624660)
chr8 (98-212)||(6569733-6569847)
chr8 (134-212)||(16852340-16852418)
chr8 (134-212)||(19703485-19703563)
chr8 (105-162)||(12205938-12205994)
chr8 (105-162)||(12450366-12450422)
chr8 (98-214)||(33727835-33727951)
chr8 (119-210)||(2203494-2203585)
chr8 (105-164)||(13129716-13129775)
chr8 (120-166)||(3305172-3305218)
chr8 (98-168)||(6436517-6436587)
chr8 (118-212)||(8059632-8059726)
chr8 (98-168)||(24675474-24675544)
chr8 (119-213)||(35287715-35287809)
chr8 (133-190)||(11492070-11492127)
chr8 (121-190)||(11942864-11942932)
chr8 (120-160)||(18386422-18386462)
chr8 (120-168)||(18897210-18897258)
chr8 (101-173)||(36627501-36627573)
[»] chr6 (26 HSPs)
chr6 (97-212)||(12188264-12188379)
chr6 (97-156)||(11306135-11306194)
chr6 (133-210)||(32613137-32613214)
chr6 (120-212)||(33549104-33549196)
chr6 (97-212)||(3779339-3779454)
chr6 (97-168)||(7320764-7320834)
chr6 (98-212)||(13330087-13330201)
chr6 (98-168)||(15951264-15951334)
chr6 (98-171)||(10650001-10650074)
chr6 (120-165)||(24256806-24256851)
chr6 (120-168)||(9583410-9583457)
chr6 (132-212)||(12234503-12234583)
chr6 (97-168)||(23910074-23910143)
chr6 (132-168)||(28841458-28841494)
chr6 (97-168)||(28363981-28364052)
chr6 (132-214)||(3715450-3715532)
chr6 (130-208)||(6776601-6776679)
chr6 (120-158)||(28028583-28028621)
chr6 (132-213)||(13227154-13227235)
chr6 (119-168)||(20863419-20863468)
chr6 (132-189)||(34786450-34786507)
chr6 (100-168)||(2092495-2092563)
chr6 (132-212)||(2616476-2616556)
chr6 (120-168)||(3907578-3907625)
chr6 (120-168)||(6691535-6691582)
chr6 (105-212)||(19637968-19638080)
[»] chr5 (32 HSPs)
chr5 (97-216)||(25627053-25627171)
chr5 (110-212)||(14285161-14285263)
chr5 (111-212)||(34984806-34984907)
chr5 (97-213)||(7918430-7918546)
chr5 (97-214)||(29075779-29075896)
chr5 (120-212)||(16773807-16773899)
chr5 (97-212)||(21549099-21549213)
chr5 (98-168)||(25979214-25979284)
chr5 (97-213)||(19043457-19043572)
chr5 (105-201)||(43442207-43442303)
chr5 (121-215)||(3252274-3252368)
chr5 (98-168)||(37258328-37258398)
chr5 (97-166)||(17155868-17155937)
chr5 (136-212)||(87423-87499)
chr5 (97-153)||(30000175-30000231)
chr5 (97-156)||(16638871-16638930)
chr5 (98-212)||(30700580-30700692)
chr5 (98-168)||(11375157-11375227)
chr5 (120-214)||(14495789-14495883)
chr5 (105-167)||(18595970-18596032)
chr5 (134-212)||(30883196-30883274)
chr5 (97-162)||(2269185-2269250)
chr5 (105-168)||(5156094-5156157)
chr5 (109-156)||(26078024-26078071)
chr5 (98-212)||(30735029-30735146)
chr5 (134-168)||(84868-84902)
chr5 (120-214)||(6844727-6844821)
chr5 (120-186)||(12669498-12669564)
chr5 (105-167)||(18974005-18974067)
chr5 (127-160)||(6629892-6629925)
chr5 (137-173)||(27123893-27123929)
chr5 (120-168)||(31074276-31074324)
[»] chr3 (39 HSPs)
chr3 (97-212)||(46518628-46518743)
chr3 (98-212)||(37788428-37788541)
chr3 (97-212)||(27093323-27093437)
chr3 (97-212)||(30311306-30311421)
chr3 (105-209)||(53412948-53413052)
chr3 (98-212)||(15048023-15048137)
chr3 (97-212)||(34062509-34062626)
chr3 (132-213)||(14186647-14186727)
chr3 (123-212)||(16354879-16354968)
chr3 (97-213)||(8170671-8170787)
chr3 (118-165)||(8796075-8796122)
chr3 (98-213)||(28703366-28703481)
chr3 (122-213)||(49494132-49494223)
chr3 (97-213)||(10445100-10445217)
chr3 (120-212)||(4222141-4222233)
chr3 (134-212)||(8368797-8368875)
chr3 (97-155)||(10969878-10969936)
chr3 (98-144)||(26673282-26673328)
chr3 (122-168)||(39253741-39253787)
chr3 (97-190)||(4844472-4844565)
chr3 (97-190)||(4870168-4870261)
chr3 (120-212)||(5499391-5499483)
chr3 (124-168)||(36010786-36010830)
chr3 (118-177)||(3427535-3427594)
chr3 (97-212)||(10499070-10499185)
chr3 (110-165)||(10828707-10828762)
chr3 (97-168)||(20501740-20501810)
chr3 (97-168)||(27259205-27259276)
chr3 (127-190)||(29563922-29563985)
chr3 (111-214)||(40063617-40063720)
chr3 (120-211)||(47454601-47454692)
chr3 (119-201)||(2709388-2709470)
chr3 (138-168)||(39976433-39976463)
chr3 (119-168)||(19154675-19154724)
chr3 (120-153)||(39041965-39041998)
chr3 (97-190)||(51903839-51903932)
chr3 (120-168)||(4252509-4252556)
chr3 (98-162)||(7902678-7902742)
chr3 (120-212)||(8051214-8051306)
[»] scaffold0070 (1 HSPs)
scaffold0070 (97-212)||(42482-42596)
[»] scaffold0004 (1 HSPs)
scaffold0004 (98-177)||(81526-81605)
[»] scaffold0063 (1 HSPs)
scaffold0063 (98-214)||(35351-35467)
[»] scaffold0238 (1 HSPs)
scaffold0238 (98-165)||(2673-2740)
[»] scaffold0118 (1 HSPs)
scaffold0118 (119-214)||(41616-41711)
[»] scaffold0187 (2 HSPs)
scaffold0187 (98-214)||(12383-12500)
scaffold0187 (98-214)||(22711-22828)
[»] scaffold0002 (1 HSPs)
scaffold0002 (120-209)||(94955-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (119-190)||(13029-13100)
[»] scaffold0258 (1 HSPs)
scaffold0258 (120-212)||(15307-15399)
[»] scaffold0180 (1 HSPs)
scaffold0180 (105-201)||(19932-20027)
[»] scaffold0211 (1 HSPs)
scaffold0211 (97-212)||(24053-24168)
[»] scaffold0126 (1 HSPs)
scaffold0126 (117-168)||(25328-25379)
[»] scaffold0517 (1 HSPs)
scaffold0517 (119-212)||(7709-7802)
[»] scaffold0006 (1 HSPs)
scaffold0006 (97-167)||(18344-18413)
[»] scaffold0299 (1 HSPs)
scaffold0299 (130-199)||(11541-11610)


Alignment Details
Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 20771110 - 20770876
Alignment:
Q  12 tgatatgaatatgtgtgatatggcgatgggttatttaatgatgtataactgtcaagtgaagctatgcattgnnnnnnnnnnnnnngaagaagttaaatta 111  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||               ||||||||||||||    
T  20771110 tgatatgaatatgtatgatatgacgatgggttatttaatgatgtgtaactttcaagtgaagctatgcattgtttttttttttttt-aagaagttaaatta 20771012  T
Q  112 accccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggt 211  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  20771011 accccctcaaattggcacctgagagaatcgaacttgagaccttgagaaggaacacacatccagatttcaagccaatatccctaggccaacgcaagtgggt 20770912  T
Q  212 taagttatgcattgttgatgtcatatatgatgtcca 247  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20770911 taagttatgcattgttgatgtcatatatggtgtcca 20770876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 37109320 - 37109429
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    |||| ||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||  |||| |  |||| ||||||| |||||||||| ||    
T  37109320 taaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 37109419  T
Q  205 agtgggttaa 214  Q
    ||||||||||    
T  37109420 agtgggttaa 37109429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 2184994 - 2185097
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||  |||| || |||| || |||| ||||||    
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggc 2185093  T
Q  198 caac 201  Q
    ||||    
T  2185094 caac 2185097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 7292759 - 7292871
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| |||||||||||  |||||||||||||| |||||| ||||| ||||||||||  |||| || |||| ||||||| ||||     
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactaga 7292858  T
Q  197 ccaacgcaagtgg 209  Q
    ||||| |||||||    
T  7292859 ccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 38869883 - 38869783
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||| ||||| ||||||||| |||||||||||| ||||||||||  ||||||  |||| ||||||| |||||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactagg 38869784  T
Q  197 c 197  Q
    |    
T  38869783 c 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 44194946 - 44195038
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||| |||| || ||||||||||| |||||||||| |||| ||||||||||||||| | ||||| |||||||| |||  |||||||    
T  44194946 aagaagttaaactaactccctcaaattggcaccagagagaattgaacatgagaccttgagaagaaacacacttccagattccaaaccaatacc 44195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 4249292 - 4249221
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||    
T  4249292 gaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacac 4249221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 10048082 - 10048027
Alignment:
Q  110 taaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  10048082 taaccccttcaaattagcatcagagagaatcgaacctgagaccatgagaaggagca 10048027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 27372618 - 27372688
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||| |  |||||||||    
T  27372618 gaagaagctaaattaaccccttcaaattggcatcagagataatcgaacctaagaccttaaagaggagcaca 27372688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 7539704 - 7539637
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||||||||| |||||||| ||||||| ||  |||||||||||||| ||||||||||||||||||||    
T  7539704 gaagaagttaaactaacccct-caaattgacagaagagagaatcgaacctgagaccttgagaaggagca 7539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 23378071 - 23378000
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| || |||| |||||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacac 23378000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| ||||||| |||   |||||||||| | ||| ||||||||||||||| ||||||  |||||||||  ||||||  |||| ||||||| | ||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 31759619 - 31759736
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||| ||||||||||||| | |||| |||||||||  |||||||||||| ||||||||||  |||  |  |||| ||||||| ||||     
T  31759619 gaagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactaga 31759718  T
Q  197 ccaacgcaagtgggttaa 214  Q
     |||| ||||||||||||    
T  31759719 tcaacccaagtgggttaa 31759736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 46545803 - 46545710
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    |||||| ||||||||| |||||||  ||||| |||||| ||||||||||   ||| | ||||| ||||||| |||||||||| |||||||||||    
T  46545803 aaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtta 46545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 7949438 - 7949530
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||||  | || |  |||| ||||||| |||||||| | ||||||||||    
T  7949438 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 15180853 - 15180793
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgag 157  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  15180853 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgag 15180793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 28635811 - 28635695
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||   |||||||||| ||||||||||||||| | ||||||  || ||||||||||  ||||||  ||||||| |||| | |||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccagg 28635712  T
Q  197 ccaacgcaagtgggtta 213  Q
     |||| |||||||||||    
T  28635711 acaacccaagtgggtta 28635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 33632098 - 33632190
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||| ||||||| |||||||| || ||||||||||||| | || ||||||||| ||||||| ||  ||| ||| |||| |||||||    
T  33632098 aagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaatacc 33632190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 37274420 - 37274540
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaa-tacccctag 195  Q
    ||||||| ||||||| |||  | ||||| ||| ||||||||||||||| | |||||||||| ||||||||||  |||| |  |||| ||| |||  ||||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactag 37274519  T
Q  196 gccaacgcaagtgggttaagt 216  Q
    |||||| ||||||||||||||    
T  37274520 gccaacccaagtgggttaagt 37274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 6666387 - 6666452
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||||| |||| ||||||| |||||| |||| ||||||||||||||| ||||| |||||| ||||    
T  6666387 gaagaagctaaactaaccccctcaaatgggcaccagagagaatcgaacctgagatcttgaggagga 6666452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 16581808 - 16581715
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||| |||| ||||||  ||||||||||| |||||| ||| |||| |||||||||||| ||||||| ||  |||| || |||| |||||||    
T  16581808 gaagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaatacc 16581715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 21660139 - 21660220
Alignment:
Q  131 agagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||| ||||||||||||||||| ||| | ||||||||  |||||| ||||||||||||| | || ||||| ||||| ||||    
T  21660139 agagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 21668903 - 21668984
Alignment:
Q  131 agagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||| ||||||||||||||||| ||| | ||||||||  |||||| ||||||||||||| | || ||||| ||||| ||||    
T  21668903 agagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 31802037 - 31802098
Alignment:
Q  127 catcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaata 188  Q
    ||||||||||| |||||| |||||||||||| |||| ||||| |||||||  ||||||||||    
T  31802037 catcagagagagtcgaacatgagaccttgaggaggaccacacttccagatcacaagtcaata 31802098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 51622578 - 51622529
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| |||||||| |||||| |||||||||||| ||||||||||    
