View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7894_low_30 (Length: 311)
Name: NF7894_low_30
Description: NF7894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7894_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 13 - 292
Target Start/End: Original strand, 45500642 - 45500920
Alignment:
| Q |
13 |
aatatcgtaatagacaactttggcattcatttgcttaagctcaacagacataaatccttggccgtcgtagtaaaacttgaccccatctctcctattttta |
112 |
Q |
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| T |
45500642 |
aatatcgtaatagacaactttggcattcatttgcttaagctcaacagacataaatccttgtccgtcatagtaaaacttgaccccatctctcctattttta |
45500741 |
T |
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| Q |
113 |
tcaacgtctcctttccatgcctttgagcctccaccactagtcaagaactgcatttggctgcaaagccactcaaatttcattaaggtgatattgatgattc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
45500742 |
tcaacgtctcctttccatgcctttgagcctccaccactagtcaagaactgcatttggctgcaaagccact-aaatttcattaaggtgatattgatgattc |
45500840 |
T |
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| Q |
213 |
agtaaactaacaatcaaacaagtccaatttaaatcaaggtaatatatagacctacctgtcggtgctacttatgtgttcca |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45500841 |
agtaaactaacaatcaaacaagtccaatttaaatcaaggtaatatatagacctacctgtcggtgctacttatgtgttcca |
45500920 |
T |
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