View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7894_low_29 (Length: 316)

Name: NF7894_low_29
Description: NF7894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7894_low_29
NF7894_low_29
[»] chr5 (45 HSPs)
chr5 (109-297)||(10733236-10733424)
chr5 (109-297)||(29348131-29348319)
chr5 (109-297)||(29350604-29350792)
chr5 (109-297)||(42245661-42245849)
chr5 (109-297)||(29345650-29345846)
chr5 (112-297)||(265064-265258)
chr5 (109-297)||(20908681-20908878)
chr5 (109-229)||(39363084-39363196)
chr5 (109-232)||(31143957-31144074)
chr5 (185-297)||(39244889-39245002)
chr5 (109-230)||(2155000-2155105)
chr5 (231-297)||(11581496-11581563)
chr5 (231-297)||(14047921-14047988)
chr5 (231-297)||(2154910-2154976)
chr5 (231-297)||(29329734-29329800)
chr5 (239-297)||(36155039-36155098)
chr5 (231-271)||(10775955-10775995)
chr5 (231-297)||(22411986-22412052)
chr5 (231-292)||(32027193-32027254)
chr5 (231-286)||(20918254-20918309)
chr5 (231-273)||(14047965-14048008)
chr5 (231-273)||(36155019-36155062)
chr5 (185-230)||(26733120-26733166)
chr5 (234-273)||(18319270-18319310)
chr5 (234-273)||(24066993-24067033)
chr5 (191-230)||(23202861-23202900)
chr5 (188-230)||(23469549-23469592)
chr5 (185-230)||(15796166-15796212)
chr5 (232-269)||(21309060-21309098)
chr5 (185-230)||(21732259-21732304)
chr5 (185-230)||(21809910-21809955)
chr5 (185-230)||(26740976-26741022)
chr5 (231-271)||(265046-265087)
chr5 (231-271)||(2154892-2154933)
chr5 (231-271)||(11581478-11581519)
chr5 (191-231)||(16227522-16227563)
chr5 (235-271)||(17874987-17875024)
chr5 (231-271)||(20908855-20908896)
chr5 (235-271)||(22412033-22412070)
chr5 (231-271)||(29345823-29345864)
chr5 (231-271)||(29348296-29348337)
chr5 (231-271)||(29350769-29350810)
chr5 (231-271)||(39244979-39245020)
chr5 (231-271)||(42245643-42245684)
chr5 (185-230)||(25743507-25743554)
[»] chr3 (68 HSPs)
chr3 (109-297)||(16454577-16454765)
chr3 (109-297)||(55500620-55500808)
chr3 (109-297)||(7781605-7781801)
chr3 (109-297)||(17462847-17463044)
chr3 (109-297)||(34158995-34159192)
chr3 (109-297)||(10248019-10248199)
chr3 (109-297)||(9707903-9708099)
chr3 (109-297)||(45607203-45607384)
chr3 (112-297)||(13152087-13152265)
chr3 (112-297)||(13154552-13154730)
chr3 (161-297)||(28848907-28849043)
chr3 (156-297)||(15977236-15977378)
chr3 (185-297)||(45578134-45578247)
chr3 (161-297)||(6469426-6469563)
chr3 (109-229)||(55476191-55476303)
chr3 (141-231)||(29172969-29173059)
chr3 (231-297)||(36166396-36166463)
chr3 (149-230)||(21618184-21618266)
chr3 (231-296)||(8898894-8898959)
chr3 (149-230)||(36166290-36166372)
chr3 (231-297)||(16283107-16283173)
chr3 (231-293)||(41123690-41123752)
chr3 (231-280)||(21618290-21618340)
chr3 (231-271)||(38962170-38962210)
chr3 (231-293)||(17446954-17447016)
chr3 (231-297)||(29172880-29172946)
chr3 (185-230)||(9577449-9577495)
chr3 (174-230)||(15206668-15206725)
chr3 (231-271)||(24153443-24153484)
chr3 (232-280)||(43890068-43890116)
chr3 (232-271)||(14507824-14507864)
chr3 (232-271)||(15932546-15932586)
chr3 (232-271)||(17548607-17548647)
chr3 (232-271)||(40806916-40806956)
chr3 (232-271)||(41173411-41173451)
chr3 (110-145)||(29173072-29173107)
chr3 (185-230)||(12377703-12377749)
chr3 (185-230)||(13919110-13919156)
chr3 (185-230)||(15245761-15245807)
chr3 (185-230)||(15264882-15264928)
chr3 (232-269)||(17538050-17538088)
chr3 (232-269)||(22307654-22307692)
chr3 (185-230)||(32404482-32404527)
chr3 (231-271)||(6469408-6469449)
chr3 (231-271)||(10248001-10248042)
chr3 (231-271)||(13152069-13152110)
chr3 (231-271)||(13154534-13154575)
chr3 (231-271)||(15977355-15977396)
chr3 (231-271)||(16283089-16283130)
chr3 (231-271)||(16454559-16454600)
chr3 (231-271)||(17446932-17446973)
chr3 (231-271)||(17463021-17463062)
chr3 (232-280)||(18700758-18700806)
chr3 (231-271)||(28848889-28848930)
chr3 (231-271)||(29172862-29172903)
chr3 (231-271)||(34159169-34159210)
chr3 (231-271)||(36166440-36166481)
chr3 (231-271)||(45578116-45578157)
chr3 (231-271)||(45607185-45607226)
chr3 (231-271)||(55500785-55500826)
chr3 (232-271)||(5206695-5206735)
chr3 (232-271)||(5214838-5214878)
chr3 (232-271)||(9707885-9707925)
chr3 (232-271)||(13031817-13031857)
chr3 (232-271)||(17520062-17520102)
chr3 (232-271)||(17534859-17534899)
chr3 (232-271)||(30175606-30175646)
chr3 (232-271)||(40811731-40811771)
[»] chr7 (69 HSPs)
chr7 (109-297)||(16409737-16409925)
chr7 (109-297)||(26356255-26356443)
chr7 (109-297)||(26358707-26358895)
chr7 (109-297)||(41522594-41522783)
chr7 (109-297)||(41525056-41525245)
chr7 (109-297)||(32125168-32125357)
chr7 (109-297)||(455999-456187)
chr7 (109-297)||(14949418-14949614)
chr7 (109-297)||(20385419-20385615)
chr7 (109-297)||(11972165-11972362)
chr7 (109-297)||(15377009-15377206)
chr7 (109-297)||(21189891-21190088)
chr7 (109-297)||(24701924-24702104)
chr7 (109-297)||(24704374-24704554)
chr7 (109-297)||(16232189-16232386)
chr7 (111-297)||(27216546-27216726)
chr7 (109-297)||(11393583-11393760)
chr7 (149-295)||(18639988-18640136)
chr7 (167-250)||(18423425-18423508)
chr7 (231-297)||(48273190-48273257)
chr7 (231-285)||(15082189-15082243)
chr7 (231-297)||(20110354-20110421)
chr7 (231-285)||(29329185-29329240)
chr7 (249-297)||(18427350-18427398)
chr7 (185-229)||(10064143-10064187)
chr7 (231-271)||(15082160-15082200)
chr7 (185-231)||(42461692-42461739)
chr7 (208-266)||(1543493-1543554)
chr7 (185-230)||(38519115-38519161)
chr7 (231-271)||(20110398-20110439)
chr7 (232-280)||(38227304-38227352)
chr7 (231-271)||(44116351-44116392)
chr7 (232-271)||(8852257-8852297)
chr7 (232-271)||(11066388-11066428)
chr7 (232-271)||(12371264-12371304)
chr7 (187-230)||(16995967-16996011)
chr7 (232-271)||(18075577-18075617)
chr7 (232-271)||(20619205-20619245)
chr7 (232-271)||(32300921-32300961)
chr7 (188-230)||(9033642-9033685)
chr7 (231-273)||(17062153-17062196)
chr7 (185-230)||(131148-131193)
chr7 (185-230)||(11525896-11525941)
chr7 (232-269)||(13150672-13150710)
chr7 (185-230)||(17017749-17017795)
chr7 (231-271)||(11393565-11393606)
chr7 (231-271)||(11972339-11972380)
chr7 (232-268)||(14183655-14183692)
chr7 (231-271)||(14949400-14949441)
chr7 (231-271)||(15376991-15377032)
chr7 (231-271)||(16409902-16409943)
chr7 (231-271)||(18427375-18427416)
chr7 (231-271)||(18456647-18456688)
chr7 (231-271)||(20385401-20385442)
chr7 (231-271)||(21189873-21189914)
chr7 (231-271)||(24702081-24702122)
chr7 (231-271)||(24704531-24704572)
chr7 (231-271)||(27216703-27216744)
chr7 (231-271)||(29329155-29329196)
chr7 (231-271)||(32125334-32125375)
chr7 (231-271)||(41522760-41522801)
chr7 (231-271)||(41525222-41525263)
chr7 (185-228)||(9390184-9390228)
chr7 (232-271)||(13150628-13150668)
chr7 (231-270)||(26356238-26356278)
chr7 (231-270)||(26358690-26358730)
chr7 (232-271)||(32434681-32434721)
chr7 (232-271)||(36686292-36686332)
chr7 (232-271)||(48811757-48811797)
[»] chr6 (49 HSPs)
chr6 (109-297)||(12741995-12742183)
chr6 (109-294)||(1541210-1541395)
chr6 (109-297)||(33861464-33861660)
chr6 (109-297)||(26924936-26925132)
chr6 (109-297)||(18334888-18335085)
chr6 (109-297)||(19004715-19004912)
chr6 (109-297)||(24422216-24422413)
chr6 (109-297)||(33863947-33864144)
chr6 (109-295)||(8054698-8054893)
chr6 (109-297)||(2291476-2291673)
chr6 (109-280)||(22781941-22782120)
chr6 (136-297)||(19859215-19859378)
chr6 (109-230)||(25591120-25591249)
chr6 (109-230)||(25688245-25688358)
chr6 (109-165)||(25656472-25656528)
chr6 (231-297)||(1595349-1595415)
chr6 (167-230)||(25714170-25714233)
chr6 (185-230)||(25656524-25656569)
chr6 (109-165)||(25714136-25714192)
chr6 (234-297)||(16448783-16448847)
chr6 (231-297)||(20557189-20557255)
chr6 (231-297)||(25714257-25714323)
chr6 (185-230)||(17229985-17230031)
chr6 (185-230)||(17742939-17742985)
chr6 (231-272)||(25688382-25688424)
chr6 (231-272)||(25714300-25714342)
chr6 (231-271)||(20557171-20557212)
chr6 (185-228)||(20136415-20136459)
chr6 (185-228)||(22196410-22196454)
chr6 (231-273)||(16448763-16448806)
chr6 (185-230)||(16492893-16492938)
chr6 (185-230)||(18896640-18896685)
chr6 (232-285)||(27573358-27573411)
chr6 (185-230)||(35007894-35007939)
chr6 (231-271)||(1595392-1595433)
chr6 (231-271)||(12742160-12742201)
chr6 (232-280)||(17743009-17743057)
chr6 (231-271)||(18334870-18334911)
chr6 (231-271)||(19004889-19004930)
chr6 (231-271)||(19859197-19859238)
chr6 (231-271)||(24422390-24422431)
chr6 (231-271)||(26924918-26924959)
chr6 (231-271)||(33861637-33861678)
chr6 (231-271)||(33864121-33864162)
chr6 (232-271)||(16133728-16133768)
chr6 (185-230)||(18178001-18178048)
chr6 (232-271)||(19444338-19444378)
chr6 (232-271)||(23017247-23017287)
chr6 (229-280)||(27573320-27573371)
[»] chr2 (58 HSPs)
chr2 (109-297)||(571074-571263)
chr2 (109-297)||(24905929-24906125)
chr2 (109-297)||(24908404-24908600)
chr2 (111-297)||(26507529-26507723)
chr2 (109-297)||(24900975-24901171)
chr2 (109-297)||(24903452-24903648)
chr2 (114-297)||(23135265-23135456)
chr2 (109-297)||(18808612-18808809)
chr2 (109-297)||(23709828-23710025)
chr2 (111-297)||(26505051-26505245)
chr2 (109-297)||(32039794-32039983)
chr2 (109-293)||(39681983-39682175)
chr2 (109-297)||(24898492-24898696)
chr2 (109-229)||(34402872-34402992)
chr2 (141-297)||(45030150-45030308)
chr2 (185-297)||(28576852-28576965)
chr2 (109-229)||(23130547-23130674)
chr2 (109-229)||(23133014-23133141)
chr2 (109-230)||(24529917-24530022)
chr2 (235-285)||(24367578-24367628)
chr2 (231-297)||(23712309-23712375)
chr2 (231-285)||(24529838-24529893)
chr2 (231-295)||(21155358-21155422)
chr2 (231-271)||(24367617-24367657)
chr2 (238-297)||(24643247-24643306)
chr2 (231-297)||(6725795-6725861)
chr2 (185-230)||(18547277-18547323)
chr2 (185-230)||(34136683-34136729)
chr2 (185-230)||(43947659-43947705)
chr2 (232-271)||(9974845-9974885)
chr2 (232-271)||(19202296-19202336)
chr2 (232-271)||(24435973-24436013)
chr2 (232-271)||(24781955-24781995)
chr2 (232-271)||(5032416-5032454)
chr2 (232-269)||(5032458-5032496)
chr2 (231-271)||(571240-571281)
chr2 (231-271)||(6725838-6725879)
chr2 (231-271)||(18808786-18808827)
chr2 (235-271)||(19202231-19202268)
chr2 (235-271)||(22500805-22500842)
chr2 (235-271)||(22508739-22508776)
chr2 (231-271)||(23135433-23135474)
chr2 (231-271)||(23709810-23709851)
chr2 (231-271)||(23712291-23712332)
chr2 (235-271)||(24865746-24865783)
chr2 (231-271)||(24898474-24898515)
chr2 (231-271)||(24900957-24900998)
chr2 (231-271)||(24903434-24903475)
chr2 (231-271)||(24905911-24905952)
chr2 (231-271)||(24908386-24908427)
chr2 (231-271)||(26505222-26505263)
chr2 (231-271)||(26507700-26507741)
chr2 (231-271)||(28576942-28576983)
chr2 (231-271)||(32039776-32039817)
chr2 (231-271)||(39682156-39682197)
chr2 (186-230)||(39828288-39828333)
chr2 (232-271)||(6478342-6478382)
chr2 (232-271)||(23969640-23969680)
[»] chr1 (37 HSPs)
chr1 (109-297)||(23594031-23594220)
chr1 (109-297)||(21923587-21923784)
chr1 (109-293)||(21475387-21475572)
chr1 (109-271)||(13988579-13988750)
chr1 (109-233)||(41372783-41372907)
chr1 (231-297)||(31612111-31612178)
chr1 (234-297)||(40388996-40389060)
chr1 (235-297)||(21711549-21711612)
chr1 (231-297)||(22123364-22123430)
chr1 (231-297)||(29297937-29298003)
chr1 (235-295)||(21707007-21707068)
chr1 (231-273)||(21711589-21711632)
chr1 (235-297)||(27161759-27161821)
chr1 (231-273)||(40389037-40389080)
chr1 (185-230)||(20316158-20316204)
chr1 (185-230)||(21043613-21043659)
chr1 (185-230)||(22118556-22118602)
chr1 (185-230)||(48520036-48520082)
chr1 (232-280)||(431559-431607)
chr1 (231-271)||(22123346-22123387)
chr1 (185-229)||(23967499-23967544)
chr1 (231-271)||(27161741-27161782)
chr1 (232-285)||(35088395-35088447)
chr1 (232-269)||(23967569-23967607)
chr1 (185-230)||(47190382-47190427)
chr1 (185-230)||(52954649-52954694)
chr1 (232-280)||(20316228-20316276)
chr1 (231-271)||(21475365-21475406)
chr1 (231-271)||(21923569-21923610)
chr1 (231-271)||(23594013-23594054)
chr1 (231-271)||(31612155-31612196)
chr1 (231-271)||(35088436-35088477)
chr1 (232-271)||(20587650-20587690)
chr1 (232-271)||(20592188-20592228)
chr1 (232-271)||(20634666-20634706)
chr1 (187-230)||(20957935-20957979)
chr1 (185-228)||(35982167-35982211)
[»] scaffold0230 (2 HSPs)
scaffold0230 (109-297)||(13624-13813)
scaffold0230 (231-271)||(13790-13831)
[»] scaffold0044 (2 HSPs)
scaffold0044 (109-297)||(40070-40266)
scaffold0044 (231-271)||(40243-40284)
[»] chr8 (41 HSPs)
chr8 (109-297)||(4542669-4542865)
chr8 (109-297)||(5853588-5853784)
chr8 (109-293)||(14823444-14823636)
chr8 (109-297)||(1484071-1484268)
chr8 (109-297)||(20402896-20403093)
chr8 (112-297)||(22001426-22001620)
chr8 (109-229)||(4482981-4483093)
chr8 (149-271)||(20046473-20046597)
chr8 (109-229)||(18678390-18678517)
chr8 (109-229)||(18717579-18717706)
chr8 (141-229)||(26225636-26225725)
chr8 (141-229)||(26219445-26219534)
chr8 (231-297)||(26225544-26225611)
chr8 (231-285)||(45291003-45291058)
chr8 (231-295)||(15203529-15203593)
chr8 (231-297)||(19896065-19896131)
chr8 (232-285)||(18833248-18833301)
chr8 (231-271)||(45290974-45291014)
chr8 (185-227)||(37515270-37515313)
chr8 (185-230)||(18833179-18833225)
chr8 (185-230)||(20502432-20502478)
chr8 (185-230)||(22253495-22253541)
chr8 (185-230)||(22963743-22963789)
chr8 (185-230)||(28397293-28397339)
chr8 (232-271)||(39937102-39937142)
chr8 (231-297)||(41597988-41598054)
chr8 (185-230)||(22382064-22382110)
chr8 (185-230)||(22525302-22525348)
chr8 (185-230)||(22984028-22984074)
chr8 (185-230)||(22995586-22995632)
chr8 (231-271)||(1484245-1484286)
chr8 (231-271)||(4542651-4542692)
chr8 (231-271)||(5853570-5853611)
chr8 (231-271)||(14823617-14823658)
chr8 (231-271)||(18833290-18833331)
chr8 (231-271)||(19896108-19896149)
chr8 (231-271)||(20403070-20403111)
chr8 (231-271)||(22001597-22001638)
chr8 (186-230)||(23667670-23667714)
chr8 (231-271)||(41598031-41598072)
chr8 (232-271)||(24713141-24713181)
[»] chr4 (43 HSPs)
chr4 (109-297)||(1837805-1837996)
chr4 (109-297)||(15118648-15118845)
chr4 (109-297)||(18239715-18239912)
chr4 (109-297)||(44614957-44615154)
chr4 (109-297)||(50222635-50222832)
chr4 (109-296)||(14718263-14718459)
chr4 (109-233)||(12033500-12033624)
chr4 (149-293)||(44773387-44773533)
chr4 (167-297)||(7641478-7641609)
chr4 (109-266)||(3514715-3514866)
chr4 (109-202)||(29267332-29267433)
chr4 (141-231)||(15355668-15355759)
chr4 (231-297)||(18215571-18215637)
chr4 (231-297)||(54799007-54799074)
chr4 (234-297)||(14280155-14280219)
chr4 (231-292)||(8575124-8575186)
chr4 (234-297)||(20149671-20149735)
chr4 (231-297)||(52312310-52312376)
chr4 (251-297)||(29267440-29267486)
chr4 (231-275)||(44102094-44102139)
chr4 (231-273)||(14280196-14280239)
chr4 (231-273)||(20149712-20149755)
chr4 (185-230)||(15791428-15791474)
chr4 (185-230)||(26045625-26045671)
chr4 (185-230)||(26050806-26050852)
chr4 (231-271)||(15355604-15355645)
chr4 (231-271)||(1837787-1837828)
chr4 (231-271)||(7641460-7641501)
chr4 (231-271)||(15118630-15118671)
chr4 (231-271)||(18215553-18215594)
chr4 (231-271)||(18239697-18239738)
chr4 (231-271)||(29267463-29267504)
chr4 (231-271)||(44615131-44615172)
chr4 (231-271)||(50222617-50222658)
chr4 (231-271)||(52312353-52312394)
chr4 (231-271)||(54798989-54799030)
chr4 (232-271)||(10357489-10357529)
chr4 (232-271)||(15042220-15042260)
chr4 (185-228)||(15098938-15098982)
chr4 (232-271)||(15112164-15112204)
chr4 (208-249)||(15869195-15869238)
chr4 (185-228)||(19736381-19736425)
chr4 (232-271)||(35812529-35812569)
[»] scaffold0134 (2 HSPs)
scaffold0134 (109-297)||(37491-37687)
scaffold0134 (231-271)||(37664-37705)
[»] scaffold0028 (9 HSPs)
scaffold0028 (109-297)||(136350-136546)
scaffold0028 (109-297)||(138819-139015)
scaffold0028 (109-297)||(143757-143953)
scaffold0028 (109-297)||(133881-134077)
scaffold0028 (109-297)||(141288-141484)
scaffold0028 (231-271)||(136523-136564)
scaffold0028 (231-271)||(138992-139033)
scaffold0028 (231-271)||(141461-141502)
scaffold0028 (231-271)||(143930-143971)
[»] scaffold0254 (2 HSPs)
scaffold0254 (109-297)||(20416-20613)
scaffold0254 (231-271)||(20590-20631)
[»] scaffold0023 (3 HSPs)
scaffold0023 (109-297)||(94080-94277)
scaffold0023 (231-297)||(44254-44320)
scaffold0023 (231-271)||(94254-94295)
[»] scaffold0444 (2 HSPs)
scaffold0444 (109-293)||(13061-13254)
scaffold0444 (231-271)||(13235-13276)
[»] scaffold0145 (2 HSPs)
scaffold0145 (109-297)||(9418-9614)
scaffold0145 (231-271)||(9591-9632)
[»] scaffold0003 (2 HSPs)
scaffold0003 (109-230)||(158795-158924)
scaffold0003 (231-271)||(158729-158770)
[»] scaffold0716 (1 HSPs)
scaffold0716 (109-266)||(4393-4553)
[»] scaffold0022 (2 HSPs)
scaffold0022 (231-297)||(116265-116332)
scaffold0022 (149-230)||(116154-116236)
[»] scaffold0013 (2 HSPs)
scaffold0013 (231-297)||(30137-30204)
scaffold0013 (231-271)||(30181-30222)
[»] scaffold0819 (2 HSPs)
scaffold0819 (231-285)||(4052-4106)
scaffold0819 (231-269)||(4095-4133)
[»] scaffold0122 (1 HSPs)
scaffold0122 (231-297)||(44960-45027)
[»] scaffold0142 (3 HSPs)
scaffold0142 (231-297)||(16620-16687)
scaffold0142 (231-297)||(16577-16643)
scaffold0142 (231-275)||(16664-16709)
[»] scaffold0697 (1 HSPs)
scaffold0697 (235-297)||(6406-6468)
[»] scaffold0853 (1 HSPs)
scaffold0853 (185-230)||(2995-3041)
[»] scaffold0485 (1 HSPs)
scaffold0485 (185-230)||(9915-9961)
[»] scaffold0396 (1 HSPs)
scaffold0396 (185-230)||(1637-1683)
[»] scaffold0347 (1 HSPs)
scaffold0347 (185-230)||(8633-8679)
[»] scaffold0293 (1 HSPs)
scaffold0293 (185-230)||(17247-17293)
[»] scaffold0192 (1 HSPs)
scaffold0192 (208-266)||(9677-9738)
[»] scaffold0040 (2 HSPs)
scaffold0040 (185-230)||(10882-10928)
scaffold0040 (185-230)||(103962-104006)
[»] scaffold0011 (1 HSPs)
scaffold0011 (185-230)||(38446-38492)
[»] scaffold0010 (2 HSPs)
scaffold0010 (185-230)||(6758-6804)
scaffold0010 (189-230)||(394-436)
[»] scaffold0001 (2 HSPs)
scaffold0001 (185-230)||(497206-497252)
scaffold0001 (232-271)||(76671-76711)
[»] scaffold0106 (1 HSPs)
scaffold0106 (231-271)||(15473-15514)
[»] scaffold0375 (1 HSPs)
scaffold0375 (232-271)||(9394-9434)
[»] scaffold0371 (1 HSPs)
scaffold0371 (232-271)||(2803-2843)
[»] scaffold0111 (3 HSPs)
scaffold0111 (232-271)||(7234-7274)
scaffold0111 (232-271)||(14353-14393)
scaffold0111 (235-271)||(14421-14458)
[»] scaffold0101 (1 HSPs)
scaffold0101 (234-273)||(1517-1557)
[»] scaffold0064 (1 HSPs)
scaffold0064 (232-271)||(57720-57760)
[»] scaffold0047 (1 HSPs)
scaffold0047 (232-271)||(78006-78046)
[»] scaffold0394 (1 HSPs)
scaffold0394 (231-285)||(11863-11917)
[»] scaffold0282 (1 HSPs)
scaffold0282 (185-231)||(12002-12049)
[»] scaffold0914 (1 HSPs)
scaffold0914 (185-230)||(1444-1490)
[»] scaffold0737 (1 HSPs)
scaffold0737 (232-269)||(6740-6778)
[»] scaffold0453 (1 HSPs)
scaffold0453 (185-230)||(2149-2195)
[»] scaffold0278 (1 HSPs)
scaffold0278 (185-230)||(10805-10850)
[»] scaffold0075 (2 HSPs)
scaffold0075 (208-262)||(8767-8824)
scaffold0075 (231-268)||(52248-52286)
[»] scaffold0061 (1 HSPs)
scaffold0061 (232-269)||(19513-19551)
[»] scaffold0036 (1 HSPs)
scaffold0036 (232-269)||(78446-78484)
[»] scaffold0006 (1 HSPs)
scaffold0006 (185-230)||(106064-106110)
[»] scaffold0413 (1 HSPs)
scaffold0413 (185-230)||(12314-12358)
[»] scaffold0021 (1 HSPs)
scaffold0021 (185-230)||(136715-136759)
[»] scaffold1633 (1 HSPs)
scaffold1633 (232-271)||(174-214)
[»] scaffold0188 (1 HSPs)
scaffold0188 (232-271)||(693-733)
[»] scaffold0117 (1 HSPs)
scaffold0117 (232-271)||(41281-41321)
[»] scaffold0080 (1 HSPs)
scaffold0080 (232-271)||(59645-59685)
[»] scaffold0058 (1 HSPs)
scaffold0058 (185-230)||(769-816)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 10733424 - 10733236
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10733424 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 10733325  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10733324 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 10733236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 29348131 - 29348319
