View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7894_low_17 (Length: 448)

Name: NF7894_low_17
Description: NF7894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7894_low_17
NF7894_low_17
[»] chr1 (43 HSPs)
chr1 (17-405)||(6537661-6538049)
chr1 (309-405)||(5428532-5428628)
chr1 (309-405)||(42492171-42492267)
chr1 (309-405)||(51113910-51114006)
chr1 (309-405)||(318559-318655)
chr1 (309-405)||(27296166-27296262)
chr1 (309-405)||(27296341-27296437)
chr1 (309-405)||(38684019-38684115)
chr1 (309-405)||(42496939-42497035)
chr1 (309-405)||(42497297-42497393)
chr1 (309-405)||(44262668-44262764)
chr1 (309-405)||(44263093-44263189)
chr1 (309-405)||(51114094-51114190)
chr1 (309-404)||(51272499-51272594)
chr1 (311-405)||(21617762-21617856)
chr1 (309-405)||(1156071-1156167)
chr1 (309-405)||(3227229-3227324)
chr1 (309-405)||(16165692-16165788)
chr1 (309-395)||(33375634-33375720)
chr1 (309-405)||(1647547-1647643)
chr1 (309-405)||(5428937-5429033)
chr1 (19-123)||(12625816-12625920)
chr1 (309-405)||(28950176-28950272)
chr1 (309-405)||(51113727-51113823)
chr1 (309-404)||(44263314-44263409)
chr1 (309-395)||(42497484-42497570)
chr1 (353-405)||(5429100-5429152)
chr1 (309-382)||(28950016-28950089)
chr1 (309-393)||(28950277-28950361)
chr1 (19-78)||(36385369-36385428)
chr1 (309-405)||(52740704-52740800)
chr1 (17-78)||(6015461-6015522)
chr1 (309-405)||(18912219-18912316)
chr1 (354-393)||(44099688-44099727)
chr1 (356-395)||(45417616-45417655)
chr1 (309-376)||(6537465-6537532)
chr1 (355-393)||(24595278-24595316)
chr1 (309-405)||(18912331-18912428)
chr1 (309-341)||(52740919-52740951)
chr1 (359-405)||(12115359-12115405)
chr1 (353-395)||(28949908-28949950)
chr1 (309-341)||(45417709-45417741)
chr1 (309-341)||(47790700-47790732)
[»] chr7 (50 HSPs)
chr7 (309-405)||(11650013-11650109)
chr7 (309-405)||(23591419-23591515)
chr7 (309-405)||(4680901-4680997)
chr7 (309-399)||(9142144-9142234)
chr7 (309-405)||(18486638-18486734)
chr7 (309-405)||(48640806-48640902)
chr7 (315-405)||(16671615-16671705)
chr7 (315-405)||(17645983-17646073)
chr7 (17-136)||(22556691-22556812)
chr7 (309-405)||(2354670-2354766)
chr7 (309-405)||(9141966-9142062)
chr7 (309-405)||(12140866-12140962)
chr7 (309-405)||(16492550-16492645)
chr7 (309-405)||(22324288-22324384)
chr7 (309-405)||(27716314-27716410)
chr7 (309-405)||(27716536-27716632)
chr7 (309-401)||(35124729-35124821)
chr7 (309-394)||(2526969-2527055)
chr7 (309-395)||(11645946-11646032)
chr7 (309-403)||(11646404-11646498)
chr7 (309-395)||(21224142-21224228)
chr7 (309-405)||(34837191-34837288)
chr7 (309-405)||(45419641-45419737)
chr7 (309-388)||(32278158-32278237)
chr7 (309-405)||(34837446-34837541)
chr7 (309-395)||(40450116-40450202)
chr7 (353-405)||(18487199-18487251)
chr7 (309-405)||(19222109-19222206)
chr7 (357-405)||(23591636-23591684)
chr7 (353-405)||(30991508-30991560)
chr7 (353-405)||(45419847-45419899)
chr7 (309-390)||(48641036-48641117)
chr7 (309-401)||(11646218-11646310)
chr7 (309-405)||(16671250-16671346)
chr7 (309-405)||(17645618-17645714)
chr7 (354-405)||(43059240-43059291)
chr7 (309-405)||(22773916-22774011)
chr7 (309-383)||(11646631-11646705)
chr7 (356-405)||(46264288-46264337)
chr7 (353-405)||(4681150-4681202)
chr7 (358-405)||(1566513-1566560)
chr7 (309-401)||(21128044-21128136)
chr7 (359-405)||(40686897-40686943)
chr7 (355-405)||(48641447-48641497)
chr7 (365-405)||(2853222-2853262)
chr7 (309-341)||(34837392-34837424)
chr7 (18-124)||(31055358-31055465)
chr7 (364-405)||(4681603-4681644)
chr7 (309-341)||(4455371-4455403)
chr7 (309-345)||(4681659-4681695)
[»] chr8 (41 HSPs)
chr8 (309-405)||(23828133-23828229)
chr8 (309-405)||(23085864-23085960)
chr8 (309-405)||(27853676-27853772)
chr8 (309-405)||(1197882-1197978)
chr8 (17-183)||(27085270-27085439)
chr8 (309-405)||(39922094-39922190)
chr8 (309-405)||(23838348-23838445)
chr8 (309-405)||(35617685-35617782)
chr8 (309-405)||(23830951-23831047)
chr8 (309-405)||(37198304-37198400)
chr8 (309-405)||(37410078-37410174)
chr8 (313-405)||(3459141-3459233)
chr8 (309-405)||(23960588-23960683)
chr8 (309-405)||(29580044-29580140)
chr8 (353-405)||(32062865-32062917)
chr8 (353-405)||(38111392-38111444)
chr8 (309-405)||(33198837-33198933)
chr8 (309-405)||(44429054-44429150)
chr8 (17-123)||(1839810-1839917)
chr8 (313-405)||(23960806-23960897)
chr8 (355-405)||(37426166-37426216)
chr8 (312-393)||(37198131-37198213)
chr8 (309-374)||(23838173-23838238)
chr8 (309-405)||(30439048-30439147)
chr8 (353-405)||(34947524-34947576)
chr8 (365-405)||(37197912-37197952)
chr8 (353-405)||(40399500-40399552)
chr8 (309-400)||(13797446-13797537)
chr8 (364-395)||(1276539-1276570)
chr8 (356-395)||(18308261-18308300)
chr8 (92-180)||(41455183-41455272)
chr8 (19-76)||(13369904-13369961)
chr8 (21-78)||(39193961-39194018)
chr8 (309-395)||(44429228-44429314)
chr8 (309-395)||(44430245-44430331)
chr8 (353-393)||(3990193-3990233)
chr8 (20-48)||(4166636-4166664)
chr8 (309-341)||(39921980-39922012)
chr8 (309-341)||(44430071-44430103)
chr8 (309-341)||(44433806-44433838)
chr8 (309-341)||(44433980-44434012)
[»] chr3 (37 HSPs)
chr3 (304-404)||(37760496-37760596)
chr3 (309-405)||(837209-837305)
chr3 (309-405)||(18094960-18095056)
chr3 (309-395)||(18094745-18094831)
chr3 (309-395)||(38887381-38887467)
chr3 (309-405)||(11454209-11454305)
chr3 (309-405)||(36643133-36643229)
chr3 (309-395)||(53047603-53047689)
chr3 (309-405)||(43017275-43017371)
chr3 (309-405)||(46451474-46451570)
chr3 (309-405)||(47503059-47503155)
chr3 (316-405)||(11454574-11454663)
chr3 (309-401)||(38887588-38887682)
chr3 (309-400)||(40050854-40050945)
chr3 (353-405)||(47503232-47503284)
chr3 (309-400)||(38887806-38887897)
chr3 (357-405)||(11453990-11454038)
chr3 (356-404)||(35560153-35560201)
chr3 (353-405)||(46451331-46451383)
chr3 (309-394)||(47519871-47519956)
chr3 (309-405)||(11522536-11522632)
chr3 (309-405)||(20877222-20877318)
chr3 (309-393)||(45514437-45514520)
chr3 (353-394)||(24365782-24365823)
chr3 (353-394)||(47519974-47520015)
chr3 (17-78)||(53888517-53888578)
chr3 (353-405)||(850980-851032)
chr3 (355-395)||(11454433-11454473)
chr3 (353-405)||(16015256-16015308)
chr3 (364-395)||(54274791-54274822)
chr3 (17-123)||(36637784-36637891)
chr3 (353-395)||(51654092-51654134)
chr3 (353-403)||(52300759-52300809)
chr3 (312-345)||(25716971-25717004)
chr3 (309-341)||(3847829-3847861)
chr3 (309-341)||(11220781-11220813)
chr3 (309-341)||(43819332-43819364)
[»] chr4 (51 HSPs)
chr4 (309-405)||(28379768-28379863)
chr4 (309-405)||(44500676-44500772)
chr4 (309-405)||(21585562-21585658)
chr4 (309-405)||(48076194-48076290)
chr4 (309-405)||(48076372-48076468)
chr4 (309-400)||(22292902-22292993)
chr4 (315-405)||(22292701-22292791)
chr4 (316-405)||(8118608-8118697)
chr4 (309-394)||(24049569-24049654)
chr4 (309-405)||(23952786-23952882)
chr4 (309-405)||(43161746-43161842)
chr4 (309-405)||(47768956-47769052)
chr4 (309-405)||(53144851-53144947)
chr4 (309-405)||(54653655-54653751)
chr4 (309-395)||(7796789-7796875)
chr4 (309-403)||(23952512-23952606)
chr4 (309-405)||(2177268-2177364)
chr4 (309-405)||(4941682-4941778)
chr4 (317-405)||(8118394-8118481)
chr4 (309-405)||(36639176-36639272)
chr4 (309-405)||(48076549-48076645)
chr4 (310-405)||(36639350-36639445)
chr4 (17-78)||(27143208-27143269)
chr4 (310-405)||(2481657-2481749)
chr4 (309-402)||(28379981-28380073)
chr4 (353-405)||(28389777-28389829)
chr4 (309-405)||(8397748-8397844)
chr4 (309-405)||(12796126-12796222)
chr4 (354-405)||(21581282-21581333)
chr4 (309-405)||(29967183-29967279)
chr4 (309-405)||(47631364-47631460)
chr4 (309-405)||(52689624-52689720)
chr4 (309-392)||(7821523-7821606)
chr4 (311-393)||(7809354-7809436)
chr4 (364-405)||(8079354-8079395)
chr4 (354-403)||(43161933-43161982)
chr4 (309-400)||(47631543-47631633)
chr4 (309-405)||(7821307-7821403)
chr4 (17-141)||(9119777-9119902)
chr4 (309-405)||(28813229-28813324)
chr4 (309-405)||(32010688-32010785)
chr4 (309-376)||(15456296-15456363)
chr4 (309-376)||(15463680-15463747)
chr4 (359-405)||(24049337-24049383)
chr4 (368-405)||(41852151-41852188)
chr4 (19-76)||(42954640-42954697)
chr4 (93-183)||(46670012-46670103)
chr4 (353-405)||(8479149-8479200)
chr4 (309-345)||(33117451-33117487)
chr4 (16-44)||(43929794-43929822)
chr4 (17-45)||(46669935-46669963)
[»] chr5 (36 HSPs)
chr5 (310-405)||(11313807-11313902)
chr5 (309-405)||(16528604-16528700)
chr5 (309-405)||(11313644-11313740)
chr5 (309-405)||(12442158-12442254)
chr5 (309-405)||(26523165-26523261)
chr5 (309-400)||(41093080-41093171)
chr5 (309-400)||(41092901-41092991)
chr5 (309-405)||(11313983-11314080)
chr5 (309-405)||(9488075-9488171)
chr5 (309-405)||(16529139-16529235)
chr5 (309-405)||(19121911-19122007)
chr5 (309-405)||(19122247-19122343)
chr5 (309-405)||(24351477-24351573)
chr5 (309-395)||(26523271-26523357)
chr5 (309-395)||(35159708-35159793)
chr5 (314-403)||(16526207-16526296)
chr5 (309-405)||(7127563-7127659)
chr5 (321-389)||(24326541-24326609)
chr5 (321-389)||(24350732-24350800)
chr5 (321-389)||(24351286-24351354)
chr5 (355-405)||(43394959-43395009)
chr5 (309-405)||(7673224-7673321)
chr5 (353-405)||(16305394-16305446)
chr5 (309-395)||(16528963-16529047)
chr5 (353-405)||(24350924-24350976)
chr5 (317-405)||(16528793-16528881)
chr5 (309-405)||(31486841-31486937)
chr5 (309-405)||(31487089-31487185)
chr5 (353-435)||(43395106-43395188)
chr5 (309-403)||(14166190-14166285)
chr5 (309-405)||(23138036-23138131)
chr5 (309-405)||(35159423-35159517)
chr5 (17-57)||(3081322-3081362)
chr5 (309-341)||(38268884-38268916)
chr5 (19-48)||(2679878-2679907)
chr5 (17-78)||(39428971-39429032)
[»] chr6 (23 HSPs)
chr6 (311-405)||(9828925-9829019)
chr6 (309-405)||(17201601-17201697)
chr6 (309-405)||(27579602-27579698)
chr6 (309-395)||(23622222-23622308)
chr6 (309-395)||(25068192-25068278)
chr6 (309-405)||(23610436-23610532)
chr6 (309-405)||(17202854-17202950)
chr6 (309-405)||(17906806-17906902)
chr6 (309-405)||(4811068-4811164)
chr6 (309-405)||(32208413-32208509)
chr6 (17-78)||(2502356-2502417)
chr6 (310-405)||(808834-808930)
chr6 (354-405)||(17202680-17202731)
chr6 (312-405)||(25067969-25068062)
chr6 (309-401)||(15130903-15130995)
chr6 (309-405)||(4100320-4100420)
chr6 (359-405)||(27315340-27315386)
chr6 (17-123)||(4089387-4089493)
chr6 (309-340)||(8674478-8674509)
chr6 (309-340)||(8685157-8685188)
chr6 (359-405)||(26832522-26832568)
chr6 (309-371)||(29201562-29201624)
chr6 (309-341)||(4125719-4125751)
[»] scaffold0240 (2 HSPs)
scaffold0240 (309-437)||(13096-13224)
scaffold0240 (356-405)||(13302-13351)
[»] scaffold0018 (1 HSPs)
scaffold0018 (309-405)||(163808-163904)
[»] chr2 (37 HSPs)
chr2 (309-405)||(28611814-28611910)
chr2 (309-393)||(28612039-28612123)
chr2 (309-405)||(28612239-28612335)
chr2 (309-393)||(41326373-41326457)
chr2 (309-393)||(10129515-10129599)
chr2 (309-405)||(12898027-12898123)
chr2 (309-405)||(41995759-41995855)
chr2 (309-403)||(12896434-12896528)
chr2 (309-405)||(28612663-28612757)
chr2 (309-393)||(44256477-44256561)
chr2 (309-393)||(44543733-44543817)
chr2 (309-405)||(29550137-29550237)
chr2 (309-395)||(627541-627627)
chr2 (17-123)||(9087455-9087561)
chr2 (17-123)||(31584756-31584862)
chr2 (353-405)||(5001705-5001757)
chr2 (309-405)||(11735914-11736009)
chr2 (309-393)||(28612464-28612547)
chr2 (309-393)||(29549795-29549879)
chr2 (309-388)||(5013219-5013298)
chr2 (17-116)||(11522170-11522269)
chr2 (309-405)||(28612874-28612971)
chr2 (358-405)||(627629-627676)
chr2 (309-405)||(3249805-3249901)
chr2 (354-393)||(5001392-5001431)
chr2 (354-393)||(5013062-5013101)
chr2 (309-405)||(37131494-37131589)
chr2 (309-405)||(44543932-44544028)
chr2 (19-76)||(22101630-22101687)
chr2 (353-405)||(11736349-11736401)
chr2 (357-405)||(19640359-19640407)
chr2 (357-405)||(19838952-19839000)
chr2 (19-78)||(39205047-39205106)
chr2 (98-136)||(27987634-27987674)
chr2 (98-136)||(28074167-28074207)
chr2 (309-341)||(2132273-2132305)
chr2 (353-405)||(6347941-6347992)
[»] scaffold0294 (1 HSPs)
scaffold0294 (309-395)||(12401-12487)
[»] scaffold0013 (1 HSPs)
scaffold0013 (353-405)||(102751-102803)
[»] scaffold0504 (1 HSPs)
scaffold0504 (309-405)||(1539-1636)
[»] scaffold0320 (1 HSPs)
scaffold0320 (309-405)||(14586-14682)
[»] scaffold0598 (1 HSPs)
scaffold0598 (17-78)||(9395-9456)
[»] scaffold0648 (1 HSPs)
scaffold0648 (16-44)||(7429-7457)


Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 17 - 405
Target Start/End: Complemental strand, 6538049 - 6537661
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||       | ||||||||| ||| |||||||||||||||    
T  6538049 atattaaatttgaagagttcatataaacattctcaaaccccataaaatcctcctccaatacatttttttaattctccaaacgaggagagttttatatttt 6537950  T
Q  117 gaagaaataagccccc-aaagtctcttattttaatgtctatctatttcttccccttactcattcctttattttcaaatctttacctccccttcccctgca 215  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||    
T  6537949 gaagaaataagccccccaaagtctcttattttaatgtc-atctatttcttccccttactcattcctttattttcaagtctttacttccccttccccttca 6537851  T
Q  216 agtttgcaaacaattagtgtgtacctttttaatcccatccatcaacaggttggacattagccctgtccggaacattgttaatcaccattatccttattaa 315  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6537850 agttcgcaaacaattagtgtgtacctttttaatcccatccatcatcagattggacatttgccctgtccggaacattgttaatcaccattatccttattaa 6537751  T