T  51622578 caaattggcaccagagagagtcgaacctgagaccttgaggaggagcacac 51622529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 21404790 - 21404850
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||| |||||||||  |||||| ||||||||||||| ||| |||||||||||| |||||||    
T  21404790 taaactaacccctttcaattggtatcagagagaatcaaacatgagaccttgaggaggagca 21404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 29195186 - 29195139
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttgag-aggagcacac 29195139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 8030165 - 8030236
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| ||||||| |||   ||||||| ||  |||| |||||||||||||||||||||| ||||||||||    
T  8030165 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacac 8030236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 19680750 - 19680820
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||| ||||| | | ||||||||| ||||||||||||||| | |||||||||| | ||||||||    
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacac 19680820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 32992690 - 32992656
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||||| ||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacac 32992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 51969131 - 51969061
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||||  || | |||||||||| |||||||||  |||| ||| |||||||| ||||||||||    
T  51969131 aagaagttaaattagtccatccaaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacac 51969061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 31826685 - 31826608
Alignment:
Q  136 gaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    |||||||||||||||||||||| ||||||||||   || ||  |||| | ||||| ||||| |||| |||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtta 31826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 46295190 - 46295141
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| | | ||||||||||| |||||||||||| ||||||||||    
T  46295190 caaattggcaccggggagaatcgaacctgagaccttgaggaggagcacac 46295141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 49576877 - 49576926
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||  ||||||||||||| |||||||||||| ||||||||||    
T  49576877 caaattgacattggagagaatcgaacctgagaccttgaggaggagcacac 49576926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 1730450 - 1730566
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||| ||| ||||||| ||| |||||||||| |||  |||||| ||||  ||||||||||   ||| |  |||| ||||||| |||||    
T  1730450 gaagaagctaaactaatcccctcaaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactagg 1730549  T
Q  197 ccaacgcaagtgggtta 213  Q
     |||| |||||||||||    
T  1730550 tcaacccaagtgggtta 1730566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 2622379 - 2622427
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||||||||||||||| |||||| | ||| ||||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagacatggaggaggagcacac 2622427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 24991642 - 24991574
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||||||||| |||| || ||||||| | |  ||||| |||||||| |||||||||||| |||||||    
T  24991642 gaagaagttaaactaactccctcaaattagtactagagaaaatcgaacctgagaccttgaggaggagca 24991574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 26459371 - 26459487
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||  |||| |  |||| ||||||| |||||    
T  26459371 gaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 26459470  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  26459471 ccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 33869419 - 33869522
Alignment:
Q  110 taaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgg 209  Q
    ||||||| |||||||| || |||||||||||||||  |||||||||||||||||||||| ||||| | ||||| ||||||  |||||||||| |||||||    
T  33869419 taaccccctcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgg 33869518  T
Q  210 gtta 213  Q
    ||||    
T  33869519 gtta 33869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 17113910 - 17113794
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||||  |||| ||  ||| ||||||  |||||    
T  17113910 gaagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactagg 17113811  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||| | |||||||||||    
T  17113810 ccaccccaagtgggtta 17113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 23552210 - 23552118
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||  |||| |  |||||||||| | |||||||||| ||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 37162312 - 37162415
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||| || |||||||  |||| ||||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcccaaatctcaagtctttaccactaggc 37162411  T
Q  198 caac 201  Q
    ||||    
T  37162412 caac 37162415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 43215298 - 43215184
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||||||  | || |  |||| ||||||| |||| |    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagac 43215199  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  43215198 caacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 39631959 - 39631843
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| |||||||||||  |||||||||||||| |||||||||||| ||||||  ||  |||| |  |||| ||||||| |||||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactagg 39631860  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  39631859 ccaacccaagtgggtta 39631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 29785263 - 29785341
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagat 176  Q
    |||||| |||| ||||||| ||||||||||| |||| |||||||||| |||||||||||| |||||||||| |||||||    
T  29785263 aagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagat 29785341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 18363810 - 18363695
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| |||||||| |  |||||||||| ||| |||||||||||| ||||||||||  ||| || ||||| | ||||| |||||    
T  18363810 gaagaagctaaactaacccct-caaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactagg 18363712  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  18363711 ccaacccaagtgggtta 18363695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 22760957 - 22760861
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    ||||||||||||| | ||||||||||| |||||||||||| ||||||||||  |||| |  |||||||||||| | || ||||| ||||||||||||    
T  22760957 tcaaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggttaa 22760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 17040973 - 17041088
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||| ||||   ||||||||||   ||||||||||||| |||||||||||| |||||||||| |||||||  |||| |||| || ||||     
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactaga 17041072  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  17041073 ccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 25655189 - 25655304
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||  |||||||||||||||||| ||||||||||||||| ||| |||||||| |||| |||||   |||||  |||||||||||| |||      
T  25655189 gaagaagctaaaccaaccccttcaaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaa 25655288  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| || |||||||    
T  25655289 ccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 48716383 - 48716280
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    |||||||||||||||||||||||| ||||||||||    ||||||||||| || |||| |||||  ||||||| |||||||||||  ||| ||||||  |    
T  48716383 taaattaaccccttcaaattggcagcagagagaat----cttgagaccttaaggaggaacacactcccagattccaagtcaatactactaagccaactta 48716288  T
Q  205 agtgggtt 212  Q
    ||||||||    
T  48716287 agtgggtt 48716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 29538544 - 29538589
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggag 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29538544 tcaaattggcatcagggagaatcgaacttgagaccttgagaaggag 29538589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 2962574 - 2962456
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||||||||| |||| || |||||||||   ||||||||||||||| ||||| |||||| ||||||||||   ||| || |||  ||||||| ||||     
T  2962574 gaagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactaga 2962475  T
Q  197 ccaacgcaagtgggttaagt 216  Q
    ||||| ||||||||||||||    
T  2962474 ccaac-caagtgggttaagt 2962456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 20335792 - 20335907
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||||||||||| ||| | ||||||| |||| | ||||||||||| |||||||| ||| ||||||||||  |||  |  |||| ||||||| ||||     
T  20335792 gaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctaga 20335891  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  20335892 ccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 21569997 - 21570060
Alignment:
Q  101 aagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagc 164  Q
    |||||||| ||||||| |||||||| || |||||| ||||||||||||||||||||| ||||||    
T  21569997 aagttaaactaaccccctcaaattgacaccagagaaaatcgaacttgagaccttgaggaggagc 21570060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 30217958 - 30217903
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaata 188  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacacttccagatatcaagccaata 30217903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 35119498 - 35119383
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||| ||  |||||||||||| | |||||||||||| ||| | |||||| | ||||| ||| ||||||  |||||||||||| |||||    
T  35119498 gaagaagataaactaatcctctcaaattggcattaaagagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactagg 35119399  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||| ||||||    
T  35119398 ccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 21558243 - 21558173
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    ||||||| |||||||||||    ||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 27255446 - 27255357
Alignment:
Q  99 agaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaata 188  Q
    |||||||||| ||||||| |||| ||| ||||||||| |||| ||| |||||| ||||||||||| | || |||| ||| ||||||||||    
T  27255446 agaagttaaactaaccccctcaatttgacatcagagaaaatcaaacctgagactttgagaaggagtatacttccaaattccaagtcaata 27255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 13106751 - 13106834
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatac 189  Q
    ||||||| |||  ||||||| ||||||||||||||||||| |||||||||||| ||||| |||| |||||||  ||| |||||||    
T  13106751 taaattagcccgctcaaattagcatcagagagaatcgaacctgagaccttgaggaggagtacac-tccagatcccaaatcaatac 13106834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 30579427 - 30579335
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||| |||||| |||||||| |||||||||||| ||| | ||||  |||| | ||||| ||||||| | |||||||| ||||||||||    
T  30579427 aaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 24513911 - 24513796
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||||||||||| |||   ||||||| |||||| || |||||||| ||||||||  || || || ||||  ||| || ||||| ||||||| ||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  198 caacgcaagtgggtta 213  Q
    |||| |||||||||||    
T  24513811 caacccaagtgggtta 24513796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 45976885 - 45976996
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||||||||||||||   | |||||||||||||||| ||  |||||| | ||||| || ||||||||||  |||| |  |||| ||||||| ||||||    
T  45976885 aagaagttaaattaacctacttaaattggcatcagagataaatgaacttaaaaccttaaggaggagcacactcccaggtcacaagccaataccactaggc 45976984  T
Q  198 caacgcaagtgg 209  Q
    |||| |||||||    
T  45976985 caacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 4566412 - 4566506
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||  ||||  | || |   ||||||||||| |||||||||| ||||||| ||||    
T  4566412 aaattggcaccagagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtggattaa 4566506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 15137646 - 15137552
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    ||||||| || ||||||||||| ||| |||||||||||| ||||||||||  | | ||  ||||||| |||| | |||||||| |||||||||||    
T  15137646 caaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 27266872 - 27266783
Alignment:
Q  99 agaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaata 188  Q
    |||||||||| ||||||| |||| ||| |||||||||||||| ||| |||||  ||||||| ||||| || | || ||| ||||||||||    
T  27266872 agaagttaaactaaccccctcaatttgacatcagagagaatcaaacctgagattttgagaatgagcatactttcaaattccaagtcaata 27266783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 41519258 - 41519335
Alignment:
Q  130 cagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagt 207  Q