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29348131 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29348230  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29348231 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 29348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 29350604 - 29350792
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29350604 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29350703  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29350704 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 29350792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 42245849 - 42245661
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42245849 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 42245750  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42245749 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 42245661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 29345650 - 29345846
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  29345650 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29345749  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29345750 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 29345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 265258 - 265064
Alignment:
Q  112 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaacttaat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  265258 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 265159  T
Q  204 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  265158 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 265064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 20908681 - 20908878
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  20908681 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20908780  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20908781 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 20908878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 39363084 - 39363196
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  39363084 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 39363175  T
Q  209 aatcatgcatgtggtaccaat 229  Q
    |||||||||||||||||||||    
T  39363176 aatcatgcatgtggtaccaat 39363196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 31143957 - 31144074
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaact--taatctt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||  |||||||    
T  31143957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttataatctt 31144048  T
Q  207 ctaatcatgcatgtggtaccaatctt 232  Q
    ||||||||||||||||||||||||||    
T  31144049 ctaatcatgcatgtggtaccaatctt 31144074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 185 - 297
Target Start/End: Original strand, 39244889 - 39245002
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  39244889 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccatgccatcaagcactcaactttatttgagcgta 39244988  T
Q  284 aaacggctcccagg 297  Q
    ||| |||| |||||    
T  39244989 aaaaggcttccagg 39245002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 2155105 - 2155000
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  2155105 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 2155022  T
Q  209 aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||    
T  2155021 aatcatgcatgtggtaccaatc 2155000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 11581563 - 11581496
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  11581563 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 11581496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 14047921 - 14047988
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  14047921 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 14047988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 2154976 - 2154910
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2154976 tttgagcataaataggctcccagggcatcaagccctcaactt-atttgagcgtaaaaaggctcccagg 2154910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 29329734 - 29329800
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||    
T  29329734 tttgagcgtaaataggctcccagggcatcaaaccctcaactt-atttgagcgtaaaaaggctcccagg 29329800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 36155098 - 36155039
Alignment:
Q  239 taaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  36155098 taaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 36155039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 10775995 - 10775955
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10775995 tttgagcgtaaataggctccagggcatcaagccctcaactt 10775955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 22411986 - 22412052
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||  ||||||||||    
T  22411986 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttattttagcgtaaataggctcccagg 22412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 32027193 - 32027254
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactttatttgagcgtaaaacggctc 292  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||    
T  32027193 tttgagcgtaaataggctctcagggcattaagccctcaac-ttatttgagcgtaaaaaggctc 32027254  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 20918309 - 20918254
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaa 286  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  20918309 tttgagcgtaaataggctcccagggcatcaagccctcaa-tttttttgagcgtaaaa 20918254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 14047965 - 14048008
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14047965 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 14048008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 36155062 - 36155019
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  36155062 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 36155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 26733166 - 26733120
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  26733166 cttgactatgcaacttaatcctcataatcatgcatgtggtaccaatc 26733120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 18319310 - 18319270
Alignment:
Q  234 gagcgtaaataggctc-cagggcatcaagccctcaacttta 273  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  18319310 gagcgtaaataggctctcagggcatcaagccctcaacttta 18319270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 273
Target Start/End: Original strand, 24066993 - 24067033
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24066993 gagcgtaaataggctcccagggcatcaagccctcaacttta 24067033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 23202900 - 23202861
Alignment:
Q  191 tatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  23202900 tatgcaacttcaacttctaatcatgcatgtggtaccaatc 23202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 23469549 - 23469592
Alignment:
Q  188 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  23469549 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 23469592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 15796166 - 15796212
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  15796166 cttgactatgcaactctatcttcttaatcatgcatgtggtaccaatc 15796212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 21309098 - 21309060
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21309098 ttgagcgtaaataggctcacagggcatcaagccctcaac 21309060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 21732304 - 21732259
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21732304 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21732259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 21809955 - 21809910
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21809955 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 26741022 - 26740976
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  26741022 cttgactatccaacttaatcctcttaatcatgcatgtggtaccaatc 26740976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 265087 - 265046
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  265087 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 265046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 2154933 - 2154892
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  2154933 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 2154892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 11581519 - 11581478
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  11581519 tttgagcgtaaataggctcccagggcatgaagccctcaactt 11581478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 16227522 - 16227563
Alignment:
Q  191 tatgcaacttaatcttct-aatcatgcatgtggtaccaatct 231  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  16227522 tatgcaacttaatcctcttaatcatgcatgtggtaccaatct 16227563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 17874987 - 17875024
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17874987 agcgtaaataggctcacagggcatcaagccctcaactt 17875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 20908855 - 20908896
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  20908855 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 20908896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 22412033 - 22412070
Alignment:
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||| |||||||||||||||||||||    
T  22412033 agcgtaaataggctcccagggcatcaagccctcaactt 22412070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 29345823 - 29345864
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  29345823 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 29345864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 29348296 - 29348337
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  29348296 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 29348337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 29350769 - 29350810
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  29350769 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 29350810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 39244979 - 39245020
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactt 271  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  39244979 tttgagcgtaaaaaggcttccagggcatcaagccctcaactt 39245020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 42245684 - 42245643
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  42245684 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 42245643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 25743507 - 25743554
Alignment:
Q  185 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  25743507 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 25743554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 16454765 - 16454577
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16454765 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 16454666  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16454665 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 16454577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 55500620 - 55500808
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  55500620 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgacaacttgacaacttaacttcttgactatgcaacttaatcttct 55500719  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  55500720 aatcatgcatgtggtaccaatctttgagcgtaaataggctctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 55500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 7781801 - 7781605
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  7781801 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataactggacaacttgacaacttaacctcttgactatgcaactt 7781702  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7781701 aatcttctaaacatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 7781605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 17462847 - 17463044
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  17462847 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 17462946  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17462947 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 17463044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 34158995 - 34159192
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  34158995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 34159094  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34159095 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 34159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 10248199 - 10248019
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  10248199 agaatcacagctttcaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 10248108  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10248107 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 10248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 9708099 - 9707903
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  9708099 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 9708000  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9707999 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaacttta-ttgagcgtaaaaaggctcccagg 9707903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 45607384 - 45607203
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  45607384 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 45607293  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45607292 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 45607203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 13152265 - 13152087
Alignment:
Q  112 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13152265 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13152174  T
Q  212 catgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13152173 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 13152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 13154730 - 13154552
Alignment:
Q  112 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13154730 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13154639  T
Q  212 catgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13154638 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 13154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 28849043 - 28848907
Alignment:
Q  161 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaa 260  Q
    ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28849043 cttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggctccagggcatcaa 28848944  T
Q  261 gccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28848943 gccctcaactttatttgagcgtaaaaaggctcccagg 28848907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 15977236 - 15977378
Alignment:
Q  156 gacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccaggg 254  Q
    ||||||| || |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15977236 gacaactcgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggctcccaggg 15977335  T
Q  255 catcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  15977336 catcaagccctcaactttatttgagcgtaaaaaggctcccagg 15977378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 45578247 - 45578134
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45578247 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgta 45578148  T
Q  284 aaacggctcccagg 297  Q
    ||| ||||||||||    
T  45578147 aaaaggctcccagg 45578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 161 - 297
Target Start/End: Complemental strand, 6469563 - 6469426
Alignment:
Q  161 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatca 259  Q
    ||||| |||| |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6469563 cttgacaactcgacaacttgacaacttgattatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccaggacatca 6469464  T
Q  260 agccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  6469463 agccctcaactttatttgagcgtaaaaaggctcccagg 6469426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 55476191 - 55476303
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  55476191 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 55476282  T
Q  209 aatcatgcatgtggtaccaat 229  Q
    |||||||||||||||||||||    
T  55476283 aatcatgcatgtggtaccaat 55476303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 29173059 - 29172969
Alignment:
Q  141 acaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 231  Q
    ||||||| |||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29173059 acaacttgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 29172969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 36166396 - 36166463
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36166396 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 36166463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 21618184 - 21618266
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21618184 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 21618266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 8898894 - 8898959
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccag 296  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  8898894 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaaaaggctcccag 8898959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 36166290 - 36166372
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||| ||||| ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36166290 acaacttgacaatcttgacaactcgacgacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 36166372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 16283173 - 16283107
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||    
T  16283173 tttgagcgtaaataggctcccagggcaacaagccctcaactt-atttgagcgtaaaaaggctcccagg 16283107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 41123690 - 41123752
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  41123690 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaaaaggctcc 41123752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 21618290 - 21618340
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21618290 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagc 21618340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 38962210 - 38962170
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38962210 tttgagcgtaaataggctccagggcatcaagccctcaactt 38962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 17447016 - 17446954
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||    
T  17447016 tttgagcgtaaataggctcccagggcatcaatccctcaac-ttatttgagcgtaaaaaggctcc 17446954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 29172946 - 29172880
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||  ||||||||||    
T  29172946 tttgaacgtaaataggctcccagggcatcaagccctcaac-ttatttgagtgtaaataggctcccagg 29172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 9577449 - 9577495
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9577449 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9577495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 15206668 - 15206725
Alignment:
Q  174 caacttaacctcttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||  |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15206668 caacttaacaacttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24153484 - 24153443
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  24153484 tttgagcgtaaataggctcccagggcatcaagccctcaactt 24153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 43890116 - 43890068
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43890116 ttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagc 43890068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 14507824 - 14507864
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  14507824 ttgagcgtaaataggctcacagggcatcaagccctcaactt 14507864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 15932586 - 15932546