Q  316 ttttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6537750 ttttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatct 6537661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 5428532 - 5428628
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  5428532 ttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 5428628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 42492267 - 42492171
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       || ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  42492267 ttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatct 42492171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 51113910 - 51114006
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51113910 ttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattccatct 51114006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 318559 - 318655
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||  |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  318559 ttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 318655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 27296166 - 27296262
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       ||||| |||| |||||||||||||||||||||||||||||| | |||||||||    
T  27296166 ttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattccatct 27296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 27296341 - 27296437
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||        ||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  27296341 ttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttcatct 27296437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 38684019 - 38684115
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       |||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  38684019 ttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattccatct 38684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 42497035 - 42496939
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       ||||||||||  |||||||| |||||||||||||||||||||| |||||||||    
T  42497035 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccatct 42496939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 42497393 - 42497297
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||| |||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  42497393 ttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 42497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 44262668 - 44262764
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       || ||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  44262668 ttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattccatct 44262764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 44263093 - 44263189
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       ||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  44263093 ttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatct 44263189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 51114094 - 51114190
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||| | ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  51114094 ttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 51114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 51272594 - 51272499
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatc 404  Q
    |||||||||||||||||||| |||||||||||| |||       | |||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  51272594 ttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 51272499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 405
Target Start/End: Original strand, 21617762 - 21617856
Alignment:
Q  311 attaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||  |||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  21617762 attaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 21617856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 1156167 - 1156071
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||| |||||| | ||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  1156167 ttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 1156071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 3227324 - 3227229
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||| |||       | |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  3227324 ttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 3227229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 16165788 - 16165692
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||| | ||||||||| |||       ||| |||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  16165788 ttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 16165692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 33375634 - 33375720
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||  | ||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||    
T  33375634 ttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaaca 33375720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 1647547 - 1647643
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| || |||||| |||       | |||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  1647547 ttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttcatct 1647643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 5428937 - 5429033
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||  |||       |||||||| | ||||||||||||||||||||||||| |||||| |||||||||    
T  5428937 ttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattccatct 5429033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 12625816 - 12625920
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatattttga 118  Q
    ||||||||  || ||||||||||||||||| ||||||||  ||||  |||||||||||||       ||||||||||||||| ||| |||||||||||||    
T  12625816 attaaattcgaataattcatataaacctttccaaaccccccaaaactctcctccaatacaagtttttagttctccaaatgaggagatttttatattttga 12625915  T
Q  119 agaaa 123  Q
    |||||    
T  12625916 agaaa 12625920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28950272 - 28950176
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||| |||||||||||||||||       |||| ||||| ||||||||| |||| ||||||||||||||||| ||| |||||    
T  28950272 ttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatct 28950176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 51113727 - 51113823
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||| ||||||||| |||       |||||||||| ||||||||| |||||||||||||||||||||| ||| |||||    
T  51113727 ttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatct 51113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 44263314 - 44263409
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatc 404  Q
    ||||||||||||||||||||||| |||| |||| |||        ||||||||| | |||||||||||||||||||||||||||||| ||| ||||    
T  44263314 ttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 44263409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 42497570 - 42497484
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    |||||||||||||||||||||||  ||||||||||||        |||||||||| ||||||||||||| ||||||||||| |||||    
T  42497570 ttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaaca 42497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 5429100 - 5429152
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||    
T  5429100 ccgctcaattgctttattaggtttgcaattatttaacctaacaaattccatct 5429152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 28950089 - 28950016
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaatt 382  Q
    ||||||||||||||| ||||||||||||||||| |||       |||||||||| |||||||||||||||||||    
T  28950089 ttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28950361 - 28950277
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||| |||| || ||||||||| |||       ||||| |||| ||||||||||||||||||||||||||||||    
T  28950361 ttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 36385428 - 36385369
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||||||||||||||||||  ||||||| |||  |||||||||||||||||||    
T  36385428 attaaatttaaagaattcatataaactctttcaaatccctcaaaatcctcctccaataca 36385369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 52740704 - 52740800
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| || | ||||||||| |||       |||||||||| ||||||||||||| |||||||||||| ||||| |||| ||||    
T  52740704 ttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattcaatct 52740800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 6015522 - 6015461
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| ||||||||||||||||| | ||||||||| ||||| |||| |||||||||    
T  6015522 atattaaatttgaagaattcatataaaccctctcaaaccccttaaaaccctcatccaataca 6015461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 18912219 - 18912316
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttg-caattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||  |||       |||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||    
T  18912219 ttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttcatct 18912316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 44099727 - 44099688
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  44099727 cgctcatttgctttattaggtttgcaattatttaacctaa 44099688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 45417655 - 45417616
Alignment:
Q  356 ctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaaca 45417616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 6537532 - 6537465
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggttt 376  Q
    ||||||||||||||||||||| |||||||||||||||       || ||||||| |||||||||||||    
T  6537532 ttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 393
Target Start/End: Original strand, 24595278 - 24595316
Alignment:
Q  355 gctcatttactttattaggtttgcaattatttaacctaa 393  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24595278 gctcatttgctttattaggtttgcaattatttaacctaa 24595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 18912331 - 18912428
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttg-caattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||| ||||| ||||||||||||||  ||||||||||| ||||| ||| |||||    
T  18912331 ttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttcatct 18912428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 52740919 - 52740951
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    |||||||||||||||||||||||||||||||||    
T  52740919 ttattaattttgttaggtctgcaacaatttaac 52740951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 12115359 - 12115405
Alignment:
Q  359 atttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatct 12115405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 28949950 - 28949908
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    |||| ||||| |||||||||||||| |||||||||||||||||    
T  28949950 ccgcacatttgctttattaggtttgtaattatttaacctaaca 28949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 45417741 - 45417709
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaac 45417709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 47790700 - 47790732
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  47790700 ttattaattttgttaggtctgcagcaatttaac 47790732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 11650109 - 11650013
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11650109 ttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 11650013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23591515 - 23591419
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  23591515 ttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 23591419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 4680997 - 4680901
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  4680997 ttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 4680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 9142234 - 9142144
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacatt 399  Q
    |||||||||||||||||||||||| |||||||| |||       |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9142234 ttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaacacatt 9142144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 18486638 - 18486734
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  18486638 ttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 18486734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 48640902 - 48640806
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||| ||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  48640902 ttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 48640806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 405
Target Start/End: Original strand, 16671615 - 16671705
Alignment:
Q  315 attttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||| |||| |||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  16671615 attttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 16671705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 405
Target Start/End: Original strand, 17645983 - 17646073
Alignment:
Q  315 attttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||| |||| |||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  17645983 attttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 17646073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 22556691 - 22556812
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    |||||||||||||| |||||||| ||||||| ||||| | |  ||||||||||| |||||||        |||| |||||||||||||||||||||||||    
T  22556691 atattaaatttaaaaaattcatagaaaccttctcaaatctcccaaaatcctccttcaatacaattttaaggttccccaaatgagaagagttttatatttt 22556790  T
Q  117 gaagaa--ataagcccccaaag 136  Q
    ||||||  ||||||||||||||    
T  22556791 gaagaaatataagcccccaaag 22556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 2354766 - 2354670
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       | |||||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  2354766 ttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccatct 2354670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 9142062 - 9141966
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       | |||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  9142062 ttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 9141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 12140962 - 12140866
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| | |||||||||||||||||||||||||||||| ||| |||||    
T  12140962 ttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaatttcatct 12140866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 16492645 - 16492550
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||||||        |||||||||| |||||||| ||||||||||||||||||||||| ||| |||||    
T  16492645 ttattaattttgttaggtctgcagcaatttaactta-tttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaatttcatct 16492550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 22324288 - 22324384
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       ||||||||||||||| ||||||||| ||||||| ||||||||| ||| |||||    
T  22324288 ttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaatttcatct 22324384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 27716410 - 27716314
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||  | ||||||||| |||       || ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27716410 ttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatct 27716314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 27716632 - 27716536
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| | || ||||||||| |||       |||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  27716632 ttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttccatct 27716536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 35124729 - 35124821
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattcc 401  Q
    |||||||| ||||||||| ||||||||||||||||||        || |||||| |||||||||||||||||||||||||||||||| |||||    
T  35124729 ttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaattcc 35124821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 2527055 - 2526969
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnncc-gctcatttactttattaggtttgcaattatttaacctaac 394  Q
    ||||||||||||||||||||||| ||||||||| |||       || |||||||| |||||||||||||||||||||||||||||||    
T  2527055 ttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaac 2526969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 11646032 - 11645946
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||||||||| ||||| |||       |||||||||| |||||||||||||| |||||||||||||||||    
T  11646032 ttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaaca 11645946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 11646498 - 11646404
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    ||||||||||||||| ||||||| ||| ||||  |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11646498 ttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 11646404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 21224142 - 21224228
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| ||||||||| |||       ||||| |||| ||||||||||||| ||||||||||||||||||    
T  21224142 ttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaaca 21224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 34837191 - 34837288
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnn-ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||        ||||| |||| ||||||||||||| |||||||||||||||||| |||||||||    
T  34837191 ttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattccatct 34837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 45419737 - 45419641
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||  |||||||| |||         |||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  45419737 ttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 45419641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 32278237 - 32278158
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaa 388  Q
    ||||||||| ||||| ||||||| ||||||||| |||       ||||||||||||||||||||||||||||||||||||    
T  32278237 ttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 34837446 - 34837541
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||| |||||||||||||| || ||||||||| |||       |||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  34837446 ttatttattttgttaggtcttcagcaatttaacataatttttt-ccgctcatttactttattaggtttgcaattattttacctaacaaatttcatct 34837541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 40450202 - 40450116
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| ||||||||| |||         |||||||| ||||||||| ||||||||||||||||||||||    
T  40450202 ttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaaca 40450116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 18487199 - 18487251
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  18487199 ccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 18487251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 19222109 - 19222206
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnn-ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||| |||        ||| |||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  19222109 ttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattccatct 19222206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 405
Target Start/End: Complemental strand, 23591684 - 23591636
Alignment:
Q  357 tcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  23591684 tcatttgctttattaggtttgcaattatttaacctaacaaattccatct 23591636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 30991508 - 30991560
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  30991508 ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 30991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 45419899 - 45419847
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  45419899 ccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatct 45419847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 48641117 - 48641036
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacc 390  Q
    ||||||||||||||||||||| | ||||||||| ||        |||||||||| |||||||||||||||||||||||||||    
T  48641117 ttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaacc 48641036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 11646310 - 11646218
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattcc 401  Q
    ||||||||||||||| ||||||| ||| ||||| |||       || ||||||| |||| ||||||||||||||||||||||||||| |||||    
T  11646310 ttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattcc 11646218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 16671250 - 16671346
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| |||||| |   ||       |||||||||| || ||||||||||||||||||||||||||||| ||| |||||    
T  16671250 ttattaattttgttaggtctgcagcaattttaaccaaatattttccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcatct 16671346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 17645618 - 17645714
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| |||||| |   ||       |||||||||| || ||||||||||||||||||||||||||||| ||| |||||    
T  17645618 ttattaattttgttaggtctgcagcaattttaaccaaatattttccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcatct 17645714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 43059240 - 43059291
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  43059240 cgctcatttgctttattaggtttgcaattatttaatctaacaaattccatct 43059291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 22774011 - 22773916
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       |||||||||| ||||| || |||||||||||||||| |||||| ||| |||||    
T  22774011 ttattaattttgttacgtctgcaacaatttaacctaatttttc-ccgctcatttgctttactatgtttgcaattatttaatctaacaaatttcatct 22773916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 11646631 - 11646705
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaatta 383  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| ||||||||||||||||||||    
T  11646631 ttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 46264337 - 46264288
Alignment:
Q  356 ctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  46264337 ctcatttgctttattaggtttgcaattatttaacctaacaaattctatct 46264288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 4681202 - 4681150
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||| ||||||||||||||||||||| | |||||||||    
T  4681202 ccgctcatttgctttattatgtttgcaattatttaacctaataaattccatct 4681150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 1566560 - 1566513
Alignment:
Q  358 catttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  1566560 catttgctttattaggtttgcaattatttaacctaacaaatttcatct 1566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 21128044 - 21128136
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattcc 401  Q
    ||||||||||||||||||||||| || |||||| |||       ||||| |||| |||||||| |||| || ||||||||||||||| |||||    
T  21128044 ttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaattcc 21128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 405
Target Start/End: Complemental strand, 40686943 - 40686897
Alignment:
Q  359 atttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||||||||||||||||||||| ||| |||||    
T  40686943 atttgctttattaggtttgcaattatttaacctaacaaattacatct 40686897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 48641497 - 48641447
Alignment:
Q  355 gctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||| |||||||| ||||||||||||||||||||||| ||| |||||    
T  48641497 gctcatttgctttattaagtttgcaattatttaacctaacaaatttcatct 48641447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 2853262 - 2853222
Alignment:
Q  365 tttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  2853262 tttattaggtttgcaattatttaacctaacaaatttcatct 2853222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 34837392 - 34837424
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    |||||||||||||||||||||||||||||||||    
T  34837392 ttattaattttgttaggtctgcaacaatttaac 34837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 31055465 - 31055358
Alignment:
Q  18 tattaaatttaaagaattcatataaaccttttcaaacc-ccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    |||||||||| ||||||| ||||||| | | ||||||| ||  |||| ||||||||||||||       ||||| ||||||||| || ||||||||||||    
T  31055465 tattaaatttgaagaatttatataaatcatctcaaacctccccaaaaccctcctccaatacaattttttagttccccaaatgaggagggttttatatttt 31055366  T
Q  117 gaagaaat 124  Q
     |||||||    
T  31055365 aaagaaat 31055358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 4681644 - 4681603
Alignment:
Q  364 ctttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||||| ||||| ||| |||||    
T  4681644 ctttattaggtttgcaattatttaacttaacaaatttcatct 4681603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 4455371 - 4455403
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||| |||||||||||||||||||||    
T  4455371 ttattaattttattaggtctgcaacaatttaac 4455403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 4681695 - 4681659
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaa 345  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4681695 ttattaattttgttacgtctgcagcaatttaacttaa 4681659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23828229 - 23828133
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  23828229 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 23828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 23085864 - 23085960
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||||| |||       || ||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  23085864 ttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaattccatct 23085960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 27853772 - 27853676
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||| | ||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27853772 ttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatct 27853676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 1197882 - 1197978
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||| ||||||||||||||||||||| ||| |||||    
T  1197882 ttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatct 1197978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 27085439 - 27085270