    ||||||||| ||||| |||||||||||| ||||||||||  | | ||  |||||||||||| |||||||||| |||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 11700271 - 11700212
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||| |||  ||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  11700271 taaattagcccactcaaattggca-cagagagaatcgaacctgagaccttgaggaggagca 11700212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 21877922 - 21877814
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||||||||||| |||  |||| |||||| |   ||||||||||| ||||||||| || |||||||| |  |||| |  |||||||||||| ||||||    
T  21877922 aagaagttaaattagcccactcaatttggcaccgtggagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggc 21877823  T
Q  198 caacgcaag 206  Q
    |||| ||||    
T  21877822 caactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 7721484 - 7721413
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||||||  || | ||||||| || ||||||||||||||| |||||||||||| ||||| ||||    
T  7721484 gaagaagctaaattattccatccaaattgacaccagagagaatcgaacatgagaccttgaggaggagtacac 7721413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 7744074 - 7744141
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||| |||| | ||||| ||||||| ||| ||||||||||| ||| |||||||||||| |||||||    
T  7744074 aagaagctaaactgaccccctcaaatttgcaccagagagaatcaaacctgagaccttgaggaggagca 7744141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 22308170 - 22308103
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||| ||||||| | | |||||||| ||||| | ||||||||||||| |||||||||| |||||||    
T  22308170 aagaagctaaattagctcattcaaatttgcatcggtgagaatcgaacttaagaccttgaggaggagca 22308103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 23301563 - 23301678
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||||||||||||  ||  ||||||| |||  | |||||||| ||||||||||||  || ||||||||||  |||  |  |||||||||||| | |||    
T  23301563 gaagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccagg 23301662  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  23301663 ccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 37094856 - 37094785
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagat 176  Q
    |||| ||||||||||||||| |||  |||||||||| ||  |||||||||||| |||| ||||| |||||||    
T  37094856 taaactaaccccttcaaattagcactagagagaatcaaatgtgagaccttgaggaggatcacacttccagat 37094785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 48582820 - 48582863
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||    
T  48582820 caaattggcatcagagagagttgaacttgagaccttgaggagga 48582863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 24438209 - 24438279
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| ||||||| ||| ||||||||| || ||||||||||||||  ||| ||||| |||| ||||||||    
T  24438209 aagaagctaaattagcccattcaaattgacaccagagagaatcgaatctgaaaccttaagaaagagcacac 24438279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 33222477 - 33222387
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctag 195  Q
    |||| ||||||  |||||||| || ||||||||||||||| |||||||||||| | ||| |||| ||||| |  |||| ||||||| ||||    
T  33222477 taaactaaccctctcaaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccactag 33222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 2495798 - 2495911
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||||||||||||||| || ||||||  || ||||| |||||||| |||||  || || ||||||||||   || || |||||||||||    |||||    
T  2495798 aagaagttaaattaacccatttaaattgatattagagataatcgaacctgagattttaaggaggagcacactcacaaatctcaagtcaatattattaggc 2495897  T
Q  198 caacgcaagtgggt 211  Q
    |||| |||||||||    
T  2495898 caactcaagtgggt 2495911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 27313718 - 27313763
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||||||||||||||||||||  ||| |||||||| |||||||    
T  27313718 aaattggcatcagagagaatcgaatctgaaaccttgaggaggagca 27313763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 29385726 - 29385775
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| || |||||||| ||| |||||||||||| ||||||||||    
T  29385726 caaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacac 29385775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 30442567 - 30442486
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    |||||||||||| | |||||||||| ||||||| ||  |||| |  |||| ||||||| || ||||||| ||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggttaa 30442486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 2883042 - 2882994
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| || |||||||||| |||| |||||||||||| ||||||||||    
T  2883042 aaattgccaccagagagaattgaacctgagaccttgaggaggagcacac 2882994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 5672531 - 5672607
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccag 174  Q
    |||||||||||  |||||| ||||||||  |  | ||||||||||||||||||||||||| | || ||||| |||||    
T  5672531 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccag 5672607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 5697583 - 5697659
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccag 174  Q
    |||||||||||  |||||| ||||||||  |  | ||||||||||||||||||||||||| | || ||||| |||||    
T  5697583 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccag 5697659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 7309436 - 7309400
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  7309436 gagagaatcgaacttgagacctcgaggaggagcacac 7309400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 7801291 - 7801179
Alignment:
Q  101 aagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaa 200  Q
    ||||||||||| |||  | |||||| |||| ||| |  |||||| |||||||||||  ||||||||||  |||| |  |||||||||||| | |||||||    
T  7801291 aagttaaattagcccacttaaattgacatcggaggggttcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaa 7801192  T
Q  201 cgcaagtgggtta 213  Q
      |||||||||||    
T  7801191 accaagtgggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 14058333 - 14058253
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||||| |||||||||||| | ||||||||   ||| || |||| ||||||| | |||||||| |||| |||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14058253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 14368361 - 14368281
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||||| |||||||||||| | ||||||||   ||| || |||| ||||||| | |||||||| |||| |||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14368281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 15905635 - 15905746
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||||||   ||||||| ||| || ||||||||||| ||||||| | || ||||||||||  |||| |  |||| ||||||| | |||    
T  15905635 gaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagacc-taaggaggagcacactcccaggtcccaagccaataccgccagg 15905733  T
Q  197 ccaacgcaagtgg 209  Q
    ||||| |||||||    
T  15905734 ccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 31835284 - 31835236
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||| || |||||||| |||||||||||| ||||||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacac 31835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 47824563 - 47824654
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    |||||| |||||||||| || ||||||| || | |||| |||||||| |||||| ||||| |||||||||| ||  | | |||||||||||||    
T  47824563 aagaagctaaattaaccact-caaattgacaccggagacaatcgaacatgagactttgaggaggagcacacttcatggtctcaagtcaatacc 47824654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    ||||||||||| ||||||| | ||||||||| ||||||||||||||| |||||||||||| ||||||||||  ||||||| |||| ||||||| ||||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  198 caacgcaagtggg 210  Q
    |||| ||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 36371584 - 36371470
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||| || |||| ||||||| ||||||    
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 36371485  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  36371484 caacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 8904526 - 8904414
Alignment:
Q  100 gaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggcca 199  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||   || ||  |||||||||||  ||||||||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggcca 8904427  T
Q  200 acgcaagtgggtt 212  Q
    || ||||||||||    
T  8904426 acccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 2799977 - 2799874
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||  |||||| ||||| | ||||| |||||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactagg 2799878  T
Q  197 ccaa 200  Q
    ||||    
T  2799877 ccaa 2799874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 8177143 - 8177258
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||||||| ||| |||||||| ||||||||||  ||||||  |||| ||||||| |||||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactagg 8177242  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||| ||||||    
T  8177243 ccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 4566662 - 4566548
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||||| |||||| |||||||||||||||||| ||||||| |||| ||||||||||  |||| || |||| ||||| | |||||    
T  4566662 gaagaagctaaactaacccctt-aaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactagg 4566564  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  4566563 ccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 1247227 - 1247117
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||||||||||||| | ||||||||||||||| |||||||||||| ||||| ||||  |||| |||||| ||| |||| ||| ||    
T  1247227 aagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagc 1247128  T
Q  198 caacgcaagtg 208  Q
    |||| ||||||    
T  1247127 caacccaagtg 1247117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 9165164 - 9165272
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    |||| ||||||| ||||||||||| |||||||||| |||| |||||| ||||| ||||||||||  |||| |  |||| ||||||| |||||||||| ||    
T  9165164 taaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 9165263  T
Q  205 agtgggtta 213  Q
    |||||||||    
T  9165264 agtgggtta 9165272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 51814587 - 51814494
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||||| | ||||||||||||| |||||||||||| ||||||||||   ||||| |||||||||||||   |||||||| ||||||||||    
T  51814587 caaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 15786286 - 15786393
Alignment:
Q  101 aagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaa 200  Q
    |||||||| |||||||| ||||||| || || |||||||||||| |||||||||||| ||||||||||  ||||||  |||| ||||||  |||| ||||    
T  15786286 aagttaaactaacccct-caaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaa 15786384  T
Q  201 cgcaagtgg 209  Q
    | |||||||    
T  15786385 cccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 50920068 - 50919976
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    |||||| |||| |||||||||||||||| || ||||||||||||||| ||| ||||| || | ||||||||   ||| |||||||||||||||    
T  50920068 aagaagctaaactaaccccttcaaattgacaccagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaatacc 50919976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 11063671 - 11063600
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| |||||||||||||||||||  |||||||||||||| | |||||||||| |||| |||||    
T  11063671 gaagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacac 11063600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 35700068 - 35699963
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaact--tgagaccttgagaaggagcacacatccagatttcaagtcaatacccctag 195  Q
    |||||| ||||  |||||| | |||||| || |||||||||||||||   |||||||||||| || ||||||| ||||| || |||||||||||| ||||    
T  35700068 aagaagctaaaccaacccccttaaattgacaccagagagaatcgaacccctgagaccttgagcagaagcacacttccagtttccaagtcaataccactag 35699969  T
Q  196 gccaac 201  Q
    ||||||    
T  35699968 gccaac 35699963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 17745218 - 17745334
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||||| | | |||||| || ||||||||||||||| |||||||| ||| ||||||||||   ||| |  |||| ||||||| |||||    
T  17745218 gaagaagctaaattaaccacct-aaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactagg 17745316  T
Q  197 ccaacgcaagtgggttaa 214  Q
    ||||| |||||| |||||    
T  17745317 ccaacccaagtgcgttaa 17745334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 29738313 - 29738253
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgag 157  Q
    ||||||| ||||||||||| | |||||| ||||| ||||||||||||||||||| ||||||    
T  29738313 gaagaagctaaattaacccatccaaattagcatcggagagaatcgaacttgagatcttgag 29738253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 32524438 - 32524378
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||| |||||  |||||||    
T  32524438 taaactaaccccctcaaattggcaccagagagaatcgaacttgagatcttgaagaggagca 32524378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 51703861 - 51703777