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  15932586 ttgagcgtaaataggctcacagggcatcaagccctcaactt 15932546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 17548647 - 17548607
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  17548647 ttgagcgtaaataggctcacagggcatcaagccctcaactt 17548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 40806916 - 40806956
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  40806916 ttgagcgtaaataggctcacagggcatcaagccctcaactt 40806956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 41173451 - 41173411
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41173451 ttgagcgtaaataggctcacagggcatcaagccctcaactt 41173411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 29173107 - 29173072
Alignment:
Q  110 gaatcacagctttaaacaatttcatgatttaacaac 145  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29173107 gaatcacagctttaaacaatttcataatttaacaac 29173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 12377703 - 12377749
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  12377703 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 12377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 13919110 - 13919156
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  13919110 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 13919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 15245761 - 15245807
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15245761 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15245807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 15264882 - 15264928
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15264882 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 17538050 - 17538088
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17538050 ttgagcgtaaataggctcacagggcatcaagccctcaac 17538088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 22307692 - 22307654
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22307692 ttgagcgtaaataggctcacagggcatcaagccctcaac 22307654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 32404527 - 32404482
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32404527 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 32404482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 6469449 - 6469408
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  6469449 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 6469408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 10248042 - 10248001
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  10248042 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 10248001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 13152110 - 13152069
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  13152110 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 13152069  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 13154575 - 13154534
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  13154575 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 13154534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 15977355 - 15977396
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  15977355 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 15977396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 16283130 - 16283089
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  16283130 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 16283089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 16454600 - 16454559
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  16454600 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 16454559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 17446973 - 17446932
Alignment:
Q  231 tttgagcgtaaataggctcca-gggcatcaagccctcaactt 271  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  17446973 tttgagcgtaaaaaggctccaagggcatcaagccctcaactt 17446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 17463021 - 17463062
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  17463021 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 17463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 18700806 - 18700758
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  18700806 ttgagcgtaaataggctcccagggcatcaagacctcaac-ttatttgagc 18700758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 28848930 - 28848889
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  28848930 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 28848889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 29172903 - 29172862
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  29172903 tttgagtgtaaataggctcccagggcatcaagccctcaactt 29172862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 34159169 - 34159210
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  34159169 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 34159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 36166440 - 36166481
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  36166440 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 36166481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 45578157 - 45578116
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  45578157 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 45578116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 45607226 - 45607185
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  45607226 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 45607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 55500785 - 55500826
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  55500785 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 55500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 5206735 - 5206695
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  5206735 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 5206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 5214838 - 5214878
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  5214838 ttgaacgtaaataggctcacagggcatcaagccctcaactt 5214878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 9707925 - 9707885
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  9707925 ttgagcgtaaaaaggctcccagggcatcaagccctcaactt 9707885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 13031857 - 13031817
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  13031857 ttgagcgtaaataggctcacagggcatcaagcccttaactt 13031817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 17520102 - 17520062
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  17520102 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 17520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 17534899 - 17534859
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  17534899 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 17534859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 30175646 - 30175606
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  30175646 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 30175606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 40811731 - 40811771
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  40811731 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 40811771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 8e-98; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 16409737 - 16409925
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16409737 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaacttaacctcttgactatgcaacttaatcttct 16409836  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16409837 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 16409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 26356443 - 26356255
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26356443 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26356344  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26356343 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcacagg 26356255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 26358895 - 26358707
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26358895 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26358796  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26358795 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcacagg 26358707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 41522594 - 41522783
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522594 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41522693  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41522694 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 41522783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 41525056 - 41525245
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41525056 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41525155  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41525156 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 41525245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 32125168 - 32125357
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32125168 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 32125267  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32125268 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 32125357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 455999 - 456187
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  455999 agaatcacagctttaaacaatttcatgatttaacaacttaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 456098  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  456099 aatcatgcatgtggtaccaatctttgagcgtaaataggcttcagggcatcaagccctcaactttatttgagcgtaaaaaggatcccagg 456187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 14949614 - 14949418
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14949614 agaatcatagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14949515  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14949514 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 14949418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 20385615 - 20385419
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  20385615 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20385516  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20385515 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaaggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 20385419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 11972165 - 11972362
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  11972165 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 11972264  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11972265 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 11972362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 15377206 - 15377009
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15377206 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15377107  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  15377106 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 15377009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 21190088 - 21189891
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21190088 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21189989  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21189988 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 21189891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 24701924 - 24702104
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24701924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24702015  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24702016 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24702104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 24704374 - 24704554
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24704374 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24704465  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24704466 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24704554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 16232189 - 16232386
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  16232189 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 16232288  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16232289 aatcttctaatcatgcatgtggtaccaatctttaagcgtaaataggctcccagggcatcaagccctcaactttatttgagcctaaaaaggctcccagg 16232386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 27216546 - 27216726
Alignment:
Q  111 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctct--tgactatgcaacttaatcttct 208  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27216546 aatcacagctttaaacaatttcatgatttaacaactt--------gacaacttgataacttgacaacttaacctctcttgactatgcaacttaatcttct 27216637  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27216638 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 27216726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 11393760 - 11393583
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11393760 agaatcatagctttaaacaatttcatgatttaacaacttaacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 11393661  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11393660 aatcatgcatgtggtaccaatct-----------taggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 11393583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 18639988 - 18640136
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 247  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18639988 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 18640087  T
Q  248 t-ccagggcatcaagccctcaactttatttgagcgtaaaacggctccca 295  Q
    | |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18640088 tcccagggcatcaaaccctcaactttatttgagcgtaaaaaggctccca 18640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 18423425 - 18423508
Alignment:
Q  167 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc 250  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18423425 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc 18423508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 48273190 - 48273257
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  48273190 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 48273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 15082243 - 15082189
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaa 285  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15082243 tttgagcgtaaataggctccaaggcatcaagccctcaactttatttgagcgtaaa 15082189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 20110354 - 20110421
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||    
T  20110354 tttgagcgtaaataggctcccagggcatcaagccctaaactttatttgagcgtaaataggctcccagg 20110421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 29329240 - 29329185
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29329240 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaa 29329185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 18427350 - 18427398
Alignment:
Q  249 ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18427350 ccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 18427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 10064187 - 10064143
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 229  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10064187 cttgactatgcaacttaatcctctaatcatgcatgtggtaccaat 10064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 15082200 - 15082160
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15082200 tttgagcgtaaataggctccagggcatcaagccctcaactt 15082160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 42461692 - 42461739
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 231  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42461692 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatct 42461739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 1543554 - 1543493
Alignment:
Q  208 taatcatgcatgtggtaccaatc--tttgagcgtaaataggctcc-agggcatcaagccctc 266  Q
    |||||||||||||||||||||||   ||||||||||||||||||| || |||||||||||||    
T  1543554 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcctagagcatcaagccctc 1543493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 38519115 - 38519161
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38519115 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 38519161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 20110398 - 20110439
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20110398 tttgagcgtaaataggctcccagggcatcaagccctcaactt 20110439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 38227304 - 38227352
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  38227304 ttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagc 38227352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 44116351 - 44116392
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  44116351 tttgagcgtaaataggctcccagggcatcaagccctcaactt 44116392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 8852297 - 8852257
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  8852297 ttgagcgtaaataggctcacagggcatcaagccctcaactt 8852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 11066388 - 11066428
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11066388 ttgagcgtaaataggctcacagggcatcaagccctcaactt 11066428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 12371264 - 12371304
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  12371264 ttgagcgtaaataggctcacagggcatcaagccctcaactt 12371304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 16995967 - 16996011
Alignment:
Q  187 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  16995967 tgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 16996011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 18075617 - 18075577
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  18075617 ttgagcgtaaataggctcacagggcatcaagccctcaactt 18075577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 20619205 - 20619245
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20619205 ttgagcgtaaataggctcacagggcatcaagccctcaactt 20619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 32300921 - 32300961
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  32300921 ttgagcgtaaataggctcccagggcatcaagccctcaactt 32300961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 9033685 - 9033642
Alignment:
Q  188 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  9033685 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9033642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 17062196 - 17062153
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  17062196 tttgatcgtaaataggctcccagggcatcaagccctcaacttta 17062153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 131193 - 131148
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  131193 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 131148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 11525941 - 11525896
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  11525941 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 11525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 13150710 - 13150672
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13150710 ttgagcgtaaataggctcacagggcatcaagccctcaac 13150672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 17017795 - 17017749
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  17017795 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 17017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 11393606 - 11393565
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  11393606 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 11393565  T