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| ||||||||||||||||| |  |||||||| ||||| | ||||||||||||       ||||| |||||||||||||||||||||||||    
T  27085439 atattaaatttgaagaattcatataaaccctcccaaaccccttaaaaccatcctccaatacaattttttagttccccaaatgagaagagttttatatttt 27085340  T
Q  117 gaag--aaataag--cccccaaagtctcttattttaatgtctatctatttcttccccttactcattccttt 183  Q
     |||  |||||||  ||||||||| | ||  ||  ||||||  |||||||||||| |||||||||||||||    
T  27085339 aaagaaaaataagtccccccaaagcccctccttcaaatgtc-ctctatttcttccacttactcattccttt 27085270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 39922190 - 39922094
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| ||||||| ||||||| |||||||||||||       ||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  39922190 ttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatct 39922094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23838445 - 23838348
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac-ttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| ||||       |||||||||| ||||||||| |||||||||||||||||||||| ||| |||||    
T  23838445 ttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgcatct 23838348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 35617685 - 35617782
Alignment:
Q  309 ttattaattttgttaggtctgcaa-caatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| |||||||| |||||||||||||       ||||||||||  ||||||||||||||||||||||||||||||| |||| ||||    
T  35617685 ttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattctatct 35617782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23831047 - 23830951
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| ||||  |||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  23831047 ttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgcatct 23830951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 37198400 - 37198304
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       |||||||||| ||||||| ||||| ||||| |||||||||||| |||||||||    
T  37198400 ttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattccatct 37198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 37410174 - 37410078
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||| || |||| |||||||||||||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  37410174 ttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 37410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 3459233 - 3459141
Alignment:
Q  313 taattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||||||| ||||||||| |||       |||||||||| ||||||||||||||||||||||||| |||||| ||| |||||    
T  3459233 taattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttcatct 3459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23960683 - 23960588
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| |||||||||||||||||||||       | ||||| || ||||||||||||| |||||||||||||||||| ||| |||||    
T  23960683 ttattaattttgttacgtctgcaacaatttaacttaatttttttctgctca-ttgctttattaggtttacaattatttaacctaacaaatttcatct 23960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 29580140 - 29580044
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||| ||||||||| |||       ||||||||||  |||||||||||||||||||||||| |||||||||| |||||    
T  29580140 ttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcatct 29580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 32062865 - 32062917
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  32062865 ccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 32062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 38111392 - 38111444
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  38111392 ccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatct 38111444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 33198837 - 33198933
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| || |||||||||  || | ||||||||||||| |||||||||    
T  33198837 ttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaattccatct 33198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 44429054 - 44429150
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||| |||||| ||||| |||       || ||||||| |||||||||||  ||||| ||||||||||||| |||||||||    
T  44429054 ttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattccatct 44429150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 1839810 - 1839917
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagtt-ctccaaatgagaagagttttatattt 115  Q
    ||||||||||| ||||||||||||||||| | | |||||||  |||| ||||||||||||||       |||| | ||||||||| || |||||||||||    
T  1839810 atattaaatttgaagaattcatataaaccctcttaaaccccccaaaaccctcctccaatacaatttttaagttcccccaaatgaggagggttttatattt 1839909  T
Q  116 tgaagaaa 123  Q
    ||||||||    
T  1839910 tgaagaaa 1839917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 23960897 - 23960806
Alignment:
Q  313 taattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||||||| ||||||||| |||       || ||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  23960897 taattttgttacgtctgcagcaatttaacctaatttttt-ccactcatttgctttattaggtttgtaattatttaacctaacaaattccatct 23960806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 37426166 - 37426216
Alignment:
Q  355 gctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  37426166 gctcatttactttattaggtttgcaattgtttaacataacaaattccatct 37426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 37198213 - 37198131
Alignment:
Q  312 ttaattttgttaggtctgcaacaatttaacttaannnnnnn-ccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    |||||||||||| ||||||| ||||||||| |||        |||||||||| ||||||||||||||||||||||||||||||    
T  37198213 ttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaa 37198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 23838238 - 23838173
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggt 374  Q
    ||||||||||||||||||||||||||||||||| |||       |||||||||| |||||||||||    
T  23838238 ttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggt 23838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 30439147 - 30439048
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaa---nnnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||||  |||          | | |||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  30439147 ttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 30439048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 34947524 - 34947576
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  34947524 ccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatct 34947576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 37197952 - 37197912
Alignment:
Q  365 tttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  37197952 tttattaggtttgcaattatttaacctaacaaattccatct 37197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 40399552 - 40399500
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  40399552 ccgctcatttgttttattaggtttgtaattatttaacctaacaaattccatct 40399500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 13797446 - 13797537
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    |||||||||||||||||| |||| ||| ||||| ||        | |||||||| |||||||||||||||||||||||||| ||||| ||||    
T  13797446 ttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaattc 13797537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 1276570 - 1276539
Alignment:
Q  364 ctttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||||||||||||    
T  1276570 ctttattaggtttgcaattatttaacctaaca 1276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 18308300 - 18308261
Alignment:
Q  356 ctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  18308300 ctcatttgctttattaggttcgcaattatttaacctaaca 18308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 41455272 - 41455183
Alignment:
Q  92 ccaaatgagaagagttttatattttgaag--aaataagcccccaaagtctcttattttaatgtctatctatttcttccccttactcattcc 180  Q
    ||||||||| || ||||||||||||||||  |||||||||||||||||| ||  || | |||||| | |||||||||| ||||||| ||||    
T  41455272 ccaaatgaggagggttttatattttgaagaaaaataagcccccaaagtccctccttctgatgtct-tatatttcttccacttactccttcc 41455183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 13369904 - 13369961
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaata 76  Q
    ||||||||| ||||||||||||||||||||  |||  ||  |||||||||||||||||    
T  13369904 attaaatttgaagaattcatataaacctttcaaaaaacctcaaaatcctcctccaata 13369961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 39194018 - 39193961
Alignment:
Q  21 taaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||| ||||||||||||||||| ||  |||||||  |||| ||||||||||||||    
T  39194018 taaatttgaagaattcatataaacccttcaaaacccccaaaaaccctcctccaataca 39193961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 44429228 - 44429314
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||||||| ||||| |||       || ||||||| |||||||||||  ||| | |||||||| ||||    
T  44429228 ttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttattaggtaagcagtaatttaacccaaca 44429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 44430245 - 44430331
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||||||| ||||| |||       || | |||||||||||||||||  ||| | |||||||| ||||    
T  44430245 ttattaattttgttaggtctgcaacaacttaacctaatatttttcctcccatttactttattaggtaagcagtaatttaacccaaca 44430331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 3990193 - 3990233
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||| ||  |||||||||||||||||||||||||    
T  3990193 ccgctcatttatttgtttaggtttgcaattatttaacctaa 3990233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 4166636 - 4166664
Alignment:
Q  20 ttaaatttaaagaattcatataaaccttt 48  Q
    |||||||||||||||||||||||||||||    
T  4166636 ttaaatttaaagaattcatataaaccttt 4166664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 39922012 - 39921980
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||| |||||||||||||||||    
T  39922012 ttattaattttgttacgtctgcaacaatttaac 39921980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 44430071 - 44430103
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||||||| |||||    
T  44430071 ttattaattttgttaggtctgcaacaacttaac 44430103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 44433806 - 44433838
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||||||| |||||    
T  44433806 ttattaattttgttaggtctgcaacaacttaac 44433838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 44433980 - 44434012
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||||||| |||||    
T  44433980 ttattaattttgttaggtctgcaacaacttaac 44434012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 37760496 - 37760596
Alignment:
Q  304 tatccttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    |||||||||||||||||||| ||||||||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||    
T  37760496 tatccttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 37760595  T
Q  404 c 404  Q
    |    
T  37760596 c 37760596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 837305 - 837209
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||| ||||||||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  837305 ttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 837209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 18094960 - 18095056
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||||||||||| ||||||||||||| |||||||||    
T  18094960 ttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattccatct 18095056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 18094745 - 18094831
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| |||||||||||||       ||||| |||| ||||||||||||||||||||||||||||||||    
T  18094745 ttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaaca 18094831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 38887467 - 38887381
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| ||||||||||||||||||||||||||||||||    
T  38887467 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 38887381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 11454209 - 11454305
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       |||||||| ||||||||| |||||||||||||||||||||||| ||| |||||    
T  11454209 ttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatttcatct 11454305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 36643229 - 36643133
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  36643229 ttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 36643133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 53047689 - 53047603
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||| |||||||||||||||||||||||||||    
T  53047689 ttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaaca 53047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 43017275 - 43017371
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| |||||||| ||||||||||||||||||||||| ||| |||||    
T  43017275 ttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatct 43017371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 46451474 - 46451570