Alignment:
Q  130 cagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    ||||||||||||||| ||| || ||||| ||||||||||  ||||||| |||| ||||||| |||| ||||| ||| ||||||||    
T  51703861 cagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggttaa 51703777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 40810582 - 40810523
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttga 156  Q
    ||||||| |||| ||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  40810582 gaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttga 40810523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 3266018 - 3265968
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| | ||||||||||||||| |||||||||||| ||||||||||    
T  3266018 tcaaattggaaccagagagaatcgaacctgagaccttgaggaggagcacac 3265968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 29056492 - 29056446
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaac 144  Q
    |||||||||||||||||| || |||||||||||||||| ||||||||    
T  29056492 aagaagttaaattaacccttttaaattggcatcagagataatcgaac 29056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 31605831 - 31605880
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| | | |||||||||||||||||||||||| ||||||||||    
T  31605831 caaattggcaccggggagaatcgaacttgagaccttgaggaggagcacac 31605880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 37400367 - 37400274
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||||| | || |||||||||||||||||||| || |||||||||| | ||| | ||||| ||||||| | || ||||| ||||| ||||    
T  37400367 caaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 40257476 - 40257399
Alignment:
Q  135 agaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||| ||||||||||||| ||| ||||||||||  |||| | ||||| ||||||| | |||||||| ||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 7743326 - 7743402
Alignment:
Q  137 aatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    ||||||||||||||||| ||| |||| |||||  ||| ||| | ||| |||||| |||||||||| |||||||||||    
T  7743326 aatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggtta 7743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 21547464 - 21547556
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||||||||||||||||| ||| |||| ||| |||||||| |  |||  |  |||| ||||||| |||||||||| ||||| ||||    
T  21547464 aaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 29753764 - 29753704
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgag 157  Q
    ||||||| |||| ||||||  | ||||||||| ||||||||||||||| ||||||||||||    
T  29753764 gaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgag 29753704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 52029935 - 52029991
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||| |||||||||||||||||||||||  | || | |||||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaatacc 52029991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 50901662 - 50901579
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaa-tacccctaggccaacgcaagtgggttaa 214  Q
    |||||||||||| ||||||||| ||| ||||||||||  |||| |  |||| ||| |||| |||||||||| ||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggttaa 50901579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 3679276 - 3679322
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaac 144  Q
    |||||| |||| ||||||| ||||||||||| |||||||||||||||    
T  3679276 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaac 3679322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 19528325 - 19528403
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| |||||||||||| ||||||||||    ||||  |||| ||||||| | |||||||| ||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 43446057 - 43446007
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||| | | ||||||||||| |||||||||||| ||||||||||    
T  43446057 tcaaattggcaccggggagaatcgaacatgagaccttgaggaggagcacac 43446007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 1094640 - 1094547
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||||||| |||    ||||||||| | |||||||||||| ||||||||| | | ||||||||||   ||| || ||||||||||||    
T  1094640 gaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaatacc 1094547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6650687 - 6650606
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaac 201  Q
    |||||| || ||||||||||||||| |||||| ||||| ||||||| ||  || |||  |||| ||||||| ||||||||||    
T  6650687 aaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaac 6650606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 12259353 - 12259260
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||| |||| | |||||||||||||||||| | ||| ||||||||||  ||| ||  ||||| |||| | ||| |||||| ||||||||||    
T  12259353 caaattgacatcggtgagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 15167118 - 15167053
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||||| |||||||| || |||||||||||| |||| |||||||||  |||||||| ||| ||||    
T  15167118 gaagaagctaaattaatccattcaaattggcaccagaaagaatcgaatatgagacctcgaggagga 15167053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 16893509 - 16893392
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||  |||||||| || | |||| |||||||| |||||||| ||| ||||| ||||  ||| || ||||| |||||||   |||    
T  16893509 gaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacagg 16893410  T
Q  197 ccaacgcaagtgggttaa 214  Q
     |||| ||||||||||||    
T  16893409 tcaacccaagtgggttaa 16893392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 48615341 - 48615402
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctag 195  Q
    ||||||| || |||| |||||||||||||||||||  ||||||| ||||| |||||| ||||    
T  48615341 gagaatcaaatttgaaaccttgagaaggagcacactcccagattccaagttaataccactag 48615402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 10526938 - 10526870
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||| |||||||||||   ||||||| |  ||||||||||||||  |||||||||||| |||||||    
T  10526938 gaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagca 10526870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 12993987 - 12993907
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaa 200  Q
    ||||| ||| |||||| |||||||| |||||| |||||||| ||||||  || | ||| |||||||||||| ||| |||||    
T  12993987 aaattagcaccagagataatcgaacctgagactttgagaagaagcacatttcaaaattccaagtcaataccactaagccaa 12993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 14787297 - 14787413
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||  | ||||||  || |||||||||||||| ||| |||||||| || | |||||   ||| | ||||||||||||| |||||    
T  14787297 gaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccactagg 14787396  T
Q  197 ccaacgcaagtgggtta 213  Q
     |||| |||||| ||||    
T  14787397 tcaactcaagtgagtta 14787413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 21392952 - 21392881
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagag-agaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||||| |||  ||||| ||||| ||||| || ||||||| |||||||||||| ||||||||||    
T  21392952 gaagaagttaaattagcccactcaaactggca-cagaggaggatcgaacctgagaccttgaggaggagcacac 21392881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 30203211 - 30203259
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||| ||||    
T  30203211 aaattggcatcggagagaattgaacctgagaccttgaggaggagaacac 30203259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 40416359 - 40416467
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||| || ||||||| ||  |||| || |||||||||||| |||||||||| ||    
T  40416359 taaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaaccca 40416458  T
Q  205 agtgggtta 213  Q
    |||||||||    
T  40416459 agtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 42922529 - 42922414
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagacc-ttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||| |||| ||||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||  |||| || |||| ||||||| |||||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactagg 42922430  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  42922429 ccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 34041549 - 34041664
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||| ||||| ||||| ||| |||||||||||| ||||||||||   |||||   ||||||||||| |||||    
T  34041549 gaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactagg 34041648  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  34041649 ccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 4060175 - 4060290
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| |||||||| || ||||||||||||||| ||||| |||||| || |||||||   ||| ||||||  ||||||| |||||    
T  4060175 gaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactagg 4060274  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  4060275 ccaacccaagtgggtt 4060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 13803609 - 13803539
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  13803609 aagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacac 13803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 5147641 - 5147756
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| ||||||||    |||||||||||||   ||||||||||||||||||| ||  |||||| ||||||||||||| ||||     
T  5147641 gaagaagctaaactaacccct-caaattggtgcaagagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactaga 5147739  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  5147740 ccaacccaagtgggtta 5147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 42602669 - 42602554
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||   |||||||||| | ||||||||| ||| | |||||||||||||||||||||  |||| |  |||| ||||||| |||||    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactagg 42602570  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  42602569 ccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 14500391 - 14500277
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| || |||| ||||||||||| ||||||||||||||  |||||||| ||| ||||||||||  |||||| |||||   ||||| ||||||    
T  14500391 aagaagctaaactatccccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggc 14500292  T
Q  198 caacgcaagtgggtt 212  Q
    |||  ||||||||||    
T  14500291 caaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 42327378 - 42327471
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||||| |  |||||||||||| |||||||||||| ||||||||||  |||| |  |||| ||||||| |||||||||| ||||||||||    
T  42327378 caaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 45026856 - 45026787
Alignment:
Q  99 agaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||| |||| ||||||| ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacac 45026787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 4438940 - 4439056
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||  ||||||||| | |||| |||||||||| || ||||||||| ||||||||||   |||||  ||||| ||||||  ||||    
T  4438940 gaagaagctaaactaaccctctcaaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattagg 4439039  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  4439040 ccaacccaagtgggtta 4439056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 2750587 - 2750658
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| ||||||| |||||||||||  |||||||||||||| |||||||||||| | ||||||||    
T  2750587 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgaggaagagcacac 2750658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 19244216 - 19244109
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    ||||||| |||  ||||||||||| ||||||||||||||| |||||||||| | ||||||||||   ||| |  ||||||||||||  ||| ||||| ||    
T  19244216 taaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaaccca 19244117  T
Q  205 agtgggtt 212  Q
    ||||||||    
T  19244116 agtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 30410510 - 30410581
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| ||||||| ||||||||||| |||||| |||||||| |||| ||||||| ||||||||||    
T  30410510 gaagaagctaaactaaccccctcaaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacac 30410581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 16918539 - 16918653
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||| || | |||| ||||| ||||||||||| ||| | |||||||||| ||||||||||  ||||||  |||  ||||||| |||||    
T  16918539 gaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactagg 16918638  T
Q  197 ccaacgcaagtgggt 211  Q
    ||||| |||||||||    
T  16918639 ccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 37755932 - 37756002
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    ||||||| ||||||| |||  ||||||||||||||||| || ||||||||||||||| ||| |||||||||    
T  37755932 gaagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcaca 37756002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 21303955 - 21304023
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||| |||||||||||| |||||||| || ||||||||||||||| ||| ||||| || |||||||    