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Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 11972339 - 11972380
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  11972339 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 11972380  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 14183692 - 14183655
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaa 268  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14183692 ttgagcgtaaataggctcacagggcatcaagccctcaa 14183655  T

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Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 14949441 - 14949400
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  14949441 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 14949400  T

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Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 15377032 - 15376991
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  15377032 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 15376991  T

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Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 16409902 - 16409943
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  16409902 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 16409943  T

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Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 18427375 - 18427416
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  18427375 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 18427416  T

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Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 18456688 - 18456647
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  18456688 tttgagcgtaaataggctcccagggcatcaaggcctcaactt 18456647  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 20385442 - 20385401
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  20385442 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 20385401  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 21189914 - 21189873
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  21189914 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 21189873  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24702081 - 24702122
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24702081 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24702122  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24704531 - 24704572
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24704531 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24704572  T

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Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 27216703 - 27216744
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  27216703 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 27216744  T

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Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 29329196 - 29329155
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  29329196 tttgagcgtaaataggctcctagagcatcaagccctcaactt 29329155  T

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Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 32125334 - 32125375
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  32125334 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 32125375  T

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Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 41522760 - 41522801
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  41522760 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 41522801  T

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Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 41525222 - 41525263
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  41525222 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 41525263  T

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Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 9390228 - 9390184
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  9390228 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 9390184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 13150668 - 13150628
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  13150668 ttgagcgtaaataggctcacatggcatcaagccctcaactt 13150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 26356278 - 26356238
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaact 270  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  26356278 tttgagcgtaaaaaggctcacagggcatcaagccctcaact 26356238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 26358730 - 26358690
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaact 270  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  26358730 tttgagcgtaaaaaggctcacagggcatcaagccctcaact 26358690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 32434721 - 32434681
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  32434721 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 32434681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 36686332 - 36686292
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  36686332 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 36686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 48811757 - 48811797
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  48811757 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 48811797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 181; Significance: 8e-98; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 12741995 - 12742183
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12741995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 12742094  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12742095 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 12742183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 1541395 - 1541210
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1541395 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 1541296  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctccc 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1541295 aatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctccc 1541210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 33861464 - 33861660
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33861464 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33861563  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33861564 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 33861660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 26925132 - 26924936
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  26925132 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 26925033  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26925032 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 26924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 18335085 - 18334888
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18335085 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18334986  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18334985 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 18334888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 19004715 - 19004912
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  19004715 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 19004814  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19004815 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 19004912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 24422216 - 24422413
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  24422216 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24422315  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24422316 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 33863947 - 33864144
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33863947 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33864046  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33864047 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 33864144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 8054698 - 8054893
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  8054698 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 8054797  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctccca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8054798 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctccca 8054893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 2291673 - 2291476
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  2291673 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 2291574  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  2291573 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctctcagg 2291476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 22781941 - 22782120
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  22781941 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 22782040  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22782041 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagc 22782120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 136 - 297
Target Start/End: Complemental strand, 19859378 - 19859215
Alignment:
Q  136 atttaacaacttaacaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 234  Q
    ||||| |||||| |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19859378 atttatcaacttgacaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 19859279  T
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    || |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  19859278 agtgtaaatagactcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 19859215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 25591249 - 25591120
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||    
T  25591249 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaatttgataacttgacaactcgacaacttaacctcttgactatgcaactt 25591150  T
Q  201 aatcttctaatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||||||||||    
T  25591149 aatcttctaatcatgcatgtggtaccaatc 25591120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 25688245 - 25688358
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||| ||||||||||||    
T  25688245 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaa--------cttgactatgccacttaatcttct 25688336  T
Q  209 aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||    
T  25688337 aatcatgcatgtggtaccaatc 25688358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 25656472 - 25656528
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 165  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25656472 agaataacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 25656528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 1595349 - 1595415
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1595349 tttgagcgtaaataggctctcagggcatcaagccctcaactt-atttgagcgtaaaaaggctcccagg 1595415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 25714170 - 25714233
Alignment:
Q  167 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25714170 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25714233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 25656524 - 25656569
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25656524 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25656569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 25714136 - 25714192
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 165  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  25714136 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgacaacttga 25714192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 16448847 - 16448783
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||||||  ||||||||||    
T  16448847 gagcgtaaataggctcccaaggcatcaagccctcaactttatttgaccgtaaataggctcccagg 16448783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 20557255 - 20557189
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||  ||||||||||    
T  20557255 tttgagcgtaaataggctcccagggcatcaagcccttaac-ttatttgagcgtaaataggctcccagg 20557189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 25714257 - 25714323
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||  ||||||||||    
T  25714257 tttgagcgtaaataggctcccagagcatcaaaccctcaac-ttatttgagcgtaaataggctcccagg 25714323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 17230031 - 17229985
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17230031 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 17742939 - 17742985
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17742939 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17742985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 25688382 - 25688424
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttt 272  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  25688382 tttgagcgtaaataggctcccagggcatcaagccctcaacttt 25688424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 25714300 - 25714342
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttt 272  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  25714300 tttgagcgtaaataggctcccagggcatcaagccctcaacttt 25714342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 20557212 - 20557171
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20557212 tttgagcgtaaataggctcccagggcatcaagccctcaactt 20557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 20136415 - 20136459
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  20136415 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 20136459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 22196454 - 22196410
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  22196454 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 22196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 16448806 - 16448763
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  16448806 tttgaccgtaaataggctcccagggcatcaagccctcaacttta 16448763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 16492893 - 16492938
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16492893 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 16492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 18896685 - 18896640
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  18896685 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 18896640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 27573411 - 27573358
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaa 285  Q
    ||||||||||||||||||| |||||||||| |||||||| || ||||||||||||    
T  27573411 ttgagcgtaaataggctcctagggcatcaaaccctcaac-ttctttgagcgtaaa 27573358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 35007894 - 35007939
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  35007894 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 35007939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 1595392 - 1595433
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  1595392 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 1595433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 12742160 - 12742201
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  12742160 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 12742201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 17743009 - 17743057
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  17743009 ttgagcgtaaataggctcctagagcatcaagccctcaac-ttatttgagc 17743057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 18334911 - 18334870
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  18334911 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 18334870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 19004889 - 19004930
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  19004889 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 19004930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 19859238 - 19859197
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  19859238 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 19859197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24422390 - 24422431
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24422390 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 26924959 - 26924918
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  26924959 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 26924918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 33861637 - 33861678
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  33861637 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 33861678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 33864121 - 33864162
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  33864121 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 33864162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 16133768 - 16133728
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  16133768 ttgagagtaaataggctcacagggcatcaagccctcaactt 16133728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 18178048 - 18178001
Alignment:
Q  185 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  18178048 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 18178001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 19444378 - 19444338
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  19444378 ttgagtgtaaataggctcacagggcatcaagccctcaactt 19444338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 23017287 - 23017247
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  23017287 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 23017247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 27573371 - 27573320
Alignment:
Q  229 tctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||| || | ||||||||||||||||||| ||||||||||    
T  27573371 tctttgagcgtaaatagacttctagggcatcaagccctcaac-ttatttgagc 27573320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 571074 - 571263
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571074 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 571173  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  571174 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 571263  T