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| |||||||  |||||||| |||       ||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  46451474 ttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatct 46451570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 47503155 - 47503059
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| | |||||||||||||||||||||||||||||| ||| |||||    
T  47503155 ttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatct 47503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 405
Target Start/End: Original strand, 11454574 - 11454663
Alignment:
Q  316 ttttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||| ||||||| ||||||||| |||       |||||||||| |||||||||||||||||| ||||||||||||| |||||||||    
T  11454574 ttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattccatct 11454663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 38887682 - 38887588
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnn--ccgctcatttactttattaggtttgcaattatttaacctaacacattcc 401  Q
    ||||||||||| ||||||||||| ||||||||| |||         |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  38887682 ttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcc 38887588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 40050854 - 40050945
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    ||||| |||||||||| |||||| ||||||||| |||       |||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  40050854 ttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaattc 40050945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 47503284 - 47503232
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  47503284 ccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 47503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 400
Target Start/End: Complemental strand, 38887897 - 38887806
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    ||||||||||| | |||||||||  |||||||| |||       |||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  38887897 ttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaattc 38887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 11453990 - 11454038
Alignment:
Q  357 tcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  11453990 tcatttgctttattaggtttgcaattatttaacctaacaaattacatct 11454038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 35560153 - 35560201
Alignment:
Q  356 ctcatttactttattaggtttgcaattatttaacctaacacattccatc 404  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  35560153 ctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 35560201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 46451331 - 46451383
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||| |||||    
T  46451331 ccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatct 46451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaac 394  Q
    |||||||||||||||| | |||| ||||||||| |||       |||||||||| |||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 11522536 - 11522632
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||| |||||||||||| |||       | | ||||||  |||||||||||| ||||| |||||||||||| ||| |||||    
T  11522536 ttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttcatct 11522632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 20877318 - 20877222
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||  |||       || ||||||||||||||||||||||   ||||||||||||||| ||| |||||    
T  20877318 ttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcatct 20877222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 45514520 - 45514437
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||| ||||||| ||||||||  |||       ||| |||||||||||||||| ||||||||||||||||||||    
T  45514520 ttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttattag-tttgcaattatttaacctaa 45514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 24365782 - 24365823
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaac 394  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  24365782 ccgctcatttgatttattaggtttgcaattatttaacctaac 24365823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 47519974 - 47520015
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaac 394  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  47519974 ccgctcatttgctttattagggttgcaattatttaacctaac 47520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 53888578 - 53888517
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| ||||||||||||||||| |  ||||||||  |||| ||||||||||||||    
T  53888578 atattaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaataca 53888517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 850980 - 851032
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| ||| |||||    
T  850980 ccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatct 851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 11454433 - 11454473
Alignment:
Q  355 gctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11454433 gctcatttgctttattaggcttgcaattatttaacctaaca 11454473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 16015308 - 16015256
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||||||  |||||||||||||||||| |||| ||||    
T  16015308 ccgctcatttgctttattaggttaacaattatttaacctaacaaattctatct 16015256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 395
Target Start/End: Original strand, 54274791 - 54274822
Alignment:
Q  364 ctttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||||||||||||    
T  54274791 ctttattaggtttgcaattatttaacctaaca 54274822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 36637891 - 36637784
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnag-ttctccaaatgagaagagttttatattt 115  Q
    ||||||||||| |||||||||||||||  ||  ||||| |||||||| ||||||| ||||||       || ||| ||||||||  ||| ||||||||||    
T  36637891 atattaaatttgaagaattcatataaattttcccaaacaccataaaaccctcctctaatacaatttcgtagtttccccaaatgacgagaattttatattt 36637792  T
Q  116 tgaagaaa 123  Q
    ||||||||    
T  36637791 tgaagaaa 36637784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Original strand, 51654092 - 51654134
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||  |||||||||||| ||||||||||||||||||    
T  51654092 ccgctcatttgttttattaggtttacaattatttaacctaaca 51654134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 403
Target Start/End: Original strand, 52300759 - 52300809
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||| |||||||    
T  52300759 ccgctcatttactgtattaggttagcagtaatttaacctaacaaattccat 52300809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 25717004 - 25716971
Alignment:
Q  312 ttaattttgttaggtctgcaacaatttaacttaa 345  Q
    |||||||||||||||||||||||| |||||||||    
T  25717004 ttaattttgttaggtctgcaacaacttaacttaa 25716971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 3847829 - 3847861
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  3847829 ttattaattttgttaggtctgcagcaatttaac 3847861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 11220781 - 11220813
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  11220781 ttattaattttgttaggtctgcagcaatttaac 11220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 43819332 - 43819364
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  43819332 ttattaattttgttaggtctgcagcaatttaac 43819364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28379863 - 28379768
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  28379863 ttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca-attccatct 28379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 44500676 - 44500772
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  44500676 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattccatct 44500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 21585658 - 21585562
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| |||||||||||||||||||||       || ||||||| |||||||||||||||||||||||||| ||||| ||| |||||    
T  21585658 ttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcatct 21585562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 48076194 - 48076290
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||  |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  48076194 ttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 48076290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 48076372 - 48076468
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  48076372 ttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 48076468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 22292902 - 22292993
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    |||||||||||| |||||||||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  22292902 ttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 22292993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 405
Target Start/End: Original strand, 22292701 - 22292791
Alignment:
Q  315 attttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaataccatct 22292791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 405
Target Start/End: Original strand, 8118608 - 8118697
Alignment:
Q  316 ttttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||||| |||       |||||||||| |||||||||| ||||||||||||||||||||| ||| |||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatct 8118697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 24049569 - 24049654
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaac 394  Q
    |||||||||||||||||| |||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||    
T  24049569 ttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaac 24049654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 23952882 - 23952786
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       ||||||||||  ||||||||||||||||||||||||| ||||| |||||||||    
T  23952882 ttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccatct 23952786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 43161842 - 43161746
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||| |||||| ||||||||||||||||| |||       |||||||||| | |||||||||||||||||||||||||||||| ||| |||||    
T  43161842 ttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatct 43161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 47768956 - 47769052
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| ||| |||||||||||||||||||||||||||| ||| |||||    
T  47768956 ttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttcatct 47769052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 53144947 - 53144851
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||| |||       |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  53144947 ttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatct 53144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 54653751 - 54653655
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| |||||||||||||||| ||||||||||||||| |||| ||||    
T  54653751 ttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattcaatct 54653655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 7796789 - 7796875
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| |||||||||| ||| |||||||||||||||||    
T  7796789 ttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaaca 7796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 23952606 - 23952512
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    ||||||||||||||| ||||||| ||||||||| |||        ||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  23952606 ttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattccat 23952512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 2177268 - 2177364
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||| |||||| |||||| |||||||| ||||       |||||||||| |||||||||||||||||||| ||||||||||| ||| |||||    
T  2177268 ttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaatttcatct 2177364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 4941682 - 4941778
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||  ||| ||| |||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  4941682 ttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 4941778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 8118394 - 8118481
Alignment:
Q  317 tttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| |||||||||||||||||||||       | |||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  8118394 tttgttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 8118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 36639176 - 36639272
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || || | ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  36639176 ttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 36639272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 48076549 - 48076645
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||| ||||||||| |||       ||||| |||| ||||||||||||| |||||||||||||||||| |||||||||    
T  48076549 ttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattccatct 48076645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 36639350 - 36639445
Alignment:
Q  310 tattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||| |||| ||||||||| |||       ||| |||||| |||||||||| ||||||||||||||||||||| ||| |||||    