T  21303955 gaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctgaaaccttcaggaggagca 21304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 25637266 - 25637195
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||||| |||    ||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  25637266 gaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacac 25637195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 14780621 - 14780551
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    ||||||| ||||||| |||  ||||||||||||| | ||| ||||||| ||||||||||| ||||||||||    
T  14780621 gaagaagctaaattagcccactcaaattggcatcggggaggatcgaacctgagaccttgaaaaggagcaca 14780551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 29503349 - 29503271
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| |||||||||||| ||||||||||  |||| |  |||  ||||||| |||||||||| ||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 40791488 - 40791522
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||||||||||||||||    
T  40791488 gagaatcgaacttgagaccttgagaaggagcacac 40791522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 7416075 - 7415998
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgg 209  Q
    ||||||||| ||| ||| ||||||||||||| ||||| | |||||| |||||||||||| ||||  |||| |||||||    
T  7416075 gagagaatcaaacatgaaaccttgagaaggaacacacttacagattacaagtcaataccactagatcaacccaagtgg 7415998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 12994376 - 12994453
Alignment:
Q  136 gaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    ||||||||||||||||||| || ||||||||||  |||| |  |||||||||||| |||| ||||| |||| ||||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtta 12994453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 42860424 - 42860347
Alignment:
Q  136 gaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    |||||||||||||||||| ||| ||||||||||  |||| | ||||||||||| | | |||||||| ||||| |||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtta 42860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 3001467 - 3001383
Alignment:
Q  124 tggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtg 208  Q
    ||||| |||||| |||||||| ||||| ||  || ||||||||||  | |||| ||||||||||||| |||||||||| ||||||    
T  3001467 tggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 11062474 - 11062359
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||| ||| ||||||| ||  |||||||||| ||| |||||||||||| || |||||||  |||  || |||| ||||| | |||||    
T  11062474 gaagaagctaaactaactcct-caaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactagg 11062376  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  11062375 ccaacccaagtgggtta 11062359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 11251179 - 11251087
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||| || ||||||||||| ||| |||||||||||| |||||||||| ||||  |  |||| ||||||| ||| ||||||  |||||||||    
T  11251179 aaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 19322883 - 19322812
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||| ||||| | |||||||||||  |||||||||| |||  ||||||||||  ||||||||||    
T  19322883 gaagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacac 19322812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 26545919 - 26545876
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagat 176  Q
    |||||||| |||||||||||| |||||||||||||| |||||||    
T  26545919 agagaatcaaacttgagacctcgagaaggagcacacttccagat 26545876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 30943180 - 30943134
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||    
T  30943180 aaattggcataagagagaatcaaacttgagaccttgag-aggagcaca 30943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 37480190 - 37480075
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||   |||||||| | | | ||||||||||| |||||||||||| ||||||||||   ||| |  |||| ||||||| | |||    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccagg 37480091  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  37480090 ccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 21195638 - 21195708
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| ||||||| ||| | ||||||| ||  |||| ||||||||| |||||||||||| ||||||||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacac 21195708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 39715070 - 39714992
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| |||||||| ||| ||||||||||  |||| |  |||||||||||| | | |||||| ||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 40755708 - 40755644
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||||| |||| |||||||| ||| ||| |||||||||||||||||| | |||||||||| ||||    
T  40755708 gaagaaggtaaactaacccct-caagttgacatcagagagaatcgaacctaagaccttgaggagga 40755644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 41908621 - 41908670
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||| | | || ||||||||||||||||||||| ||||||||||    
T  41908621 caaattggcaccggggataatcgaacttgagaccttgaggaggagcacac 41908670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 4262298 - 4262334
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacac 4262334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 9318060 - 9318092
Alignment:
Q  121 aattggcatcagagagaatcgaacttgagacct 153  Q
    |||||||||||||||||||||||| ||||||||    
T  9318060 aattggcatcagagagaatcgaacctgagacct 9318092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 32650593 - 32650657
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    ||||||||||||  ||||||||||| ||||| ||||  |||||| |||||||| |||| ||||||    
T  32650593 agagaatcgaacccgagaccttgagcaggagtacactcccagatctcaagtcagtaccactaggc 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 37971987 - 37971939
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| | ||||||||||||| |||||| |||| |||||||||||    
T  37971987 aaattggcaccggagagaatcgaacctgagactttgacaaggagcacac 37971939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 33017328 - 33017213
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| || |||| |||||   | |||    
T  33017328 gaagaagttaaactaacccct-caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaagg 33017230  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  33017229 ccaacccaagtgggtta 33017213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 12988542 - 12988428
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| |||||||||| ||||||| ||||||| ||| |||||||| |||||||||| ||||| || |||| ||||||| |||||    
T  12988542 gaagaagctaaactaacccct-caaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactagg 12988444  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||  ||||||||||    
T  12988443 ccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 18540413 - 18540298
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||||||  ||||||||||| ||||||||||||||| |||||||||||| || || ||||  |||| |  |||| ||||||| |||||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  18540313 ccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 8794307 - 8794419
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||||||||| ||||||| | ||||||||||||||| ||||||| |||| |||||||||| ||||| || |||| ||||||| ||| |    
T  8794307 gaagaagctaaattaacccctt-aaattggtaccagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatg 8794405  T
Q  197 ccaacgcaagtggg 210  Q
    ||||  ||||||||    
T  8794406 ccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 35690048 - 35690129
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaac 201  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||| ||| ||||||  |||| ||||||| ||||||||||    
T  35690048 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 968454 - 968362
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| ||||||||||||| |||||||| ||| ||||||||||  |||| |  |||| ||||||| | |||||||| ||||||||||    
T  968454 aaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 23361633 - 23361727
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    |||||| || |||||||||| |||| |||||||||||| ||||||||||  ||| ||  |||||||||||| | ||| |||| ||||||||||||    
T  23361633 aaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggttaa 23361727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 31408084 - 31408154
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||||||||||| | |||||| ||| |||||||||||||| ||| |||||||| ||||||||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacac 31408154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 1157174 - 1157081
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||||||| | | | |||||||| ||| |||||||| ||||||||||| |  ||||||||||||| | ||| || ||||||||||||    
T  1157174 gaagaagttaaattagctcatccaaattggtatcggagagaattgaacttgagacatcaagaaggagcacactttcaggttccaagtcaatacc 1157081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 11928693 - 11928769
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccag 174  Q
    |||||||||||||||||| | ||||||| |||| |  |||||||||| |||||||| ||| |||||||||| |||||    
T  11928693 aagaagttaaattaacccatccaaattgacatcggtaagaatcgaacctgagacctcgaggaggagcacacttccag 11928769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 6536635 - 6536564
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||||||||||    ||||||||| |||||||||| |||| |||||||||||| ||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacac 6536564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgaga-aggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||| ||||||| ||| | |||||||| | |||||| |||||| | |||||| |||||  ||||||||||  |||| |  |||||||||||| |||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactagg 20994518  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  20994519 ccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 28783175 - 28783060
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||   |||||||||| |   ||||||||||| |||||||||||| ||||||||||  |||| | ||||| ||||||| | | |    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaag 28783076  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  28783075 ccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 30483845 - 30483960
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||  || ||||||||||||  ||||||||| |||| ||||||  |||| ||||||||||  ||| ||  |||| ||||||| || ||    
T  30483845 gaagaagataaattagtccattcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactggg 30483944  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  30483945 ccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 3624660 - 3624582
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtggg 210  Q
    ||||||||||||| |||||||||||  ||||||||||  |||| |  |||| ||||||| |||||||||| ||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 6569733 - 6569847
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||| |||||||| || || |||||||||||| ||| ||||  || ||||||||||  ||||||  |||| ||||| | ||||||    
T  6569733 aagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggc 6569832  T
Q  198 caacgcaagtgggtt 212  Q
    ||||  |||||||||    
T  6569833 caacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 16852418 - 16852340
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| |||||||| ||| ||||||||||  |||| |  |||| ||||||| |||||||||| ||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 19703485 - 19703563
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| |||||||||||| ||||||||||   ||| |  |||| ||||||| |||||||||| ||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 12205938 - 12205994
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  12205938 taaatcaaccccttcaaattggcatcagagataatcaaac-tgagatcttgagaagga 12205994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 12450366 - 12450422
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  12450366 taaatcaaccccttcaaattggcatcagagataatcaaac-tgagatcttgagaagga 12450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 33727835 - 33727951
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| ||||||| ||| | ||||||| ||  |||| ||||||||| |||||||||||| |||||||||| ||||  | ||||  | ||||| |||||     
T  33727835 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactaggg 33727934  T
Q  198 caacgcaagtgggttaa 214  Q
    |||| ||| ||||||||    
T  33727935 caacccaaatgggttaa 33727951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 2203585 - 2203494
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtggg 210  Q
    |||||||||| | | |||||| || | |||||||||||| ||||||||||  |||| |  |||| ||||||| |||||||||| ||||||||    
T  2203585 caaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 13129775 - 13129716
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagc 164  Q
    |||||||| || | |||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  13129775 taaattaatccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagc 13129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 3305172 - 3305218
