View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7894_high_37 (Length: 262)
Name: NF7894_high_37
Description: NF7894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7894_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 17082133 - 17081898
Alignment:
| Q |
15 |
cagttatgcacacttgtagtcagttttagctgnnnnnnngttgtcaaaaacacttgaaatttgcagttagacttgtatatgcacctagcattaaatgatt |
114 |
Q |
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| T |
17082133 |
cagttatgcacacttgcagtcatttttagctgaaacaaagttgtcaaaaacacttgaaatttgcagttagacttgtatatgcacctagcattaaatgatt |
17082034 |
T |
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| Q |
115 |
taaatccacaagttatgatcacaaaaagctgtctaaaaaccatttatctgatgaaacataaatttaaagttcatcatcttgttcaatcacatgttgggca |
214 |
Q |
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| T |
17082033 |
taaatccacaagttatgatcacaaaaagctgtctaaaaaccatttatctgatg-aacataaatttaaagttcatcatcttgttcaatcacatgttgggca |
17081935 |
T |
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| Q |
215 |
ccttaatacaatcattgaagttactacttgacttctt |
251 |
Q |
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| T |
17081934 |
ccttaatacaatcattgaagttactacttgagttctt |
17081898 |
T |
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