View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7891_low_9 (Length: 210)
Name: NF7891_low_9
Description: NF7891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7891_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 30470271 - 30470450
Alignment:
| Q |
14 |
ttatacttgtagaaatcaatttcctgcactttgaagttatcagagaagattcttcgatgttgtatcgttataatatcttttcttaattaaaacctttttt |
113 |
Q |
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| T |
30470271 |
ttatacttgtagaaatcaatttcctgcactttgaagttatcagagaagattcttcgatgttgtatcgttataatatcttttcttaattaaaacctttttt |
30470370 |
T |
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| Q |
114 |
caaatcataccaaataatattatttaaattgaaagtgacatgaagtcctaaattgtgtgtctttctgacagatcagttat |
193 |
Q |
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| T |
30470371 |
caaatcataccaaataatattatttaaattgaaagtgacatgaagtcctaaattgtgtgtctttctgacagatcagttat |
30470450 |
T |
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