T  36639350 tattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttcatct 36639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 27143269 - 27143208
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| ||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  27143269 atattaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaataca 27143208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 405
Target Start/End: Complemental strand, 2481749 - 2481657
Alignment:
Q  310 tattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||| ||||||||||| ||||| |||       |||||||||| ||||||||||||||||   ||||||||||||| |||||||||    
T  2481749 tattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaattccatct 2481657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 402
Target Start/End: Complemental strand, 28380073 - 28379981
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattcca 402  Q
    ||||||||||||||||||||||| ||||||||| |||         ||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  28380073 ttattaattttgttaggtctgcaccaatttaacctaatttttctt-gctcatttgttttattaggtttgcaattatttaacctaacaaattcca 28379981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 28389829 - 28389777
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  28389829 ccgctcatttgctttattaggtttgcatttatttaacctaacaaattccatct 28389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 8397844 - 8397748
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       | |||| |||  ||||||||||||||||||||||||| ||||| ||| |||||    
T  8397844 ttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttcatct 8397748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 12796222 - 12796126
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| |||||| || | ||||||||| |||       ||||||||||  |||||||||||||||||||||||| |||||| |||||||||    
T  12796222 ttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccatct 12796126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Complemental strand, 21581333 - 21581282
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  21581333 cgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 21581282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 29967183 - 29967279
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||| ||||| |||       ||||||||||  |||||||| ||||||||||| |||||||||| |||||||||    
T  29967183 ttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattccatct 29967279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 47631364 - 47631460
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       | ||| |||| |||| ||||||||||||||||||||||||||| ||| |||||    
T  47631364 ttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcatct 47631460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 52689720 - 52689624
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| |||||||||||  |||||| | |||       |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  52689720 ttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatct 52689624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 7821523 - 7821606
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaaccta 392  Q
    ||||||||||||||||||||| | ||||||||| |||       | |||||||| |||||||||||||| ||||||||||||||    
T  7821523 ttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaaccta 7821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 7809354 - 7809436
Alignment:
Q  311 attaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    |||||||||||||||| |||||||||| ||| |||       | |||||||| |||||||||||||| |||||||||||||||    
T  7809354 attaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaa 7809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 8079354 - 8079395
Alignment:
Q  364 ctttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  8079354 ctttattaggtttgcaattatttaacctaacaaattccatct 8079395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 403
Target Start/End: Complemental strand, 43161982 - 43161933
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    ||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  43161982 cgctcatttgctttattaggtttgcaattatttaacttaacaaattccat 43161933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 47631543 - 47631633
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    ||||||||||||| ||||||||| ||||||||| |||       | |||| ||| |||||||||||||||||||||||||||||||| ||||    
T  47631543 ttattaattttgtcaggtctgcatcaatttaacctaatttatt-ctgctcttttgctttattaggtttgcaattatttaacctaacaaattc 47631633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 7821307 - 7821403
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       |||| ||||| ||||||||   ||||||||||||||||||| | |||||||||    
T  7821307 ttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattccatct 7821403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 9119777 - 9119902
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| ||||||||||||||| |||  ||||  |   |||| ||||||||||||||       ||||  ||||||||| |||||||||||||||    
T  9119777 atattaaatttgaagaattcatataaatcttcccaaatactc-aaaaccctcctccaatacaatattttagtttcccaaatgaggagagttttatatttt 9119875  T
Q  117 gaag--aaataagcccccaaagtctct 141  Q
    ||||  |||||||||| ||||||||||    
T  9119876 gaagaaaaataagccctcaaagtctct 9119902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 28813229 - 28813324
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| | |||||||||||  |||       |||||||||| |||||||||||||| |||||||||||| |||| ||| |||||    
T  28813229 ttattaattttgttaggtttacaacaatttaatctaatttttt-ccgctcatttgctttattaggtttgtaattatttaaccaaacaaatttcatct 28813324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 32010785 - 32010688
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacct-aacacattccatct 405  Q
    ||||||||||||||| |||||||  |||||||  |||       |||||||||| |||||||||||||| |||||||| |||| |||| |||||||||    
T  32010785 ttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccatct 32010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 15456296 - 15456363
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggttt 376  Q
    ||||||||||||||||||||||| ||||||||| |||       || ||||||| |||||||||||||    
T  15456296 ttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 15463680 - 15463747
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggttt 376  Q
    ||||||||||||||||||||||| ||||||||| |||       || ||||||| |||||||||||||    
T  15463680 ttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 24049337 - 24049383
Alignment:
Q  359 atttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||||||||||||||||| ||| ||| |||||    
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatct 24049383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 405
Target Start/End: Complemental strand, 41852188 - 41852151
Alignment:
Q  368 attaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatct 41852151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 42954697 - 42954640
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaata 76  Q
    ||||||||| ||||||||| ||||||||| ||||||| | | ||| ||||||||||||    
T  42954697 attaaatttgaagaattcacataaaccttctcaaacctccttaaaccctcctccaata 42954640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 46670012 - 46670103
Alignment:
Q  93 caaatgagaagagttttatattttgaag--aaataagcccccaaagtctcttattttaatgtctatctatttcttccccttactcattccttt 183  Q
    |||||||| || ||||||||||||||||  |||||| ||| ||||  | || |||||||||| | |||||||||| | |||||||||||||||    
T  46670012 caaatgaggagggttttatattttgaagaaaaataacccctcaaaacccctcattttaatgt-tctctatttctttcacttactcattccttt 46670103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 8479200 - 8479149
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||| |||||||||| ||||||||||| ||| |||||    
T  8479200 ccgctcatttgctttattagatttgcaatta-ttaacctaacaaatttcatct 8479149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 33117487 - 33117451
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaa 345  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  33117487 ttattaattttattaggtctgcaacaacttaacttaa 33117451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 43929794 - 43929822
Alignment:
Q  16 aatattaaatttaaagaattcatataaac 44  Q
    |||||||||||||||||||||||||||||    
T  43929794 aatattaaatttaaagaattcatataaac 43929822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 46669935 - 46669963
Alignment:
Q  17 atattaaatttaaagaattcatataaacc 45  Q
    |||||||||||||||||||||||||||||    
T  46669935 atattaaatttaaagaattcatataaacc 46669963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 11313807 - 11313902
Alignment:
Q  310 tattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||| ||||||||||||||||| |||       |||| ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatct 11313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 16528604 - 16528700
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| |||| |||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  16528604 ttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattctatct 16528700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 11313644 - 11313740
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||| |||| |||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  11313644 ttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaattctatct 11313740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 12442254 - 12442158
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||| ||||||||||||| ||||||||| |||       |||||||||| | |||||||||||||||||||||||||||||| ||| |||||    
T  12442254 ttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacatct 12442158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 26523261 - 26523165
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| ||||||||||||||||||||||| | |||||| |||||||||    
T  26523261 ttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattccatct 26523165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 400
Target Start/End: Complemental strand, 41093171 - 41093080
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    ||||||||||||||||||||||| ||||||||| |||       | ||| |||| |||||||||||||||||||||||||||||||| ||||    
T  41093171 ttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaattc 41093080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 400
Target Start/End: Complemental strand, 41092991 - 41092901
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattc 400  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  41092991 ttattaattttgttaggtctgcatcaatttaacctaatttatt-ccgctcttttgctttattaggtttgcaattatttaacctaacaaattc 41092901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 11313983 - 11314080
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnn-ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||        |||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  11313983 ttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattccatct 11314080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 9488171 - 9488075
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       ||| | |||| ||||||||| |||||||||||||||||||||| ||| |||||    
T  9488171 ttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttcatct 9488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 16529139 - 16529235
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||        ||||||||| ||||||||| |||||||||||||||| ||||| |||||||||    
T  16529139 ttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattccatct 16529235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 19121911 - 19122007
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |  ||||||| ||||||||||||||||||| |||||||||||| |||| ||||    
T  19121911 ttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaaattctatct 19122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 19122247 - 19122343
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       || ||||||| ||||||||||||||||||| |||||||||||| |||| ||||    
T  19122247 ttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaaattctatct 19122343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 24351573 - 24351477
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| |||||||||||  |||||||| |||       ||||||||||  ||||||||||||||||||||||||||||||| ||| |||||    
T  24351573 ttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatct 24351477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 26523357 - 26523271
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||||| ||||||||| |||       ||||| |||| ||||||||||||||||||||||| ||||||||    
T  26523357 ttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaaca 26523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 35159708 - 35159793
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||||| ||||||||| ||        |||||||||| ||||||||||||||||||||||||||||||||    
T  35159708 ttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 35159793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 403
Target Start/End: Original strand, 16526207 - 16526296
Alignment:
Q  314 aattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    |||||||||| ||||||| ||||||||| |||        | ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  16526207 aattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaattccat 16526296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 7127563 - 7127659