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcac 166  Q
    ||||||||| |||||| ||||||| ||||||||||||| ||||||||    
T  3305172 aaattggcaccagagataatcgaatttgagaccttgaggaggagcac 3305218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 6436517 - 6436587
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||| | | ||||||||  |||||| ||||||||  |||||||||| | ||||||||||    
T  6436517 aagaagttaaattaactcatccaaattggtttcagagggaatcgaatctgagaccttgcggaggagcacac 6436587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 8059726 - 8059632
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||| |||||| |||||| |||| |||||||||||| |||| |||||   || ||  ||||||||||||   |||||||| ||||||||||    
T  8059726 tcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 24675474 - 24675544
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||||   | | ||||||  ||||||||| |||||||  |||||||||||||||||||||||    
T  24675474 aagaagttaaattagttcatccaaattaacatcagagaaaatcgaatctgagaccttgagaaggagcacac 24675544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 35287809 - 35287715
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    |||||||||| | ||||||||||||| ||| |||||||| ||||||||||  | | || ||||| ||| ||| | ||||| || |||||||||||    
T  35287809 caaattggcaccggagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtta 35287715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 11492070 - 11492127
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    |||||||||||| | |||||| ||||||||||||||  |||||| ||||| |||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatacc 11492127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 11942864 - 11942932
Alignment:
Q  121 aattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||||||||||||||| |||| ||||||||| || | |||||||  ||||||| ||||| |||||||    
T  11942864 aattggcatcagagagaattgaac-tgagaccttaaggaagagcacatttccagatctcaagccaatacc 11942932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 18386422 - 18386462
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaag 160  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  18386422 aaattggcatcagtgagaatcaaatttgagaccttgagaag 18386462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 18897258 - 18897210
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| |||  |||||||||| |||||||||||| ||||||||||    
T  18897258 aaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacac 18897210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 36627501 - 36627573
Alignment:
Q  101 aagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatcca 173  Q
    |||||||| |||||||||||||||| ||| | |||||||  ||| ||||| |||||  |||||||||| ||||    
T  36627501 aagttaaactaaccccttcaaattgacattaaagagaattaaacatgagatcttgaagaggagcacacttcca 36627573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 12188264 - 12188379
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| |||||||||||  |||||||||||||||||| |||||||| ||||||||||  |||| |  |||| ||||||| |||||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactagg 12188363  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  12188364 ccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 11306135 - 11306194
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttga 156  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  11306135 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttga 11306194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 32613137 - 32613214
Alignment:
Q  133 agagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtggg 210  Q
    |||||||||||| ||||| |||||||||||||||||  |||||   |||||||||||| | |||||||| ||||||||    
T  32613137 agagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 33549196 - 33549104
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| ||||||||||||| |||||||| ||| ||||||||||  |||| |  |||| ||||||| | || ||||| ||||||||||    
T  33549196 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 3779454 - 3779339
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||||||||||| ||  |  |||||| |||||||| |||| |||  |||||||||||||||||||||||  |||  | ||||| ||||||| |||||    
T  3779454 gaagaagttaaattatcctatcaaaattgacatcagagggaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaataccactagg 3779355  T
Q  197 ccaacgcaagtgggtt 212  Q
     ||||  |||||||||    
T  3779354 tcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 7320764 - 7320834
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| ||||||||||| |||||||||||| || ||||||||| || ||||||||| || ||||||||||    
T  7320764 gaagaagctaaattaacccattcaaattggcaccatagagaatcg-acctgagaccttcaggaggagcacac 7320834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 13330201 - 13330087
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||||  |||||||||||  |||||||||||||  |||||||||||| ||||||  ||  |||  ||  ||||||||||| |||||     
T  13330201 aagaagctaaactaaccctctcaaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggt 13330102  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  13330101 caacccaagtgggtt 13330087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 15951264 - 15951334
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||| ||||||  ||||||||| | |||||||||| |||| |||||||||||| ||||||||||    
T  15951264 aagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacac 15951334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 10650001 - 10650074
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatc 171  Q
    |||||||||||||| ||| |||||  ||||| | ||||||||| ||| |||||||||||  |||||||||||||    
T  10650001 aagaagttaaattagcccgttcaagctggcaccggagagaatcaaacctgagaccttgaagaggagcacacatc 10650074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 24256806 - 24256851
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||| || |||||||||||||||||||||||||||||| |||||    
T  24256806 aaattgacaccagagagaatcgaacttgagaccttgagaatgagca 24256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 9583457 - 9583410
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  9583457 aaattggcaccagagagaatcgaactggagaccttgag-aggagcacac 9583410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 12234503 - 12234583
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||||| |||||||| |||| |||||||||  |||| |  |||||||||||| | ||||||||  |||||||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 23910074 - 23910143
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| |||| ||||||| ||||||||||| ||||||   |||||| |||||||||||| ||||||||||    
T  23910074 gaagaagctaaactaaccccctcaaattggcaccagagat--tcgaacctgagaccttgaggaggagcacac 23910143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 28841494 - 28841458
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28841494 gagagaatcgaacttgagaccttgaggaggagcacac 28841458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 28364052 - 28363981
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||||||| ||| | ||||||| || |||||| |||||||  |||||||||||| ||||||||||    
T  28364052 gaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacac 28363981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 3715532 - 3715450
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    |||||||||||||||||||||| ||  || |||| ||  |||||| ||||||||||||| |||| |||||  || ||||||||    
T  3715532 gagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcccaaccaaaatgggttaa 3715450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 6776601 - 6776679
Alignment:
Q  130 cagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtg 208  Q
    ||||||||||| |||||||||| | ||| ||||||||||  ||||||  |||| ||||||| | |||||||| ||||||    
T  6776601 cagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 28028621 - 28028583
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgaga 158  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  28028621 aaattggcatcagggagaatcgaacatgagaccttgaga 28028583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 13227154 - 13227235
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    |||||||||||||||||||| | ||| ||||||||||  |||||| |||   ||||||| |  ||||||| |||||||||||    
T  13227154 gagagaatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtta 13227235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 20863468 - 20863419
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||| |||||||||| ||  |||||||||||| ||||||||||    
T  20863468 caaattggcattagagagaatcaaatctgagaccttgaggaggagcacac 20863419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 34786450 - 34786507
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatac 189  Q
    |||||||||||||||||||| | ||||||||||||||  ||||||  |||| ||||||    
T  34786450 gagagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 2092495 - 2092563
Alignment:
Q  100 gaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||||||| |||||||   | |||||| |||| || ||||||||||||| ||||||||||    
T  2092495 gaagttaaactaaccccctcaaattaataccagagaaaatcaaatttgagaccttgagcaggagcacac 2092563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 2616556 - 2616476
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||| |||||||||||||||||  |||||||||| ||||    |||||  |||||| |||||||||| ||| ||||||    
T  2616556 gagagaaacgaacttgagaccttgaagaggagcacacttccatgactcaagctaataccactaggccaacccaaatgggtt 2616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 3907625 - 3907578
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||||||||||||||||||| | |||||| ||||||||||    
T  3907625 aaattggcaccagagagaatcgaacttgaaatcttgag-aggagcacac 3907578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 6691535 - 6691582
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| | ||||||||||||| |||||||||||| ||||||||||    
T  6691535 aaattggcaccggagagaatcgaacctgagaccttgag-aggagcacac 6691582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 19637968 - 19638080
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaa-----tcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggcca 199  Q
    |||| ||||||| ||||||||||| |||||||||     || ||| ||||||||||||  |||||||||  |||| || || | ||||||| || | |||    
T  19637968 taaactaaccccctcaaattggcaccagagagaagagaatcaaacctgagaccttgagctggagcacactcccaggttccacgccaataccactggacca 19638067  T
Q  200 acgcaagtgggtt 212  Q
    |||||||||||||    
T  19638068 acgcaagtgggtt 19638080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 25627171 - 25627053
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| ||||||| || ||||||||||||||| |||||||||||| ||||||||||  |||  || |||| ||||||| |||||    
T  25627171 gaagaagctaaactaacccct-caaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactagg 25627073  T
Q  197 ccaacgcaagtgggttaagt 216  Q
    ||||| ||||||||||||||    
T  25627072 ccaacccaagtgggttaagt 25627053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 14285263 - 14285161
Alignment:
Q  110 taaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgg 209  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||  |||| || |||| |||| || || ||||||| |||||||    
T  14285263 taaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgg 14285164  T
Q  210 gtt 212  Q
    |||    
T  14285163 gtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 34984907 - 34984806
Alignment:
Q  111 aaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtggg 210  Q
    |||||| ||||||||||| ||||||||||||||| | |||||||||| ||||||||||  |||| || |||| ||||||| |||| ||||| ||||||||    
T  34984907 aaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtggg 34984808  T
Q  211 tt 212  Q
    ||    
T  34984807 tt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 7918430 - 7918546
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||| ||| ||||||||||| ||||||||||||||| | |||||||||| |||||  |||  |||| || |||| ||||||| |||||    
T  7918430 gaagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 7918529  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  7918530 ccaacccaagtgggtta 7918546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 29075896 - 29075779
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| ||| |  ||||||||| ||||||||||||||| ||||| || ||| ||||||||||  ||||||  |||| ||||||| |||||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactagg 29075797  T
Q  197 ccaacgcaagtgggttaa 214  Q
    | ||| ||||||||||||    
T  29075796 caaacccaagtgggttaa 29075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 16773899 - 16773807
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||  |||| |  |||||||||||| | || ||||| ||||||||||    
T  16773899 aaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 21549099 - 21549213
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| ||||||||||  ||||| ||||||||||||||| || || ||||||||||  |||| |  |||| ||||||| |||||    
T  21549099 gaagaagctaaactaacccct-caaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactagg 21549197  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  21549198 ccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 25979284 - 25979214