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Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 24906125 - 24905929
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24906125 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24906026  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24906025 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24905929  T

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Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 24908600 - 24908404
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24908600 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24908501  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24908500 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24908404  T

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Target: chr2; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 26507529 - 26507723
Alignment:
Q  111 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26507529 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26507628  T
Q  203 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26507629 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 26507723  T

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Target: chr2; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 24901171 - 24900975
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24901171 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24901072  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24901071 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 24903648 - 24903452
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24903648 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24903549  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24903548 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 24903452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 114 - 297
Target Start/End: Original strand, 23135265 - 23135456
Alignment:
Q  114 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaatct 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  23135265 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatct 23135364  T
Q  206 tctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23135365 tctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 23135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 18808612 - 18808809
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  18808612 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18808711  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18808712 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 18808809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 23710025 - 23709828
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  23710025 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23709926  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23709925 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 23709828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 26505051 - 26505245
Alignment:
Q  111 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 202  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26505051 aatcgcagttttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26505150  T
Q  203 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26505151 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 26505245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 32039983 - 32039794
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  32039983 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacctgacaacttaacctcttgactatgcaacttaatcttct 32039884  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32039883 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 32039794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 109 - 293
Target Start/End: Original strand, 39681983 - 39682175
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||    
T  39681983 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacctgataacttgacaacttgacaacttaacctcttgactatgcaactt 39682082  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39682083 aatcttctaatcatgcatgtggtatcaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcc 39682175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 24898696 - 24898492
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt----------------aacctcttgacta 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||    
T  24898696 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttgacaacttaacctcttgacta 24898597  T
Q  193 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctc 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24898596 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctc 24898497  T
Q  293 ccagg 297  Q
    |||||    
T  24898496 ccagg 24898492  T