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||| ||||||||| |||       | |||||||| ||| ||||||||||||||||||||| |||||| |||||||||    
T  7127563 ttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaattccatct 7127659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 24326541 - 24326609
Alignment:
Q  321 ttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaac 389  Q
    ||||||||||||||||||||| |||       |||||||||| ||||||||||||||||||||||||||    
T  24326541 ttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 24350800 - 24350732
Alignment:
Q  321 ttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaac 389  Q
    ||||||||||||||||||||| |||       |||||||||| ||||||||||||||||||||||||||    
T  24350800 ttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 24351354 - 24351286
Alignment:
Q  321 ttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaac 389  Q
    ||||||||||||||||||||| |||       |||||||||| ||||||||||||||||||||||||||    
T  24351354 ttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 43395009 - 43394959
Alignment:
Q  355 gctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  43395009 gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 43394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 7673321 - 7673224
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnncc-gctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| ||||||||| |||       || | ||||||  ||||||||||||||||||||||||||||||| ||| |||||    
T  7673321 ttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatttcatct 7673224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 16305394 - 16305446
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||||||||||||||||||| |||| | |||||||||    
T  16305394 ccgctcatttgctttattaggtttgcaattatttaatctaataaattccatct 16305446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 16528963 - 16529047
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||||| ||||||||| |||       | |||||||| | ||||||||||||||||||||||||||||||    
T  16528963 ttattaattttgttacgtctgcagcaatttaacctaattttc--ctgctcatttgccttattaggtttgcaattatttaacctaaca 16529047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 24350976 - 24350924
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||| |||||    
T  24350976 ccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatct 24350924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 16528793 - 16528881
Alignment:
Q  317 tttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| ||||||| ||||||||| |||       |||||||||| | ||||||||||||||| ||||||||||||||  ||||||||    
T  16528793 tttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaacttccatct 16528881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 31486937 - 31486841
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||| ||||||||||||||||||||| |||       ||| |||||| || |||||||||  || | ||||||||||||| |||||||||    
T  31486937 ttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattccatct 31486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 31487185 - 31487089
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||||  |||||||| |||       |||||||||| || ||||||||| ||| | ||||||||||||| ||| |||||    
T  31487185 ttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttcatct 31487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 43395188 - 43395106
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatctnnnnnnnnntgcatcgcaccaatttcattc 435  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||| ||| |         |||||||||||||||||||||    
T  43395188 ccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcattc 43395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 14166285 - 14166190
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaa-nnnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    |||||||||||||||||||||||  ||||||||||||         |  |||||| |||||||| ||||||||||||||||||||||| |||||||    
T  14166285 ttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaattccat 14166190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 23138036 - 23138131
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||| || |||||| |||       |||||||||| ||||||||||||||||||||| |||| |||||  ||||||||    
T  23138036 ttattaatttcgttaggtctgcagcattttaacctaatttttt-ccgctcatttgctttattaggtttgcaattatataacgtaacaagttccatct 23138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 35159423 - 35159517
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| || |||||||||||||| |||       ||| || ||| |||||||||||||||||||||||||||||||  |||||||||    
T  35159423 ttattaattttgttacgt-tgcaacaatttaacctaatttttc-ccgttcttttgctttattaggtttgcaattatttaacctaaccaattccatct 35159517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 3081322 - 3081362
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaacccc 57  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  3081322 atattaaatttaaagaattcatataaaccctctcaaacccc 3081362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 38268884 - 38268916
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    |||||||||||||||||||||||||||||||||    
T  38268884 ttattaattttgttaggtctgcaacaatttaac 38268916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 2679878 - 2679907
Alignment:
Q  19 attaaatttaaagaattcatataaaccttt 48  Q
    ||||||||||||||||||||||||||||||    
T  2679878 attaaatttaaagaattcatataaaccttt 2679907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 39429032 - 39428971
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| |||||||||||||||| || ||||||| |  |||| ||||||| ||||||    
T  39429032 atattaaatttgaagaattcatataaactttctcaaaccacccaaaaccctcctctaataca 39428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 405
Target Start/End: Original strand, 9828925 - 9829019
Alignment:
Q  311 attaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||  |||||| |||||||||||||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  9828925 attaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 9829019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 17201601 - 17201697
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||||||||||||| |||       ||||||||||  ||||||||||||||||||||||||||||||| ||| |||||    
T  17201601 ttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatct 17201697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 27579602 - 27579698
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||| |||||||||||||||||| |||       || ||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  27579602 ttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcaatct 27579698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 23622222 - 23622308
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    |||||||||||||||||||||||| |||||||| |||       || ||||||| ||||||||||||||||||||||||||||||||    
T  23622222 ttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaaca 23622308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 25068192 - 25068278
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| ||||||||||||||||||||||||||||||||    
T  25068192 ttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 25068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 23610436 - 23610532
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnncc-gctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||||| |||       || |||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  23610436 ttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaattccatct 23610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 17202854 - 17202950
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||||||| ||||||||| |||       |||| ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  17202854 ttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattccatct 17202950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 17906902 - 17906806
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       | |||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  17906902 ttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattccatct 17906806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 4811164 - 4811068
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||| ||||||||| ||||||| ||||||||| |||       |||||| ||| |||||||||||||||||||||||||||||||  |||||||||    
T  4811164 ttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattccatct 4811068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 32208509 - 32208413
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaatta-tttaacctaacacattccatct 405  Q
    |||||||||||| |||||||||||||||||||  |||       |||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  32208509 ttattaattttgctaggtctgcaacaatttaatctaatttttt-ccgctcatttgctttattaggtttgcaattattttaacctaacaaattccatct 32208413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 2502356 - 2502417
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| ||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  2502356 atattaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaataca 2502417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 405
Target Start/End: Original strand, 808834 - 808930
Alignment:
Q  310 tattaattttgttaggtctgcaacaatttaacttaannnnnnnccg-ctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||||||| ||||||||| |||       ||  ||||||| ||||||||||||||||||||||||||| |||| ||| |||||    
T  808834 tattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcatct 808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 17202680 - 17202731
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  17202680 cgctcatttgctttattaggtttgcaattatttaatctaacaaattccatct 17202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 405
Target Start/End: Original strand, 25067969 - 25068062
Alignment:
Q  312 ttaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||  |||||| ||||||||| |||       |||||||||| |||||| ||||||||||||||||||| ||||| ||| |||||    
T  25067969 ttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattacatct 25068062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 15130903 - 15130995
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattcc 401  Q
    ||||||||||||||| ||||||| ||| ||||| |||       || ||||||  ||||||||| |||||||||||||||||||||| |||||    
T  15130903 ttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaattcc 15130995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 4100420 - 4100320
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcattta----ctttattaggtttgcaattatttaacctaacacattccatc 404  Q
    ||||||||||||||||||||||| ||||||||| |||       ||| ||||| |    |||||||| |||||||||||||||| |||||| ||||||||    
T  4100420 ttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaattccatc 4100321  T
Q  405 t 405  Q
    |    
T  4100320 t 4100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 27315340 - 27315386
Alignment:
Q  359 atttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||    
T  27315340 atttgctttattaggtttgcaattatttaacctaacaaattcaatct 27315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 4089387 - 4089493
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| ||||| || |||||||  || |||| |||  |||||||| ||||||||||       |||||  |||||||| |||||||||||||||    
T  4089387 atattaaatttgaagaaatcgtataaactcttccaaagcccccaaaatccttctccaatacaatttcttagttcctcaaatgaggagagttttatatttt 4089486  T
Q  117 gaagaaa 123  Q
    |||||||    
T  4089487 gaagaaa 4089493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 8674478 - 8674509
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaa 340  Q
    ||||||||||||||||||||||||||||||||    
T  8674478 ttattaattttgttaggtctgcaacaatttaa 8674509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 340
Target Start/End: Original strand, 8685157 - 8685188
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaa 340  Q
    ||||||||||||||||||||||||||||||||    
T  8685157 ttattaattttgttaggtctgcaacaatttaa 8685188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 405
Target Start/End: Complemental strand, 26832568 - 26832522
Alignment:
Q  359 atttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||| |||||||||||||||||||||||||| ||||| ||| |||||    
T  26832568 atttgctttattaggtttgcaattatttaacttaacaaattacatct 26832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 29201562 - 29201624
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttatta 371  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| ||||||||    
T  29201562 ttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttatta 29201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 4125751 - 4125719
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||||||||||||||||||| |||||||||    
T  4125751 ttattaattttgttaggtctgcagcaatttaac 4125719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 437
Target Start/End: Original strand, 13096 - 13224
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatctnnn 408  Q
    |||||||||| ||| |||||||||||||||||| |||       ||||||||||  |||||||||||||| |||||||||||||||| |||||||||       
T  13096 ttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattccatctaaa 13195  T
Q  409 nnnnnntgcatcgcaccaatttcattcat 437  Q
          |||||||||||||||||||||||    