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||||||||||| |||||||| ||| |||||||||||||| |||||||||||| ||||| ||||    
T  25979284 aagaagctaaattaaccccatcaaattgacataagagagaatcgaacctgagaccttgaggaggagaacac 25979214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 19043572 - 19043457
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||||| ||||||||||  |||||| || |||| |||||| |||||||||| |||||  |||  || |||||||||| | |||||    
T  19043572 gaagaagctaaactaacccct-caaattggcactagagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactagg 19043474  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| |||||||||||    
T  19043473 ccaacccaagtgggtta 19043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 43442303 - 43442207
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaac 201  Q
    ||||||| ||| | ||||||| || ||||||||||||||| |||||||||||| ||||||||||  |||||| ||||  ||||||| ||| ||||||    
T  43442303 taaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 3252274 - 3252368
Alignment:
Q  121 aattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaag 215  Q
    |||||||||||||||||||||||| ||||| | |||| | |||  |||  |||  | ||||||||||||| |||||||||| |||||||||||||    
T  3252274 aattggcatcagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccactaggccaacccaagtgggttaag 3252368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 37258328 - 37258398
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| |||| ||||||| |||||||| || ||||||||||||||| ||| |||||||| ||||||||||    
T  37258328 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacac 37258398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 17155937 - 17155868
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcac 166  Q
    ||||||||||||||| |||  ||||||||||| || |||||||| ||| |||||||||||| ||||||||    
T  17155937 gaagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggaggagcac 17155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 87423 - 87499
Alignment:
Q  136 gaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||| ||| |||||||||||| ||||||||||  ||||||| |||| ||||||| ||||||||||  |||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 30000231 - 30000175
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagacct 153  Q
    |||||||||||||||||||  | |||||||||||||||||| |||||| ||||||||    
T  30000231 gaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacct 30000175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 16638930 - 16638871
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttga 156  Q
    |||||||||||||||||||  ||||||||| || |||||||||||||| ||||| |||||    
T  16638930 gaagaagttaaattaaccctctcaaattggtataagagagaatcgaacatgagatcttga 16638871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 30700580 - 30700692
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    ||||||||||| |||||||||  ||||| || |||||| ||| |||| ||||||||| ||||||||||| |   ||| || |||||||||||  ||||||    
T  30700580 aagaagttaaactaacccctttcaattgacaccagagataattgaacctgagaccttaagaaggagcactc--tcaggttacaagtcaatacgactaggc 30700677  T
Q  198 caacgcaagtgggtt 212  Q
    ||||  |||||||||    
T  30700678 caacctaagtgggtt 30700692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 11375157 - 11375227
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||| ||||||||| | | ||||||| |||| |||||||||||||||||||| ||||| |||| |||||    
T  11375157 aagaagataaattaactcatccaaattgacatcggagagaatcgaacttgagacattgaggaggaacacac 11375227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 14495789 - 14495883
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    ||||||||||| ||||||||| ||  |||||||| ||| ||||||||||  ||||||  |||||||||||| | || ||||| ||| ||||||||    
T  14495789 aaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggttaa 14495883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 18595970 - 18596032
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    |||| ||||||| ||||||||||| |||||| |||||||| | |||||||||| |||||||||    
T  18595970 taaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcaca 18596032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 30883196 - 30883274
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||| ||||||||||||||||| ||||||||||  |||| |  |||| ||||||| |||| ||||| ||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 2269185 - 2269250
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    ||||||| |||| ||||||| ||||||||  |||||||| ||||||| ||||||||||||| ||||    
T  2269185 gaagaagctaaaataaccccctcaaattgttatcagagataatcgaatttgagaccttgaggagga 2269250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 5156094 - 5156157
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||  |||||||| || ||||||||||||||  ||||||||| ||||| |||||||    
T  5156094 taaattaaccctctcaaattgacaccagagagaatcgaatctgagaccttcagaagaagcacac 5156157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 26078024 - 26078071
Alignment:
Q  109 ttaaccccttcaaattggcatcagagagaatcgaacttgagaccttga 156  Q
    |||||||| |||||||||||  |||||||||||||| |||||||||||    
T  26078024 ttaaccccctcaaattggcactagagagaatcgaacctgagaccttga 26078071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 30735029 - 30735146
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggag---cacacatccagatttcaagtcaataccccta 194  Q
    |||||| |||| ||||||| |||||||| ||||||||  ||||||||||||||  ||||| |||||   |||||   ||| || |||||||||||  |||    
T  30735029 aagaagctaaactaaccccctcaaattgacatcagaggtaatcgaacttgagattttgaggaggaggagcacactctcaggttacaagtcaatacgacta 30735128  T
Q  195 ggccaacgcaagtgggtt 212  Q
    || |||| ||||||||||    
T  30735129 ggtcaacccaagtgggtt 30735146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 84902 - 84868
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||||| ||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacac 84868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 6844821 - 6844727
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    |||||||||  ||||| |||||||| | |||||| ||| |||| |||||  ||| ||| |||||||||||| |  ||||||| ||||||||||||    
T  6844821 aaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggttaa 6844727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 12669564 - 12669498
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaa 186  Q
    |||||| || ||||||||||||||||||| ||||| ||||| ||||||  || ||||| ||||||||    
T  12669564 aaattgacaccagagagaatcgaacttgaaaccttaagaagaagcacatttcaagattccaagtcaa 12669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 18974067 - 18974005
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    |||| ||||||  ||||||||||| ||| ||||||||||| ||| |||||||| |||||||||    
T  18974067 taaactaacccactcaaattggcaccagggagaatcgaacctgacaccttgaggaggagcaca 18974005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 6629892 - 6629925
Alignment:
Q  127 catcagagagaatcgaacttgagaccttgagaag 160  Q
    ||||||||| ||||||||||||||||||||||||    
T  6629892 catcagagataatcgaacttgagaccttgagaag 6629925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 27123893 - 27123929
Alignment:
Q  137 aatcgaacttgagaccttgagaaggagcacacatcca 173  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  27123893 aatcgaacttgagacctcgagaaggagtacacatcca 27123929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 31074324 - 31074276
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||||||||||||||| ||||| |||||| |||| |||||    
T  31074324 aaattggcaccagagagaatcgaacctgagatcttgaggaggaacacac 31074276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 46518743 - 46518628
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||| ||| ||| |||||||| ||||||||||  ||||||  |||| ||||||| ||| |    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatg 46518644  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  46518643 ccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 37788428 - 37788541
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| ||||||||||||| ||||||||||  |||||||||||||| |||||||||||| ||||||||||  | || || |||||||||||| || |||    
T  37788428 aagaagctaaattaacccct-caaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggc 37788526  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  37788527 caacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 27093323 - 27093437
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| |||||| |||||||||||| ||||||||||| ||| |||||||||||| ||||||||||  |||  || |||| ||||||| |||||    
T  27093323 gaagaagataaactaaccc-ttcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactagg 27093421  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  27093422 ccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 30311421 - 30311306
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||| ||||||| ||||||||||| || |||||||||||| |||||||||||| ||||||||||  ||||||  |||| | ||||| |||||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactagg 30311322  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| || |||||||    
T  30311321 ccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 53413052 - 53412948
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgca 204  Q
    |||| ||||||| ||||||||||| |||||||||| |||| |||||||||||| ||||||||||  |||| || |||| ||||||| |||| ||||| ||    
T  53413052 taaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaaccca 53412953  T
Q  205 agtgg 209  Q
    |||||    
T  53412952 agtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 15048023 - 15048137
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    ||||||||||| ||||||| ||||||||||| |||||| |||||||| |||||||||||| |||||||||   ||||||  |||| | |||||  || ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  198 caacgcaagtgggtt 212  Q
    |||| ||||||||||    
T  15048123 caacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 34062509 - 34062626
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaag--gagcacacatccagatttcaagtcaataccccta 194  Q
    |||||||||||| ||||  | ||||||||||| |||||||||| |||| |||||||||||| ||  ||||||||  ||| |||||||| ||||| | ||     
T  34062509 gaagaagttaaactaacatcctcaaattggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactg 34062608  T
Q  195 ggccaacgcaagtgggtt 212  Q
    ||||||| ||||||||||    
T  34062609 ggccaacccaagtgggtt 34062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 14186727 - 14186647
Alignment:
Q  132 gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    ||||||||||||| |||||||||||| |||||||||| ||||| |  |||| ||||||| |||||||||| |||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacac-tccaggtcccaagacaataccactaggccaacccaagtgggtta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 16354879 - 16354968
Alignment:
Q  123 ttggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||| ||||||||||||||| ||||||| |||| ||||||||||   ||| || |||| ||||||| |||||||||| ||||||||||    
T  16354879 ttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 8170787 - 8170671
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    |||||| |||||||| |||   ||||||| || |||||  |||||||| |||||||||||| ||||||||||  |||  ||||||| ||||||| |||||    
T  8170787 gaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactagg 8170688  T
Q  197 ccaacgcaagtgggtta 213  Q
    ||||| ||| |||||||    
T  8170687 ccaacccaaatgggtta 8170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 8796075 - 8796122
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8796075 tcaaattagcatcagagagaatcgaacttgagaccttgaggaggagca 8796122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 28703366 - 28703481
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| |||| ||||| | ||||||||||| ||||||||||||||| |||||||||||  ||||||||||  ||||||  ||||  |||| | || | |    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggac 28703465  T
Q  198 caacgcaagtgggtta 213  Q
    |||| |||||||||||    
T  28703466 caacccaagtgggtta 28703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 49494132 - 49494223
Alignment:
Q  122 attggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtta 213  Q
    ||||||||||| ||||||| ||| |||||||| ||| | ||||||||  ||| |||||||||||||||| |||||| ||| |||||| ||||    
T  49494132 attggcatcagggagaatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagtta 49494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 10445100 - 10445217
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaa-tacccctag 195  Q
    ||||||| ||||||| |||  ||||||| ||| ||||||||||||||| |||||||| ||| ||||||||||  |||| |  |||| ||| | || ||||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactag 10445199  T
Q  196 gccaacgcaagtgggtta 213  Q
    |||||| |||||||||||    
T  10445200 gccaacccaagtgggtta 10445217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 4222233 - 4222141
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||| || ||||||||||||||| | |||| ||||| ||||||||||  ||||||  |||| ||||||| ||| |||||| ||||||||||    
T  4222233 aaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 8368797 - 8368875