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Target: chr2; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 34402992 - 34402872
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34402992 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 34402893  T
Q  209 aatcatgcatgtggtaccaat 229  Q
    |||||||||||||||||||||    
T  34402892 aatcatgcatgtggtaccaat 34402872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 45030308 - 45030150
Alignment:
Q  141 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 239  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45030308 acaacttatcaactcgacaacttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 45030209  T
Q  240 aaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||    
T  45030208 aaataggctcccagggcatcaagctctcaactttatttgagcgtaaaaaggatcccagg 45030150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 297
Target Start/End: Original strand, 28576852 - 28576965
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  28576852 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgttaataggctcccagggcatcaagccctcaactttatttgagcgta 28576951  T
Q  284 aaacggctcccagg 297  Q
    ||| ||||||||||    
T  28576952 aaaaggctcccagg 28576965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 23130547 - 23130674
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23130547 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23130646  T
Q  201 aatcttctaatcatgcatgtggtaccaat 229  Q
    |  | ||| || |||||||||||||||||    
T  23130647 agacctcttat-atgcatgtggtaccaat 23130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 23133014 - 23133141
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23133014 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23133113  T
Q  201 aatcttctaatcatgcatgtggtaccaat 229  Q
    |  | ||| || |||||||||||||||||    
T  23133114 agacctcttat-atgcatgtggtaccaat 23133141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 24530022 - 24529917
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  24530022 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 24529939  T
Q  209 aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||    
T  24529938 aatcatgcatgtggtaccaatc 24529917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 24367578 - 24367628
Alignment:
Q  235 agcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24367578 agcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaa 24367628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 23712375 - 23712309
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23712375 tttgagcgtaaataggctcccagggcatcaagccctcaactt-atttgagcgtaaaaaggctcccagg 23712309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 24529893 - 24529838
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24529893 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaa 24529838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 21155422 - 21155358
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctccca 295  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  21155422 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaaaaggctccca 21155358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24367617 - 24367657
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24367617 tttgagcgtaaataggctccagggcatcaagccctcaactt 24367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 24643306 - 24643247
Alignment:
Q  238 gtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24643306 gtaaataggctcccagggcatcaagccctcaactt-atttgagcgtaaaaaggctcccagg 24643247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 6725795 - 6725861
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  6725795 tttgagcgtaaataggctcccaggacatcaagccctcaac-ttatttgagcgtaaaaaggctctcagg 6725861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 18547323 - 18547277
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18547323 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 18547277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 34136683 - 34136729
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  34136683 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 34136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 43947705 - 43947659
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43947705 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 43947659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 9974845 - 9974885
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  9974845 ttgagcgtaaataggctcacagggcatcaagccctcaactt 9974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 19202336 - 19202296
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  19202336 ttgagcgtaaataggctcacagggcatcaagccctcaactt 19202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 24435973 - 24436013
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24435973 ttgagcgtaaataggctcacagggcatcaagccctcaactt 24436013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 24781995 - 24781955
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24781995 ttgagcgtaaataggctcacagggcatcaagccctcaactt 24781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 5032454 - 5032416
Alignment:
Q  232 ttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5032454 ttgagcgtaaataggctc-agggcatcaagccctcaactt 5032416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 5032496 - 5032458
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5032496 ttgagcgtaaataggctcacagggcatcaagccctcaac 5032458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 571240 - 571281
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  571240 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 571281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 6725838 - 6725879
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  6725838 tttgagcgtaaaaaggctctcagggcatcaagccctcaactt 6725879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 18808786 - 18808827
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  18808786 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 18808827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 19202268 - 19202231
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19202268 agcgtaaataggctcacagggcatcaagccctcaactt 19202231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 22500805 - 22500842
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22500805 agcgtaaataggctcacagggcatcaagccctcaactt 22500842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 22508739 - 22508776
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22508739 agcgtaaataggctcacagggcatcaagccctcaactt 22508776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 23135433 - 23135474
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  23135433 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 23135474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 23709851 - 23709810
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  23709851 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 23709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 23712332 - 23712291
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  23712332 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 23712291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 24865783 - 24865746
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24865783 agcgtaaataggctcacagggcatcaagccctcaactt 24865746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24898515 - 24898474
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24898515 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24898474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24900998 - 24900957
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24900998 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24903475 - 24903434
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24903475 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24903434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24905952 - 24905911
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24905952 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24905911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24908427 - 24908386
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  24908427 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 24908386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 26505222 - 26505263
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  26505222 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 26505263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 26507700 - 26507741
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  26507700 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 26507741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 28576942 - 28576983
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  28576942 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 28576983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 32039817 - 32039776
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  32039817 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 32039776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 39682156 - 39682197
Alignment:
Q  231 tttgagcgtaaataggctcca-gggcatcaagccctcaactt 271  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  39682156 tttgagcgtaaaaaggctccaagggcatcaagccctcaactt 39682197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 39828333 - 39828288
Alignment:
Q  186 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||    
T  39828333 ttgactatgcaacttaattctcttaatcatgcatgtggtaccaatc 39828288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 6478382 - 6478342
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  6478382 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 6478342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 23969680 - 23969640
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  23969680 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 23969640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 23594220 - 23594031
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23594220 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 23594121  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23594120 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 23594031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 21923784 - 21923587
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21923784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21923685  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21923684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 21923587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 109 - 293
Target Start/End: Complemental strand, 21475572 - 21475387
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21475572 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 21475473  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  21475472 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcc 21475387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 13988579 - 13988750
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13988579 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13988678  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13988679 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctcaactt 13988750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 41372783 - 41372907
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41372783 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctattgactatgcaacttaatcttct 41372882  T
Q  209 aatcatgcatgtggtaccaatcttt 233  Q
    |||||||||||||||||||||||||    
T  41372883 aatcatgcatgtggtaccaatcttt 41372907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 31612111 - 31612178
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  31612111 tttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 31612178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 40388996 - 40389060
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  40388996 gagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 40389060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 21711549 - 21711612
Alignment:
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||    
T  21711549 agcgtaaataggcacccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 21711612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 22123430 - 22123364
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  22123430 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaataggctcccagg 22123364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 29297937 - 29298003
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  29297937 tttgagcgtaaataggctcacagggcatcaagccctcaac-ttatttgagcataaaaaggctcccagg 29298003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 21707007 - 21707068
Alignment:
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctccca 295  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||    
T  21707007 agcgtaaataggcacccagggcatcaagccctcaactttatttgagcgtaaataggctccca 21707068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 21711589 - 21711632
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  21711589 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 21711632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 27161821 - 27161759
Alignment:
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||||  ||||||||||    
T  27161821 agcgtaaataggctcccagggcatcaaaccctcaactt-atttgagcgtaaataggctcccagg 27161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 40389037 - 40389080
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  40389037 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 40389080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 20316158 - 20316204
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20316158 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 20316204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 21043659 - 21043613
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21043659 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 21043613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22118556 - 22118602
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22118556 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22118602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 48520036 - 48520082
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48520036 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 48520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 431559 - 431607
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  431559 ttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagc 431607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 22123387 - 22123346
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  22123387 tttgagcgtaaataggctcccagggcatcaagccctcaactt 22123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 23967499 - 23967544
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaat 229  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  23967499 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaat 23967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 27161782 - 27161741
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  27161782 tttgagcgtaaataggctcccagggcatcaagccctcaactt 27161741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 35088395 - 35088447
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||| |||||||||||||||||||| |  ||||||||||||    
T  35088395 ttgagcgtaaataggctcacagggcatcaagccctcaacgt--tttgagcgtaaa 35088447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 23967569 - 23967607
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaac 269  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  23967569 ttgagcgtaaataggctcccagggcatcaagccctcaac 23967607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 47190382 - 47190427
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47190382 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 47190427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 52954694 - 52954649
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  52954694 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 52954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 20316228 - 20316276
Alignment:
Q  232 ttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagc 280  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  20316228 ttgagcgtaaataggctcccaaggcatcaagccctcaac-ttatttgagc 20316276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 21475406 - 21475365
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  21475406 tttgagcgtaaaaaggctcctagggcatcaagccctcaactt 21475365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 21923610 - 21923569
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  21923610 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 21923569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 23594054 - 23594013
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  23594054 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 23594013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 31612155 - 31612196
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  31612155 tttgagcgtaaataggctcccagggcatcaaaccctcaactt 31612196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 35088436 - 35088477
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  35088436 tttgagcgtaaataggctcacagggcatcaaaccctcaactt 35088477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 20587650 - 20587690
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  20587650 ttgagcgtaaataggctcacagggcatcaagcccttaactt 20587690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 20592188 - 20592228
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  20592188 ttgagcgtaaataggctcacagggcatcaagcccttaactt 20592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 20634706 - 20634666
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  20634706 ttgagcgtaaataggctcacaggacatcaagccctcaactt 20634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 20957935 - 20957979
Alignment:
Q  187 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||    
T  20957935 tgactctgcaacttattcttcttaatcatgcatgtggtaccaatc 20957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 35982211 - 35982167
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  35982211 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 35982167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 170; Significance: 3e-91; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 13624 - 13813
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcgacttaatcttct 13723  T
Q  209 aatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13724 aatcatgcatgtggtaccaatctttgagcgcaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 13813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 13790 - 13831
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  13790 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 13831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 40070 - 40266
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  40070 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 40169  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40170 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 40266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 40243 - 40284
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  40243 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 40284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 4542865 - 4542669
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  4542865 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 4542766  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4542765 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 4542669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 5853784 - 5853588
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  5853784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 5853685  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5853684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 5853588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 293
Target Start/End: Original strand, 14823444 - 14823636
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  14823444 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14823543  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14823544 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcc 14823636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 1484071 - 1484268
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  1484071 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 1484170  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1484171 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 1484268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 20402896 - 20403093
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20402896 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20402995  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20402996 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 20403093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 22001426 - 22001620
Alignment:
Q  112 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  22001426 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 22001525  T
Q  204 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22001526 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 22001620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 4482981 - 4483093
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  4482981 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 4483072  T
Q  209 aatcatgcatgtggtaccaat 229  Q
    |||||||||||||||||||||    
T  4483073 aatcatgcatgtggtaccaat 4483093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 149 - 271
Target Start/End: Complemental strand, 20046597 - 20046473
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 247  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20046597 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 20046498  T
Q  248 t-ccagggcatcaagccctcaactt 271  Q
    | |||||||||||||||||||||||    
T  20046497 tcccagggcatcaagccctcaactt 20046473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 18678517 - 18678390
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18678517 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18678418  T
Q  201 aatcttctaatcatgcatgtggtaccaat 229  Q
    |  | ||| || |||||||||||||||||    
T  18678417 agacctcttat-atgcatgtggtaccaat 18678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 18717706 - 18717579
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18717706 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18717607  T
Q  201 aatcttctaatcatgcatgtggtaccaat 229  Q
    |  | ||| || |||||||||||||||||    
T  18717606 agacctcttat-atgcatgtggtaccaat 18717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 26225725 - 26225636
Alignment:
Q  141 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 229  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26225725 acaacttaccaactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26225636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 26219445 - 26219534
Alignment:
Q  141 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 229  Q
    |||||||| | |||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26219445 acaacttatccactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26219534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 26225611 - 26225544
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||    
T  26225611 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagggtaaaaaggctaccagg 26225544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 45291058 - 45291003
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45291058 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaa 45291003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 15203593 - 15203529
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctccca 295  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  15203593 tttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaaaaggctccca 15203529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 19896065 - 19896131
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||    
T  19896065 tttgagcgtaaataggctcccagggcatcaagcactcaactt-atttgagcgtaaaaaggctcccagg 19896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 18833248 - 18833301
Alignment:
Q  232 ttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaa 285  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18833248 ttgagcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaa 18833301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 45291014 - 45290974
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactt 271  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  45291014 tttgagcgtaaatagactccagggcatcaagccctcaactt 45290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 37515270 - 37515313
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtacca 227  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  37515270 cttgactatgcaacttaatcttctaaatcatgcatgtggtacca 37515313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 18833179 - 18833225
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18833179 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 18833225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 20502478 - 20502432
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20502478 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 20502432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22253541 - 22253495
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22253541 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 22253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22963789 - 22963743
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22963789 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 28397293 - 28397339
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28397293 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 28397339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 39937142 - 39937102
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  39937142 ttgagcgtaaataggctcgcagggcatcaagccctcaactt 39937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 41597988 - 41598054
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||| |||||||||||| | ||||||||||||||||| |||||||||| ||||  ||||||||||    
T  41597988 tttgagcataaataggctcccatggcatcaagccctcaac-ttatttgagcataaataggctcccagg 41598054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22382110 - 22382064
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||    
T  22382110 cttgactatgcaactttatcttcttaatcatgcatgtgttaccaatc 22382064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22525302 - 22525348