T  13196 aacaaatgcatcgcaccaatttcattcat 13224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 13302 - 13351
Alignment:
Q  356 ctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||| |||||    
T  13302 ctcatttgctttattagggttgcaattatttaacctaacaaatttcatct 13351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 163904 - 163808
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| ||        |||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  163904 ttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattccatct 163808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28611910 - 28611814
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  28611910 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttccatct 28611814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28612123 - 28612039
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||||||||||||||||||||| |||       | |||||||| ||||||||||||||||||||||||||||||    
T  28612123 ttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaa 28612039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28612335 - 28612239
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| | |||| ||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  28612335 ttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatct 28612239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 41326373 - 41326457
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||  ||||||| |||||||||||||||||||||    
T  41326373 ttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaa 41326457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 10129599 - 10129515
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||||||||||| ||||||||| |||        ||||||||| ||||||||||||||||||||||||||||||    
T  10129599 ttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaa 10129515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 12898027 - 12898123
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||| | |       ||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  12898027 ttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattccatct 12898123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 41995855 - 41995759
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||| ||||||||||| |||       | | |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  41995855 ttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattccatct 41995759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 12896528 - 12896434
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccat 403  Q
    ||||||||||||||| |||| ||||||||||||||||       ||||||||||  |||||||||||||||||||||||| |||| | |||||||    
T  12896528 ttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaataaattccat 12896434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28612757 - 28612663
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||| ||||||||||||||| |||       |||||||||  |||||||||||||||||||||||||||||||| ||| |||||    
T  28612757 ttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcattg-ctttattaggtttgcaattatttaacctaacaaatttcatct 28612663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 44256477 - 44256561
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||||||||||| ||||||||| |||       |||||||||| ||||||||||||| ||| ||||||||||||    
T  44256477 ttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaa 44256561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 44543817 - 44543733
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||| ||| ||||||||||||| |||       |||||||||| ||||||| ||||||||||||||||||||||    
T  44543817 ttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaa 44543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 29550137 - 29550237
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttat----taggtttgcaattatttaacctaacacattccatc 404  Q
    ||||||||||| ||||||||||||||||||||| |||       |||||||||| ||||||    |||||||||||||||||||||||||| |||| |||    
T  29550137 ttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaattcaatc 29550236  T
Q  405 t 405  Q
    |    
T  29550237 t 29550237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 627541 - 627627
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    ||||||||||||||| || |||| ||||||||| |||       |||||||||||||||||||  ||||||||||||||||||||||    
T  627541 ttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaaca 627627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 9087455 - 9087561
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| ||||||||||||||||  |  ||||||||  ||||||||||||| |||||       ||||| ||||||||| || ||||||||||||    
T  9087455 atattaaatttgaagaattcatataaactctcccaaaccccccaaaatcctcctccgatacaatttttcagttccccaaatgaggagggttttatatttt 9087554  T
Q  117 gaagaaa 123  Q
    |||||||    
T  9087555 gaagaaa 9087561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 31584756 - 31584862
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||| ||||| |       ||||| ||||||||| || ||||||||||||    
T  31584756 atattaaatttgaagacttcatataaaccctctcaaaccccccaaaatcctccttcaatataattttttagttccccaaatgaggagggttttatatttt 31584855  T
Q  117 gaagaaa 123  Q
    |||||||    
T  31584856 gaagaaa 31584862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 5001757 - 5001705
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  5001757 ccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 5001705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 11735914 - 11736009
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||||| |||| ||||||||| |||       |||||||||| ||| || ||||||||||||||||||||||||| ||| |||||    
T  11735914 ttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatct 11736009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28612547 - 28612464
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||||||||||| ||||||||||||||| |||       | |||||||| |||||||||||||||||||| |||||||||    
T  28612547 ttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaa 28612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 29549795 - 29549879
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    |||| ||||||||||||||| |||| ||||||||||        |||||||||| ||||||||||||| ||||||||||||||||    
T  29549795 ttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaa 29549879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 5013298 - 5013219
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaa 388  Q
    ||||||||||||||| ||||||| ||||||||| |||       |||||||||| ||||||||||||| |||||||||||    
T  5013298 ttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaa 5013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 11522170 - 11522269
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaatacannnnnnnagttctccaaatgagaagagttttatatttt 116  Q
    ||||||||||| ||||||||||||||||| |  ||||||||  |||| ||||||||||||||       ||||| ||||||||| || ||||||||||||    
T  11522170 atattaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaatacaactttttagttccccaaatgaggagggttttatatttt 11522269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 28612971 - 28612874
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattagg-tttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||||||||||||||||||||| |||        || ||||||  ||||||||| ||| ||||||||||| |||||| |||||||||    
T  28612971 ttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattccatct 28612874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 627629 - 627676
Alignment:
Q  358 catttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatct 627676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 3249901 - 3249805
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||||||||||||| |||       ||||| |||| || ||||||||| ||| | ||||||||||||| ||| |||||    
T  3249901 ttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttcatct 3249805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 5001431 - 5001392
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5001431 cgctcatttgctttattaggtttgcaattatttaacctaa 5001392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 5013101 - 5013062
Alignment:
Q  354 cgctcatttactttattaggtttgcaattatttaacctaa 393  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5013101 cgctcatttgctttattaggtttgcaattatttaacctaa 5013062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 37131589 - 37131494
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||| |||||| ||||||||| |||       || ||||||| |||||||| ||||||||||||||||| ||||| ||| |||||    
T  37131589 ttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaatttcatct 37131494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 44544028 - 44543932
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||| ||||||||||||| |||       || ||||||| | |||||| ||||| ||||||||||||||| | |||||||||    
T  44544028 ttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattccatct 44543932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 22101687 - 22101630
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaata 76  Q
    ||||||||| ||||||||||||||||||| |||||| || ||||| |||| |||||||    
T  22101687 attaaatttgaagaattcatataaaccttctcaaactccctaaaaccctcatccaata 22101630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 11736349 - 11736401
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||| || ||||||||||||||||||||||||| ||| |||||    
T  11736349 ccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatct 11736401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 19640359 - 19640407
Alignment:
Q  357 tcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| |||||| |||||||||||||||||||||| | |||||||||    
T  19640359 tcatttattttattgggtttgcaattatttaacctaataaattccatct 19640407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 19838952 - 19839000
Alignment:
Q  357 tcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||| |||||| |||||||||||||||||||||| | |||||||||    
T  19838952 tcatttattttattgggtttgcaattatttaacctaataaattccatct 19839000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 39205106 - 39205047
Alignment:
Q  19 attaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||| ||||||||||||||||| |   ||| ||| ||||||||||||||||||||    
T  39205106 attaaatttcaagaattcatataaaccctccaaaaacccctaaaatcctcctccaataca 39205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 27987674 - 27987634
Alignment:
Q  98 gagaagagttttatattttgaag--aaataagcccccaaag 136  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  27987674 gagaagagttttatattttgaagaaaaataagcccccaaag 27987634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 28074207 - 28074167
Alignment:
Q  98 gagaagagttttatattttgaag--aaataagcccccaaag 136  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  28074207 gagaagagttttatattttgaagaaaaataagcccccaaag 28074167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 2132305 - 2132273
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaac 341  Q
    ||||||| |||||||||||||||||||||||||    
T  2132305 ttattaagtttgttaggtctgcaacaatttaac 2132273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 6347941 - 6347992
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| ||| |||||    
T  6347941 ccgctcatttgctttattag-tttacaattatttaacctaacaaatttcatct 6347992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 395
Target Start/End: Complemental strand, 12487 - 12401
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaaca 395  Q
    |||||||||||||||||| |||| ||||||||| |||       ||||||||||  |||||||||||||||||||||||||||||||    
T  12487 ttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaaca 12401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 102751 - 102803
Alignment:
Q  353 ccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  102751 ccgctcatttgctttattaagtttgcaattatttaacctaacaaattccatct 102803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 1636 - 1539
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaa-cttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    ||||||||||||||| ||||||| |||||||| || ||       || ||||||| |||||||| ||||||||||||||||||||| | |||||||||    
T  1636 ttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattccatct 1539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 14682 - 14586
Alignment:
Q  309 ttattaattttgttaggtctgcaacaatttaacttaannnnnnnccgctcatttactttattaggtttgcaattatttaacctaacacattccatct 405  Q
    |||||||||||||||  | |||| |||||||||||||        |||||||||  |||||||| |||||||||||||||||||||| |||| ||||    
T  14682 ttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaattctatct 14586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 9395 - 9456
Alignment:
Q  17 atattaaatttaaagaattcatataaaccttttcaaaccccataaaatcctcctccaataca 78  Q
    ||||||||||| ||||||||||||||||| | ||||| |||  |||| ||||||||| ||||    
T  9395 atattaaatttgaagaattcatataaaccctctcaaagcccccaaaaccctcctccagtaca 9456  T

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Target: scaffold0648 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 7429 - 7457
Alignment:
Q  16 aatattaaatttaaagaattcatataaac 44  Q
    |||||||||||||||||||||||||||||    
T  7429 aatattaaatttaaagaattcatataaac 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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