Alignment:
Q  134 gagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||| ||| |||||||| ||| | ||||||||  |||| ||||||||||||||| |||||||||| ||| ||||||    
T  8368797 gagaatcaaacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggtt 8368875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 10969878 - 10969936
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttg 155  Q
    ||||||| |||| ||||||| | ||||||||| ||||||||||||||| ||||||||||    
T  10969878 gaagaagctaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttg 10969936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 26673328 - 26673282
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaac 144  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||    
T  26673328 aagaagttaaattaacccactcaaattggcatcagagagaattgaac 26673282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 39253787 - 39253741
Alignment:
Q  122 attggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||    
T  39253787 attggcatcagagagaatcgaacctgagaccttgaagaggagcacac 39253741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 4844472 - 4844565
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||| ||||||| |||   |||||||||| | ||||||||||| | |||||||| ||| ||||||||||  ||||||  ||||||||||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatacc 4844565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 4870168 - 4870261
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||| ||||||| |||   |||||||||| | ||||||||||| | |||||||| ||| ||||||||||  ||||||  ||||||||||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatacc 4870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 5499391 - 5499483
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||| | | |||||| |||| | ||||||| || ||||||||||   ||||| ||||||||||||| | |||||||| ||||||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 36010830 - 36010786
Alignment:
Q  124 tggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||    
T  36010830 tggcaccagagagaatcgaacttgagactttgaggaggagcacac 36010786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 3427535 - 3427594
Alignment:
Q  118 tcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatt 177  Q
    |||||||||||  |||||||||||||  |||||||||||| ||||||||||  |||||||    
T  3427535 tcaaattggcactagagagaatcgaatctgagaccttgaggaggagcacactcccagatt 3427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 10499070 - 10499185
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| ||||||| |||   ||||||| |||| ||||||||||||| ||||||||  || | ||||| ||  ||||||  |||| ||||||| | |||    
T  10499070 gaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccagg 10499169  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  10499170 ccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 10828707 - 10828762
Alignment:
Q  110 taaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    ||||||| |||||||||||||| ||| |||||||| ||||||||| || |||||||    
T  10828707 taaccccctcaaattggcatcatagataatcgaacctgagaccttaagtaggagca 10828762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 20501810 - 20501740
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| ||||||| ||||| ||||||||||   ||||||||||||| ||||||||| || ||||||||||    
T  20501810 gaagaagctaaattagcccct-caaattggcactggagagaatcgaacctgagaccttaaggaggagcacac 20501740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 27259276 - 27259205
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||  ||| ||||||| |||||||| |||||||||||||| ||| ||| |||| ||| ||||||||||    
T  27259276 gaagaagcaaaactaaccccctcaaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacac 27259205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 29563985 - 29563922
Alignment:
Q  127 catcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    |||||||||||||||||| |||||| | ||| || ||||||| ||||||| ||||| |||||||    
T  29563985 catcagagagaatcgaacctgagacttcgaggagaagcacacttccagatctcaagccaatacc 29563922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 40063720 - 40063617
Alignment:
Q  111 aaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtggg 210  Q
    |||||| |||||||||||   ||||||||||||||||||||||| || ||||||| ||   |||||  |||| ||||||  ||| | |||| ||||||||    
T  40063720 aaccccctcaaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtggg 40063621  T
Q  211 ttaa 214  Q
    ||||    
T  40063620 ttaa 40063617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 47454601 - 47454692
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggt 211  Q
    ||||||||||  | ||||||||||| |||||||| ||| ||||||||||  | |||| ||||| ||||||| ||||  |||| |||||||||    
T  47454601 aaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 2709470 - 2709388
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaac 201  Q
    |||||||||||||||||||||| ||| | | |||| ||| ||||||| || |||||||  |||  ||||||| ||||||||||    
T  2709470 caaattggcatcagagagaatcaaacctaaaacctcgaggaggagcatacttccagatcccaacacaataccactaggccaac 2709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 39976433 - 39976463
Alignment:
Q  138 atcgaacttgagaccttgagaaggagcacac 168  Q
    |||||||||||||||||||||||||||||||    
T  39976433 atcgaacttgagaccttgagaaggagcacac 39976463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 19154724 - 19154675
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||| ||||| |||||||||||| ||||||||| || ||||||||||    
T  19154724 caaattgacatcaaagagaatcgaacctgagacctttaggaggagcacac 19154675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 39041965 - 39041998
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagacct 153  Q
    ||||||||| ||||||||||||||||||||||||    
T  39041965 aaattggcaccagagagaatcgaacttgagacct 39041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 51903839 - 51903932
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||| ||||||| |||  |||||||| || | ||||||||||||| |||||||  ||| ||||||||||  ||||||  |||| |||||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatacc 51903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 4252509 - 4252556
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  4252509 aaattggcaccagagggaatcaaacttgagaccttgag-aggagcacac 4252556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 7902678 - 7902742
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaagga 162  Q
    |||||| |||||| || | ||||||||| || | ||||||||| ||| |||||||||||||||||    
T  7902678 aagaagctaaatttactcattcaaattgacacctgagagaatcaaacatgagaccttgagaagga 7902742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 8051306 - 8051214
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||| | ||| |||||||||||||||||| ||| || |||| ||  |||| |  |||| ||||||| | |||||||| ||||||||||    
T  8051306 aaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 42482 - 42596
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||| |||||||||||||| ||||||||| || |||||||||||| ||||||  |||| ||||||| ||  ||||||| |||||||||||| |||||    
T  42482 gaagaagctaaattaacccctt-aaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactagg 42580  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||| ||||||    
T  42581 ccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 81526 - 81605
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatt 177  Q
    ||||||||||| |||| || ||||||||||||||| ||||||||||  |||||||||||| |||||||||| ||||||||    
T  81526 aagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagatt 81605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 35351 - 35467
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggc 197  Q
    |||||| ||||  |||||| |||||||||||||||||| |||||||||| |||||||||| ||||||| ||  | ||||| |||| ||||||| || |||    
T  35351 aagaagctaaaccaaccccctcaaattggcatcagagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaataccactgggc 35450  T
Q  198 caacgcaagtgggttaa 214  Q
     |||  |||||||||||    
T  35451 aaaccgaagtgggttaa 35467  T

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Target: scaffold0238 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 2673 - 2740
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagca 165  Q
    |||||| ||||||| || ||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  2673 aagaagctaaattagcctcttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagca 2740  T

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Target: scaffold0118 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 41616 - 41711
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggttaa 214  Q
    ||||||| ||||||||||||| |||| |||||||| ||| ||||||| ||   ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  41616 caaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggttaa 41711  T

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Target: scaffold0187 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 12383 - 12500
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatca-gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||||||| || ||| |  |||||||||||| | ||||||||||||||| || ||||| |||| ||||| | ||| ||||||||||||||| | |||    
T  12383 aagaagttaaactagcccatctaaattggcatcaagggagaatcgaacttgaaactttgaggaggatcacactttcaggtttcaagtcaataccaccagg 12482  T
Q  197 ccaacgcaagtgggttaa 214  Q
    ||||| ||| ||||||||    
T  12483 ccaacccaaatgggttaa 12500  T

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Target: scaffold0187; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 22711 - 22828
Alignment:
Q  98 aagaagttaaattaaccccttcaaattggcatca-gagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||||||| || ||| |  |||||||||||| | ||||||||||||||| || ||||| |||| ||||| | ||| ||||||||||||||| | |||    
T  22711 aagaagttaaactagcccatctaaattggcatcaagggagaatcgaacttgaaactttgaggaggatcacactttcaggtttcaagtcaataccaccagg 22810  T
Q  197 ccaacgcaagtgggttaa 214  Q
    ||||| ||| ||||||||    
T  22811 ccaacccaaatgggttaa 22828  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 94955 - 95044
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgg 209  Q
    ||||||||| |||||| ||| |||| |||||||||||| ||||||||||  |||| || |||| ||||||| |||||||||| |||||||    
T  94955 aaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0194 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 13029 - 13100
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacc 190  Q
    ||||||| |||| ||||||||||||| |||||||||||| ||||||||||  |||||| ||||| |||||||    
T  13029 caaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaatacc 13100  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 15307 - 15399
Alignment:
Q  120 aaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    ||||||||||| ||||||||||||| |||||||| ||| ||||||||||  |||| |  |||| ||||||| | || ||||| ||||||||||    
T  15307 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

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Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 19932 - 20027
Alignment:
Q  105 taaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaac 201  Q
    |||| |||||||| ||||||  || ||||||||||||||| |||||||||||| ||||||| ||  |||| || |||| ||||||| ||||||||||    
T  19932 taaactaacccct-caaattaacaccagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

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Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctagg 196  Q
    ||||||||||||||| |||  |||||||||||||||||| |||||||| ||| || | ||  ||||||||||  | |  |  ||||||||||||  ||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  197 ccaacgcaagtgggtt 212  Q
    ||||| ||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

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Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 25328 - 25379
Alignment:
Q  117 ttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcacac 168  Q
    ||||||||| || |||||| |||||||| |||||||||||||||||||||||    
T  25328 ttcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacac 25379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 7709 - 7802
Alignment:
Q  119 caaattggcatcagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggccaacgcaagtgggtt 212  Q
    |||||||||| | || |||||||||||||||||||| || |||||||||| | ||| | ||||| ||||||| | || ||||| ||||| ||||    
T  7709 caaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 18413 - 18344
Alignment:
Q  97 gaagaagttaaattaaccccttcaaattggcatcagagagaatcgaacttgagaccttgagaaggagcaca 167  Q
    ||||||| ||||||| || || |||||||||| ||||||||||| ||| ||| |||||||| |||||||||    
T  18413 gaagaagctaaattagccact-caaattggcaccagagagaatcaaacctgaaaccttgaggaggagcaca 18344  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 11610 - 11541
Alignment:
Q  130 cagagagaatcgaacttgagaccttgagaaggagcacacatccagatttcaagtcaatacccctaggcca 199  Q
    ||||||||||||||| |||||||| ||| ||||||||||  ||||||  |||| ||||||| | ||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggcca 11541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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