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  22525302 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 22525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22984028 - 22984074
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22984028 cttgactatgcaacttaatcctcttaatcatgcatatggtaccaatc 22984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22995586 - 22995632
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22995586 cttgactatgcaacttaatcctcttaatcatgcatttggtaccaatc 22995632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 1484245 - 1484286
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  1484245 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 1484286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 4542692 - 4542651
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  4542692 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 4542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 5853611 - 5853570
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  5853611 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 5853570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 14823617 - 14823658
Alignment:
Q  231 tttgagcgtaaataggctcca-gggcatcaagccctcaactt 271  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14823617 tttgagcgtaaaaaggctccaagggcatcaagccctcaactt 14823658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 18833290 - 18833331
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  18833290 tttgagcgtaaataggctaccagggcatccagccctcaactt 18833331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 19896108 - 19896149
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  19896108 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 19896149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 20403070 - 20403111
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  20403070 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 20403111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 22001597 - 22001638
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  22001597 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 22001638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 23667670 - 23667714
Alignment:
Q  186 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  23667670 ttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 23667714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 41598031 - 41598072
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  41598031 tttgagcataaataggctcccagggcatcaagccctcaactt 41598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 24713141 - 24713181
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  24713141 ttgagcgtaaataggctcacagggtatcaagccctcaactt 24713181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 7e-86; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 1837996 - 1837805
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaac--ctcttgactatgcaacttaatctt 206  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  1837996 agaatcacagctttaaacaatttcatgatttaacaacttaccaactcgacaacttgacaacttgacaacttaacctctcttgactatgcaacttaatctt 1837897  T
Q  207 ctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1837896 ctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 1837805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 15118845 - 15118648
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15118845 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15118746  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  15118745 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 15118648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 18239912 - 18239715
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18239912 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18239813  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18239812 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 18239715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 44614957 - 44615154
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgac-tatgcaact 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||    
T  44614957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgacctatgcaact 44615056  T
Q  200 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44615057 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 44615154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 50222832 - 50222635
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  50222832 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 50222733  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50222732 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 50222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 109 - 296
Target Start/End: Complemental strand, 14718459 - 14718263
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14718459 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14718360  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccag 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  14718359 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccag 14718263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 12033624 - 12033500
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 12033525  T
Q  209 aatcatgcatgtggtaccaatcttt 233  Q
    |||||||||||||||||||||||||    
T  12033524 aatcatgcatgtggtaccaatcttt 12033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 149 - 293
Target Start/End: Complemental strand, 44773533 - 44773387
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 247  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44773533 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcaagcatgtggtaccaatctttgagcgtaaataggc 44773434  T
Q  248 t-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||    
T  44773433 tcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcc 44773387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 7641609 - 7641478
Alignment:
Q  167 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccct 265  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7641609 aactcgacaacttgacaacttgactatgcaacttaatcttctaacattgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 7641510  T
Q  266 caactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||| ||||||||||    
T  7641509 caactttatttgagcgtaaaaaggctcccagg 7641478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 3514715 - 3514866
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  3514715 agaatcacaactttaaacaatttcatgatttaactacttaacaactcgacaacttgataacttgacaa--------cttgactatgcaacttaatcttct 3514806  T
Q  209 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctc-cagggcatcaagccctc 266  Q
     ||||||||||||||||||| |   |||||||||||||||||| ||| |||||||||||||    
T  3514807 -atcatgcatgtggtaccaaccatattgagcgtaaataggctctcagtgcatcaagccctc 3514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 29267332 - 29267433
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 200  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  29267332 agaatcacagctttaagcaatttcatgatttaactacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29267431  T
Q  201 aa 202  Q
    ||    
T  29267432 aa 29267433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 15355759 - 15355668
Alignment:
Q  141 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 231  Q
    |||||||| ||||||||||| |||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  15355759 acaacttatcaactcgacaatttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 15355668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 18215637 - 18215571
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  18215637 tttgagcgtaaataggctccagggcatcaagccctcaactttatttgagggtaaataggctcccagg 18215571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 54799074 - 54799007
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  54799074 tttgagcgtaaataggctcccagggcatcaaaccctcaactttatttgagcgtaaaaaggctcccagg 54799007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 14280155 - 14280219
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  14280155 gagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 14280219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 8575186 - 8575124
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctc 292  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  8575186 tttgagcgtaaataggctcccagggcatcaaaccctcaactttatttgagcgtaaaaaggctc 8575124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 20149671 - 20149735
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  20149671 gagcgtaaataggctcccagggcatcaagtcctcaactttatttgagcgtaaataggctcccagg 20149735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 52312310 - 52312376
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||| ||||||||||    
T  52312310 tttgagcgtaaataggctcccagagcatcaagccctcaactt-atttgagcgtaaaaaggctcccagg 52312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 29267440 - 29267486
Alignment:
Q  251 agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29267440 agggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 29267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 44102094 - 44102139
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactttatt 275  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44102094 tttgagcgtaaataggctctcagggcatcaagccctcaactttatt 44102139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 14280196 - 14280239
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  14280196 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 14280239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 20149712 - 20149755
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20149712 tttgagcgtaaataggctcccagggcatcaagccctcaacttta 20149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 15791428 - 15791474
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15791428 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 15791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 26045671 - 26045625
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26045671 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 26050852 - 26050806
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26050852 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26050806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 15355645 - 15355604
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15355645 tttgagcgtaaataggctcccagggcatcaagccctcaactt 15355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 1837828 - 1837787
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  1837828 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 1837787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 7641501 - 7641460
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  7641501 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 7641460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 15118671 - 15118630
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  15118671 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 15118630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 18215594 - 18215553
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  18215594 tttgagggtaaataggctcccagggcatcaagccctcaactt 18215553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 18239738 - 18239697
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  18239738 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 18239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 29267463 - 29267504
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  29267463 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 29267504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 44615131 - 44615172
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  44615131 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 44615172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 50222658 - 50222617
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  50222658 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 50222617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 52312353 - 52312394
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  52312353 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 52312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 54799030 - 54798989
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  54799030 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 54798989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 10357529 - 10357489
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  10357529 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 10357489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 15042260 - 15042220
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  15042260 ttgagcgtaaataggctcacagggcatcaatccctcaactt 15042220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 15098938 - 15098982
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  15098938 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 15098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 15112164 - 15112204
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  15112164 ttgagcgtaaataggctcacagggcatcaatccctcaactt 15112204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 15869238 - 15869195
Alignment:
Q  208 taatcatgcatgtggtaccaatc--tttgagcgtaaataggctc 249  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  15869238 taatcatgcatgtggtaccaatcatattgagcgtaaataggctc 15869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 19736381 - 19736425
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 228  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||    
T  19736381 cttgactatgcaactacatcttcttaatcatgcatgtggtaccaa 19736425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 35812569 - 35812529
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  35812569 ttgagcgtaaataggctcacatggcatcaagccctcaactt 35812529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 37491 - 37687
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  37491 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 37590  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  37591 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaaggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 37687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 37664 - 37705
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  37664 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 37705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 160; Significance: 3e-85; HSPs: 9)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 136350 - 136546
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  136350 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 136449  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  136450 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctctcagg 136546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 138819 - 139015
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  138819 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 138918  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  138919 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctctcagg 139015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 143757 - 143953
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  143757 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 143856  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  143857 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctctcagg 143953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 133881 - 134077
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  133881 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 133980  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  133981 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttaagcgtaaaaaggctcccagg 134077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 141288 - 141484
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  141288 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 141387  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  141388 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaaaaggctctcagg 141484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 136523 - 136564
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  136523 tttgagcgtaaaaaggctctcagggcatcaagccctcaactt 136564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 138992 - 139033
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  138992 tttgagcgtaaaaaggctctcagggcatcaagccctcaactt 139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 141461 - 141502
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  141461 tttgagcgtaaaaaggctctcagggcatcaagccctcaactt 141502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 143930 - 143971
Alignment:
Q  231 tttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  143930 tttgagcgtaaaaaggctctcagggcatcaagccctcaactt 143971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 20416 - 20613
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20416 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20515  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20516 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 20613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 20590 - 20631
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  20590 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 20631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 157; Significance: 2e-83; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 94080 - 94277
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  94080 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 94179  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  94180 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 94277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 44254 - 44320
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  44254 tttgagtgtaaataggctcccagggcatcaaggcctcaactt-atttgagcgtaaaaaggctcccagg 44320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 94254 - 94295
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  94254 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 94295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 153; Significance: 4e-81; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 109 - 293
Target Start/End: Original strand, 13061 - 13254
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13061 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13160  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcc 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  13161 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccctcaactttatttgagcgtaaaaaggctcc 13254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 13235 - 13276
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  13235 tttgagcgtaaaaaggctcctagggcatcaagccctcaactt 13276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 141; Significance: 6e-74; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 9418 - 9614
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||    
T  9418 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaactt 9517  T
Q  201 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  9518 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccctc-actttatttgagcgtaaataggctcccagg 9614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 9591 - 9632
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9591 tttgagcgtaaataggctcccagggcatcaagccctcaactt 9632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 158924 - 158795
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  158924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaactt 158825  T
Q  201 aatcttctaatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||||||||||||||||    
T  158824 aatcttctaatcatgcatgtggtaccaatc 158795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 158770 - 158729
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  158770 tttgagcgtaaataggctcccaaggcatcaagccctcaactt 158729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 4393 - 4553
Alignment:
Q  109 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 208  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||  |||||| |||||||||||||||||    
T  4393 agaatcacaactttaaaaaatttcatgatttaactacttaacaactcgacaacttgacaacttgataacttgacaacttgacaatgcaacttaatcttct 4492  T
Q  209 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctc-cagggcatcaagccctc 266  Q
    |||||||||||||||||||| |   |||||||||||||||||| ||| |||| ||||||||    
T  4493 aatcatgcatgtggtaccaaccatattgagcgtaaataggctctcagagcattaagccctc 4553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 116265 - 116332
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  116265 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 116332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 116154 - 116236
Alignment:
Q  149 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||| ||||| ||||| ||||  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  116154 acaacttgacaatcttgacaactcaacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 116236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 30137 - 30204
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  30137 tttgagcgtaaataggctcccagggcatcaagccctcaactttatttgagcgtaaaaaggctcccagg 30204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 30181 - 30222
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  30181 tttgagcgtaaaaaggctcccagggcatcaagccctcaactt 30222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 4052 - 4106
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4052 tttgagcgtaaataggctccagggcatcaagccctcaactttatttgagcgtaaa 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 4095 - 4133
Alignment:
Q  231 tttgagcgtaaataggctccagggcatcaagccctcaac 269  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4095 tttgagcgtaaataggctccagggcatcaagcccccaac 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 45027 - 44960
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  45027 tttgagcgtaaataggctcccagggcatcaagcccacaactttatttgagcgtaaaaaggctcccagg 44960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 16620 - 16687
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  16620 tttgagcataaataggctcccagggcatcaagccctcaactttatttgagcgtaaataggctcccagg 16687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 16577 - 16643
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||  ||||||||||    
T  16577 tttgagcgtaaataggctcccagggcatcaagcc-tcaactttatttgagcataaataggctcccagg 16643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 16664 - 16709
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactttatt 275  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  16664 tttgagcgtaaataggctcccagggcatcaagccctcaactttatt 16709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 6406 - 6468
Alignment:
Q  235 agcgtaaataggctcc-agggcatcaagccctcaactttatttgagcgtaaaacggctcccagg 297  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  6406 agcgtaaataggctcccagggcatcaagccctcaac-ttatttgagcgtaaaaaggctcccagg 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 3041 - 2995
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3041 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 2995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 9915 - 9961
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9915 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 1637 - 1683
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1637 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 8633 - 8679
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8633 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 17247 - 17293
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17247 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 17293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 9677 - 9738
Alignment:
Q  208 taatcatgcatgtggtaccaatc--tttgagcgtaaataggctc-cagggcatcaagccctc 266  Q
    |||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||||||    
T  9677 taatcatgcatgtggtaccaatcatattgagcgtaaataggctctcagagcatcaagccctc 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 10882 - 10928
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10882 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaatc 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 104006 - 103962
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  104006 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 38492 - 38446
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  38492 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 38446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 6758 - 6804
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  6758 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 394 - 436
Alignment:
Q  189 actatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  394 actatgcaacttattcttcttaatcatgcatgtggtaccaatc 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 497206 - 497252
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  497206 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 497252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 76671 - 76711
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  76671 ttgagcgtaaatatgctcacagggcatcaagccctcaactt 76711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 15514 - 15473
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaactt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15514 tttgagcgtaaataggctcccagggcatcaagccctcaactt 15473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 9434 - 9394
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  9434 ttgagcgtaaataggctcacagggcatcaagccctcaactt 9394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 2803 - 2843
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  2803 ttgagcgtaaataggctcacagggcatcaagccctcaactt 2843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 7234 - 7274
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  7234 ttgagcgtaaataggctcacagggcatcaagccctcaactt 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 14353 - 14393
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  14353 ttgagcgtaaataggctcacagggcatcaagccctcaactt 14393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 14421 - 14458
Alignment:
Q  235 agcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14421 agcgtaaataggctcacagggcatcaagccctcaactt 14458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 1557 - 1517
Alignment:
Q  234 gagcgtaaataggctcc-agggcatcaagccctcaacttta 273  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1557 gagcgtaaataggctcccagggcatcaagccctcaacttta 1517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 57720 - 57760
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  57720 ttgagcgtaaataggctcacagggcatcaagccctcaactt 57760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 78006 - 78046
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  78006 ttgagcgtaaataggctcacagggcatcaagccctcaactt 78046  T

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Target: scaffold0394 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 11863 - 11917
Alignment:
Q  231 tttgagcgtaaataggct-ccagggcatcaagccctcaactttatttgagcgtaaa 285  Q
    |||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||    
T  11863 tttgagcgtaaataggctcccaaggcaacaagccctcaac-ttatttgagcgtaaa 11917  T

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Target: scaffold0282 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 12049 - 12002
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 231  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12049 cttgactatgcaactttatcttcttaatcatgcacgtggtaccaatct 12002  T

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Target: scaffold0914 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 1444 - 1490
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  1444 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 1490  T

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Target: scaffold0737 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 6778 - 6740
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6778 ttgagcgtaaataggctcacagggcatcaagccctcaac 6740  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 2149 - 2195
Alignment:
Q  185 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||    
T  2149 cttgactatgcaacttaatcctcttaatcatgcatgtggtagcaatc 2195  T

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Target: scaffold0278 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 10850 - 10805
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10850 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 10805  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 8824 - 8767
Alignment:
Q  208 taatcatgcatgtggtaccaatc--tttgagcgtaaataggct-ccagggcatcaagc 262  Q
    |||||||||||||||||||||||   ||||||||||||||||| |||| |||||||||    
T  8824 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcccagagcatcaagc 8767  T

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Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 52286 - 52248
Alignment:
Q  231 tttgagcgtaaataggctcc-agggcatcaagccctcaa 268  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  52286 tttgagcgtaaataggctcccagggcatcaagccctcaa 52248  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 19551 - 19513
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19551 ttgagcgtaaataggctcacagggcatcaagccctcaac 19513  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 78484 - 78446
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaac 269  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  78484 ttgagcgtaaataggctcacagggcatcaagccctcaac 78446  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 106064 - 106110
Alignment:
Q  185 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  106064 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 106110  T

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Target: scaffold0413 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 12314 - 12358
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  12314 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 12358  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 136759 - 136715
Alignment:
Q  185 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  136759 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 136715  T

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Target: scaffold1633 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 174 - 214
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  174 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 214  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 733 - 693
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  733 ttgagcataaataggctcacagggcatcaagccctcaactt 693  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 41321 - 41281
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  41321 ttgagcgtaaataggctcacagggcatcaaaccctcaactt 41281  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 59685 - 59645
Alignment:
Q  232 ttgagcgtaaataggctc-cagggcatcaagccctcaactt 271  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  59685 ttgagcgtaaataggctcacagggcataaagccctcaactt 59645  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 816 - 769
Alignment:
Q  185 cttgactatgcaacttaatcttc--taatcatgcatgtggtaccaatc 230  Q
    |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  816 cttgactatgcaactttatcttccttaatcatgcaagtggtaccaatc 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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